BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 002602
         (902 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1028

 Score = 1104 bits (2856), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 552/904 (61%), Positives = 681/904 (75%), Gaps = 24/904 (2%)

Query: 12  RDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIP 71
           RD  QA+  +KKG YLLKYGR GKPKFCPFRLS+DE+ LIWYAGK EKQLKLSHVS+I+P
Sbjct: 13  RDILQAITAIKKGAYLLKYGRWGKPKFCPFRLSNDERFLIWYAGKLEKQLKLSHVSKIMP 72

Query: 72  GQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDNRCKSRS 131
           GQ TA+FQRYPQPEKEYQSFSLIY NRSLD+ICKDK EAE+W  ALRALIS+++ CK   
Sbjct: 73  GQHTAIFQRYPQPEKEYQSFSLIYSNRSLDVICKDKVEAEVWIVALRALISQNSCCKRIG 132

Query: 132 DSIS-SDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLS 190
           D  S ++SPRSH +K+S S+VS  SSD+  KD  DT PILV YE SPQNRLGKAFSEVLS
Sbjct: 133 DPQSDANSPRSHARKSSLSNVSCTSSDIIYKDPEDTHPILVPYETSPQNRLGKAFSEVLS 192

Query: 191 FTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFD 250
           FTAAAKAYT+AESV++SL+ ++SG  DDANS SS  D+FR S SSAVSSS   S HED D
Sbjct: 193 FTAAAKAYTQAESVARSLSNLSSGISDDANSHSSAVDAFRNSSSSAVSSSGYVSSHEDVD 252

Query: 251 GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
           G GDV   GEG+ N  LGG +  V+ S   R DALLPK L+    LDAQ IACGSKHAV+
Sbjct: 253 GPGDVLFLGEGISNLPLGGNMYDVKSSPIMRMDALLPKALDRIAALDAQIIACGSKHAVI 312

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           VTKQGQIFSWGE SGGKLGHG +ADVS PK+IDAL+ SN+ +VACGEFHTCAVT+SG+LY
Sbjct: 313 VTKQGQIFSWGESSGGKLGHGADADVSQPKVIDALSESNVVLVACGEFHTCAVTVSGNLY 372

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           TWGD  HN G LG  S +SHWIPR+V GQ+E ++IS + CGPWHTAA++S GKLFTFGDG
Sbjct: 373 TWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRISFVSCGPWHTAAVSSQGKLFTFGDG 432

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
           TFGALGHGDRSSTS PREVE+LK L+T+  SCG+WHTAA+++   ++   +   S KLFT
Sbjct: 433 TFGALGHGDRSSTSKPREVESLKGLRTLKVSCGIWHTAAVIDFINESDRLDTSLSGKLFT 492

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG G  GQLGHGD EPR+VP CV +   +  C+VAC HS+TIALT  GQV++MG+ADYGQ
Sbjct: 493 WGAGERGQLGHGDEEPRLVPSCVSMPAGV--CQVACAHSMTIALTVLGQVYTMGAADYGQ 550

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LGSP S GK P   +G+I++ +I+ IACGS+H+  +SS  +VYTWGKG NGQLGHGD ++
Sbjct: 551 LGSPCSVGKLPIHTDGDIRNCHIKQIACGSHHVVALSSNGDVYTWGKGINGQLGHGDIKD 610

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYN 670
           + TPTLV+AL+ KQVKSVVCGSNFTA IC HK VS AD SICSGC N FNFRR+RHNCYN
Sbjct: 611 RHTPTLVKALKHKQVKSVVCGSNFTAVICPHKCVSSADQSICSGCHNPFNFRRKRHNCYN 670

Query: 671 CGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRNSSG-LFQN 729
           CGL++CK CSSK+S+K ALAP +NKP RVCD+CF KL T  E G   Q+P++  G L  N
Sbjct: 671 CGLLFCKACSSKRSLKAALAPNVNKPSRVCDECFAKLTTAMEDGPKLQVPKSCRGSLHYN 730

Query: 730 CKRVTEKENMNS-------------------RSATDGQSKPKGKSYHASPSLNGKFQWEP 770
           CK + E E++ S                   R  +    K +    H SP+  G  +WE 
Sbjct: 731 CKEIAEAESITSNPSHQHCRLSSLDSFKQALRQNSQHNKKAESCQCHVSPTQIGSLEWEL 790

Query: 771 NSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSI-TMNSFTDLANSEVIFEYSKQTN 829
             ++    ++SAS PGS  +SRA SP+SR+SS   S+ + +SF + A++E++ + SKQ N
Sbjct: 791 TYEYEDLGEMSASDPGSGMLSRATSPVSRRSSQEHSLRSASSFNNFAHAELLPDNSKQRN 850

Query: 830 DNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLT 889
           ++ +QE  +LR Q+ DLT +S+ LE +++RTSR+LKE T+  ++E+EKNK A+E+IRSLT
Sbjct: 851 ESLSQEILLLRGQVPDLTHRSRVLEADIDRTSRQLKEATETVKKESEKNKVAKEIIRSLT 910

Query: 890 AQAR 893
           AQ +
Sbjct: 911 AQLK 914


>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
          Length = 1047

 Score = 1102 bits (2850), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 573/929 (61%), Positives = 704/929 (75%), Gaps = 44/929 (4%)

Query: 1   MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ 60
           MA  Q+N L ERD EQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIWY+GKEEKQ
Sbjct: 1   MADPQRNGLAERDVEQAIVALKKGAYLLKYGRRGKPKFCPFRLSNDESMLIWYSGKEEKQ 60

Query: 61  LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRAL 120
           LKL++VSRIIPGQRT +FQRYP+PEKEYQSFSLIY +RSLDLICKDKDEAE+WF  L+ L
Sbjct: 61  LKLNNVSRIIPGQRTPIFQRYPRPEKEYQSFSLIYGDRSLDLICKDKDEAEVWFIGLKGL 120

Query: 121 ISEDN----RCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENS 176
           IS  N    R + R DSISS+SP S  ++ SPS        L++ D GDTQ   V +EN 
Sbjct: 121 ISRGNYRKWRSEIRDDSISSESPHSRARRISPS--------LSSSDPGDTQQTQVTFENI 172

Query: 177 PQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSA 236
           PQ+ LGKAFS+V+S+TA+ K++T+AESV+ SL+ ++SGG+D++N R+S +++FR+SLSSA
Sbjct: 173 PQSGLGKAFSDVISYTASTKSFTQAESVASSLSSLSSGGVDNSNGRTSASENFRVSLSSA 232

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           VSSSSQGS H+DFD LGDVF+WGEG+G+G++G  V+ V  SS+ + DALLPK LESTVVL
Sbjct: 233 VSSSSQGSGHDDFDALGDVFMWGEGIGDGIMGAGVHRVGSSSSTKIDALLPKALESTVVL 292

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG 356
           D  SIACG KHAVLVTK+G++FSWGE  G +LGHGVE DVS+PKLIDAL G NI +VACG
Sbjct: 293 DVHSIACGGKHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACG 352

Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
           E+H+CAVTLSGDLYTWGDG HN GLLG  SE SHWIP+KVSG MEG+ +S + CGPWHTA
Sbjct: 353 EYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVSGPMEGMHVSYVACGPWHTA 412

Query: 417 AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV--- 473
            +TSAG+LFTFGDGTFGALGHGD SS S+PREVE L+  +T+  +CGVWHTAA+VE+   
Sbjct: 413 VVTSAGQLFTFGDGTFGALGHGDHSSMSIPREVEALRGQRTMRVACGVWHTAAVVELMIA 472

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
           +     S   SS KLFTWGDG +G+LGHGD EPR+VP  V    + SFC+VACGH++++A
Sbjct: 473 SSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALINESFCQVACGHNLSVA 532

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
           LT +G+V++MGSA YGQLGSP + GK PT +EG I + ++E++ACGSYH+AV++SK+EVY
Sbjct: 533 LTTSGRVYTMGSAVYGQLGSPVADGKIPTLVEGKIANSFVEEVACGSYHVAVLTSKTEVY 592

Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICS 653
           TWGKG NGQLGHGDN+++ TPTLV+ L+DKQVK+VVCG NFTAAI LHK VS ADHSICS
Sbjct: 593 TWGKGTNGQLGHGDNDHRNTPTLVDFLKDKQVKNVVCGLNFTAAISLHKWVSCADHSICS 652

Query: 654 GCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSES 713
           GC NQF FRR+RHNCYNCGLV+C  CSS+KS+K +LAP +NKPYRVCDDCF KL    ES
Sbjct: 653 GCHNQFGFRRKRHNCYNCGLVFCNTCSSRKSLKASLAPNMNKPYRVCDDCFTKLKKAMES 712

Query: 714 GSNSQIPR-NSSGLFQNCKRVTEKENMNSR--------SATDGQSKPKGKSY-------- 756
           GS  +IP+  SS + Q    + E++ M  R        S+ D  S+ + K Y        
Sbjct: 713 GSVLRIPKARSSNILQKSNEIAERDTMGPRVQGQLSRLSSVDSFSRAESKHYKCDTKLEF 772

Query: 757 ---HASPSLNGKFQWE-------PNSDFIKSNKI-SASPPGSRRVSRAPSPISRKSSPAC 805
                SP LNG  Q          NS F  S KI SAS PGSR VSRA SP+S KSSP  
Sbjct: 773 NDARVSPHLNGNVQRGSFHSSKLSNSLFGGSRKIFSASRPGSRIVSRATSPVSGKSSPPQ 832

Query: 806 SITM-NSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKL 864
           S  +  S   + + E   +  K TND+ ++E   LRAQ+E+LT KSQ LE ELER+SRKL
Sbjct: 833 SAMLAASLAVVRSPEATDDDPKHTNDSLSREIINLRAQVENLTGKSQILEAELERSSRKL 892

Query: 865 KETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
           KE T +A+ EAEK KAA+EVI+SLTAQ +
Sbjct: 893 KEVTAVAEGEAEKCKAAKEVIKSLTAQLK 921


>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
           vinifera]
          Length = 1107

 Score = 1019 bits (2636), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 529/920 (57%), Positives = 679/920 (73%), Gaps = 37/920 (4%)

Query: 11  ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
           ERDTEQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEEK LKLSHVSRII
Sbjct: 18  ERDTEQALTALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKLLKLSHVSRII 77

Query: 71  PGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN----- 125
            GQRT +FQRYP+PEKEYQSFSLIY +RSLDLICKDKDEAE+WF+ L+ALIS        
Sbjct: 78  SGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALISRGGHHRKW 137

Query: 126 RCKSRSDSISSD--SPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           R +SRSD I S+  SPR++T+++SP +    S+D   KD GD   +   YE+ P++ + K
Sbjct: 138 RTESRSDGIPSEANSPRTYTRRSSPLNSPFGSADSLQKDGGDHLRLHSPYESPPKSVMEK 197

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANS--RSSTADSFRISLSSAVSSSS 241
           AFS+V+ +    K +  ++S S S++ ++SGG D  +   ++ T D+FR+SLSSAVSSSS
Sbjct: 198 AFSDVILYAVPPKGFFPSDSASGSVHSLSSGGSDSVHGHMKAMTMDAFRVSLSSAVSSSS 257

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
           QGS H+D D LGDVFIWGEG G+G+LGG  + V      + D+LLPK LES VVLD Q+I
Sbjct: 258 QGSGHDDGDALGDVFIWGEGTGDGVLGGGSHRVGSCFGMKMDSLLPKALESAVVLDVQNI 317

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           ACG +HA LVTKQG+IFSWGE SGG+LGHGV++DV +PKLID+L+ +NI +VACGE+HTC
Sbjct: 318 ACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDSLSNTNIELVACGEYHTC 377

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AVTLSGDLYTWGDG +N GLLG  +E+SHW+P++V+G +EG+ +SSI CGPWHTA +TS+
Sbjct: 378 AVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSS 437

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+LFTFGDGTFG LGHGD  S S PREVE+LK  +TV+++CGVWHTAA+VE+      S+
Sbjct: 438 GQLFTFGDGTFGVLGHGDTKSVSKPREVESLKGHRTVISACGVWHTAAVVEIMVGNPSSS 497

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             SS KLFTWGDG +G+LGHGD E ++VP CV    D +FC+VACGHS+T+ALT +G V+
Sbjct: 498 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVDPNFCRVACGHSLTVALTTSGHVY 557

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           +MGS  YGQLG+P + GK PTR+EG +   ++E+IACG+YH+AV++S++EVYTWGKGANG
Sbjct: 558 TMGSPVYGQLGNPQADGKLPTRVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGANG 617

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           +LGHGD +++ +PTLVEAL+DKQVKS+ CG+NFTA ICLHK VS  D S+CSGCR  FNF
Sbjct: 618 RLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTATICLHKWVSGVDQSMCSGCRLPFNF 677

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPR 721
           +R+RHNCYNCGLV+C  CSSKKS+K ++AP  NKPYRVCD+CF KL    E+ ++SQ   
Sbjct: 678 KRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFSKLRKAIETDASSQSAV 737

Query: 722 NSSGLF-QNCKRVTEK-ENMNSRS---------------ATDGQSKPKGK----SYHASP 760
           +  G+  Q    + +K E ++SRS               A    SK   K    S   SP
Sbjct: 738 SRRGVTNQGLNELIDKDEKLDSRSRVQLARFSSMESLKQAESRTSKRNKKLEFNSSRVSP 797

Query: 761 SLNGKFQW-----EPNSDFIKSNK-ISASPPGSRRVSRAPSPISRKSSPACSITMN-SFT 813
             NG  QW       N  F  S K  SAS PGSR VSR  SPISR+ SP  + T   +  
Sbjct: 798 IPNGGSQWGGALKSLNPVFGSSKKFFSASVPGSRIVSRTTSPISRRPSPPRAATPTPTLE 857

Query: 814 DLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQE 873
            L + +++ + +K+TND+ +QE   LR Q+E+LTRK+Q  EVELERT+++LKE   IA E
Sbjct: 858 GLTSPKIVVDDAKRTNDSLSQEVIKLRVQVENLTRKAQLQEVELERTTKQLKEAIAIAGE 917

Query: 874 EAEKNKAAQEVIRSLTAQAR 893
           E  + KAA+EVI+SLTAQ +
Sbjct: 918 ETARCKAAKEVIKSLTAQLK 937


>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101222790 [Cucumis sativus]
          Length = 982

 Score = 1006 bits (2601), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 532/910 (58%), Positives = 660/910 (72%), Gaps = 70/910 (7%)

Query: 1   MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ 60
           MA  Q+  L +RD EQA+  LKKG +LLKYGRRGKPKFCPFRLSSDE LL+WY+GK+EKQ
Sbjct: 1   MADTQKVGLAQRDIEQAIIALKKGAHLLKYGRRGKPKFCPFRLSSDESLLVWYSGKDEKQ 60

Query: 61  LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRAL 120
           LKLS VS+IIPGQRTA+FQ+YPQPEKEYQSFSL+Y +RSLDLICKDKDEAE+WF  L+AL
Sbjct: 61  LKLSLVSKIIPGQRTAIFQQYPQPEKEYQSFSLLYNDRSLDLICKDKDEAEVWFVGLKAL 120

Query: 121 ISEDN----RCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENS 176
           I+  N    R +SR +S+SSDSP +  ++NSPS        +T  D GD     V+YEN+
Sbjct: 121 ITRGNHRKWRVESRCESVSSDSPHARLRRNSPS--------ITPCDPGDLDG--VSYENT 170

Query: 177 PQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSA 236
            QNRLGKAFSE+LS+TA +K  ++ +S+      +++  +D++N R S ++ FR+SLSSA
Sbjct: 171 GQNRLGKAFSELLSYTAVSKGTSQPKSIVNP--SLSTALIDNSNGRISASEGFRVSLSSA 228

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVN--GVEISSADRRDALLPKVLESTV 294
           VSSSSQGSC EDFD LGDV+IWGEG+G+GLLGG VN  G + S   + DALLPK LESTV
Sbjct: 229 VSSSSQGSCPEDFDALGDVYIWGEGIGDGLLGGGVNKVGSQCSLNSKLDALLPKALESTV 288

Query: 295 VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA 354
           VLD   IACG +HAVLVT+QG+IFSWGE SGG+LGHGVEADVS+PK+ID L+G+N+ +VA
Sbjct: 289 VLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVA 348

Query: 355 CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
           CGE+HTCAVTLSGDLYTWGDG HN GLLG  SE+SHWIP+KV GQMEG+++S I CG WH
Sbjct: 349 CGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWH 408

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           TA +TSAG+LFTFGDG+FGALGHGD  +++ PREVETL+ L+T   +CGVWHTAA VE  
Sbjct: 409 TAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAI 468

Query: 475 GKTSGSN---GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
            + S S      SS+KL+TWGDG +G+LGHGD EPR+VP CV    +   C+VACG+ +T
Sbjct: 469 NELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALIEERICQVACGNDLT 528

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
           +ALT  G+V++MGS  YGQLGS  + GK PT +EG I + ++E++ACGSYH+AV++SK+E
Sbjct: 529 VALTTAGRVYTMGSTAYGQLGSATANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNE 588

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSI 651
           VYTWGKG NGQLGHGDN ++ TPT+V+ L+DKQVK+V CGS FT  IC+HK VS ADHS+
Sbjct: 589 VYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNVACGSKFTVVICIHKWVSSADHSV 648

Query: 652 CSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTS 711
           CSGC N F FRR+RHNCYNCGLV+CK CSSKKS+K +LAP   KPYRVCDDCF KL    
Sbjct: 649 CSGCHNPFGFRRKRHNCYNCGLVFCKACSSKKSLKASLAPNXKKPYRVCDDCFNKLKKIM 708

Query: 712 ESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPN 771
           ES S SQ                     N+R+ T       G  ++ S  +  K  W P 
Sbjct: 709 ESSSVSQ---------------------NARART-------GNIHYKSNGVMDKETWVPK 740

Query: 772 --------SDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFE 823
                   S F   N  +A    SR  SRA SP+   SSP           + +SE   E
Sbjct: 741 LQATLSRLSSFGAIN--NAESMHSRLASRATSPVLGTSSP-----------IRSSEDFSE 787

Query: 824 YSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQE 883
            SK+ ND   QE   LRAQ+++LT KS+ LE ELE+TS+KL E T IA +EAEK K+A+E
Sbjct: 788 DSKRANDTLTQEIISLRAQVQELTCKSKNLEAELEKTSKKLLEVTAIAADEAEKCKSAKE 847

Query: 884 VIRSLTAQAR 893
           VI+SL AQ +
Sbjct: 848 VIKSLAAQLK 857


>gi|255562792|ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223538286|gb|EEF39893.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1042

 Score = 1001 bits (2588), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/921 (57%), Positives = 664/921 (72%), Gaps = 37/921 (4%)

Query: 1   MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ 60
           MA  Q+  L ERD EQA+  LKKG YLLKYGRRGKPKFCPF+LSSDE +LIWY+GKEEKQ
Sbjct: 1   MADTQRVGLAERDIEQAITSLKKGAYLLKYGRRGKPKFCPFQLSSDESMLIWYSGKEEKQ 60

Query: 61  LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRAL 120
           LKLS VS+IIPGQRTA+FQRYP+PEKEYQSFSLIY +RSLDLICKDKDEAE+WF  L+AL
Sbjct: 61  LKLSQVSKIIPGQRTAIFQRYPRPEKEYQSFSLIYSDRSLDLICKDKDEAEVWFVGLKAL 120

Query: 121 ISEDN-----RCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYEN 175
           I+  +     R + RS+S SSDSP   T+++S S    + S L +   GD Q   V +E+
Sbjct: 121 ITRGSYQSKWRIEPRSESTSSDSPHIRTRRHSRSISPFVRSSLWH---GDGQGSPVPFES 177

Query: 176 SPQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSS 235
            P NRLGKAF +++S+TAA K+ +RAE +S   + + +  +D++N R+STAD+ R+SLSS
Sbjct: 178 IPSNRLGKAFCDIISYTAAEKSPSRAELLSSPFSSLNAACVDNSNGRTSTADTVRVSLSS 237

Query: 236 AVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVV 295
           AVSSSSQGS HEDFD LGDVF WGEG+G+G+LGG V+   I+S+ + DA LPK LES VV
Sbjct: 238 AVSSSSQGSYHEDFDALGDVFFWGEGVGDGILGGGVHITGITSSPKVDAFLPKALESKVV 297

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
           LD   IACG +HAVLVTK G+IFSWGE SGG+LGHG++ADV  PKLID L G NI +VAC
Sbjct: 298 LDVHYIACGGRHAVLVTKPGEIFSWGEESGGRLGHGIKADVPNPKLIDTLAGMNIELVAC 357

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
           GE HTCAVT SGDLYTWGDG +N GLLG  SE SHWIP+++ G MEG+ +S + CGPWHT
Sbjct: 358 GENHTCAVTFSGDLYTWGDGAYNCGLLGHGSEASHWIPKRIGGDMEGIHVSYVSCGPWHT 417

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           AA+TS G+LFTFGDGTFGALGHGD SS +VPREVETL+ L+T+  SCGVWHTAA VE+  
Sbjct: 418 AAVTSVGQLFTFGDGTFGALGHGDHSSATVPREVETLRGLRTIRVSCGVWHTAAAVEITT 477

Query: 476 KTSGSNGLSSK---KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
           ++S   G  S    KLFTWG+G E +LGHGD EPR+ P CV    D + C+VACGH++T+
Sbjct: 478 ESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDKEPRLFPECVVALGDENICQVACGHNLTL 537

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
           ALTA G+V++MGS  YGQLG+P +TGK P  +EG I  + IE+IACGSYH+AV++SK+EV
Sbjct: 538 ALTAAGRVYTMGSTSYGQLGNPRATGKVPAIVEGKIAGKIIEEIACGSYHVAVLTSKAEV 597

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSIC 652
           YTWGKG NGQLGHGDN+++  PT+V+ LRDKQV++V CGSNFTA ICLHK VS ADHS+C
Sbjct: 598 YTWGKGTNGQLGHGDNKDRNQPTVVDFLRDKQVRAVACGSNFTAIICLHKWVSSADHSVC 657

Query: 653 SGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSE 712
           SGC N F FRR+RHNCYNCGLV+CK CSS+KS+K +LAP +NKP+RVCDDCF KL   +E
Sbjct: 658 SGCHNPFGFRRKRHNCYNCGLVFCKACSSRKSLKASLAPNMNKPHRVCDDCFNKLKKAAE 717

Query: 713 SGSNSQIPRNSSG-LFQNCKRVTEKENMNSRSATDGQSKP------KGKSYHAS------ 759
            G+  +IP++ +G L Q      ++E ++ +  T     P      + +S+H+       
Sbjct: 718 PGTVPRIPKSRAGNLNQKTNEAADRETLDPKLQTQLSRLPSLDSASQAESWHSRRDRISE 777

Query: 760 -------PSLNGKFQWEPNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSITMNSF 812
                  P L G +Q      F  S   S     S      P+  SR   PA        
Sbjct: 778 SDTTRVFPVLIGNWQL---GHFYSSKGSSFLGGTSTNFFLNPASGSRMPPPATPPLPGRT 834

Query: 813 TDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQ 872
           T   +S   F+ SK  ND+ + E   LRAQ+EDLT KS  LE ELER SR+LKE   IA 
Sbjct: 835 TPPRSS---FDDSKHMNDSLSDEIISLRAQVEDLTLKSCRLEAELERKSRQLKEVAAIAA 891

Query: 873 EEAEKNKAAQEVIRSLTAQAR 893
           +EAEK K+A+EVI+SLTAQ +
Sbjct: 892 DEAEKRKSAKEVIKSLTAQLK 912


>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1100

 Score =  993 bits (2568), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 524/921 (56%), Positives = 674/921 (73%), Gaps = 38/921 (4%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           VERD EQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEEK LKLSHVSRI
Sbjct: 11  VERDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLKLSHVSRI 70

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN---- 125
           I GQRT +FQRYP+PEKEYQSFSLIY  RSLDLICKDKDEAE+WF+ L+ALI+  +    
Sbjct: 71  ISGQRTPIFQRYPRPEKEYQSFSLIYNERSLDLICKDKDEAEVWFSGLKALITRSHQRKW 130

Query: 126 RCKSRSDSISSD--SPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           R +SRSD I S+  SPR++T+++SP +    S+D   KD GD   +   YE+ P+N L K
Sbjct: 131 RTESRSDGIPSEANSPRTYTRRSSPLNSPFGSNDSLQKD-GDQLRLHSPYESPPKNGLDK 189

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDA--NSRSSTADSFRISLSSAVSSSS 241
           AFS+V+ +    K +  ++S S S++ ++SGG D    + ++   D+FR+SLSSAVSSSS
Sbjct: 190 AFSDVILYAVPPKGFFPSDSASASVHSLSSGGSDSVRGHMKAMAMDAFRVSLSSAVSSSS 249

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
           QGS H+D D LGDVFIWGEG G+G+LGG  +        + D+LLPK LESTVVLD Q+I
Sbjct: 250 QGSGHDDSDALGDVFIWGEGTGDGVLGGGAHRAGSGFGVKLDSLLPKALESTVVLDVQNI 309

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           ACG +HA LVTKQG++FSWGE SGG+LGHGV++DV +PKLID+L+  NI +VACGE+HTC
Sbjct: 310 ACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDSLSNINIELVACGEYHTC 369

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AVTLSGDLYTWGDG +N GLLG  +E+SHW+P++V+G +EG+ +SSI CGPWHTA +TS+
Sbjct: 370 AVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSS 429

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+LFTFGDGTFG LGHGDR S S+PREVE+LK L+TV A+CGVWHTAA+VEV    S S+
Sbjct: 430 GQLFTFGDGTFGVLGHGDRKSVSIPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 489

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             SS KLFTWGDG +G+LGHGD E ++VP CV    + +FC+VACGHS+T+ALT +G V+
Sbjct: 490 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVY 549

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           +MGS  YGQLG+P + GK P R+EG +   ++E+IACG+YH+AV++SK+EVYTWGKGANG
Sbjct: 550 TMGSPVYGQLGNPQADGKLPNRVEGRLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANG 609

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           +LGHGD +++  P+LVEAL+DKQVKS+ CG+NFTAAICLHK VS  D S+CSGCR  FNF
Sbjct: 610 RLGHGDTDDRNFPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGIDQSMCSGCRLPFNF 669

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQ--I 719
           +R+RHNCYNCGLV+C  CSSKKS+K ++AP  NKP+RVCD+C+ KL    E+ ++SQ  +
Sbjct: 670 KRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPFRVCDNCYSKLRKAIETDASSQSSV 729

Query: 720 PRNSSGLFQNCKRVTEKENMNSRS--------------ATDGQSKPKGK----SYHASPS 761
            R  S    + + + + E ++SRS                + +SK   K    S   SP 
Sbjct: 730 SRRGSVNHGSNEFIDKDEKLDSRSRAQLARFSSMESLKQAENRSKRNKKLEFNSSRVSPV 789

Query: 762 LNGKFQWEP-------NSDFIKSNK-ISASPPGSRRVSRAP-SPISRKSSPACSITMNSF 812
            NG  QW         N  F  S K  SAS PGSR VSRA      R S P  +    + 
Sbjct: 790 PNGGSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTL 849

Query: 813 TDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQ 872
             L + +++   +K+TN++ +QE + LRAQ+E LTRK+Q  EVELER +++LKE   IA 
Sbjct: 850 GGLTSPKLVVNDAKRTNESLSQEVNKLRAQVESLTRKAQVQEVELERAAKQLKEAIAIAG 909

Query: 873 EEAEKNKAAQEVIRSLTAQAR 893
           EE  K KAA+EVI+SLTAQ +
Sbjct: 910 EETAKCKAAKEVIKSLTAQLK 930


>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
          Length = 1106

 Score =  989 bits (2556), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 521/924 (56%), Positives = 678/924 (73%), Gaps = 42/924 (4%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           VERD EQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEEK+LKL++VSRI
Sbjct: 18  VERDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESILIWFSGKEEKRLKLTNVSRI 77

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN---- 125
           I GQRT +FQRYP+PEKEYQSFSLIY +RSLDLICKDKDEAE+WF+ L+ALIS  +    
Sbjct: 78  ISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALISRSHHRKW 137

Query: 126 RCKSRSDSISSD--SPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           R +SRSD I S+  SPR++T+++SP +    S++   KDSGD   +   YE+ P+N L K
Sbjct: 138 RPESRSDGIPSEANSPRTYTRRSSPLNSPFGSNESLQKDSGDHLRLHSPYESPPKNGLDK 197

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTA--DSFRISLSSAVSSSS 241
           AFS+V+ +      + R +S S SL+ V+SGG D  + +  T   D+FR+SLSSAVSSSS
Sbjct: 198 AFSDVIYYPIPPMGFFRPDSASGSLHSVSSGGSDSMHGQMKTMPMDAFRVSLSSAVSSSS 257

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
           QGS H+D D LGDVFIWGEG+G+G+LGG V+ V  +   + D+LLPK LES VVLD Q+I
Sbjct: 258 QGSGHDDGDALGDVFIWGEGMGDGVLGGGVHQVGSNFGVKMDSLLPKALESAVVLDVQNI 317

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           ACG KHA LVTKQG++FSWGE SGG+LGHGV++DV +PKLI++L+ +NI +VACGE+HTC
Sbjct: 318 ACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTC 377

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AVTLSGDLYTWGDG +N GLLG  +++SHW+P++V+G +EG+ +SSI CGPWHTA +TS+
Sbjct: 378 AVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSS 437

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+LFTFGDGTFGALGHGDR S S+PRE+E+LK L+TV A+CGVWHTAA+VEV    S S+
Sbjct: 438 GQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSS 497

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             SS KLFTWGDG +G+LGHGD E ++VP CV V+     C+VACGHS+T+AL+ +G V+
Sbjct: 498 NCSSGKLFTWGDGDKGRLGHGDKESKLVPTCV-VTLVEPNCQVACGHSMTVALSRSGHVY 556

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           +MGS  YGQLG+  + GK P R+EG +   ++E+IACG+YH+AV++S++EV+TWGKGANG
Sbjct: 557 TMGSCVYGQLGNTQADGKLPIRVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANG 616

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           +LGHGD  ++ TPTLVEAL+DKQVKS+ CG+NFTAAICLHK VS  D S+CSGCR  FNF
Sbjct: 617 RLGHGDTNDRNTPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRVPFNF 676

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSES-------- 713
           +R+RHNCYNCGLV+C  CS+KKS+K ++AP  NKPYRVCD+CF K+  T+E+        
Sbjct: 677 KRKRHNCYNCGLVFCHSCSNKKSVKASMAPNPNKPYRVCDNCFNKIRKTTETDSSSQSSM 736

Query: 714 ---------------GSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHA 758
                          G + ++   S         +   + ++SRS+   + K +  S   
Sbjct: 737 SRRGSLNQGWSLEFNGKDDKLDSRSHNQLARFSSMESLKQVDSRSSKKNK-KLEFNSSRV 795

Query: 759 SPSLNGKFQWEP-------NSDFIKSNK-ISASPPGSRRVSRAP-SPISRKSSPACSITM 809
           SP+ NG  QW         N  F  S K  SAS PGSR VSRA      R S P  +   
Sbjct: 796 SPAPNGGSQWGAMNISKSFNPGFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPT 855

Query: 810 NSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQ 869
            +   L++ +++ + +K+ NDN +QE   LR+Q+E+LTRK+Q  EVELERT+++LKE   
Sbjct: 856 PTLGGLSSPKMVVDDAKRINDNLSQEVVKLRSQVENLTRKAQLQEVELERTTKQLKEAIA 915

Query: 870 IAQEEAEKNKAAQEVIRSLTAQAR 893
           IA EE  K KAA+EVI+SLTAQ +
Sbjct: 916 IASEETAKCKAAKEVIKSLTAQLK 939


>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
 gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
          Length = 1104

 Score =  987 bits (2551), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/921 (56%), Positives = 669/921 (72%), Gaps = 38/921 (4%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           VERD EQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEEK L+LSHVS+I
Sbjct: 17  VERDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLRLSHVSKI 76

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN---- 125
           I GQRT +FQRYP+PEKEYQSFSLIY +RSLDLICKDKDEAE+WF+ L+ALIS  +    
Sbjct: 77  ISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALISRSHHQKW 136

Query: 126 RCKSRSDSISSD--SPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           R +SRSD I S+  SPR++T+++SP +    S+D + KD+ D   +   YE+ P+N L K
Sbjct: 137 RTESRSDGIPSEANSPRTYTRRSSPLNSPFGSNDGSQKDA-DHHRLHSPYESPPKNGLDK 195

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANS--RSSTADSFRISLSSAVSSSS 241
           AFS+V+ +    K +  ++S S S++ ++SGG D  +   ++   D+FR+SLSSAVSS S
Sbjct: 196 AFSDVVLYAVPPKGFFPSDSASGSVHSLSSGGSDSVHGHMKAMAVDAFRVSLSSAVSSLS 255

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
           QGS H+D   LGDVFIWGEG+G+G+LGG  +        + D+L PK LES VVLD Q+I
Sbjct: 256 QGSGHDDGGALGDVFIWGEGMGDGVLGGGTHRAGSYFGVKMDSLFPKALESAVVLDVQNI 315

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           ACG +HA LVTKQG+IFSWGE SGG+LGHGV++DV +PKLIDAL+ +NI +VACGE+HTC
Sbjct: 316 ACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVMHPKLIDALSNTNIELVACGEYHTC 375

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AVTLSGDLYTWGDG +N GLLG  +E+SHW+P++V+G +EG+ +SSI CGPWHTA +TSA
Sbjct: 376 AVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSA 435

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+LFTFGDGTFG LGHGDR S S+P+EVE+LK L+TV A+CGVWHTAA++EV    S S+
Sbjct: 436 GQLFTFGDGTFGVLGHGDRKSISLPKEVESLKGLRTVQAACGVWHTAAVIEVMVGNSSSS 495

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             SS KLFTWGDG +G+LGHGD E ++VP CV    + +FC+VACGHS+T+A T +G V+
Sbjct: 496 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHSLTVARTTSGHVY 555

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           +MGS  YGQLG+P + GK PTR+EG +   ++E+IACG+YH+AV++SK+EVYTWGKGANG
Sbjct: 556 TMGSPVYGQLGNPLADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANG 615

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           +LGHGD +++ +P+LVEAL+DKQVKS+ CG++FTAAICLHK VS  D S+CSGCR  FNF
Sbjct: 616 RLGHGDTDDRNSPSLVEALKDKQVKSIACGTSFTAAICLHKWVSGVDQSMCSGCRLPFNF 675

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPR 721
           +R+RHNCYNCGLVYC  CSSKKS+K ++AP  NK YRVCD+C+ KL    E+ ++SQ   
Sbjct: 676 KRKRHNCYNCGLVYCHSCSSKKSLKASMAPNPNKAYRVCDNCYNKLRKAIETDASSQSSV 735

Query: 722 NSSGLFQNCKR--VTEKENMNSRS--------------ATDGQSKPKGK----SYHASPS 761
           +  G      R  + E E ++ RS                + +SK   K    S   SP 
Sbjct: 736 SRRGSVNQGPREFIDEDEKLDFRSRAQLARFSSMESLKQAESRSKRNKKLEFNSSRVSPV 795

Query: 762 LNGKFQWEP-------NSDFIKSNK-ISASPPGSRRVSRAP-SPISRKSSPACSITMNSF 812
            NG  QW         N  F  S K  SAS PGSR VSRA      R S P  +    + 
Sbjct: 796 PNGGSQWGALNISKSFNPMFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPTL 855

Query: 813 TDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQ 872
             L + +++ + +K+  ++ NQE   LRAQ+E LTRK+Q  EVELERT+ +LKE   IA 
Sbjct: 856 GGLTSPKIVVDDAKRNYESLNQEVIKLRAQMESLTRKAQLQEVELERTTMQLKEAIAIAG 915

Query: 873 EEAEKNKAAQEVIRSLTAQAR 893
           EE  K KAA+EVI+SLTAQ +
Sbjct: 916 EETAKCKAAKEVIKSLTAQLK 936


>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1124

 Score =  966 bits (2497), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/941 (55%), Positives = 662/941 (70%), Gaps = 71/941 (7%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSS-------DEKLLIWYAGKEEKQLK 62
           VERD EQA+  LKKG  LLKYGRRGKPKFCPFRLS+       DE +LIW++GKEEK LK
Sbjct: 32  VERDIEQAITALKKGACLLKYGRRGKPKFCPFRLSNVRVALLFDESVLIWFSGKEEKHLK 91

Query: 63  LSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALIS 122
           LSHVSRII GQRT +FQRYP+PEKEYQSFSLIY +RSLDLICKDKDEAE+WF+ L+ALIS
Sbjct: 92  LSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALIS 151

Query: 123 EDN----RCKSRSDSISSD--SPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENS 176
             +    R +SRSD I S+  SPR++T+++SP H    S++ + KDSGD   +   YE+ 
Sbjct: 152 RSHHRKWRTESRSDGIPSEANSPRTYTRRSSPLHSPFGSNESSQKDSGDHLRLHSPYESP 211

Query: 177 PQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTA--DSFRISLS 234
           P+N L KA   VL +    K++   +S S S++ ++SGG D  +    T   D+FR+SLS
Sbjct: 212 PKNGLDKALDVVL-YAVPQKSFFPLDSASASVHSISSGGSDSMHGHMKTMGMDAFRVSLS 270

Query: 235 SAVSSSSQGSCHEDFDGLGDVFIW------------GEGLGNGLLGGAVNGVEISSADRR 282
           SAVSSSSQGS H+D D LGDVFIW               +G+GL      GV+I      
Sbjct: 271 SAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVVGGGNHRVGSGL------GVKI------ 318

Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
           D+L PK LES VVLD Q+IACG +HA LVTKQG+IFSWGE SGG+LGHGV++DV +PKLI
Sbjct: 319 DSLFPKALESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLI 378

Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
           DAL+ +NI +VACGE+HTCAVTLSGDLYTWG+G +N GLLG  +++SHW+P++V+G +EG
Sbjct: 379 DALSNTNIELVACGEYHTCAVTLSGDLYTWGNGAYNYGLLGHGNQVSHWVPKRVNGPLEG 438

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
           + +S I CGPWHTA +TSAG+LFTFGDGTFGALGHGDR S S+PREVE+LK L+T+ ASC
Sbjct: 439 IHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTMRASC 498

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
           GVWHTAA+VEV    S S+  SS KLFTWGDG +G+LGHGD E ++VP CV + +  +FC
Sbjct: 499 GVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVALVEH-NFC 557

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
           +VACGHS+T+ALT +G V++MGS  YGQLG+P + GK PTR+EG +   ++E+IACG+YH
Sbjct: 558 QVACGHSLTVALTTSGHVYAMGSPVYGQLGNPQADGKLPTRVEGKLLKSFVEEIACGAYH 617

Query: 583 IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHK 642
           +AV++ ++EVYTWGKGANG+LGHGD +++  PTLV+AL+DK VKS+ CG+NFTAAICLHK
Sbjct: 618 VAVLTLRNEVYTWGKGANGRLGHGDTDDRNNPTLVDALKDKHVKSIACGTNFTAAICLHK 677

Query: 643 GVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDD 702
            VS  D S+CSGCR  FNF+R+RHNCYNCGLV+C  CSSKKS+K ++AP  NKPYRVCD 
Sbjct: 678 WVSGVDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDG 737

Query: 703 CFIKLNTTSES----------------GSNSQIPRNSSGLFQNCKRVTEKENMNSRSATD 746
           CF KL  T E+                GS   I ++     ++  ++    +M S    +
Sbjct: 738 CFNKLRKTLETDSSSHSSVSRRGSINQGSLELIDKDDKLDTRSRNQLARFSSMESFKQVE 797

Query: 747 GQSKPKGK-----SYHASPSLNGKFQWEP-------NSDFIKSNK-ISASPPGSRRVSRA 793
            +S  K K     S   SP  NG  Q          N  F  S K  SAS PGSR VSRA
Sbjct: 798 SRSSKKNKKLEFNSSRVSPVPNGGSQRGALNISKSFNPVFGSSKKFFSASVPGSRIVSRA 857

Query: 794 P-SPISRKSSPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQF 852
                 R S P  +    +   L   +++ + +K+TND+ +QE   LR+Q+E LTRK+Q 
Sbjct: 858 TSPISRRPSPPRSTTPTPTLGGLTTPKIVVDDAKKTNDSLSQEVIKLRSQVESLTRKAQL 917

Query: 853 LEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
            E+ELERTS++LK+   IA EE  K KAA+EVI+SLTAQ +
Sbjct: 918 QEIELERTSKQLKDAIAIAGEETAKCKAAKEVIKSLTAQLK 958


>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
          Length = 1099

 Score =  965 bits (2494), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/920 (56%), Positives = 671/920 (72%), Gaps = 38/920 (4%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           VERD EQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEEK+LKL++VSRI
Sbjct: 11  VERDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKRLKLTNVSRI 70

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN---- 125
           I GQRT +FQRYP+PEKEYQSFSLIY +RSLDLICKDKDEAE+WF+ L+ALIS  +    
Sbjct: 71  ISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALISRGHHWKW 130

Query: 126 RCKSRSDSISSD--SPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           R +SR+D I S+  SPR++T+++SP +    S++   KDSGD   +   YE+ P+N L K
Sbjct: 131 RPESRTDGIPSEANSPRTYTRRSSPLNSPFGSNESLQKDSGDHLRLHSPYESPPKNGLDK 190

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTA--DSFRISLSSAVSSSS 241
           AFS+V+ +      +   +S S S++ V+SGG D  + +  T   D+FR+SLSSAVSSSS
Sbjct: 191 AFSDVVYYPIPPMGFFPPDSASGSVHSVSSGGSDSMHGQMKTMPMDAFRVSLSSAVSSSS 250

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
           QGS H+D D LGDVFIWGEG G+G+LGG  + V  +   + D+LLPK LES VVLD Q+I
Sbjct: 251 QGSGHDDGDALGDVFIWGEGTGDGVLGGGAHHVGSNFGVKMDSLLPKALESAVVLDVQNI 310

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           ACG +HA +VTKQG++FSWG  SGG+LGHGV++DV +PKLI++L+ +NI +VACGE+HTC
Sbjct: 311 ACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTC 370

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AVTLSGDLYTWGDG +N GLLG  +++SHW+P++V+G +EG+ +SSI CGPWHTA +TS+
Sbjct: 371 AVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSSISCGPWHTAVVTSS 430

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+LFTFGDGTFG LGHGDR S S+PRE+E+LK L+TV A+CGVWHTAA+VEV    S S+
Sbjct: 431 GQLFTFGDGTFGVLGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSS 490

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             SS KLFTWGDG +G+LGHGD E ++VP  V   D+ +FC+VACGHS+T+AL+  G V+
Sbjct: 491 NCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVVTLDEPNFCQVACGHSMTVALSRLGHVY 550

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           +MGS  YG LG+  + GK PT +EG +   ++E+IACG+YH+AV++S++EV+TWGKGANG
Sbjct: 551 TMGSCVYGHLGNTQADGKLPTPVEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANG 610

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
            LGHGD  ++ TPTLVEAL+DKQVKS+ CG+NFTAAICLHK VS  D S+CSGCR  FNF
Sbjct: 611 CLGHGDTNDRNTPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRVPFNF 670

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPR 721
           +R+RHNCYNCGL +C  CS+KKS+K ++AP  NKPYRVCD+CF K+  T+E+ S+SQ   
Sbjct: 671 KRKRHNCYNCGLAFCHSCSNKKSVKASMAPNPNKPYRVCDNCFNKIRKTTETDSSSQASM 730

Query: 722 ------NSSGLFQNCK----------RVTEKENMNSRSATDGQSKPKGK-----SYHASP 760
                 N   L  N K          ++    +M S    D +S  K K     S   SP
Sbjct: 731 SRRGSVNQGSLEFNGKDDKLDSRSHNQLARFSSMESLKQVDSRSSKKNKKLEFNSSRVSP 790

Query: 761 SLNGKFQWEP-------NSDFIKSNK-ISASPPGSRRVSRAP-SPISRKSSPACSITMNS 811
           + NG  QW         N  F  S K  SAS PGSR VSRA      R S P  +    +
Sbjct: 791 APNGGSQWGAMNISKSFNPVFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPT 850

Query: 812 FTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIA 871
              L++ +++ + +K+ NDN +QE   LR+Q+E+LTRK+Q  EVELERT+++LKE   IA
Sbjct: 851 LGGLSSPKIVVDDAKRINDNLSQEVVKLRSQVENLTRKAQLQEVELERTTKQLKEAIAIA 910

Query: 872 QEEAEKNKAAQEVIRSLTAQ 891
            EE  K KAA+EVI+SLTAQ
Sbjct: 911 SEETAKCKAAKEVIKSLTAQ 930


>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
 gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  965 bits (2494), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/932 (55%), Positives = 667/932 (71%), Gaps = 49/932 (5%)

Query: 10  VERDTEQAVR-----------VLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEE 58
           VERD EQ +             LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEE
Sbjct: 11  VERDMEQLIMKWKYILKESNPALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEE 70

Query: 59  KQLKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALR 118
           K L+LSHVSRII GQRT +FQRYP+PEKEYQSFSLIY +RSLDLICKDKDEAE+WF+ L+
Sbjct: 71  KHLRLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLK 130

Query: 119 ALISEDN----RCKSRSDSISSD--SPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVA 172
           ALIS  +    R +SRSD I S+  SPR++T+++SP +    S+D   KD+ D   I   
Sbjct: 131 ALISRSHHRKSRTESRSDGILSEVNSPRTYTRRSSPLNSPFGSNDSLQKDA-DHLRIHSP 189

Query: 173 YENSPQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANS--RSSTADSFR 230
           YE+ P+N L K FS+V+ +    K +  ++S S S++ ++SGG D  +   ++   D+FR
Sbjct: 190 YESPPKNGLDKTFSDVVLYAVPPKGFFPSDSASGSVHSLSSGGSDSVHGHMKAVAMDAFR 249

Query: 231 ISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVL 290
           +SLSSAVSSSSQGS H+D + +GDVFIWGEG G+G+LGG  + V      + D+LLPK L
Sbjct: 250 VSLSSAVSSSSQGSGHDDGEAMGDVFIWGEGTGDGVLGGGTHRVGSFFGVKMDSLLPKAL 309

Query: 291 ESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNI 350
           ES VVLD Q+IACG +HA LVTKQG+IFSWGE SGG+LGHGV++DV +P+LI+AL+ +NI
Sbjct: 310 ESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQLIEALSNTNI 369

Query: 351 HMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC 410
             VACGE+HTCAVTLSGDLYTWGDG +N GLLG  +E+SHW+P++V+G +EG+ +SSI C
Sbjct: 370 EFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISC 429

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
           GPWHTA ++SAG+LFTFGDGTFG LGHGDR S S+PREVE+LK L+TV A+CGVWHTAA+
Sbjct: 430 GPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLRTVQAACGVWHTAAV 489

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
           VEV    S S+  SS KLFTWGDG +G+LGHGD E ++VP CV    + +FC+VACGHS+
Sbjct: 490 VEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVSALVEPNFCQVACGHSL 549

Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           TIA T +G V++MGS  YGQLG+P S GK P R+EG +    +E+IACG+YH+AV++SK+
Sbjct: 550 TIARTTSGHVYTMGSPVYGQLGNPQSDGKLPARVEGKLSRSSVEEIACGAYHVAVLTSKT 609

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHS 650
           EVYTWGKGANG+LGHGD ++K  P+LVEAL+DKQVKS+ CG+NFTAAICLHK VS  D S
Sbjct: 610 EVYTWGKGANGRLGHGDTDDKNLPSLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQS 669

Query: 651 ICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTT 710
           +CSGCR   NF+R+RHNCYNCGLVYC  CSSKKS+K ++AP  NK YRVCD+C+ KL   
Sbjct: 670 MCSGCRLPLNFKRKRHNCYNCGLVYCHSCSSKKSLKASMAPNPNKAYRVCDNCYNKLRKA 729

Query: 711 SESGSNSQ--IPRNSSGLFQNCKRVTEKENMNSRS--------------ATDGQSKPKGK 754
            E+ ++SQ  + R  S      + + + E +++RS                + +SK   K
Sbjct: 730 METDASSQSSVSRRGSVNQGPSEFIDKDEKLDTRSRAQLARFSSMESLKQAESRSKRNKK 789

Query: 755 ----SYHASPSLNGKFQWEP-------NSDFIKSNK-ISASPPGSRRVSRAP-SPISRKS 801
               S   SP  NG  QW         N  F  S K  SAS PGSR +SRA      R S
Sbjct: 790 LEFNSSRVSPVPNGGSQWGAFNISKSFNPMFASSKKFFSASVPGSRIISRATSPISRRPS 849

Query: 802 SPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTS 861
            P  +    +   L + +++ + +K+TN++ +QE   LRAQ+E+L+ K+Q  EVELER +
Sbjct: 850 PPRSTTPTPTLGGLTSPKIVVDDAKRTNESLSQEVLKLRAQVENLSHKTQLQEVELERIT 909

Query: 862 RKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
            +LKE   IA EE  K KAA+EVI+SLTAQ +
Sbjct: 910 ERLKEARAIAGEETAKCKAAKEVIKSLTAQLK 941


>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1096

 Score =  960 bits (2482), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/923 (55%), Positives = 658/923 (71%), Gaps = 46/923 (4%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           VERD E A+  LKKG  LLKYGRRGKPKFCPFRL++DE  L+W +GKEEK LKLSHVSRI
Sbjct: 12  VERDIELAITALKKGAQLLKYGRRGKPKFCPFRLANDESALVWLSGKEEKHLKLSHVSRI 71

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN---- 125
           I GQRT +FQRYP+PEKEYQSFSLIY +RSLDLICKDKDEAE+W T L+ALIS ++    
Sbjct: 72  ISGQRTPIFQRYPRPEKEYQSFSLIYDDRSLDLICKDKDEAEVWITGLKALISRNHMRKG 131

Query: 126 RCKSRSDSISSD--SPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           R +SRSD ISS+  SPR+HTQ++SP   +  S D + KD  D   +   Y + P+  L K
Sbjct: 132 RGESRSDGISSEATSPRAHTQRSSPLSSAFGSGDSSQKDEIDPLRLRTPYGSPPKAGLEK 191

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSR--SSTADSFRISLSSAVSSSS 241
             S++  +  A K     ES   S++ V+S G D  N R    T D+FR+SLSSAVSSSS
Sbjct: 192 VLSDMELYAVAPKVLCPPESACGSVHSVSSAGSDAINGRLKGMTVDAFRVSLSSAVSSSS 251

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
           QGS H+D D LGDV+IWGEG   G+LGG +NGV  S   R D+ +PK LES V+LD Q+I
Sbjct: 252 QGSGHDDSDALGDVYIWGEGTAGGILGGGMNGVGGSGV-RTDSFVPKALESAVLLDVQTI 310

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           ACG +HA LVTKQG++FSWGE  GG+LGHGV++DV +PKL+D L  +N+ +VACGE+H+C
Sbjct: 311 ACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKLVDGLKNTNVELVACGEYHSC 370

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AVTLSGDLYTWG   HN GLLG  +E S+W+P+K++G +EG+ ++++ CGPWHTA +TS+
Sbjct: 371 AVTLSGDLYTWGGSSHNCGLLGYRNEASNWVPKKLNGPLEGIHVAAVSCGPWHTAVVTSS 430

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+LFTFGDGTFG LGHGDR S S PREVE+LK L+TV A+CGVWHTAA+VEV   +S S+
Sbjct: 431 GQLFTFGDGTFGVLGHGDRRSVSTPREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 490

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             SS KLFTWGDG +G+LGHGD E R+VP CV    + +FC+VACGHS+T+ALT TG V+
Sbjct: 491 NCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALVEPNFCQVACGHSMTVALTTTGHVY 550

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           +MGS  YGQLG+P + GK P R+EG +   ++E++ CG+YH+AV++S++EVYTWGKGANG
Sbjct: 551 TMGSPVYGQLGNPQADGKLPVRVEGKLSKNFVEELDCGAYHVAVLTSRTEVYTWGKGANG 610

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           +LGHGD +++ +PT+VEAL+DKQVKSVVCG++FTAAICLHK VS  D S+CSGCR  FNF
Sbjct: 611 RLGHGDTDDRSSPTIVEALKDKQVKSVVCGTSFTAAICLHKWVSGIDQSMCSGCRLPFNF 670

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPR 721
           +R+RHNCYNCGLV+C  CS+KKS+K ++AP  NKPYRVCD CF KL   +E  S+     
Sbjct: 671 KRKRHNCYNCGLVFCHSCSNKKSLKASMAPNPNKPYRVCDQCFGKLRRATEIDSSYHSAL 730

Query: 722 NSSGLFQNCKRVTEKENM---NSRSA--------------TDGQSKPKGKSYHASPSLNG 764
           +  G     +R+ E EN    N+RS                + +S  + K      SLNG
Sbjct: 731 SRRGSIN--QRLIEAENSEYPNTRSRIQLGRNNSIEMSKDVESESLKRNKKL----SLNG 784

Query: 765 ------------KFQWEPNSDFIKSNK-ISASPPGSRRVSRAPSPISRKSSPACSITMNS 811
                       +  +  +  F  S K  SAS PGSR +SRA SP SR+SSP  + T   
Sbjct: 785 SQVSLSANDSSQRNAFNTSKSFGSSKKFFSASLPGSRIMSRATSPTSRRSSPPRATTPTP 844

Query: 812 FTDL-ANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQI 870
              + A   ++ + +K+ ND  ++E   LR+Q+E+LTRK+Q  +VELERT+++LKE   +
Sbjct: 845 ILSVRALPRIVVDDTKKLNDGLSEEVVKLRSQVEELTRKAQLQDVELERTTKQLKEAIAV 904

Query: 871 AQEEAEKNKAAQEVIRSLTAQAR 893
           A EE  K KAA+EVI+SLTAQ +
Sbjct: 905 ADEETAKCKAAKEVIKSLTAQLK 927


>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
          Length = 1106

 Score =  957 bits (2475), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/922 (55%), Positives = 667/922 (72%), Gaps = 40/922 (4%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           VERD EQA+  LKKG  LLKYGRRG PKFCPFRLS+DE +LIW++GKEEK LKLSHVSRI
Sbjct: 16  VERDIEQAITALKKGACLLKYGRRGTPKFCPFRLSNDESVLIWFSGKEEKHLKLSHVSRI 75

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN---- 125
           I GQRT +FQRYP+PEKEYQSFSLIY +RSLDLICKDKDEAE+WF+ L+ALIS  +    
Sbjct: 76  ISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALISRSHHRKW 135

Query: 126 RCKSRSDSISSD--SPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           R +SRSD I S+  SPR++T+++SP +    S++   KD GD   +   YE+ P+N L K
Sbjct: 136 RTESRSDGIPSEANSPRTYTRRSSPLNSPFGSNESLQKDCGDHLRLHSPYESPPKNGLDK 195

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTA--DSFRISLSSAVSSSS 241
           A   VL +    K +   +S S S++ V+SGG D  +    T   D+FR+SLSSAVS+SS
Sbjct: 196 ALDVVL-YAVPQKGFFPPDSASASVHSVSSGGSDSMHGHMKTMGMDAFRVSLSSAVSTSS 254

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
           QGS H+D D LGDVFIWGEG G+G+LGG  + V      + D+L PK LES VVLD Q+I
Sbjct: 255 QGSGHDDGDALGDVFIWGEGTGDGVLGGGNHRVGSCLGAKMDSLFPKALESAVVLDVQNI 314

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           ACG +HA LVTKQG++FSWGE SGG+LGHGV++DV +PKLI+AL+ +NI +VACGE+H+C
Sbjct: 315 ACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHSC 374

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AVTLSGDLYTWG+G +N GLLG  +++SHW+P++V+G +EG+ +S I CGPWHTA +TSA
Sbjct: 375 AVTLSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSA 434

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+LFTFGDGTFGALGHGDR S S+PREVE+LK L+TV A+CGVWHTAA+VEV    S S+
Sbjct: 435 GQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 494

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             SS  LFTWGDG +G+LGH D E ++VP CV +++  + C+VACGHS+T+ALT +G+V+
Sbjct: 495 NCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCVALAEH-NVCQVACGHSLTVALTTSGRVY 553

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           +MGS  YGQLG+P + GK P  +EG +   ++E+IACG+YH+AV++S++EVYTWGKGANG
Sbjct: 554 TMGSPVYGQLGNPQADGKLPILVEGKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANG 613

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           +LGHGD +++ TPTLVEAL+DK VKS+ CG+ FTAAICLHK VS  D S+CSGCR  FNF
Sbjct: 614 RLGHGDTDDRNTPTLVEALKDKDVKSIACGTTFTAAICLHKWVSGVDQSMCSGCRMPFNF 673

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSES--GSNSQI 719
           +R+RHNCYNCGLV+C  CSSKKS+K ++AP  NKPYRVCD+C  KL  T E+   S+S +
Sbjct: 674 KRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCLNKLRKTVETDASSHSSV 733

Query: 720 PRNSSGLFQNCKRVTEKENMNSRS--------------ATDGQSKPKGK-----SYHASP 760
            R  S      + + + + ++SRS                + +S  K K     S   SP
Sbjct: 734 SRRGSVNQGPLELIDKDDKLDSRSRNQLARFSSMESFKQVESRSSKKNKKLEFNSSRVSP 793

Query: 761 SLNGKFQWEP-------NSDFIKSNK-ISASPPGSRRVSRAP-SPISRKSSPACSITMNS 811
             NG  QW         N  F  S K  SAS PGSR VSRA      R S P  +    +
Sbjct: 794 VPNGGSQWGALNISKSFNPVFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTPT 853

Query: 812 FTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIA 871
              LA+ +++ + +K+TND+ +QE   LR+Q+E+LTRK+Q  EVELERT+++LK+   IA
Sbjct: 854 LGGLASPKIVVDDAKRTNDSLSQEVIKLRSQVENLTRKAQLQEVELERTAKQLKDAIAIA 913

Query: 872 QEEAEKNKAAQEVIRSLTAQAR 893
            EE  K KAA+EVI+SLTAQ +
Sbjct: 914 GEETAKCKAAKEVIKSLTAQLK 935


>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
 gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
          Length = 1104

 Score =  957 bits (2473), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/928 (55%), Positives = 668/928 (71%), Gaps = 38/928 (4%)

Query: 2   ASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQL 61
           +   +N  VERD EQ++  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEEK L
Sbjct: 9   SDLNRNGPVERDIEQSIIALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKLL 68

Query: 62  KLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALI 121
           KLSHVSRII GQRT +FQRYP+PEKEYQSFSLIY +RSLDLICKDKDEAE+WF  L+ LI
Sbjct: 69  KLSHVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFNGLKTLI 128

Query: 122 SEDN----RCKSRSDSISSD--SPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYEN 175
           S  +    R +SRSD + S+  SPR++T+++SP +    S+D   KD GD + +   Y +
Sbjct: 129 SRSHHRKWRTESRSDGMQSEANSPRTYTRRSSPLNSPFGSNDSLQKD-GDFR-LQSPYGS 186

Query: 176 SPQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLD-DANSRSSTADSFRISLS 234
            P+N + KA S+V+ +T   K +  ++S S S+N ++SG  +     ++   D+FR+SLS
Sbjct: 187 PPKNGMDKALSDVILYTVPPKGFFPSDSASISVNSLSSGSSEMHGPMKAMGIDAFRVSLS 246

Query: 235 SAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTV 294
           SAVSSSSQGS H+D D LGDVFIWGEG G+G+LGG  + V    + + D+LLPK LES V
Sbjct: 247 SAVSSSSQGSGHDDGDALGDVFIWGEGTGDGVLGGGSHKVGSCFSLKMDSLLPKALESAV 306

Query: 295 VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA 354
           VLD Q+IACG +HA LVTKQG+IF+WGE SGG+LGHGV++DV  PKL+DAL  +NI +V+
Sbjct: 307 VLDVQNIACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLVDALGNTNIELVS 366

Query: 355 CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
           CGE+HTCAVTLSGDLYTWGDG +N GLLG  +E+SHWIP+K++G +EG+ +SSI CGPWH
Sbjct: 367 CGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKINGPLEGIHVSSIACGPWH 426

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           TA +TSAG+LFTFGDGTFG LGHGDR S ++PREVE+LK L+TV A+CGVWHTAA+VEV 
Sbjct: 427 TAVVTSAGQLFTFGDGTFGVLGHGDRGSVTMPREVESLKGLRTVRAACGVWHTAAVVEVM 486

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
             +S S+  SS KLFTWGDG +G+LGHGD E ++VP CV    D +FC+V+CGHS+T+AL
Sbjct: 487 VGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDPNFCRVSCGHSMTVAL 546

Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
           T +G V++MGS  YGQLG+P + GK P R+EG +   ++E+IACG+YH+AV++S++EVYT
Sbjct: 547 TTSGHVYTMGSPVYGQLGNPHADGKVPVRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYT 606

Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSG 654
           WGKGANG+LGHGD +++ +PTLVEAL+DKQVKS+ CG+NFTAAICLHK VS  D S+CSG
Sbjct: 607 WGKGANGRLGHGDTDDRNSPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGFDQSMCSG 666

Query: 655 CRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSES- 713
           C   FNF+R+RHNCYNCGLV+C  CSSKK  K ++AP  NKPYRVCD+C+ KL    E+ 
Sbjct: 667 CHLPFNFKRKRHNCYNCGLVFCHSCSSKKCHKASMAPNPNKPYRVCDNCYNKLRKALETD 726

Query: 714 GSNSQIPRNSSGLFQNCKRVTEKE----------------NMNSRSATDGQSKPKGKSYH 757
            S+         + Q      EKE                +M S    + Q   K K + 
Sbjct: 727 ASSQSSVSRRRSINQGSTDFVEKEEKPESVKSRAQLARFSSMESVKQGENQFSKKNKKFE 786

Query: 758 -----ASPSLNGKFQWEP-----NSDFIKSNK-ISASPPGSRRVSRAPSPISRKS-SPAC 805
                 SP  NG  QW       N  F  S K  SAS PGSR VSRA SPISR++  P  
Sbjct: 787 CNSSRVSPVPNGGSQWGAISKSFNPVFGSSKKFFSASVPGSRIVSRATSPISRRASPPRS 846

Query: 806 SITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLK 865
           +    +   L + ++  + +K+TND+ +QE   L+AQ+E+LTRK+Q  EVE+ERT+++LK
Sbjct: 847 TTPTPTLGGLTSPKIAVDDAKRTNDSLSQEVVKLKAQVENLTRKAQLQEVEMERTTKQLK 906

Query: 866 ETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
           E    A  EA K  AA+EVI SLTAQ +
Sbjct: 907 EALAFAAAEATKCNAAKEVIMSLTAQLK 934


>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
          Length = 1103

 Score =  957 bits (2473), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 515/926 (55%), Positives = 658/926 (71%), Gaps = 46/926 (4%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           VERD EQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEEK LKLSHVSRI
Sbjct: 14  VERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESILIWFSGKEEKHLKLSHVSRI 73

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN---- 125
           I GQRT +FQRYP+PEKE QSFSLIY  RSLDLICKDKDE E+WF+ L+ALIS  +    
Sbjct: 74  ISGQRTPIFQRYPRPEKECQSFSLIYNERSLDLICKDKDETEVWFSGLKALISRIHNRKW 133

Query: 126 RCKSRSDSISSD--SPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           R +SRSD + S+  SPR+ TQ++SP H    S+D   K+ G+   +   Y + P+  L K
Sbjct: 134 RTESRSDGMLSEVNSPRTFTQRSSPLHSPFSSNDSVQKEGGEPIRLHSPYGSPPKYGLDK 193

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTA--DSFRISLSSAVSSSS 241
           A S+V+ +    K +  ++S S S++ ++SGG D  +    T   D+FR+SLSSAVSSSS
Sbjct: 194 ALSDVMLYNIPPKGFFHSDSASGSVHSLSSGGSDSMHGHMKTVPMDAFRVSLSSAVSSSS 253

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
           QGS ++D D LGDVFIWGEG G G+LGG    V  S   + D+LLPK LES VVLD Q+I
Sbjct: 254 QGSGNDDCDALGDVFIWGEGTGEGVLGGGTRRVGSSFDSKIDSLLPKALESVVVLDVQNI 313

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           ACG++HA LVTKQG++FSWGE  GG+LGHG ++D  +PKLIDAL+  NI +VACGE+HTC
Sbjct: 314 ACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTC 373

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AVTLSGDLYTWGDG +N GLLG   ++SHW+P++V+G ++GL ISSI CGPWHTA +TSA
Sbjct: 374 AVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGLHISSISCGPWHTALVTSA 433

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           GKLFTFGDGTFG LGHGDR S S+PREVE+LK L+TV A+CGVWHTAA+VEV      SN
Sbjct: 434 GKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSN 493

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             SS KLFTWGDG +G+LGHGD E R+VP CV    + +FC+VACGHS+T+ALT +G ++
Sbjct: 494 NNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEPNFCQVACGHSLTVALTNSGHIY 553

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           +MGS  YGQLG+P + GK P R+EG +   ++E++ACG+YH+AV++S++EVYTWGKGANG
Sbjct: 554 TMGSPVYGQLGNPQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANG 613

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           +LGHG  +++ TPTLVEAL+DKQVKS+ CG+NFTAAICLHK VS  D S+CSGCR  FNF
Sbjct: 614 RLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNF 673

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDC------FIKLNTTSES-- 713
           +R+RHNCYNCGLV+C  CSSKKS+K ++AP  NK YRVCD+C      FI+++T+S+S  
Sbjct: 674 KRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKVYRVCDNCYHKLKKFIEMDTSSQSSL 733

Query: 714 --------GSNSQI---------PRNSSGLFQNCKRVTEKENMNSR-------SATDGQS 749
                   GS   +         PR+      + +   + E+  S+       S++    
Sbjct: 734 SRRGSINQGSTEPVNKNDKLDLKPRSQLARLPSVESFKQVESQFSKKNKKLEFSSSRVSP 793

Query: 750 KPKGKSYHASPSLNGKFQWEPNSDFIKSNK-ISASPPGSRRVSRAP-SPISRKSSPACSI 807
            P G S   S +++  F    N  F  S K  +AS PGSR VSRA      R S P  + 
Sbjct: 794 IPSGGSQRGSLNISKSF----NPVFGSSKKFFAASLPGSRIVSRATSPISRRPSPPRSTT 849

Query: 808 TMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKET 867
              +   L +  +    +K TN+  +QE   LRAQ+E+LTRK+Q  EVELERTS++LKE 
Sbjct: 850 PTPTLGGLTSPRIAVNDAKSTNNRLSQEVIRLRAQVENLTRKAQLQEVELERTSKQLKEA 909

Query: 868 TQIAQEEAEKNKAAQEVIRSLTAQAR 893
             IA EEA +  AA+EVI+SLTAQ +
Sbjct: 910 ISIASEEAARCNAAKEVIKSLTAQLK 935


>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
           sativus]
          Length = 806

 Score =  953 bits (2464), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 504/859 (58%), Positives = 622/859 (72%), Gaps = 70/859 (8%)

Query: 1   MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ 60
           MA  Q+  L +RD EQA+  LKKG +LLKYGRRGKPKFCPFRLSSDE LL+WY+GK+EKQ
Sbjct: 1   MADTQKVGLAQRDIEQAIIALKKGAHLLKYGRRGKPKFCPFRLSSDESLLVWYSGKDEKQ 60

Query: 61  LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRAL 120
           LKLS VS+IIPGQRTA+FQ+YPQPEKEYQSFSL+Y +RSLDLICKDKDEAE+WF  L+AL
Sbjct: 61  LKLSLVSKIIPGQRTAIFQQYPQPEKEYQSFSLLYNDRSLDLICKDKDEAEVWFVGLKAL 120

Query: 121 ISEDN----RCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENS 176
           I+  N    R +SR +S+SSDSP +  ++NSPS        +T  D GD     V+YEN+
Sbjct: 121 ITRGNHRKWRVESRCESVSSDSPHARLRRNSPS--------ITPCDPGDLDG--VSYENT 170

Query: 177 PQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSA 236
            QNRLGKAFSE+LS+TA +K  ++ +S+      +++  +D++N R S ++ FR+SLSSA
Sbjct: 171 GQNRLGKAFSELLSYTAVSKGTSQPKSIVNP--SLSTALIDNSNGRISASEGFRVSLSSA 228

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVN--GVEISSADRRDALLPKVLESTV 294
           VSSSSQGSC EDFD LGDV+IWGEG+G+GLLGG VN  G + S   + DALLPK LESTV
Sbjct: 229 VSSSSQGSCPEDFDALGDVYIWGEGIGDGLLGGGVNKVGSQCSLNSKLDALLPKALESTV 288

Query: 295 VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA 354
           VLD   IACG +HAVLVT+QG+IFSWGE SGG+LGHGVEADVS+PK+ID L+G+N+ +VA
Sbjct: 289 VLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVA 348

Query: 355 CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
           CGE+HTCAVTLSGDLYTWGDG HN GLLG  SE+SHWIP+KVSGQMEG+++S I CG WH
Sbjct: 349 CGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWH 408

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           TA +TSAG+LFTFGDG+FGALGHGD  +++ PREVETL+ L+T   +CGVWHTAA VE  
Sbjct: 409 TAVVTSAGQLFTFGDGSFGALGHGDHITSNFPREVETLRGLRTTKVACGVWHTAAAVEAI 468

Query: 475 GKTSGSN---GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
            + S S      SS+KL+TWGDG +G+LGHGD EPR+VP CV    +   C+VACG+ +T
Sbjct: 469 NELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALMEERICQVACGNDLT 528

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
           +ALT  G+V++MGS  YGQLGS  + GK PT +EG I + ++E++ACGSYH+AV++SK+E
Sbjct: 529 VALTTAGRVYTMGSTAYGQLGSATANGKLPTCVEGEIANSFVEEVACGSYHVAVLTSKNE 588

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSI 651
           VYTWGKG NGQLGHGDN ++ TPT+V+ L+DKQVK+V CGS FT  IC+HK VS ADHS+
Sbjct: 589 VYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKNVACGSKFTVVICIHKWVSSADHSV 648

Query: 652 CSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTS 711
           CSGC N F FRR+RHNCYNCGLV+CK CSSKKS+K +LAP +NKPYRVCDDCF KL    
Sbjct: 649 CSGCHNPFGFRRKRHNCYNCGLVFCKACSSKKSLKASLAPNLNKPYRVCDDCFNKLKKIM 708

Query: 712 ESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPN 771
           ES S SQ                     N+R+ T       G  ++ S  +  K  W P 
Sbjct: 709 ESSSVSQ---------------------NARART-------GNIHYKSNGVMDKETWVPK 740

Query: 772 --------SDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFE 823
                   S F   N  +A    SR  SRA SP+   SSP           + +SE   E
Sbjct: 741 LQATLSRLSSFGAIN--NAESMHSRLASRATSPVLGTSSP-----------IRSSEDFSE 787

Query: 824 YSKQTNDNFNQEPDVLRAQ 842
            SK+ ND   QE   LRAQ
Sbjct: 788 DSKRANDTLTQEIISLRAQ 806


>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
          Length = 1109

 Score =  951 bits (2458), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/923 (56%), Positives = 665/923 (72%), Gaps = 40/923 (4%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           VERD EQA+  LKKG  LLKYGRRG+PK CPFRLS+DE +LIW++GKEEK LKLS VSRI
Sbjct: 17  VERDIEQAITALKKGACLLKYGRRGRPKICPFRLSNDESVLIWFSGKEEKHLKLSQVSRI 76

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN---- 125
           I GQRT +FQRYP+PEKEYQSFSLIY +RSLDLICKDKDEAE+WF+ L+ALIS  +    
Sbjct: 77  ISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALISRSHHRKW 136

Query: 126 RCKSRSDSISSD--SPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           R +SRSD I S+  SPR++T+++SP +    S++   KDSGD   +   YE+ P+N L K
Sbjct: 137 RTESRSDGIPSEANSPRTYTRRSSPMNSPFGSNESLQKDSGDHLRLHSPYESPPKNGLDK 196

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTA--DSFRISLSSAVSSSS 241
           A   VL +    K +   +S S S++ V+SGG D  + +  T   D+FR+SLSSAVS+SS
Sbjct: 197 ALDVVL-YAVPQKGFFPPDSASASVHSVSSGGSDSMHGQMKTMGMDAFRVSLSSAVSTSS 255

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
           QGS H+D D LGDVFIWGEG G+G+LGG  + V      + D+L PK LES VVLD Q+I
Sbjct: 256 QGSGHDDGDALGDVFIWGEGTGDGVLGGGNHRVGSCLGVKMDSLFPKSLESAVVLDVQNI 315

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           ACG +HA LVTKQG+IFSWGE +GG+LGHGV++DV +PKLI+AL+ +NI +VACGE+HTC
Sbjct: 316 ACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHTC 375

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AVTLSGDLYTWG+G +N GLLG  +++SHW+P++V+G +EG+ +S I CGPWHTA +TSA
Sbjct: 376 AVTLSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNGPLEGIHVSYISCGPWHTAVVTSA 435

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+LFTFGDGTFGALGHGDR S S+PREVE+LK L+TV A+CGVWHTAA+VEV    S S+
Sbjct: 436 GQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 495

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK-VSDDISFCKVACGHSITIALTATGQV 540
             SS KLFTWGDG +G+LGHGD E ++VP  V  V+   +FC+VACGHS+T+ALT  G V
Sbjct: 496 NCSSGKLFTWGDGDKGRLGHGDKEAKLVPTRVALVNVKPNFCQVACGHSLTVALTTKGHV 555

Query: 541 FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
           ++MGS  YGQLG P + GK P  +E  +   ++E+IACG+YH+AV++S++EVYTWGKGAN
Sbjct: 556 YTMGSPVYGQLGIPQADGKLPICVEWKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGAN 615

Query: 601 GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFN 660
           G+LGHGD +++ TPTLVEAL+DK VKS+ CG+NFTAAICLHK VS  D S+CSGCR  FN
Sbjct: 616 GRLGHGDTDDRNTPTLVEALKDKDVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRMPFN 675

Query: 661 FRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIP 720
           F+R+RHNCYNCGLV+C  CSSKKS+K ++AP  NKPYRVCD+CF KL  T E+ S+S   
Sbjct: 676 FKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDNCFNKLRKTVETDSSSHSS 735

Query: 721 RNSSGLFQN--CKRVTEKENMNSRS--------------ATDGQSKPKGK-----SYHAS 759
            +  G+      + + + + ++SRS                + +S  K K     S   S
Sbjct: 736 VSRRGVANQGPLELIDKDDKLDSRSRNQLARFSSMESFKQVESRSSKKNKKLEFNSSRVS 795

Query: 760 PSLNGKFQWEP-------NSDFIKSNK-ISASPPGSRRVSRAP-SPISRKSSPACSITMN 810
           P  NG  QW         N  F  S K  SAS PGSR VSRA      R S P  +    
Sbjct: 796 PIPNGGSQWGASNISKSFNPVFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTP 855

Query: 811 SFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQI 870
           +   L +  ++ + +K+TND+ +QE   LR+Q+E+LTRK+Q  EVELERT+++LK+   I
Sbjct: 856 TLGGLTSPNIVVDDAKRTNDSLSQEVIKLRSQVENLTRKAQLQEVELERTTKQLKDAIAI 915

Query: 871 AQEEAEKNKAAQEVIRSLTAQAR 893
           A EE  K KAA+EVI+SLTAQ +
Sbjct: 916 AGEETAKCKAAKEVIKSLTAQLK 938


>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101226798 [Cucumis sativus]
          Length = 1103

 Score =  947 bits (2449), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 513/926 (55%), Positives = 656/926 (70%), Gaps = 46/926 (4%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           VERD EQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEEK LKLSHVSRI
Sbjct: 14  VERDVEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESILIWFSGKEEKHLKLSHVSRI 73

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN---- 125
           I GQRT +FQRYP+PEKE QSFSLIY  RSLDLICKDKDE E+WF+ L+ALIS  +    
Sbjct: 74  ISGQRTPIFQRYPRPEKECQSFSLIYNERSLDLICKDKDETEVWFSGLKALISRIHNRKW 133

Query: 126 RCKSRSDSISSD--SPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           R +SRSD + S+  SPR+ TQ++SP H    S+D   K+ G+   +   Y + P+  L K
Sbjct: 134 RTESRSDGMLSEVNSPRTFTQRSSPLHSPFSSNDSVQKEGGEPIRLHSPYGSPPKYGLDK 193

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTA--DSFRISLSSAVSSSS 241
           A S+V+ +    K +  ++S S S++ ++SGG D  +    T   D+FR+SLSSAVSSSS
Sbjct: 194 ALSDVMLYNIPPKGFFHSDSASGSVHSLSSGGSDSMHGHMKTVPMDAFRVSLSSAVSSSS 253

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
           QGS ++D D LGD F  GEG G G+LGG    V  S   + D+LLPK LES VVLD Q+I
Sbjct: 254 QGSGNDDCDALGDXFYLGEGTGEGVLGGGTRRVGSSFDSKIDSLLPKALESVVVLDVQNI 313

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           ACG++HA LVTKQG++FSWGE  GG+LGHG ++D  +PKLIDAL+  NI +VACGE+HTC
Sbjct: 314 ACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTC 373

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AVTLSGDLYTWGDG +N GLLG   ++SHW+P++V+G ++GL ISSI CGPWHTA +TSA
Sbjct: 374 AVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGLHISSISCGPWHTALVTSA 433

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           GKLFTFGDGTFG LGHGDR S S+PREVE+LK L+TV A+CGVWHTAA+VEV      SN
Sbjct: 434 GKLFTFGDGTFGVLGHGDRDSISIPREVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSN 493

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             SS KLFTWGDG +G+LGHGD E R+VP CV    + +FC+VACGHS+T+ALT +G ++
Sbjct: 494 NNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEPNFCQVACGHSLTVALTNSGHIY 553

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           +MGS  YGQLG+P + GK P R+EG +   ++E++ACG+YH+AV++S++EVYTWGKGANG
Sbjct: 554 TMGSPVYGQLGNPQADGKLPARVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANG 613

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           +LGHG  +++ TPTLVEAL+DKQVKS+ CG+NFTAAICLHK VS  D S+CSGCR  FNF
Sbjct: 614 RLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAICLHKWVSGVDQSMCSGCRLPFNF 673

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDC------FIKLNTTSES-- 713
           +R+RHNCYNCGLV+C  CSSKKS+K ++AP  NK YRVCD+C      FI+++T+S+S  
Sbjct: 674 KRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKVYRVCDNCYHKLXKFIEMDTSSQSSL 733

Query: 714 ---GSNSQ--------------IPRNSSGLFQNCKRVTEKENMNSR-------SATDGQS 749
              GS +Q               PR+      + +   + E+  S+       S++    
Sbjct: 734 SRRGSINQGSMEPVNKNDKLDLKPRSQLARLPSVESFKQVESQFSKKNKKLEFSSSRVSP 793

Query: 750 KPKGKSYHASPSLNGKFQWEPNSDFIKSNK-ISASPPGSRRVSRAP-SPISRKSSPACSI 807
            P G S   S +++  F    N  F  S K  +AS PGSR VSRA      R S P  + 
Sbjct: 794 IPSGGSQRGSLNISKSF----NPVFGSSKKFFAASLPGSRIVSRATSPISRRPSPPRSTT 849

Query: 808 TMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKET 867
              +   L +  +    +K TN+  +QE   LRAQ+E+LTRK+Q  EVELERTS++LKE 
Sbjct: 850 PTPTLGGLTSPRIAVNDAKSTNNRLSQEVIRLRAQVENLTRKAQLQEVELERTSKQLKEA 909

Query: 868 TQIAQEEAEKNKAAQEVIRSLTAQAR 893
             IA EEA +  AA+EVI+SLTAQ +
Sbjct: 910 ISIASEEAARCNAAKEVIKSLTAQLK 935


>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
          Length = 1093

 Score =  946 bits (2446), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 515/920 (55%), Positives = 655/920 (71%), Gaps = 39/920 (4%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           VERD EQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEEK L+LS VSRI
Sbjct: 17  VERDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLRLSQVSRI 76

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN---- 125
           +PGQRTA+FQRYP+PEKE QSFSLI  +RSLD+ICKDKDEAE+WF  L+ LIS  +    
Sbjct: 77  VPGQRTAIFQRYPRPEKECQSFSLISHDRSLDIICKDKDEAEVWFAGLKTLISHSHQRKW 136

Query: 126 RCKSRSDSISS--DSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           R +SRSD ISS   SPR++T+++SP      S+D  +KD  D   +   + + P+N L K
Sbjct: 137 RTESRSDIISSGATSPRTYTRRSSPLSSPFSSNDSVHKDGSDHYRLRSPFGSPPKNALDK 196

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANS--RSSTADSFRISLSSAVSSSS 241
           AFS+V+ +    K +  ++S + S++ ++SG  D+ N   R    D+FR+S SSA+SSSS
Sbjct: 197 AFSDVVLYAVPPKGFFPSDSNAGSVHSMSSGHSDNTNGHPRGIPMDAFRVSYSSAISSSS 256

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
            GS H+D D LGDVFIWGEG G G+LGG  + V  SS+ + D L+PK LE  V LD Q+I
Sbjct: 257 HGSGHDDGDALGDVFIWGEGTGEGILGGGSSRVGSSSSAKMDYLVPKPLEFAVRLDVQNI 316

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           +CG +HA LVTKQG+I+SWGE SGG+LGHGV+ DV+ PKLID+L   NI +VACGE+HTC
Sbjct: 317 SCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTC 376

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AVTLSGDLYTWGDG    GLLG  +++SHW+P++V G +EG+ +SSI CGPWHTA +TSA
Sbjct: 377 AVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSA 436

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+LFTFGDG+FG LGHGDR+S SVPREVE+LK L+TV A+CGVWHTAA+VEV    S S+
Sbjct: 437 GQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 496

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             SS K+FTWGDG +G+LGHGD + R VP CV    + +FC+VACGH +T+ALT +G V+
Sbjct: 497 NCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVY 556

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           +MGSA YGQLG+P + G  P R+EG +   ++E+I+CG+YH+AV++S++EVYTWGKGANG
Sbjct: 557 TMGSAVYGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANG 616

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           +LGHG  ++K TPTLVEAL+DKQV+SVVCG NFTAAIC+HK VS +D S+CSGCR  FN 
Sbjct: 617 RLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWVSGSDQSMCSGCRQPFNL 676

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPR 721
           RR+RHNCYNC LV+C  CSSKKS+K +LAP  NKPYRVCD C+ KL    E+ +NS   R
Sbjct: 677 RRKRHNCYNCALVFCHSCSSKKSLKASLAPNPNKPYRVCDSCYSKLTKGLETDTNSSTKR 736

Query: 722 NSSGLFQNCKRVTEKE-------------------NMNSRSATDGQSKPKGKSYHASPSL 762
            +  + Q      E+E                   NM+SR +   + K +  S   SP  
Sbjct: 737 GT--VVQGFSETNEEELETRSNTQLLRLSSMESFKNMDSRYSKKNK-KFEFNSTRVSPVP 793

Query: 763 NGKFQWEP-------NSDFIKSNK-ISASPPGSRRVSRAPSPI-SRKSSPACSITMNSFT 813
           NG   W         N  F  S K  SAS PGSR VSRA SP+  R S P  +    +  
Sbjct: 794 NGSSHWSGLNISRSFNPVFGSSKKFFSASVPGSRIVSRATSPVSRRTSPPRSTTPTPTLG 853

Query: 814 DLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQE 873
            L +  VI   +K TND+ + E   LR+Q+E+LTRKS  LEVELERT+++LKE   IA E
Sbjct: 854 GLTSPRVIANDAKPTNDSLSHEVLNLRSQVENLTRKSHLLEVELERTTKQLKEAIVIAGE 913

Query: 874 EAEKNKAAQEVIRSLTAQAR 893
           E  K KAA+EVI+SLTAQ +
Sbjct: 914 ETAKCKAAKEVIKSLTAQLK 933


>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
          Length = 1093

 Score =  946 bits (2445), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 515/920 (55%), Positives = 655/920 (71%), Gaps = 39/920 (4%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           VERD EQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEEK L+LS VSRI
Sbjct: 17  VERDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLRLSQVSRI 76

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN---- 125
           +PGQRTA+FQRYP+PEKE QSFSLI  +RSLD+ICKDKDEAE+WF  L+ LIS  +    
Sbjct: 77  VPGQRTAIFQRYPRPEKECQSFSLISHDRSLDIICKDKDEAEVWFAGLKTLISHSHQRKW 136

Query: 126 RCKSRSDSISS--DSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           R +SRSD ISS   SPR++T+++SP      S+D  +KD  D   +   + + P+N L K
Sbjct: 137 RTESRSDIISSGATSPRTYTRRSSPLSSPFSSNDSVHKDGSDHYRLRSPFGSPPKNALDK 196

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANS--RSSTADSFRISLSSAVSSSS 241
           AFS+V+ +    K +  ++S + S++ ++SG  D+ N   R    D+FR+S SSA+SSSS
Sbjct: 197 AFSDVVLYAVPPKGFFPSDSNAGSVHSMSSGHSDNTNGHPRGIPMDAFRVSYSSAISSSS 256

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
            GS H+D D LGDVFIWGEG G G+LGG  + V  SS+ + D L+PK LE  V LD Q+I
Sbjct: 257 HGSGHDDGDALGDVFIWGEGTGEGILGGGSSRVGSSSSAKMDYLVPKPLEFAVRLDVQNI 316

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           +CG +HA LVTKQG+I+SWGE SGG+LGHGV+ DV+ PKLID+L   NI +VACGE+HTC
Sbjct: 317 SCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTC 376

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AVTLSGDLYTWGDG    GLLG  +++SHW+P++V G +EG+ +SSI CGPWHTA +TSA
Sbjct: 377 AVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSA 436

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+LFTFGDG+FG LGHGDR+S SVPREVE+LK L+TV A+CGVWHTAA+VEV    S S+
Sbjct: 437 GQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 496

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             SS K+FTWGDG +G+LGHGD + R VP CV    + +FC+VACGH +T+ALT +G V+
Sbjct: 497 NCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVY 556

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           +MGSA YGQLG+P + G  P R+EG +   ++E+I+CG+YH+AV++S++EVYTWGKGANG
Sbjct: 557 TMGSAVYGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANG 616

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           +LGHG  ++K TPTLVEAL+DKQV+SVVCG NFTAAIC+HK VS +D S+CSGCR  FN 
Sbjct: 617 RLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWVSGSDQSMCSGCRQPFNL 676

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPR 721
           RR+RHNCYNC LV+C  CSSKKS+K +LAP  NKPYRVCD C+ KL    E+ +NS   R
Sbjct: 677 RRKRHNCYNCALVFCHSCSSKKSLKASLAPNPNKPYRVCDSCYSKLTKGLETDTNSSTKR 736

Query: 722 NSSGLFQNCKRVTEKE-------------------NMNSRSATDGQSKPKGKSYHASPSL 762
            +  + Q      E+E                   NM+SR +   + K +  S   SP  
Sbjct: 737 GT--VVQGFSETNEEELETRSNTQLSRLSSMESFKNMDSRYSKKNK-KFEFNSTRVSPVP 793

Query: 763 NGKFQWEP-------NSDFIKSNK-ISASPPGSRRVSRAPSPI-SRKSSPACSITMNSFT 813
           NG   W         N  F  S K  SAS PGSR VSRA SP+  R S P  +    +  
Sbjct: 794 NGSSHWSGLNISRSFNPVFGSSKKFFSASVPGSRIVSRATSPVSRRTSPPRSTTPTPTLG 853

Query: 814 DLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQE 873
            L +  VI   +K TND+ + E   LR+Q+E+LTRKS  LEVELERT+++LKE   IA E
Sbjct: 854 GLTSPRVIANDAKPTNDSLSHEVLNLRSQVENLTRKSHLLEVELERTTKQLKEAIVIAGE 913

Query: 874 EAEKNKAAQEVIRSLTAQAR 893
           E  K KAA+EVI+SLTAQ +
Sbjct: 914 ETAKCKAAKEVIKSLTAQLK 933


>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 1091

 Score =  946 bits (2445), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 515/918 (56%), Positives = 654/918 (71%), Gaps = 39/918 (4%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           VERD EQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEEK L+LS VSRI
Sbjct: 17  VERDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLRLSQVSRI 76

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN---- 125
           +PGQRTA+FQRYP+PEKE QSFSLI  +RSLD+ICKDKDEAE+WF  L+ LIS  +    
Sbjct: 77  VPGQRTAIFQRYPRPEKECQSFSLISHDRSLDIICKDKDEAEVWFAGLKTLISHSHQRKW 136

Query: 126 RCKSRSDSISS--DSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           R +SRSD ISS   SPR++T+++SP      S+D  +KD  D   +   + + P+N L K
Sbjct: 137 RTESRSDIISSGATSPRTYTRRSSPLSSPFSSNDSVHKDGSDHYRLRSPFGSPPKNALDK 196

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANS--RSSTADSFRISLSSAVSSSS 241
           AFS+V+ +    K +  ++S + S++ ++SG  D+ N   R    D+FR+S SSA+SSSS
Sbjct: 197 AFSDVVLYAVPPKGFFPSDSNAGSVHSMSSGHSDNTNGHPRGIPMDAFRVSYSSAISSSS 256

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
            GS H+D D LGDVFIWGEG G G+LGG  + V  SS+ + D L+PK LE  V LD Q+I
Sbjct: 257 HGSGHDDGDALGDVFIWGEGTGEGILGGGSSRVGSSSSAKMDYLVPKPLEFAVRLDVQNI 316

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           +CG +HA LVTKQG+I+SWGE SGG+LGHGV+ DV+ PKLID+L   NI +VACGE+HTC
Sbjct: 317 SCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTC 376

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AVTLSGDLYTWGDG    GLLG  +++SHW+P++V G +EG+ +SSI CGPWHTA +TSA
Sbjct: 377 AVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSA 436

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+LFTFGDG+FG LGHGDR+S SVPREVE+LK L+TV A+CGVWHTAA+VEV    S S+
Sbjct: 437 GQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 496

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             SS K+FTWGDG +G+LGHGD + R VP CV    + +FC+VACGH +T+ALT +G V+
Sbjct: 497 NCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVY 556

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           +MGSA YGQLG+P + G  P R+EG +   ++E+I+CG+YH+AV++S++EVYTWGKGANG
Sbjct: 557 TMGSAVYGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANG 616

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           +LGHG  ++K TPTLVEAL+DKQV+SVVCG NFTAAIC+HK VS +D S+CSGCR  FN 
Sbjct: 617 RLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWVSGSDQSMCSGCRQPFNL 676

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPR 721
           RR+RHNCYNC LV+C  CSSKKS+K +LAP  NKPYRVCD C+ KL    E+ +NS   R
Sbjct: 677 RRKRHNCYNCALVFCHSCSSKKSLKASLAPNPNKPYRVCDSCYSKLTKGLETDTNSSTKR 736

Query: 722 NSSGLFQNCKRVTEKE-------------------NMNSRSATDGQSKPKGKSYHASPSL 762
            +  + Q      E+E                   NM+SR +   + K +  S   SP  
Sbjct: 737 GT--VVQGFSETNEEELETRSNTQLSRLSSMESFKNMDSRYSKKNK-KFEFNSTRVSPVP 793

Query: 763 NGKFQWEP-------NSDFIKSNK-ISASPPGSRRVSRAPSPI-SRKSSPACSITMNSFT 813
           NG   W         N  F  S K  SAS PGSR VSRA SP+  R S P  +    +  
Sbjct: 794 NGSSHWSGLNISRSFNPVFGSSKKFFSASVPGSRIVSRATSPVSRRTSPPRSTTPTPTLG 853

Query: 814 DLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQE 873
            L +  VI   +K TND+ + E   LR+Q+E+LTRKS  LEVELERT+++LKE   IA E
Sbjct: 854 GLTSPRVIANDAKPTNDSLSHEVLNLRSQVENLTRKSHLLEVELERTTKQLKEAIVIAGE 913

Query: 874 EAEKNKAAQEVIRSLTAQ 891
           E  K KAA+EVI+SLTAQ
Sbjct: 914 ETAKCKAAKEVIKSLTAQ 931


>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
 gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
          Length = 1133

 Score =  946 bits (2444), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 515/920 (55%), Positives = 655/920 (71%), Gaps = 39/920 (4%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           VERD EQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEEK L+LS VSRI
Sbjct: 17  VERDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLRLSQVSRI 76

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN---- 125
           +PGQRTA+FQRYP+PEKE QSFSLI  +RSLD+ICKDKDEAE+WF  L+ LIS  +    
Sbjct: 77  VPGQRTAIFQRYPRPEKECQSFSLISHDRSLDIICKDKDEAEVWFAGLKTLISHSHQRKW 136

Query: 126 RCKSRSDSISS--DSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           R +SRSD ISS   SPR++T+++SP      S+D  +KD  D   +   + + P+N L K
Sbjct: 137 RTESRSDIISSGATSPRTYTRRSSPLSSPFSSNDSVHKDGSDHYRLRSPFGSPPKNALDK 196

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANS--RSSTADSFRISLSSAVSSSS 241
           AFS+V+ +    K +  ++S + S++ ++SG  D+ N   R    D+FR+S SSA+SSSS
Sbjct: 197 AFSDVVLYAVPPKGFFPSDSNAGSVHSMSSGHSDNTNGHPRGIPMDAFRVSYSSAISSSS 256

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
            GS H+D D LGDVFIWGEG G G+LGG  + V  SS+ + D L+PK LE  V LD Q+I
Sbjct: 257 HGSGHDDGDALGDVFIWGEGTGEGILGGGSSRVGSSSSAKMDYLVPKPLEFAVRLDVQNI 316

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           +CG +HA LVTKQG+I+SWGE SGG+LGHGV+ DV+ PKLID+L   NI +VACGE+HTC
Sbjct: 317 SCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTC 376

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AVTLSGDLYTWGDG    GLLG  +++SHW+P++V G +EG+ +SSI CGPWHTA +TSA
Sbjct: 377 AVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIHVSSISCGPWHTALVTSA 436

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+LFTFGDG+FG LGHGDR+S SVPREVE+LK L+TV A+CGVWHTAA+VEV    S S+
Sbjct: 437 GQLFTFGDGSFGVLGHGDRASLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 496

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             SS K+FTWGDG +G+LGHGD + R VP CV    + +FC+VACGH +T+ALT +G V+
Sbjct: 497 NCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALTTSGHVY 556

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           +MGSA YGQLG+P + G  P R+EG +   ++E+I+CG+YH+AV++S++EVYTWGKGANG
Sbjct: 557 TMGSAVYGQLGNPQADGLLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANG 616

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           +LGHG  ++K TPTLVEAL+DKQV+SVVCG NFTAAIC+HK VS +D S+CSGCR  FN 
Sbjct: 617 RLGHGGTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWVSGSDQSMCSGCRQPFNL 676

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPR 721
           RR+RHNCYNC LV+C  CSSKKS+K +LAP  NKPYRVCD C+ KL    E+ +NS   R
Sbjct: 677 RRKRHNCYNCALVFCHSCSSKKSLKASLAPNPNKPYRVCDSCYSKLTKGLETDTNSSTKR 736

Query: 722 NSSGLFQNCKRVTEKE-------------------NMNSRSATDGQSKPKGKSYHASPSL 762
            +  + Q      E+E                   NM+SR +   + K +  S   SP  
Sbjct: 737 GT--VVQGFSETNEEELETRSNTQLSRLSSMESFKNMDSRYSKKNK-KFEFNSTRVSPVP 793

Query: 763 NGKFQWEP-------NSDFIKSNK-ISASPPGSRRVSRAPSPI-SRKSSPACSITMNSFT 813
           NG   W         N  F  S K  SAS PGSR VSRA SP+  R S P  +    +  
Sbjct: 794 NGSSHWSGLNISRSFNPVFGSSKKFFSASVPGSRIVSRATSPVSRRTSPPRSTTPTPTLG 853

Query: 814 DLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQE 873
            L +  VI   +K TND+ + E   LR+Q+E+LTRKS  LEVELERT+++LKE   IA E
Sbjct: 854 GLTSPRVIANDAKPTNDSLSHEVLNLRSQVENLTRKSHLLEVELERTTKQLKEAIVIAGE 913

Query: 874 EAEKNKAAQEVIRSLTAQAR 893
           E  K KAA+EVI+SLTAQ +
Sbjct: 914 ETAKCKAAKEVIKSLTAQLK 933


>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1100

 Score =  945 bits (2443), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 506/925 (54%), Positives = 665/925 (71%), Gaps = 48/925 (5%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           V RD EQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEEK LKLSHVSRI
Sbjct: 13  VTRDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLKLSHVSRI 72

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN---- 125
           I GQRT +FQRYP+PEKEYQSFSLIY  RSLD+ICKDKDEAE+WF+ L+ALIS  +    
Sbjct: 73  ISGQRTPIFQRYPRPEKEYQSFSLIYDERSLDVICKDKDEAEVWFSGLKALISRCHQRKW 132

Query: 126 RCKSRSDSISSD--SPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           R +SRSD   S+  SPR++T+++SP H    S++   K+  +   +   YE+ P+N + K
Sbjct: 133 RTESRSDGTPSEANSPRTYTRRSSPLHSPFSSNESFQKEGSNHLRLHSPYESPPKNGIDK 192

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLD--DANSRSSTADSFRISLSSAVSSSS 241
           AFS++  +    K +   +S + S++ ++SGGLD    + +    D+FR+SLSSA+SSSS
Sbjct: 193 AFSDMSLYAVPPKGFFPPDSATMSVHSLSSGGLDTLHGHMKGMGMDAFRVSLSSAISSSS 252

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
            GS H+D D LGDVF+WGEG+G G+LGG    V  S   + D+LLPK LEST+VLD Q I
Sbjct: 253 HGSGHDDGDTLGDVFMWGEGIGEGVLGGGNYRVGSSLEIKMDSLLPKALESTIVLDVQYI 312

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           ACG +HAVLVTKQG+ FSWGE S G+LGHGV+++V +PKLIDAL+ +NI +VACGE+H+C
Sbjct: 313 ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALSTTNIELVACGEYHSC 372

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AVTLSGDLYTWG G  + G+LG  +E+SHW+P++V+  MEG+ +SSI CGP+HTA +TSA
Sbjct: 373 AVTLSGDLYTWGKG--DFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSA 430

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+LFTFGDGTFG LGHGDR S  +PREV++LK L+TV A+CGVWHTAA+VEV   +S S+
Sbjct: 431 GQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 490

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             SS KLFTWGDG + +LGHGD EP++VP CV    + +FC+VACGHS+T+ALT +G V+
Sbjct: 491 NCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVY 550

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           +MGS  YGQLG+P + GK PTR+EG +   ++E+IACG+YH+AV++S++EVYTWGKG+NG
Sbjct: 551 TMGSPVYGQLGNPHADGKVPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 610

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           +LGHGD +++ +PTLVE+L+DKQVKS+ CGSNFTAA+CLHK  S  D S+CSGCR  FNF
Sbjct: 611 RLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVCLHKWASGMDQSMCSGCRQPFNF 670

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSES--GSNSQI 719
           +R+RHNCYNCGLV+C  C++KKS+K  +AP  NKPYRVCD CF KL    E+   S+S +
Sbjct: 671 KRKRHNCYNCGLVFCHSCTNKKSLKACMAPNPNKPYRVCDRCFNKLKKAMETDPSSHSSL 730

Query: 720 PRNSSGLFQNCKRVTEKENMNSRS--------------ATDGQSK--------------- 750
            R  S + Q    +   E +++RS                D +SK               
Sbjct: 731 SRRES-VNQGSDAIDRDEKLDTRSDGQLARFSLLEPMRQVDSRSKKNKKYEFNSSRVSPI 789

Query: 751 PKGKSYHASPSLNGKFQWEPNSDFIKSNK-ISASPPGSRRVSRAP-SPISRKSSPACSIT 808
           P G S+  S ++   F    N  F  S K  SAS PGSR VSRA      R S P  +  
Sbjct: 790 PSGGSHRGSLNITKSF----NPTFGSSKKFFSASVPGSRIVSRATSPISRRPSPPRSTTP 845

Query: 809 MNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETT 868
             + + L   +++ + +K+TNDN +QE  +LR+Q+E+LTRK+Q  EVELERT+ +LKE  
Sbjct: 846 TPTLSGLTTQKIVVDDTKRTNDNLSQEVVMLRSQVENLTRKAQLQEVELERTTEQLKEAL 905

Query: 869 QIAQEEAEKNKAAQEVIRSLTAQAR 893
            IA EE+ + KAA+EVI+SLTAQ +
Sbjct: 906 AIASEESARCKAAKEVIKSLTAQLK 930


>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
 gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
          Length = 1086

 Score =  945 bits (2442), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 513/914 (56%), Positives = 657/914 (71%), Gaps = 33/914 (3%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           VERD EQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEEKQL+LSHVSRI
Sbjct: 16  VERDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESILIWFSGKEEKQLRLSHVSRI 75

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN---- 125
           IPGQRTA+FQRYP+PEKE QSFSLI  +RSLD+ICKDKDEAE+WF  L+ LI+  +    
Sbjct: 76  IPGQRTAIFQRYPRPEKECQSFSLISHDRSLDIICKDKDEAEVWFAGLKTLITRSHQRKW 135

Query: 126 RCKSRSDSISS--DSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           R +SRSD +SS   SPR++T+++SP      S+D  +KD  +   +   + + P+  L K
Sbjct: 136 RTESRSDMLSSGTTSPRTYTRRSSPLSSPFSSNDSVHKDGVENYRLRSPFGSPPKVGLEK 195

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDAN--SRSSTADSFRISLSSAVSSSS 241
           AFS+++S+ A  K +  ++S + S++ V+SG  D+ N  SR    D+FR+SLSSAVSSSS
Sbjct: 196 AFSDIVSYAAPPKPFFPSDSNAGSVHSVSSGQSDNTNLHSRGIPMDAFRVSLSSAVSSSS 255

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
            GS H+D D LGDVFIWGEG G G+LGG  + V  SS    D L+PK LE  V LD Q+I
Sbjct: 256 HGSGHDDGDALGDVFIWGEGTGEGILGGGNSRVGNSSGVNMDCLIPKPLEFAVKLDVQNI 315

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           +CG +HA LVTKQG+I+SWGE SGG+LGHGV+ DV  PKLIDAL   NI +VACGE+HTC
Sbjct: 316 SCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTC 375

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AVTLSGDLYTWG+G  N GLLG  +E+SHW+P++V+G +EG+ +S+I CGPWHTA +TSA
Sbjct: 376 AVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSA 435

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+LFTFGDG+FG LGHGDR S SVPREVE+LK L+TV A+CGVWHTAA+VEV    S S+
Sbjct: 436 GQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 495

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             SS K+FTWGDG +G+LGHGD + R+VP CV    + +FC++ACGH +T+ALT +G V+
Sbjct: 496 NCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVY 555

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           +MGS  YGQLG+P + G  P R+EG +   ++E+I+CG+YH+AV++S++EVYTWGKGANG
Sbjct: 556 TMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANG 615

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           +LGHGD +++ +PTLVEAL+DKQV++VVCG NFTAAIC+HK VS  D S+CSGCR  FN 
Sbjct: 616 RLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAICIHKWVSGVDQSMCSGCRLPFNL 675

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPR 721
           RR+RHNCYNC LV+C  CSSKKS+K +LAP  NKPYRVCD C+ KLN   E+   S   R
Sbjct: 676 RRKRHNCYNCALVFCHACSSKKSLKASLAPNPNKPYRVCDSCYSKLNKGPETDRYSSAKR 735

Query: 722 NSSGLFQNCKRVTEKE-------------NMNSRSATDGQSKPKGKSYH-----ASPSLN 763
            S  + Q      ++E             ++ S    D ++  K K +       SP  N
Sbjct: 736 GS--VIQGFNDSVDEELETKSNAQLSRLSSLESFKHMDSRTSKKNKKFEFNSSRVSPIPN 793

Query: 764 GKFQW---EPNSDFIKSNK-ISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSE 819
           G   W     +  F  S K  SAS PGSR VSRA SP+SR++SP  S T         S 
Sbjct: 794 GSSHWSGLNISKSFGSSKKFFSASVPGSRIVSRATSPVSRRASPPRSTTPTPTLGGLTSP 853

Query: 820 VIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNK 879
            + +  K  ND+ +QE   LR+Q+E+LTRKSQ LE +LERT+++LKE   IA EE  K K
Sbjct: 854 RVVDGVK-PNDSISQEVLSLRSQVENLTRKSQLLEADLERTTKQLKEAISIAGEETAKCK 912

Query: 880 AAQEVIRSLTAQAR 893
           AA+EVI+SLTAQ +
Sbjct: 913 AAKEVIKSLTAQLK 926


>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1105

 Score =  943 bits (2437), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 505/925 (54%), Positives = 665/925 (71%), Gaps = 48/925 (5%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           V RD EQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEEK LKLSHVSRI
Sbjct: 18  VTRDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLKLSHVSRI 77

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN---- 125
           I GQRT +FQRYP+PEKEYQSFSLIY  RSLDLICKDKDEAE+WF+ L+ALIS  +    
Sbjct: 78  ISGQRTPIFQRYPRPEKEYQSFSLIYDERSLDLICKDKDEAEVWFSGLKALISRCHQRKW 137

Query: 126 RCKSRSDSISSD--SPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           R +SRSD   S+  SPR++T+++SP H    S++   K+  +   +   YE+ P+N + K
Sbjct: 138 RTESRSDGTPSEANSPRTYTRRSSPLHSPFSSNESFQKEGSNHLRLHSPYESPPKNGVDK 197

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLD--DANSRSSTADSFRISLSSAVSSSS 241
           AFS++  +    K +    S + S++ ++SGG D    + +    D+FR+SLSSA+SSSS
Sbjct: 198 AFSDMSLYAVPPKGFFPPGSATMSVHSLSSGGSDTLHGHMKGMGMDAFRVSLSSAISSSS 257

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
            GS H+D D LGDVF+WGEG+G G+LGG  + V  S   + D+LLPK LEST+VLD Q+I
Sbjct: 258 HGSGHDDGDTLGDVFMWGEGIGEGVLGGGNHRVGSSLEIKMDSLLPKALESTIVLDVQNI 317

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           ACG +HAVLVTKQG+ FSWGE S G+LGHGV+++V +PKLIDALN +NI +VACGE+H+C
Sbjct: 318 ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSC 377

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AVTLSGDLYTWG G  + G+LG  +E+SHW+P++V+  MEG+ +SSI CGP+HTA +TSA
Sbjct: 378 AVTLSGDLYTWGKG--DFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSA 435

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+LFTFGDGTFG LGHGDR S  +PREV++LK L+TV A+CGVWHTAA+VEV   +S S+
Sbjct: 436 GQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 495

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             SS KLFTWGDG + +LGHGD EP++VP CV    + +FC+VACGHS+T+ALT +G V+
Sbjct: 496 NCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVY 555

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           +MGS  YGQLG+P + GK PTR++G +   ++E+IACG+YH+AV++S++EVYTWGKG+NG
Sbjct: 556 TMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 615

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           +LGHGD +++ +PTLVE+L+DKQVKS+ CGSNFTAA+CLHK  S  D S+CSGCR  FNF
Sbjct: 616 RLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVCLHKWASGMDQSMCSGCRQPFNF 675

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSES--GSNSQI 719
           +R+RHNCYNCGLV+C  CS+KKS+K  +AP  NKPYRVCD CF KL    E+   S+S +
Sbjct: 676 KRKRHNCYNCGLVFCHSCSNKKSLKACMAPNPNKPYRVCDRCFNKLKKAMETDPSSHSSL 735

Query: 720 PRNSSGLFQNCKRVTEKENMNSRS--------------ATDGQSK--------------- 750
            R  S + Q    +   E +++RS                D +SK               
Sbjct: 736 SRRES-VNQGSDAIDRDEKLDTRSDGQLARFSLLEPMRQVDSRSKKNKKYEFNSSRVSPI 794

Query: 751 PKGKSYHASPSLNGKFQWEPNSDFIKSNK-ISASPPGSRRVSRAP-SPISRKSSPACSIT 808
           P G S+  S ++   F    N  F  S K  SAS PGSR  SRA      R S P  +  
Sbjct: 795 PSGGSHRGSLNITKSF----NPTFGSSKKFFSASVPGSRIASRATSPISRRPSPPRSTTP 850

Query: 809 MNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETT 868
             + + L   +++ + +K++NDN +QE  +LR+Q+E+LTRK+Q  EVELERT+++LKE  
Sbjct: 851 TPTLSGLTTPKIVVDDTKRSNDNLSQEVVMLRSQVENLTRKAQLQEVELERTTKQLKEAL 910

Query: 869 QIAQEEAEKNKAAQEVIRSLTAQAR 893
            IA EE+ + KAA+EVI+SLTAQ +
Sbjct: 911 AIASEESARCKAAKEVIKSLTAQLK 935


>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
           distachyon]
          Length = 1090

 Score =  942 bits (2434), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 508/914 (55%), Positives = 655/914 (71%), Gaps = 31/914 (3%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           VERD EQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEEKQL+L+HVSRI
Sbjct: 17  VERDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESILIWFSGKEEKQLRLNHVSRI 76

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN---- 125
           IPGQRTA+FQRYP+PEKE QSFSLI  +RSLD+ICKDKDEAE+WF  L+ LIS  +    
Sbjct: 77  IPGQRTAIFQRYPRPEKECQSFSLISHDRSLDIICKDKDEAEVWFAGLKTLISRSHQRKW 136

Query: 126 RCKSRSDSISS--DSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           R +SRSD +SS   SPR++T+++SP      S+D  +KD  +   +   Y + P+  L K
Sbjct: 137 RTESRSDMLSSGTTSPRTYTRRSSPLSSPFSSNDSVHKDGAENYRLRSPYGSPPKVGLEK 196

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDAN--SRSSTADSFRISLSSAVSSSS 241
           AFS+++S+TA  + +  ++S   S++ V+SG  D+ N  SR    D+FR+SLSSAVSSSS
Sbjct: 197 AFSDIVSYTAPPRPFFPSDSNVGSVHSVSSGHSDNTNGHSRGLPMDNFRVSLSSAVSSSS 256

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
            GS H+D D LGDVF+WGEG G G+LGG  +    SS  + D LLPK LE    LD Q+I
Sbjct: 257 HGSGHDDGDALGDVFMWGEGTGEGILGGGNSRFGNSSGAKMDCLLPKPLEFAGRLDVQNI 316

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           +CG +HA LVTKQG+++SWGE SGG+LGHGV+ DV  PKL++AL   NI +VACGE+HTC
Sbjct: 317 SCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLVEALAHMNIELVACGEYHTC 376

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AVTLSGDLYTWG+G  N GLLG  +E+SHW+P++++G +EG+ +SSI CGPWHTA +TSA
Sbjct: 377 AVTLSGDLYTWGNGTFNFGLLGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTSA 436

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+LFTFGDG+FG LGHGDR S SVPREVE+LK L+TV A+CGVWHTAA+VEV    S ++
Sbjct: 437 GQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSTS 496

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             SS K+FTWGDG +G+LGHGD + R+VP CV    + +FC+VACGH  T+ALT +G V+
Sbjct: 497 NCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVASLVEPNFCQVACGHCFTVALTTSGHVY 556

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           +MGS+ YGQLG+P + G  P R+EG +   ++E+I+CG+YH+AV++S++EVYTWGKGANG
Sbjct: 557 TMGSSVYGQLGNPQADGMVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANG 616

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           +LGHGD +++ +PTLVEAL+DKQV+SVVCG NFTAAIC+HK VS  D S+CSGCR  FN 
Sbjct: 617 RLGHGDTDDRNSPTLVEALKDKQVRSVVCGINFTAAICIHKWVSGVDQSMCSGCRLPFNL 676

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGS------ 715
           RR+RHNCYNC LV+C  CSSKKS+K +LAP  NKPYRVCD+C+ KLN   E+        
Sbjct: 677 RRKRHNCYNCALVFCHSCSSKKSLKASLAPNPNKPYRVCDNCYCKLNKGPETDRYSSAKR 736

Query: 716 -----------NSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNG 764
                      N ++   S+        +   +NM+SR +   + K +  S   SP  NG
Sbjct: 737 GAVLQGFNDPINEELETRSNVQLSRLSSMESFKNMDSRYSKKNK-KFEFNSSRVSPIPNG 795

Query: 765 KFQW---EPNSDFIKSNK-ISASPPGSRRVSRAPSPI-SRKSSPACSITMNSFTDLANSE 819
              W     +  F  S K  SAS PGSR VSRA SP+  R S P  +    +   L +  
Sbjct: 796 SSHWSGLNISKSFGSSKKFFSASVPGSRIVSRATSPVSRRSSPPRSTTPTPTLGGLTSPR 855

Query: 820 VIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNK 879
           V+ + +K   D  NQE   LR+Q+E+LTRKS  LEVELERT+++LKE   IA EE  K K
Sbjct: 856 VVVDGAKPMKDGLNQEVINLRSQVENLTRKSHLLEVELERTTKQLKEAISIAGEETAKCK 915

Query: 880 AAQEVIRSLTAQAR 893
           AA+EVI+SLTAQ +
Sbjct: 916 AAKEVIKSLTAQLK 929


>gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa]
 gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa]
          Length = 1099

 Score =  938 bits (2424), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 503/936 (53%), Positives = 657/936 (70%), Gaps = 51/936 (5%)

Query: 1   MASFQQNILV---ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKE 57
           MA+ +  + V   ERD E A+  LK+GT LLKYGRRGKPKFCPFRLS+DE +LIW +GKE
Sbjct: 1   MAALEPTLRVGPLERDIELAITALKRGTQLLKYGRRGKPKFCPFRLSNDESVLIWISGKE 60

Query: 58  EKQLKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTAL 117
           EK LKLSHVSRIIPGQRT +FQRYP+PEKEYQSFSLIY +RSLDLICKDK+EAE+WFT L
Sbjct: 61  EKHLKLSHVSRIIPGQRTPIFQRYPRPEKEYQSFSLIYSDRSLDLICKDKEEAEVWFTGL 120

Query: 118 RALISEDNRCKSRSDSIS------SDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILV 171
           +ALIS     K R ++ +      ++SPR++T ++SP   +  S D + KD  D   +  
Sbjct: 121 KALISNRQIWKKREETTNDGLLSEANSPRAYTIRSSPLSFAFGSDDSSLKDGMDPLRLRT 180

Query: 172 AYENSPQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRS--STADSF 229
            Y++ P   L KA S+V+ +T   K     ES          GG D+   R+  +  D+F
Sbjct: 181 PYDSPPNTGLEKALSDVV-YTVPPKVLFPLESACAPAQSQLLGGSDETTGRAKVTNTDNF 239

Query: 230 RISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKV 289
           R+SLSSAVSSSSQGS  ++ D LGDV+IWGEG G+G+LGG V+ +   S  + D+ +PK 
Sbjct: 240 RVSLSSAVSSSSQGSGRDENDALGDVYIWGEGTGDGILGGGVHRIG-GSGVQMDSFVPKA 298

Query: 290 LESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN 349
           LES V+LD Q+IACG +HA LVTKQG++FSWGE  GG+LGHGV++DVS+PK +D L   N
Sbjct: 299 LESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFVDGLKNFN 358

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
           + +VACGE+H+CAVTLSGDLY WG   +N GLLG  SE + W+PRK+ G +EG+ +SS+ 
Sbjct: 359 VELVACGEYHSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLDGPLEGIHVSSVS 418

Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA 469
           CGPWHTA +TSAG+LFTFGDGTFG LGHGDR S S+PREVE+LK L+T+ A+CGVWHTAA
Sbjct: 419 CGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRISVSIPREVESLKGLRTMRAACGVWHTAA 478

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHS 529
           +VE+   +S S+  SS KLFTWGDG + +LGHGD E R+VP CV    + +FC+VACGHS
Sbjct: 479 VVEIMVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLVPTCVATLVEPNFCQVACGHS 538

Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
           +T ALT TGQV++MGS  YGQLG+P + G  PTR+EG +   ++E++ACG+YH+AV++S+
Sbjct: 539 LTAALTTTGQVYTMGSPVYGQLGNPQADGMLPTRVEGKLMKNFVEELACGAYHVAVLTSR 598

Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADH 649
           +EVYTWGKGANG+LGHGD +++ +P++VEAL+DKQVK +VCG++FTAAICLHK VS  D 
Sbjct: 599 TEVYTWGKGANGRLGHGDADDRNSPSVVEALKDKQVKGIVCGTSFTAAICLHKWVSGIDQ 658

Query: 650 SICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNT 709
           S+CSGC   FNF+R+RHNCYNCGLV+C  CS+KKS+K ++AP  NKPYRVCD+C  KL  
Sbjct: 659 SMCSGCHLPFNFKRKRHNCYNCGLVFCHSCSNKKSLKASMAPNPNKPYRVCDNCLSKLRR 718

Query: 710 TSESGS--NSQIPRNSSGLFQNCKRVTEK-ENMNSRS-------------------ATDG 747
           +SE+ S  +S + R  S + Q    V EK EN NS+S                   ++  
Sbjct: 719 SSETDSSVHSALSRRGS-VNQGLNEVAEKTENSNSKSHAKLGRNFSMESSKEVESISSRR 777

Query: 748 QSKPKGKSYHASPSLNG---KFQWEPNSDFIKSNK-ISASPPGSRRVSRAPSPISRKSS- 802
             K    S   SPS N    +  +  +  F  S K  SAS PGSR VSRA SP SR+SS 
Sbjct: 778 NRKSNSNSIQVSPSGNDVSRRNTFNNSKSFGSSKKFFSASLPGSRIVSRATSPTSRRSSP 837

Query: 803 -----PACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVEL 857
                P  +++ N    LA      + + + ND+  +E   LRAQ+E+LT K+Q  +VEL
Sbjct: 838 PRAATPTPTLSANELPKLA-----VDGAGRLNDSLREEIVKLRAQVEELTNKAQLQDVEL 892

Query: 858 ERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
           ERT+++LKE   +A+EE  K KAA+EVI+SLTAQ +
Sbjct: 893 ERTTKQLKEAIAVAEEETTKCKAAKEVIKSLTAQLK 928


>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1139

 Score =  936 bits (2419), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 502/927 (54%), Positives = 664/927 (71%), Gaps = 48/927 (5%)

Query: 8   ILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVS 67
           IL  ++   A+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEEK LKLSHVS
Sbjct: 50  ILENKNALHAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLKLSHVS 109

Query: 68  RIIPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN-- 125
           RII GQRT +FQRYP+PEKEYQSFSLIY  RSLDLICKDKDEAE+WF+ L+ALIS  +  
Sbjct: 110 RIISGQRTPIFQRYPRPEKEYQSFSLIYDERSLDLICKDKDEAEVWFSGLKALISRCHQR 169

Query: 126 --RCKSRSDSISSD--SPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRL 181
             R +SRSD   S+  SPR++T+++SP H    S++   K+  +   +   YE+ P+N +
Sbjct: 170 KWRTESRSDGTPSEANSPRTYTRRSSPLHSPFSSNESFQKEGSNHLRLHSPYESPPKNGV 229

Query: 182 GKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLD--DANSRSSTADSFRISLSSAVSS 239
            KAFS++  +    K +    S + S++ ++SGG D    + +    D+FR+SLSSA+SS
Sbjct: 230 DKAFSDMSLYAVPPKGFFPPGSATMSVHSLSSGGSDTLHGHMKGMGMDAFRVSLSSAISS 289

Query: 240 SSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQ 299
           SS GS H+D D LGDVF+WGEG+G G+LGG  + V  S   + D+LLPK LEST+VLD Q
Sbjct: 290 SSHGSGHDDGDTLGDVFMWGEGIGEGVLGGGNHRVGSSLEIKMDSLLPKALESTIVLDVQ 349

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           +IACG +HAVLVTKQG+ FSWGE S G+LGHGV+++V +PKLIDALN +NI +VACGE+H
Sbjct: 350 NIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYH 409

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           +CAVTLSGDLYTWG G  + G+LG  +E+SHW+P++V+  MEG+ +SSI CGP+HTA +T
Sbjct: 410 SCAVTLSGDLYTWGKG--DFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVT 467

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
           SAG+LFTFGDGTFG LGHGDR S  +PREV++LK L+TV A+CGVWHTAA+VEV   +S 
Sbjct: 468 SAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSS 527

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
           S+  SS KLFTWGDG + +LGHGD EP++VP CV    + +FC+VACGHS+T+ALT +G 
Sbjct: 528 SSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGH 587

Query: 540 VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
           V++MGS  YGQLG+P + GK PTR++G +   ++E+IACG+YH+AV++S++EVYTWGKG+
Sbjct: 588 VYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGS 647

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQF 659
           NG+LGHGD +++ +PTLVE+L+DKQVKS+ CGSNFTAA+CLHK  S  D S+CSGCR  F
Sbjct: 648 NGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVCLHKWASGMDQSMCSGCRQPF 707

Query: 660 NFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSES--GSNS 717
           NF+R+RHNCYNCGLV+C  CS+KKS+K  +AP  NKPYRVCD CF KL    E+   S+S
Sbjct: 708 NFKRKRHNCYNCGLVFCHSCSNKKSLKACMAPNPNKPYRVCDRCFNKLKKAMETDPSSHS 767

Query: 718 QIPRNSSGLFQNCKRVTEKENMNSRS--------------ATDGQSK------------- 750
            + R  S + Q    +   E +++RS                D +SK             
Sbjct: 768 SLSRRES-VNQGSDAIDRDEKLDTRSDGQLARFSLLEPMRQVDSRSKKNKKYEFNSSRVS 826

Query: 751 --PKGKSYHASPSLNGKFQWEPNSDFIKSNK-ISASPPGSRRVSRAP-SPISRKSSPACS 806
             P G S+  S ++   F    N  F  S K  SAS PGSR  SRA      R S P  +
Sbjct: 827 PIPSGGSHRGSLNITKSF----NPTFGSSKKFFSASVPGSRIASRATSPISRRPSPPRST 882

Query: 807 ITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKE 866
               + + L   +++ + +K++NDN +QE  +LR+Q+E+LTRK+Q  EVELERT+++LKE
Sbjct: 883 TPTPTLSGLTTPKIVVDDTKRSNDNLSQEVVMLRSQVENLTRKAQLQEVELERTTKQLKE 942

Query: 867 TTQIAQEEAEKNKAAQEVIRSLTAQAR 893
              IA EE+ + KAA+EVI+SLTAQ +
Sbjct: 943 ALAIASEESARCKAAKEVIKSLTAQLK 969


>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
          Length = 1385

 Score =  933 bits (2412), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 505/907 (55%), Positives = 651/907 (71%), Gaps = 34/907 (3%)

Query: 17  AVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPGQRTA 76
           A+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEEKQL+LSHVSRIIPGQRTA
Sbjct: 69  AITALKKGAYLLKYGRRGKPKFCPFRLSNDESILIWFSGKEEKQLRLSHVSRIIPGQRTA 128

Query: 77  VFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN----RCKSRSD 132
           +FQRYP+PEKE QSFSLI  +RSLD+ICKDKDEAE+WF  L+ LI+  +    R +SRSD
Sbjct: 129 IFQRYPRPEKECQSFSLISHDRSLDIICKDKDEAEVWFAGLKTLITRSHQRKWRTESRSD 188

Query: 133 SISS--DSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLS 190
            +SS   SPR++T+++SP      S+D  +KD G+   +   + + P+  L KAFS+++S
Sbjct: 189 MLSSGTTSPRTYTRRSSPLSSPFSSNDSVHKDGGENYRLRSPFGSPPKVGLEKAFSDIVS 248

Query: 191 FTAAAKAYTRAESVSKSLNFVASGGLDDAN--SRSSTADSFRISLSSAVSSSSQGSCHED 248
           + A  K +  ++S + S++ V+SG  D+ N  SR    D+FR+SLSSAVSSSS GS H+D
Sbjct: 249 YAAPPKPFFPSDSNAGSVHSVSSGQSDNTNLHSRGIPMDAFRVSLSSAVSSSSHGSGHDD 308

Query: 249 FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            D LGDVFIWGEG G G+LG   N    +S  + D L+PK LE  V LD Q+I+CG +HA
Sbjct: 309 GDALGDVFIWGEGTGEGILG-GGNSRVGNSGVKMDCLIPKPLEFAVKLDVQNISCGGRHA 367

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
            LVTKQG+I+SWGE SGG+LGHGV+ DV  PKLIDAL   NI +VACGE+HTCAVTLSGD
Sbjct: 368 TLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGD 427

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           LYTWG+G  N GLLG  +E+SHW+P++V+G +EG+ +S+I CGPWHTA +TSAG+LFTFG
Sbjct: 428 LYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFG 487

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           DG+FG LGHGDR S SVPREVE+LK L+TV A+CGVWHTAA+VEV    S S+  SS K+
Sbjct: 488 DGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKI 547

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           FTWGDG +G+LGHGD + R+VP CV    + +FC++ACGH +T+ALT +G V++MGS  Y
Sbjct: 548 FTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVY 607

Query: 549 GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           GQLG+P + G  P R+EG +   ++E+I+CG+YH+AV++S++EVYTWGKGANG+LGHGD 
Sbjct: 608 GQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 667

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNC 668
           +++ +PTLVE+L+DKQV++VVCG NFTAAIC+HK VS  D S+CSGCR  FN RR+RHNC
Sbjct: 668 DDRSSPTLVESLKDKQVRTVVCGINFTAAICIHKWVSGVDQSMCSGCRLPFNLRRKRHNC 727

Query: 669 YNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRNSSGLFQ 728
           YNC LV+C  CSSKKS+K +LAP  NKPYRVCD C+ KLN   E+   S   R S  + Q
Sbjct: 728 YNCALVFCHACSSKKSLKASLAPNPNKPYRVCDSCYSKLNKGPETDRYSSAKRGS--VIQ 785

Query: 729 NCKRVTEKE-------------NMNSRSATDGQSKPKGKSY-----HASPSLNGKFQW-- 768
                 ++E             ++ S    D ++  K K +       SP  NG   W  
Sbjct: 786 GFNDSVDEELETKSNAQLSRLSSLESFKHMDSRTSKKNKKFEFNSSRVSPIPNGSSHWSG 845

Query: 769 -EPNSDFIKSNK-ISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSK 826
              +  F  S K  SAS PGSR VSRA SP+SR++SP  S T         S  + +  K
Sbjct: 846 LNISKSFGSSKKFFSASVPGSRIVSRATSPVSRRASPPRSTTPTPTLGGLTSPRVVDGVK 905

Query: 827 QTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIR 886
             ND+ +QE   LR+Q+E+LTRKSQ LE +LERT+++LKE   IA EE  K KAA+EVI+
Sbjct: 906 -PNDSISQEVLSLRSQVENLTRKSQLLEADLERTTKQLKEAISIAGEETAKCKAAKEVIK 964

Query: 887 SLTAQAR 893
           SLTAQ +
Sbjct: 965 SLTAQLK 971


>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
          Length = 1132

 Score =  933 bits (2412), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 507/907 (55%), Positives = 651/907 (71%), Gaps = 33/907 (3%)

Query: 17  AVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPGQRTA 76
           A+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEEKQL+LSHVSRIIPGQRTA
Sbjct: 69  AITALKKGAYLLKYGRRGKPKFCPFRLSNDESILIWFSGKEEKQLRLSHVSRIIPGQRTA 128

Query: 77  VFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN----RCKSRSD 132
           +FQRYP+PEKE QSFSLI  +RSLD+ICKDKDEAE+WF  L+ LI+  +    R +SRSD
Sbjct: 129 IFQRYPRPEKECQSFSLISHDRSLDIICKDKDEAEVWFAGLKTLITRSHQRKWRTESRSD 188

Query: 133 SISS--DSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLS 190
            +SS   SPR++T+++SP      S+D  +KD  +   +   + + P+  L KAFS+++S
Sbjct: 189 MLSSGTTSPRTYTRRSSPLSSPFSSNDSVHKDGVENYRLRSPFGSPPKVGLEKAFSDIVS 248

Query: 191 FTAAAKAYTRAESVSKSLNFVASGGLDDAN--SRSSTADSFRISLSSAVSSSSQGSCHED 248
           + A  K +  ++S + S++ V+SG  D+ N  SR    D+FR+SLSSAVSSSS GS H+D
Sbjct: 249 YAAPPKPFFPSDSNAGSVHSVSSGQSDNTNLHSRGIPMDAFRVSLSSAVSSSSHGSGHDD 308

Query: 249 FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            D LGDVFIWGEG G G+LGG  + V  SS    D L+PK LE  V LD Q+I+CG +HA
Sbjct: 309 GDALGDVFIWGEGTGEGILGGGNSRVGNSSGVNMDCLIPKPLEFAVKLDVQNISCGGRHA 368

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
            LVTKQG+I+SWGE SGG+LGHGV+ DV  PKLIDAL   NI +VACGE+HTCAVTLSGD
Sbjct: 369 TLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTCAVTLSGD 428

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           LYTWG+G  N GLLG  +E+SHW+P++V+G +EG+ +S+I CGPWHTA +TSAG+LFTFG
Sbjct: 429 LYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSAGQLFTFG 488

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           DG+FG LGHGDR S SVPREVE+LK L+TV A+CGVWHTAA+VEV    S S+  SS K+
Sbjct: 489 DGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKI 548

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           FTWGDG +G+LGHGD + R+VP CV    + +FC++ACGH +T+ALT +G V++MGS  Y
Sbjct: 549 FTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVY 608

Query: 549 GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           GQLG+P + G  P R+EG +   ++E+I+CG+YH+AV++S++EVYTWGKGANG+LGHGD 
Sbjct: 609 GQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDT 668

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNC 668
           +++ +PTLVEAL+DKQV++VVCG NFTAAIC+HK VS  D S+CSGCR  FN RR+RHNC
Sbjct: 669 DDRSSPTLVEALKDKQVRTVVCGINFTAAICIHKWVSGVDQSMCSGCRLPFNLRRKRHNC 728

Query: 669 YNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRNSSGLFQ 728
           YNC LV+C  CSSKKS+K +LAP  NKPYRVCD C+ KLN   E+   S   R S  + Q
Sbjct: 729 YNCALVFCHACSSKKSLKASLAPNPNKPYRVCDSCYSKLNKGPETDRYSSAKRGS--VIQ 786

Query: 729 NCKRVTEKE-------------NMNSRSATDGQSKPKGKSYH-----ASPSLNGKFQW-- 768
                 ++E             ++ S    D ++  K K +       SP  NG   W  
Sbjct: 787 GFNDSVDEELETKSNAQLSRLSSLESFKHMDSRTSKKNKKFEFNSSRVSPIPNGSSHWSG 846

Query: 769 -EPNSDFIKSNK-ISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSK 826
              +  F  S K  SAS PGSR VSRA SP+SR++SP  S T         S  + +  K
Sbjct: 847 LNISKSFGSSKKFFSASVPGSRIVSRATSPVSRRASPPRSTTPTPTLGGLTSPRVVDGVK 906

Query: 827 QTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIR 886
             ND+ +QE   LR+Q+E+LTRKSQ LE +LERT+++LKE   IA EE  K KAA+EVI+
Sbjct: 907 -PNDSISQEVLSLRSQVENLTRKSQLLEADLERTTKQLKEAISIAGEETAKCKAAKEVIK 965

Query: 887 SLTAQAR 893
           SLTAQ +
Sbjct: 966 SLTAQLK 972


>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1075

 Score =  933 bits (2411), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 510/923 (55%), Positives = 659/923 (71%), Gaps = 47/923 (5%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           VERD EQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++G EEK LKLSHVSRI
Sbjct: 17  VERDIEQAIIALKKGAYLLKYGRRGKPKFCPFRLSNDETVLIWFSGNEEKHLKLSHVSRI 76

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISE----DN 125
           I GQRT +FQRYP+PEKEYQSFSLIY  RSLD+ICKDKDEAE+WFT L+ALIS     + 
Sbjct: 77  ISGQRTPIFQRYPRPEKEYQSFSLIYSERSLDVICKDKDEAEVWFTGLKALISHCHQRNR 136

Query: 126 RCKSRSDSISSD--SPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           R +SRSD   S+  SPR++T+++SP H    S+D   KD  +   I   +E+ P+N L K
Sbjct: 137 RTESRSDGTPSEANSPRTYTRRSSPLHSPFSSNDSLQKDGSNHLRIHSPFESPPKNGLDK 196

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANS--RSSTADSFRISLSSAVSSSS 241
           AFS++  +    K +  ++S + S   V SGG D  +   R    D+FR+S+SSAVSSSS
Sbjct: 197 AFSDMALYAVPPKGFYPSDSATIS---VHSGGSDSMHGHMRGMGIDAFRVSMSSAVSSSS 253

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
            GS H+D D LGDVFIWGEG+G G+LGG    V  S   + D+LLPK LEST+VLD Q+I
Sbjct: 254 HGSGHDDGDALGDVFIWGEGIGEGVLGGGNRRVGSSFDMKMDSLLPKALESTIVLDVQNI 313

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           ACG +HAVLVTKQG+ FSWGE S G+LGHGV++++  PKLIDALN +NI +VACGEFH+C
Sbjct: 314 ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSC 373

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AVTLSGDLYTWG G  + G+LG  +E+SHW+P++V+  +EG+ +SSI CGP+HTA +TSA
Sbjct: 374 AVTLSGDLYTWGKG--DFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSA 431

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+LFTFGDGTFG LGHGD+ S  +PREV++LK L+TV A+CGVWHTAA+VEV   +S S+
Sbjct: 432 GQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 491

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             SS KLFTWGDG +G+LGHG+ EP++VP CV    + +FC+VACGHS+T+ALT +G V+
Sbjct: 492 NCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVY 551

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           +MGS  YGQLG+  + GK P R+EG +   ++E+IACG+YH+AV++S++EVYTWGKG+NG
Sbjct: 552 TMGSPVYGQLGNSHADGKLPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 611

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           +LGHGD +++ +PTLVE+L+DKQVKS+ CG+NFTAA+C+H+  S  D S+CSGCR  F+F
Sbjct: 612 RLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVCIHRWASGMDQSMCSGCRQPFSF 671

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSES--GSNSQI 719
           +R+RHNCYNCGLV+C  C+SKKS+K  +AP  NKPYRVCD CF KL  T E+   S+S +
Sbjct: 672 KRKRHNCYNCGLVFCHSCTSKKSLKACMAPNPNKPYRVCDKCFNKLKKTMETDPSSHSSL 731

Query: 720 PRNSSGLFQNCKRVTEKENMNSRSATDGQ---------------SKPKGKSYH-----AS 759
            R  S + Q    + + +  +SRS  DGQ                  K K Y       S
Sbjct: 732 SRRGS-INQGSDPIDKDDKFDSRS--DGQLARFSLMESMRQVDSRYKKNKKYEFNSSRVS 788

Query: 760 PSLNGKFQWEP-------NSDFIKSNK-ISASPPGSRRVSRAP-SPISRKSSPACSITMN 810
           P  +G  Q          N  F  S K  SAS PGSR VSRA      R S P  +    
Sbjct: 789 PIPSGSSQRGALNIAKSFNPVFGASKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTP 848

Query: 811 SFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQI 870
           + + LA  + + + +K+TNDN +QE   LR+Q+E LTRK+Q  EVELERT+++LKE   I
Sbjct: 849 TLSGLATPKFVVDDTKRTNDNLSQEVVKLRSQVESLTRKAQLQEVELERTAKQLKEALAI 908

Query: 871 AQEEAEKNKAAQEVIRSLTAQAR 893
           A EE  + KAA+EVI+SLTAQ +
Sbjct: 909 ANEETTRCKAAKEVIKSLTAQLK 931


>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1092

 Score =  932 bits (2410), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 512/916 (55%), Positives = 655/916 (71%), Gaps = 35/916 (3%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           VERD EQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEEKQL+LSHVSRI
Sbjct: 17  VERDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESILIWFSGKEEKQLRLSHVSRI 76

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN---- 125
           IPGQRTA+FQRYP+PEKE QSFSLI  +RSLD+ICKDKDEAE+WF  L+ LIS  +    
Sbjct: 77  IPGQRTAIFQRYPRPEKECQSFSLISHDRSLDIICKDKDEAEVWFAGLKTLISRSHQRKW 136

Query: 126 RCKSRSDSISS--DSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           R +SRSD +SS   SPR++T+++SP      S+D  +KD  +   +   Y + P+  L K
Sbjct: 137 RTESRSDMLSSGTTSPRTYTRRSSPLSSPFSSNDSVHKDGSENYRLRSPYGSPPKAGLDK 196

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDD--ANSRSSTADSFRISLSSAVSSSS 241
           AFS+++S+ A  + +  ++S   S++ V+SG  D+   NSR    D+FR+SLSSAVSSSS
Sbjct: 197 AFSDIVSYAAPPRPFFPSDSNVGSVHSVSSGHSDNTNGNSRGIPMDAFRVSLSSAVSSSS 256

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
            GS H+D D LGDVFIWGEG G G+LGG  + +  SS  + D L+PK LE    LD Q+I
Sbjct: 257 HGSGHDDGDALGDVFIWGEGTGEGILGGGNSRLGSSSGAKMDCLVPKPLEFAGRLDVQNI 316

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           +CG +HA LVTKQG+++SWGE SGG+LGHGV+ DV  PKLIDAL   NI +VACGE+HTC
Sbjct: 317 SCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLIDALAHMNIELVACGEYHTC 376

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AVTLSGDLYTWG+G  N GL G  +E+SHW+P++++G +EG+ +SSI CGPWHTA +TSA
Sbjct: 377 AVTLSGDLYTWGNGTFNFGLSGHGNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTSA 436

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+LFTFGDG+FG LGHGDR S SVPREVE+LK L+TV A+CGVWHTAA+VEV    S S+
Sbjct: 437 GQLFTFGDGSFGVLGHGDRQSISVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 496

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             SS K+FTWGDG +G+LGHGD E R+VP CV    + +FC+VACGH  T+ALT +G V+
Sbjct: 497 NCSSGKIFTWGDGDKGRLGHGDKETRLVPTCVASLVEPNFCQVACGHCFTVALTTSGHVY 556

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           +MGS+ YGQLG+P + G  P R+EG +   ++E+I+CG+YH+AV++S++EVYTWGKGANG
Sbjct: 557 TMGSSVYGQLGNPQADGMVPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANG 616

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           +LGHGD +++ +PTLVEAL+DKQV+SVVCG NFTAAIC+HK VS  D S+CSGCR  FN 
Sbjct: 617 RLGHGDTDDRNSPTLVEALKDKQVRSVVCGINFTAAICIHKWVSGVDQSMCSGCRLPFNL 676

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPR 721
           RR+RHNCYNC LV+C  CSSKKS+K +LAP  NKPYRVCD C+ KLN   E+   S   R
Sbjct: 677 RRKRHNCYNCALVFCHSCSSKKSLKASLAPNPNKPYRVCDSCYGKLNKGPETDRYSSAKR 736

Query: 722 NSSGLFQ----------------NCKRVTEKE---NMNSRSATDGQSKPKGKSYHASPSL 762
            +  + Q                   R++  E   NM+SR +   + K +  S   SP  
Sbjct: 737 GA--ILQGFNDSINDDLETRSNVQLSRLSSMESFKNMDSRYSKKNK-KFEFNSSRVSPIP 793

Query: 763 NGKFQW---EPNSDFIKSNK-ISASPPGSRRVSRAPSPI-SRKSSPACSITMNSFTDLAN 817
           NG   W     +  F  S K  SAS PGSR  SRA SP+  R S P  +    +   L +
Sbjct: 794 NGSSHWSGLNISKSFGSSKKFFSASVPGSRIASRATSPVSRRTSPPRSTTPTPTLGGLTS 853

Query: 818 SEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEK 877
             V+ + ++   DN +QE   LR+Q+E+LTRKS  LEVELERT+++LKE   IA EE  K
Sbjct: 854 PRVVVDGARPIKDNLSQEVVHLRSQVENLTRKSHLLEVELERTTKQLKEAISIAGEETAK 913

Query: 878 NKAAQEVIRSLTAQAR 893
            KAA+EVI+SLTAQ +
Sbjct: 914 CKAAKEVIKSLTAQLK 929


>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
           distachyon]
          Length = 1092

 Score =  932 bits (2409), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 507/933 (54%), Positives = 659/933 (70%), Gaps = 52/933 (5%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           VERD EQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEEK L+LSHVSRI
Sbjct: 19  VERDLEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLRLSHVSRI 78

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN---- 125
           +PGQRTA+FQRYP+PEKE QSFSLI ++RSLD+ICKDKDEAE+WF  L+ LIS  +    
Sbjct: 79  MPGQRTAIFQRYPRPEKECQSFSLISQDRSLDIICKDKDEAEVWFAGLKTLISRSHQRKW 138

Query: 126 RCKSRSDSISS--DSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           R +SRSD+ISS   SPR +T+++SP      S+D  +KD  +       Y +  +N L K
Sbjct: 139 RTESRSDTISSAATSPRIYTRRSSPLSSPFSSNDSLHKDGNENYRFRSPYGSPQKNGLDK 198

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANS--RSSTADSFRISLSSAVSSSS 241
           AFS+V+ +    K++  ++S ++S++ ++SG  D+ N   R    D FR S SSAVSSSS
Sbjct: 199 AFSDVVLYAVPPKSFFPSDSNARSVHSMSSGHSDNTNGHPRGIQMDPFRASYSSAVSSSS 258

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
            GS ++D D LGDV IWGEG G G+LGG  + +  SS  + D L+PK LE  V LD Q+I
Sbjct: 259 YGSGYDDGDALGDVLIWGEGTGEGILGGGSSRIGSSSGAKMDCLVPKPLEFAVRLDVQNI 318

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           +CG KHA LV+KQG+I+SWGE SGG+LGHGV+ DV++PKLIDAL   NI +VACGE+HTC
Sbjct: 319 SCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKLIDALTHMNIELVACGEYHTC 378

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AVTLSGDLYTWGDG    GLLG  ++ISHW+P+K+ G +EG+ +SSI CGP+HT  +TSA
Sbjct: 379 AVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHGPLEGIHVSSISCGPFHTVIVTSA 438

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+LFTFGDG+FG LGHGDR S SVP+EVE+LK L+TV A+CGVWHTAA+VEV    S S+
Sbjct: 439 GQLFTFGDGSFGVLGHGDRESLSVPKEVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSS 498

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             SS K+FTWGDG +G+LGHGD E R+VP CV    + +FC+VACGH +T+ALT +G V+
Sbjct: 499 NCSSGKIFTWGDGDKGRLGHGDKESRLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVY 558

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           +MGSA YGQLG+P + G  P R+EG +   ++E+I+CG+YH+AV++S++EVYTWGKGANG
Sbjct: 559 TMGSAVYGQLGNPQADGMLPARVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANG 618

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           +LGHG+ ++K TPTLVEAL+DKQV++VVCG+NFTAAIC+HK +S  D S+CSGCR  FN 
Sbjct: 619 RLGHGNTDDKNTPTLVEALKDKQVRNVVCGTNFTAAICIHKWISGVDQSMCSGCRQPFNL 678

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKL-------------- 707
           RR+RHNCYNC L++C  CSSKKS+K +LAP  +KPYRVCD C+ KL              
Sbjct: 679 RRKRHNCYNCALIFCHSCSSKKSLKASLAPNPSKPYRVCDSCYSKLTKGLETDMYSSAKR 738

Query: 708 -----------NTTSESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSY 756
                      +  +E+ SN+Q+ R SS        +   ++M+SR +   + K +  S 
Sbjct: 739 GAVVQGFSDTVDEDTETRSNAQLSRMSS--------IDSFKHMDSRYSKKNK-KFEFNST 789

Query: 757 HASPSLNGKFQWEP-------NSDFIKSNK-ISASPPGSRRVSRAPSPI-SRKSSPACSI 807
             SP  NG   W         N  F  S K  SAS PGSR +SRA SP+  R S    + 
Sbjct: 790 RVSPVPNGGSHWSGLNISRSFNPVFGSSKKFFSASVPGSRIISRATSPVSRRPSPTRSTT 849

Query: 808 TMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKET 867
              +F  L +  V+   +K TND+  QE   LR+Q+++LTRK Q LE ELERT+++LKE 
Sbjct: 850 PTPTFGGLTSPRVVVNGAKPTNDSQTQEILNLRSQVDNLTRKYQLLEAELERTTKQLKEA 909

Query: 868 TQIAQEEAEKNKAAQEVIRSLTAQARPGSALGI 900
             IA EE  K KAA+EVI++LTAQ + G A G+
Sbjct: 910 IAIAGEETAKCKAAKEVIKTLTAQLK-GMAEGL 941


>gi|142942429|gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
           tuberosum]
          Length = 951

 Score =  931 bits (2406), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 504/959 (52%), Positives = 657/959 (68%), Gaps = 81/959 (8%)

Query: 1   MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSS--------------- 45
           MA FQ++ L +RD +QA+  LKKG  LLKYGRRGKPKFCPFRLS+               
Sbjct: 1   MADFQRSSLADRDIDQAIAALKKGANLLKYGRRGKPKFCPFRLSNYAVAEDRKNALKSLF 60

Query: 46  -------DEKLLIWYAGKEEKQLKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRNR 98
                  DE  ++WY  KEEKQL+L HVSRIIPGQRTA+FQ+YP+PEKEYQSFSLI  +R
Sbjct: 61  SQNLDIKDESAVVWYHDKEEKQLELCHVSRIIPGQRTAIFQQYPRPEKEYQSFSLICNDR 120

Query: 99  SLDLICKDKDEAELWFTALRALI----SEDNRCKSRSDSISSDSPRSHTQKNSPSHVSSI 154
           SLDLICKDKDEAE+W T L+A+I    S   +  +RS+++ SDSP          H   +
Sbjct: 121 SLDLICKDKDEAEVWITGLKAIITRGRSRKGKYDARSETVFSDSP----------HGQRV 170

Query: 155 SSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASG 214
           ++  ++ D GD Q      E+ PQ+RLGKA+++++ +TAA K+ T  E+ S +L+ +++G
Sbjct: 171 TTSTSSIDQGDNQRT----ESLPQSRLGKAYADIIQYTAAGKSPTLVETGSFNLSSLSAG 226

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGV 274
            +D++N+RSSTAD+FR+SLSSA+SSSSQGSC EDFD LGDVFIWGEG GNGLLGG  + +
Sbjct: 227 AVDNSNARSSTADTFRVSLSSALSSSSQGSCLEDFDNLGDVFIWGEGTGNGLLGGGKHRI 286

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
             SS  R DA  PK LES+VVLD Q+I+CG++HA+LVTKQG+ FSWGE +GG+LGHG E 
Sbjct: 287 GKSSGTRIDANTPKSLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAET 346

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
           DVS+PKLI    G N+ ++ACGE+H+CAVT SGDLYTWGDG  + GLLG  SE SHWIP+
Sbjct: 347 DVSHPKLIKNFKGMNVELIACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPK 406

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           KV G MEGL++S + CGPWHTA ITSAG+LFTFGDGTFGALGHGDRS    PREVET   
Sbjct: 407 KVCGLMEGLRVSHVSCGPWHTALITSAGRLFTFGDGTFGALGHGDRSGCITPREVETFNG 466

Query: 455 LKTVMASCGVWHTAAIVEV-AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
           LKT+  +CGVWHTAA+VE+ +G  S  +   S  LFTWGDG +G+LGHGD +PR+ P C+
Sbjct: 467 LKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCI 526

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
               D SF +VAC +++T+ALT TG+V++MGS  YGQLG P + G  P  +E  +    +
Sbjct: 527 TALVDKSFSEVACSYAMTVALTTTGRVYTMGSNVYGQLGCPLANGMSPICVEDYLVDSTV 586

Query: 574 EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSN 633
           E+I+CGS+H+AV++S++EVYTWGKG NGQLGHGD ENK TPTLV+ LRDKQVK +VCGSN
Sbjct: 587 EEISCGSHHVAVLTSRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDKQVKRIVCGSN 646

Query: 634 FTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEI 693
           F+AAIC+H     AD+SIC GCR  FNFRR+RHNCYNCG V+CK CSSKKS+K +LAP  
Sbjct: 647 FSAAICVHNWALSADNSICFGCRIPFNFRRKRHNCYNCGFVFCKACSSKKSLKASLAPST 706

Query: 694 NKPYRVCDDCFIKLNTTSESGSNSQIPRNSSG--LFQNCKRVTEKE--------NMNSRS 743
           +KPYRVCDDC+ KL    ES   S++P+  +G  L++  ++ T+KE        + +  S
Sbjct: 707 SKPYRVCDDCYDKLQKAIESEPFSRVPKVKAGNALYKASEQ-TDKESGFPLLVGHTSRLS 765

Query: 744 ATDGQSKPKGKSYHASPSLN--GKFQWE------------PNSDF-IKSNKISASPPGSR 788
           ++D  ++ +G+        N    FQ E            P S F +  +  SAS P +R
Sbjct: 766 SSDSFNRAQGRISRVDQYENRASSFQNENPPRESFSLSKSPISAFRVSKSLFSASLPSTR 825

Query: 789 RVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQ------ 842
            V ++ SP+  K+S   S     +  +  +EV+ +  K  ND+ +QE   L+AQ      
Sbjct: 826 VVPQSTSPLLGKASALWSAIPAPYPPVRTAEVVVDNLKPINDSLSQEVKQLKAQLEAMLL 885

Query: 843 --------LEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
                   LE+L  KSQ LE EL R +++L + T  A  EAEK +AA+ VI+SLTAQ R
Sbjct: 886 GLFKNANGLEELASKSQLLEAELGRKTKQLMDATAKAAVEAEKRRAAKHVIKSLTAQVR 944


>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
 gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
          Length = 1075

 Score =  931 bits (2405), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 509/923 (55%), Positives = 658/923 (71%), Gaps = 47/923 (5%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           VERD EQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++G EEK LKLSHVSRI
Sbjct: 17  VERDIEQAIIALKKGAYLLKYGRRGKPKFCPFRLSNDETVLIWFSGNEEKHLKLSHVSRI 76

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISE----DN 125
           I GQRT +FQRYP+PEKEYQSFSLIY  RSLD+ICKDKDEAE+WFT L+ALIS     + 
Sbjct: 77  ISGQRTPIFQRYPRPEKEYQSFSLIYSERSLDVICKDKDEAEVWFTGLKALISHCHQRNR 136

Query: 126 RCKSRSDSISSD--SPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           R +SRSD   S+  SPR++T+++SP H    S+D   KD  +   I   +E+ P+N L K
Sbjct: 137 RTESRSDGTPSEANSPRTYTRRSSPLHSPFSSNDSLQKDGSNHLRIHSPFESPPKNGLDK 196

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANS--RSSTADSFRISLSSAVSSSS 241
           AFS++  +    K +  ++S + S   V SGG D  +   R    D+FR+S+SSAVSSSS
Sbjct: 197 AFSDMALYAVPPKGFYPSDSATIS---VHSGGSDSMHGHMRGMGMDAFRVSMSSAVSSSS 253

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
            GS H+D D LGDVFIWGEG+G G+LGG    V  S   + D+LLPK LEST+VLD Q+I
Sbjct: 254 HGSGHDDGDALGDVFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDVQNI 313

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           ACG +HAVLVTKQG+ FSWGE S G+LGHGV++++  PKLIDALN +NI +VACGEFH+C
Sbjct: 314 ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSC 373

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AVTLSGDLYTWG G  + G+LG  +E+SHW+P++V+  +EG+ +SSI CGP+HTA +TSA
Sbjct: 374 AVTLSGDLYTWGKG--DFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSA 431

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+LFTFGDGTFG LGHGD+ S  +PREV++LK L+TV A+CGVWHTAA+VEV   +S S+
Sbjct: 432 GQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 491

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             SS KLFTWGDG +G+LGHG+ EP++VP CV    + +FC+VACGHS+T+ALT +G V+
Sbjct: 492 NCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVY 551

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           +MGS  YGQLG+  + GK P R+EG +   ++E+IACG+YH+AV++S++EVYTWGKG+NG
Sbjct: 552 TMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 611

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           +LGHGD +++ +PTLVE+L+DKQVKS+ CG+NFTAA+C+H+  S  D S+CSGCR  F+F
Sbjct: 612 RLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVCIHRWASGMDQSMCSGCRQPFSF 671

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSES--GSNSQI 719
           +R+RHNCYNCGLV+C  C+SKKS+K  +AP  NKPYRVCD CF KL  T E+   S+S +
Sbjct: 672 KRKRHNCYNCGLVFCHSCTSKKSLKACMAPNPNKPYRVCDKCFNKLKKTMETDPSSHSSL 731

Query: 720 PRNSSGLFQNCKRVTEKENMNSRSATDGQ---------------SKPKGKSY-----HAS 759
            R  S + Q    + + +  +SRS  DGQ                  K K Y       S
Sbjct: 732 SRRGS-INQGSDPIDKDDKFDSRS--DGQLARFSLMESMRQVDSRHKKNKKYEFNSSRVS 788

Query: 760 PSLNGKFQWEP-------NSDFIKSNK-ISASPPGSRRVSRAP-SPISRKSSPACSITMN 810
           P  +G  Q          N  F  S K  SAS PGSR VSRA      R S P  +    
Sbjct: 789 PIPSGSSQRGALNIAKSFNPVFGASKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTP 848

Query: 811 SFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQI 870
           + + LA  + + + +K+TNDN +QE   LR+Q+E LTRK+Q  EVELERT+++LKE   I
Sbjct: 849 TLSGLATPKFVVDDTKRTNDNLSQEVVKLRSQVESLTRKAQLQEVELERTTKQLKEALAI 908

Query: 871 AQEEAEKNKAAQEVIRSLTAQAR 893
             EE  + KAA+EVI+SLTAQ +
Sbjct: 909 TNEETTRCKAAKEVIKSLTAQLK 931


>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1131

 Score =  929 bits (2400), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 515/956 (53%), Positives = 651/956 (68%), Gaps = 72/956 (7%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           VERD EQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEEK L+LSH+S+I
Sbjct: 16  VERDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLRLSHISKI 75

Query: 70  IPGQRT---------------------------------------AVFQRYPQPEKEYQS 90
           IPGQRT                                       ++FQRYP+PEKE QS
Sbjct: 76  IPGQRTLNSIVNEQKLYVSLEVFPFSIRDEIGCLTLLTRPFFIIQSIFQRYPRPEKECQS 135

Query: 91  FSLIYRNRSLDLICKDKDEAELWFTALRALISEDN----RCKSRSDSISS--DSPRSHTQ 144
           FSLI  +RSLD+ICKDKDEAE+WF  L+ LIS  +    R +SRSD +SS   SPR++T+
Sbjct: 136 FSLISHDRSLDVICKDKDEAEVWFAGLKTLISRCHQRKWRTESRSDLLSSGATSPRTYTR 195

Query: 145 KNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLSFTAAAKAYTRAESV 204
           ++SP      S+D  +KD  D   +   Y + P+N L KAFS+V+ +    + +  ++S 
Sbjct: 196 RSSPLSSPFSSNDSIHKDGSDNYRLRTPYGSPPKNGLEKAFSDVMLYAVPPRGFFPSDSN 255

Query: 205 SKSLNFVASGGLDDANS--RSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGL 262
           + S++ ++SG  D+ N   R    D+FR S SSAVSSSS GS H+D D LGDVFIWGEG 
Sbjct: 256 AGSVHSMSSGHSDNTNGHPRGVPMDAFRASYSSAVSSSSHGSGHDDGDALGDVFIWGEGT 315

Query: 263 GNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGE 322
           G G+LGG  + V  SS  + D L+PK LE  V LD Q+I+CG +HA LVTKQG+I+SWGE
Sbjct: 316 GEGILGGGGSRVGSSSGAKMDCLVPKPLEFAVRLDVQNISCGGRHAALVTKQGEIYSWGE 375

Query: 323 GSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLL 382
            SGG+LGHGV+ DVS PKLIDAL+  NI +VACGE+HTCAVTLSGDLYTWGDG    GLL
Sbjct: 376 ESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLL 435

Query: 383 GQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSS 442
           G  ++ISHW+P+ V+G +EG+ +SSI CGPWHTA +TSAG+LFTFGDG+FG LGHGDR S
Sbjct: 436 GHGNDISHWVPKHVNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRES 495

Query: 443 TSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG 502
            SVPREVE+LK L+TV A+CGVWHTAA+VEV    S S+  SS K+FTWGDG +G+LGHG
Sbjct: 496 ISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHG 555

Query: 503 DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT 562
           D  P++VP CV    + +FC+VACGH +T+ALT +G V++MGSA YGQLG+  + G  P 
Sbjct: 556 DKGPKLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADGMLPV 615

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRD 622
           R+EG +   ++E+I+CG+YH+AV++SK+EVYTWGKGANG+LGHGD ++K TPTLVEAL+D
Sbjct: 616 RVEGKLHKNFVEEISCGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKD 675

Query: 623 KQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSK 682
           KQV+ VVCG NFTAAIC+HK VS  D S+CSGCR  FN RR+RHNCYNC LV+C  CSSK
Sbjct: 676 KQVRIVVCGINFTAAICIHKWVSGVDQSMCSGCRQPFNLRRKRHNCYNCALVFCHSCSSK 735

Query: 683 KSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPR----------NSSGL-FQNCK 731
           KS+K +LAP  NKPYRVCD C+ KL    E+  +S   R          N   L  ++  
Sbjct: 736 KSLKASLAPNTNKPYRVCDTCYSKLTKGLETDMHSSAKRAATVPGVSDANEEDLETRSNA 795

Query: 732 RVTEKENMNSRSATDGQSKPKGKSY-----HASPSLNGKFQWEP-------NSDFIKSNK 779
           +++   +M S    D +   K K +       SP  NG   W         N  F  S K
Sbjct: 796 QLSRLSSMESFKHLDSRYSKKNKKFEFNSTRVSPVPNGSSHWSGLNISRSFNPVFGSSKK 855

Query: 780 -ISASPPGSRRVSRAPSPISRKS-SPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPD 837
             SAS PGSR VSRA SPISR++  P  +    +   L +  V+    K TND  +QE  
Sbjct: 856 FFSASVPGSRIVSRATSPISRRASPPRSTTPTPTLGGLTSPRVVPNDGKPTNDALSQEVL 915

Query: 838 VLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
            LR+Q+E L RKSQ LEVELERT+++LKE   IA EE  K KAA+EVI+SLTAQ +
Sbjct: 916 NLRSQVESLARKSQLLEVELERTTKQLKEAISIAGEETAKCKAAKEVIKSLTAQLK 971


>gi|113205375|gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
          Length = 1127

 Score =  924 bits (2388), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 502/975 (51%), Positives = 656/975 (67%), Gaps = 97/975 (9%)

Query: 1   MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSS--------------- 45
           MA FQ++ L +RD +QA+  LKKG  LLKYGRRGKPKFCPFRLS+               
Sbjct: 1   MADFQRSSLADRDIDQAIAALKKGANLLKYGRRGKPKFCPFRLSNYAVAEDRKNALKSLF 60

Query: 46  -------DEKLLIWYAGKEEKQLKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRNR 98
                  DE  ++WY  KEEKQL+L HVSRIIPGQRTA+FQ+YP+PEKEYQSFSLI  +R
Sbjct: 61  SQNLDIKDESAVVWYHDKEEKQLELCHVSRIIPGQRTAIFQQYPRPEKEYQSFSLICNDR 120

Query: 99  SLDLICKDKDEAELWFTALRALI----SEDNRCKSRSDSISSDSPRSHTQKNSPSHVSSI 154
           SLDLICKDKDEAE+W T L+A+I    S   +  +RS+++ SDSP          H   +
Sbjct: 121 SLDLICKDKDEAEVWITGLKAIITRGRSRKGKYDARSETVFSDSP----------HGQRV 170

Query: 155 SSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASG 214
           ++  ++ D GD Q      E+ PQ+RLGKA+++++ +TAA K+ T  E+ S +L+ +++G
Sbjct: 171 TTSTSSIDQGDNQRT----ESLPQSRLGKAYADIIQYTAAGKSPTLVETGSFNLSSLSAG 226

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGV 274
            +D++N+RSSTAD+FR+SLSSA+SSSSQGSC EDFD LGDVFIWGEG GNGLLGG  + +
Sbjct: 227 AVDNSNARSSTADTFRVSLSSALSSSSQGSCLEDFDNLGDVFIWGEGTGNGLLGGGKHRI 286

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
             SS  R DA  PK LES+VVLD Q+I+CG++HA+LVTKQG+ FSWGE +GG+LGHG E 
Sbjct: 287 GKSSGTRIDANTPKSLESSVVLDVQNISCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAET 346

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
           DVS+PKLI    G N+ ++ACGE+H+CAVT SGDLYTWGDG  + GLLG  SE SHWIP+
Sbjct: 347 DVSHPKLIKNFKGMNVELIACGEYHSCAVTSSGDLYTWGDGAKSSGLLGHRSEASHWIPK 406

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           KV G MEGL++S + CGPWHTA ITSAG+LFTFGDGTFGALGHGDRS    PREVET   
Sbjct: 407 KVCGLMEGLRVSHVSCGPWHTALITSAGRLFTFGDGTFGALGHGDRSGCITPREVETFNG 466

Query: 455 LKTVMASCGVWHTAAIVEV-AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
           LKT+  +CGVWHTAA+VE+ +G  S  +   S  LFTWGDG +G+LGHGD +PR+ P C+
Sbjct: 467 LKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCI 526

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
               D SF +VAC +++T+ALT TG+V++MGS  YGQLG P + G  P  +E  +    +
Sbjct: 527 TALVDKSFSEVACSYAMTVALTTTGRVYTMGSNVYGQLGCPLANGMSPICVEDYLVDSTV 586

Query: 574 EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSN 633
           E+I+CGS+H+AV++S++EVYTWGKG NGQLGHGD ENK TPTLV+ LRDKQVK +VCGSN
Sbjct: 587 EEISCGSHHVAVLTSRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDKQVKRIVCGSN 646

Query: 634 FTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEI 693
           F+AAIC+H     AD+SIC GCR  FNFRR+RHNCYNCG V+CK CSSKKS+K +LAP  
Sbjct: 647 FSAAICVHNWALSADNSICFGCRIPFNFRRKRHNCYNCGFVFCKACSSKKSLKASLAPST 706

Query: 694 NKPYRVCDDCFIKLNTTSESGSNSQIPRNSSG--LFQNCKRVTEKE--------NMNSRS 743
           +KPYRVCDDC+ KL    ES   S++P+  +G  L++  ++ T+KE        + +  S
Sbjct: 707 SKPYRVCDDCYDKLQKAIESEPFSRVPKVKAGNALYKASEQ-TDKESGFPLLVGHTSRLS 765

Query: 744 ATDGQSKPKGKSYHASPSLN--GKFQWE--PNSDF-----------IKSNKISASPPGSR 788
           ++D  ++ +G+        N    FQ E  P   F           +  +  SAS P +R
Sbjct: 766 SSDSFNRAQGRISRVDQYENRASSFQNENPPRESFSLSKSPISAFRVSKSLFSASLPSTR 825

Query: 789 RVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQ------ 842
            V ++ SP+  K+S   S     +  +  +EV+ +  K  ND+ +QE   L+AQ      
Sbjct: 826 VVPQSTSPLLGKASALWSAIPAPYPPVRTAEVVVDNLKPINDSLSQEVKQLKAQLEAMLL 885

Query: 843 ------------------------LEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKN 878
                                   LE+L  KSQ LE EL R +++L + T  A  EAEK 
Sbjct: 886 GLFKNANGIRDGCGIKSEESAQLRLEELASKSQLLEAELGRKTKQLMDATAKAAVEAEKR 945

Query: 879 KAAQEVIRSLTAQAR 893
           +AA+ VI+SLTAQ +
Sbjct: 946 RAAKHVIKSLTAQLK 960


>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
          Length = 1062

 Score =  907 bits (2344), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 504/923 (54%), Positives = 652/923 (70%), Gaps = 54/923 (5%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           VERD EQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++G EEK LKLSHVSRI
Sbjct: 11  VERDIEQAIIALKKGAYLLKYGRRGKPKFCPFRLSNDETVLIWFSGNEEKHLKLSHVSRI 70

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISE----DN 125
           I GQRT    RYP+PEKEYQSFSLIY  RSLD+   DKDEAE+WFT L+ALIS     + 
Sbjct: 71  ISGQRT----RYPRPEKEYQSFSLIYSERSLDV---DKDEAEVWFTGLKALISHCHQRNR 123

Query: 126 RCKSRSDSISSD--SPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           R +SRSD   S+  SPR++T+++SP H    S+D   KD  +   I   +E+ P+N L K
Sbjct: 124 RTESRSDGTPSEANSPRTYTRRSSPLHSPFSSNDSLQKDGSNHLRIHSPFESPPKNGLDK 183

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANS--RSSTADSFRISLSSAVSSSS 241
           AFS++  +    K +  ++S + S   V SGG D  +   R    D+FR+S+SSAVSSSS
Sbjct: 184 AFSDMALYAVPPKGFYPSDSATIS---VHSGGSDSMHGHMRGMGMDAFRVSMSSAVSSSS 240

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
            GS H+D D LGDVFIWGEG+G G+LGG    V  S   + D+LLPK LEST+VLD Q+I
Sbjct: 241 HGSGHDDGDALGDVFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDVQNI 300

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           ACG +HAVLVTKQG+ FSWGE S G+LGHGV++++  PKLIDALN +NI +VACGEFH+C
Sbjct: 301 ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSC 360

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AVTLSGDLYTWG G  + G+LG  +E+SHW+P++V+  +EG+ +SSI CGP+HTA +TSA
Sbjct: 361 AVTLSGDLYTWGKG--DFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSA 418

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+LFTFGDGTFG LGHGD+ S  +PREV++LK L+TV A+CGVWHTAA+VEV   +S S+
Sbjct: 419 GQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 478

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             SS KLFTWGDG +G+LGHG+ EP++VP CV    + +FC+VACGHS+T+ALT +G V+
Sbjct: 479 NCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVY 538

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           +MGS  YGQLG+  + GK P R+EG +   ++E+IACG+YH+AV++S++EVYTWGKG+NG
Sbjct: 539 TMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 598

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           +LGHGD +++ +PTLVE+L+DKQVKS+ CG+NFTAA+C+H+  S  D S+CSGCR  F+F
Sbjct: 599 RLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVCIHRWASGMDQSMCSGCRQPFSF 658

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSES--GSNSQI 719
           +R+RHNCYNCGLV+C  C+SKKS+K  +AP  NKPYRVCD CF KL  T E+   S+S +
Sbjct: 659 KRKRHNCYNCGLVFCHSCTSKKSLKACMAPNPNKPYRVCDKCFNKLKKTMETDPSSHSSL 718

Query: 720 PRNSSGLFQNCKRVTEKENMNSRSATDGQ---------------SKPKGKSYH-----AS 759
            R  S + Q    + + +  +SRS  DGQ                  K K Y       S
Sbjct: 719 SRRGS-INQGSDPIDKDDKFDSRS--DGQLARFSLMESMRQVDSRHKKNKKYEFNSSRVS 775

Query: 760 PSLNGKFQWEP-------NSDFIKSNK-ISASPPGSRRVSRAP-SPISRKSSPACSITMN 810
           P  +G  Q          N  F  S K  SAS PGSR VSRA      R S P  +    
Sbjct: 776 PIPSGSSQRGALNIAKSFNPVFGASKKFFSASVPGSRIVSRATSPISRRPSPPRSTTPTP 835

Query: 811 SFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQI 870
           + + LA  + + + +K+TNDN +QE   LR+Q+E LTRK+Q  EVELERT+++LKE   I
Sbjct: 836 TLSGLATPKFVVDDTKRTNDNLSQEVVKLRSQVESLTRKAQLQEVELERTTKQLKEALAI 895

Query: 871 AQEEAEKNKAAQEVIRSLTAQAR 893
             EE  + KAA+EVI+SLTAQ +
Sbjct: 896 TNEETTRCKAAKEVIKSLTAQLK 918


>gi|12325184|gb|AAG52535.1|AC013289_2 putative regulator of chromosome condensation; 48393-44372
           [Arabidopsis thaliana]
          Length = 1028

 Score =  896 bits (2316), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 485/933 (51%), Positives = 634/933 (67%), Gaps = 70/933 (7%)

Query: 1   MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ 60
           MA   +    ERD EQA+  LKKG+YLLKYGRRGKPKFCPF+L+SDE  L+WY+GKEEKQ
Sbjct: 1   MADSLRTSFSERDVEQAITSLKKGSYLLKYGRRGKPKFCPFQLTSDESALVWYSGKEEKQ 60

Query: 61  LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRAL 120
           +KLS V RI+PGQRT  F+RYP+PEKEYQSFSLI  +RSLDLICKDKDEAE+W   L++L
Sbjct: 61  IKLSQVLRIVPGQRTPTFKRYPRPEKEYQSFSLICPDRSLDLICKDKDEAEVWVVGLKSL 120

Query: 121 ISEDNRCKSRS----DSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENS 176
           I+     K ++    +  S++ P  H ++ SP         +T  D    Q I  + E S
Sbjct: 121 ITRVKVSKWKTTIKPEITSAECPTPHARRVSPF--------VTILD----QVIQPSNETS 168

Query: 177 PQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFV-----ASGGLDDANSRSSTADSFRI 231
            Q RLGK FS++++ TA      + E+   S N           ++++N R ST D FR+
Sbjct: 169 TQTRLGKVFSDIVAITAPPSNNNQTEA---SGNLFCPFSPTPANVENSNLRFSTNDPFRL 225

Query: 232 SLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE 291
           SLSSAVS+SS GS HEDFD LGDVF+WGE + +G+L G  N +  ++    DALLPK LE
Sbjct: 226 SLSSAVSTSSHGSYHEDFDALGDVFVWGESISDGVLSGTGNSLNSTT---EDALLPKALE 282

Query: 292 STVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH 351
           ST+VLDAQ+IACG  HAVLVTKQG+IFSWGEG GGKLGHG+E D   PK I ++ G    
Sbjct: 283 STIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFK 342

Query: 352 MVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCG 411
            +ACG+FHTCA+T SGDLY+WGDG HN+ LLG  +E S WIP++V+G ++GL +S + CG
Sbjct: 343 SLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACG 402

Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIV 471
           PWHTA + S+G+LFTFGDGTFGALGHGDR STSVPREVE+L  L     +CGVWHTAA+V
Sbjct: 403 PWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVV 462

Query: 472 EVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
           EV  + S +   SS+ ++FTWGDG +GQLGHGD + +++P CV    + + C+VACGHS+
Sbjct: 463 EVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVACGHSL 522

Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           T++ T+ G V++MGS  YGQLG+P + G FP R+EG+I    +E+IACGSYH+AV++SKS
Sbjct: 523 TVSRTSRGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEASVEEIACGSYHVAVLTSKS 582

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHS 650
           E+YTWGKG NGQLGHG+ ENK+ P +V  LR+KQVK++ CGSNFTA IC+HK V  ++HS
Sbjct: 583 EIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGSNFTAVICVHKWVPGSEHS 642

Query: 651 ICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTT 710
           +C+GCRN FNFRR+RHNCYNCGLV+CK+CSS+KS++ ALAP++NKPYRVC  CF KL  +
Sbjct: 643 LCAGCRNPFNFRRKRHNCYNCGLVFCKVCSSRKSLRAALAPDMNKPYRVCYGCFTKLKKS 702

Query: 711 SESGSNSQIPRNSSGL-FQNCKRVTEKENM-------NSRSATDGQS------------- 749
            ES  ++   R    L  +    V+E++++       N+R ++   S             
Sbjct: 703 RESSPSTPTSRTRKLLNMRKSTDVSERDSLTQKFLSVNARLSSADSSLHYSERRHHRRDL 762

Query: 750 KPKGKSYHASPSLNGKFQWEPNSDFIK-SNKISASP-------PGSRRVSRAPSPISRKS 801
           KP+  + +  PS+NG  Q    S F K S  +   P       PGS   SR  SP+S KS
Sbjct: 763 KPEVNNSNVFPSMNGSLQ-PVGSPFSKGSTALPKIPKNMMVKIPGSGMSSRTTSPVSVKS 821

Query: 802 -SPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERT 860
            SP  S            EV    SKQ  D+FNQ+   L+ Q+E L  K+  LE ELE+T
Sbjct: 822 TSPRRSY-----------EVAAAESKQLKDSFNQDMAGLKEQVEQLASKAHQLEEELEKT 870

Query: 861 SRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
            R+LK  T +A +EAE+N++A+EVIRSLT Q +
Sbjct: 871 KRQLKVVTAMAADEAEENRSAKEVIRSLTTQLK 903


>gi|334183781|ref|NP_177129.2| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|332196844|gb|AEE34965.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1041

 Score =  895 bits (2313), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 485/933 (51%), Positives = 634/933 (67%), Gaps = 70/933 (7%)

Query: 1   MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ 60
           MA   +    ERD EQA+  LKKG+YLLKYGRRGKPKFCPF+L+SDE  L+WY+GKEEKQ
Sbjct: 14  MADSLRTSFSERDVEQAITSLKKGSYLLKYGRRGKPKFCPFQLTSDESALVWYSGKEEKQ 73

Query: 61  LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRAL 120
           +KLS V RI+PGQRT  F+RYP+PEKEYQSFSLI  +RSLDLICKDKDEAE+W   L++L
Sbjct: 74  IKLSQVLRIVPGQRTPTFKRYPRPEKEYQSFSLICPDRSLDLICKDKDEAEVWVVGLKSL 133

Query: 121 ISEDNRCKSRS----DSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENS 176
           I+     K ++    +  S++ P  H ++ SP         +T  D    Q I  + E S
Sbjct: 134 ITRVKVSKWKTTIKPEITSAECPTPHARRVSPF--------VTILD----QVIQPSNETS 181

Query: 177 PQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFV-----ASGGLDDANSRSSTADSFRI 231
            Q RLGK FS++++ TA      + E+   S N           ++++N R ST D FR+
Sbjct: 182 TQTRLGKVFSDIVAITAPPSNNNQTEA---SGNLFCPFSPTPANVENSNLRFSTNDPFRL 238

Query: 232 SLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE 291
           SLSSAVS+SS GS HEDFD LGDVF+WGE + +G+L G  N +  ++    DALLPK LE
Sbjct: 239 SLSSAVSTSSHGSYHEDFDALGDVFVWGESISDGVLSGTGNSLNSTT---EDALLPKALE 295

Query: 292 STVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH 351
           ST+VLDAQ+IACG  HAVLVTKQG+IFSWGEG GGKLGHG+E D   PK I ++ G    
Sbjct: 296 STIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFK 355

Query: 352 MVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCG 411
            +ACG+FHTCA+T SGDLY+WGDG HN+ LLG  +E S WIP++V+G ++GL +S + CG
Sbjct: 356 SLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACG 415

Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIV 471
           PWHTA + S+G+LFTFGDGTFGALGHGDR STSVPREVE+L  L     +CGVWHTAA+V
Sbjct: 416 PWHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVV 475

Query: 472 EVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
           EV  + S +   SS+ ++FTWGDG +GQLGHGD + +++P CV    + + C+VACGHS+
Sbjct: 476 EVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVACGHSL 535

Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           T++ T+ G V++MGS  YGQLG+P + G FP R+EG+I    +E+IACGSYH+AV++SKS
Sbjct: 536 TVSRTSRGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEASVEEIACGSYHVAVLTSKS 595

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHS 650
           E+YTWGKG NGQLGHG+ ENK+ P +V  LR+KQVK++ CGSNFTA IC+HK V  ++HS
Sbjct: 596 EIYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGSNFTAVICVHKWVPGSEHS 655

Query: 651 ICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTT 710
           +C+GCRN FNFRR+RHNCYNCGLV+CK+CSS+KS++ ALAP++NKPYRVC  CF KL  +
Sbjct: 656 LCAGCRNPFNFRRKRHNCYNCGLVFCKVCSSRKSLRAALAPDMNKPYRVCYGCFTKLKKS 715

Query: 711 SESGSNSQIPRNSSGL-FQNCKRVTEKENM-------NSRSATDGQS------------- 749
            ES  ++   R    L  +    V+E++++       N+R ++   S             
Sbjct: 716 RESSPSTPTSRTRKLLNMRKSTDVSERDSLTQKFLSVNARLSSADSSLHYSERRHHRRDL 775

Query: 750 KPKGKSYHASPSLNGKFQWEPNSDFIK-SNKISASP-------PGSRRVSRAPSPISRKS 801
           KP+  + +  PS+NG  Q    S F K S  +   P       PGS   SR  SP+S KS
Sbjct: 776 KPEVNNSNVFPSMNGSLQ-PVGSPFSKGSTALPKIPKNMMVKIPGSGMSSRTTSPVSVKS 834

Query: 802 -SPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERT 860
            SP  S            EV    SKQ  D+FNQ+   L+ Q+E L  K+  LE ELE+T
Sbjct: 835 TSPRRSY-----------EVAAAESKQLKDSFNQDMAGLKEQVEQLASKAHQLEEELEKT 883

Query: 861 SRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
            R+LK  T +A +EAE+N++A+EVIRSLT Q +
Sbjct: 884 KRQLKVVTAMAADEAEENRSAKEVIRSLTTQLK 916


>gi|297838741|ref|XP_002887252.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333093|gb|EFH63511.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1027

 Score =  889 bits (2298), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/929 (51%), Positives = 629/929 (67%), Gaps = 62/929 (6%)

Query: 1   MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ 60
           MA   +  L ERD EQA+  LKKG+YLLKYGRRGKPKFCPF+L+SDE  L+WY+GKEEKQ
Sbjct: 1   MADSSRISLSERDVEQAITSLKKGSYLLKYGRRGKPKFCPFQLTSDESALVWYSGKEEKQ 60

Query: 61  LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRAL 120
           +KLS V RI+PGQRT+ F+RYP+PEKEYQSFSLI  +RSLDLICKDKDEAE+W   L++L
Sbjct: 61  IKLSQVLRIVPGQRTSTFKRYPRPEKEYQSFSLICPDRSLDLICKDKDEAEVWVVGLKSL 120

Query: 121 ISEDNRCKSRS----DSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENS 176
           I+     K ++    +  S++ P  H ++ SP         +T  D    Q I  + E S
Sbjct: 121 ITRVKVSKWKNTIKPEITSAECPTPHARRVSPF--------VTILD----QVIQPSNETS 168

Query: 177 PQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANS--RSSTADSFRISLS 234
            Q RLGK FS+++S TA      + E+ +      +   ++  NS  R ST D  R+SLS
Sbjct: 169 TQTRLGKVFSDIVSITAPPSNNNQTETSANLFCPFSPTPVNVENSSLRFSTNDPIRLSLS 228

Query: 235 SAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTV 294
           SAVS+SS GS HEDFD LGDVF+WGE + +G+L G  N +  ++    D LLPK LEST+
Sbjct: 229 SAVSTSSHGSYHEDFDALGDVFVWGESICDGVLTGTGNSLNSTT---EDVLLPKALESTI 285

Query: 295 VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA 354
           VLDAQ+IACG  HAVLVTKQG+IFSWGEG GGKLGHG+E DV  PK I ++ G     +A
Sbjct: 286 VLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDVQQPKFISSVRGLGFKSLA 345

Query: 355 CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
           CG+FHTCA+T SGDLY+WGDG HN+ LLG  +E S WIP++V+G ++GL +S + CGPWH
Sbjct: 346 CGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGALQGLYVSYVACGPWH 405

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           TA + S+G+LFTFGDG+FGALGHGDR STSVPREV+ L  L     +CGVWHTAA+VEV 
Sbjct: 406 TAVVASSGQLFTFGDGSFGALGHGDRRSTSVPREVKILSGLIVTKVACGVWHTAALVEVT 465

Query: 475 GKTSGSN-GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
            + S +  G S  ++FTWGDG +GQLGHGD + +++P CV    + + C+VACGHS+T++
Sbjct: 466 NEASEAEVGSSRGQVFTWGDGEKGQLGHGDNDAQLLPECVISLSNENICQVACGHSLTVS 525

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
           LT+TG V++MGS  YGQLG+P + G FP R+EG+I    +E+IACGSYH+AV++SKSE+Y
Sbjct: 526 LTSTGHVYTMGSTAYGQLGNPTAKGNFPARVEGDIVEASVEEIACGSYHVAVLTSKSEIY 585

Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICS 653
           TWGKG NGQLGHG  ENK+ P +V  L++KQVK++ CGSNFTA IC+HK V  ++HS+C+
Sbjct: 586 TWGKGLNGQLGHGTIENKREPAVVGFLKEKQVKAITCGSNFTAVICVHKWVPGSEHSLCA 645

Query: 654 GCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSES 713
           GCRN FNFRR+RHNCYNCGLV+CK+CSS+KS++ ALAP++NKPYRVC  CF KL  + E 
Sbjct: 646 GCRNPFNFRRKRHNCYNCGLVFCKVCSSRKSLRAALAPDMNKPYRVCYGCFTKLKKSREP 705

Query: 714 GSNSQIPRNSSGL-FQNCKRVTEKENMNSR--------SATDG------------QSKPK 752
            +++   R    L  +    V+E++++  +        S+ D               KP+
Sbjct: 706 STSTPTSRARKLLNMRKSTDVSERDSLTQKFLSAHARISSADSLLHYGERRHHRRDLKPE 765

Query: 753 GKSYHASPSLNGKFQWEPNSDFIKSNKISASP-------PGSRRVSRAPSPISRKS-SPA 804
             + +  PS+NG  Q   +     S  +   P       PGS   SR  SP+S KS SP 
Sbjct: 766 VNNSNVFPSMNGSLQLVGSPLSKGSTALPKIPKNMMVKIPGSGMSSRTTSPVSVKSTSPR 825

Query: 805 CSITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKL 864
            S            EV    SKQ  D+FN +   L+ Q+E LT K+  LE ELE+T R+L
Sbjct: 826 RSY-----------EVAAAESKQIKDSFNHDMAGLKEQVEQLTSKTHQLEEELEKTKRQL 874

Query: 865 KETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
           K  T +A +EAE+N++A+EVIRSLT Q +
Sbjct: 875 KVVTAMAADEAEENRSAKEVIRSLTTQLK 903


>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
          Length = 901

 Score =  883 bits (2281), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 481/865 (55%), Positives = 617/865 (71%), Gaps = 33/865 (3%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           VERD EQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEEKQL+LSHVSRI
Sbjct: 16  VERDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESILIWFSGKEEKQLRLSHVSRI 75

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN---- 125
           IPGQRTA+FQRYP+PEKE QSFSLI  +RSLD+ICKDKDEAE+WF  L+ LI+  +    
Sbjct: 76  IPGQRTAIFQRYPRPEKECQSFSLISHDRSLDIICKDKDEAEVWFAGLKTLITRSHQRKW 135

Query: 126 RCKSRSDSISS--DSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           R +SRSD +SS   SPR++T+++SP      S+D  +KD  +   +   + + P+  L K
Sbjct: 136 RTESRSDMLSSGTTSPRTYTRRSSPLSSPFSSNDSVHKDGVENYRLRSPFGSPPKVGLEK 195

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDAN--SRSSTADSFRISLSSAVSSSS 241
           AFS+++S+ A  K +  ++S + S++ V+SG  D+ N  SR    D+FR+SLSSAVSSSS
Sbjct: 196 AFSDIVSYAAPPKPFFPSDSNAGSVHSVSSGQSDNTNLHSRGIPMDAFRVSLSSAVSSSS 255

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
            GS H+D D LGDVFIWGEG G G+LGG  + V  SS    D L+PK LE  V LD Q+I
Sbjct: 256 HGSGHDDGDALGDVFIWGEGTGEGILGGGNSRVGNSSGVNMDCLIPKPLEFAVKLDVQNI 315

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           +CG +HA LVTKQG+I+SWGE SGG+LGHGV+ DV  PKLIDAL   NI +VACGE+HTC
Sbjct: 316 SCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTC 375

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AVTLSGDLYTWG+G  N GLLG  +E+SHW+P++V+G +EG+ +S+I CGPWHTA +TSA
Sbjct: 376 AVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPWHTAIVTSA 435

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+LFTFGDG+FG LGHGDR S SVPREVE+LK L+TV A+CGVWHTAA+VEV    S S+
Sbjct: 436 GQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRTVRAACGVWHTAAVVEVMVGNSSSS 495

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             SS K+FTWGDG +G+LGHGD + R+VP CV    + +FC++ACGH +T+ALT +G V+
Sbjct: 496 NCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVY 555

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           +MGS  YGQLG+P + G  P R+EG +   ++E+I+CG+YH+AV++S++EVYTWGKGANG
Sbjct: 556 TMGSPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANG 615

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           +LGHGD +++ +PTLVEAL+DKQV++VVCG NFTAAIC+HK VS  D S+CSGCR  FN 
Sbjct: 616 RLGHGDTDDRSSPTLVEALKDKQVRTVVCGINFTAAICIHKWVSGVDQSMCSGCRLPFNL 675

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPR 721
           RR+RHNCYNC LV+C  CSSKKS+K +LAP  NKPYRVCD C+ KLN   E+   S   R
Sbjct: 676 RRKRHNCYNCALVFCHACSSKKSLKASLAPNPNKPYRVCDSCYSKLNKGPETDRYSSAKR 735

Query: 722 NSSGLFQNCKRVTEKE-------------NMNSRSATDGQSKPKGKSY-----HASPSLN 763
            S  + Q      ++E             ++ S    D ++  K K +       SP  N
Sbjct: 736 GS--VIQGFNDSVDEELETKSNAQLSRLSSLESFKHMDSRTSKKNKKFEFNSSRVSPIPN 793

Query: 764 GKFQW---EPNSDFIKSNK-ISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSE 819
           G   W     +  F  S K  SAS PGSR VSRA SP+SR++SP  S T         S 
Sbjct: 794 GSSHWSGLNISKSFGSSKKFFSASVPGSRIVSRATSPVSRRASPPRSTTPTPTLGGLTSP 853

Query: 820 VIFEYSKQTNDNFNQEPDVLRAQLE 844
            + +  K  ND+ +QE   LR+Q+ 
Sbjct: 854 RVVDGVK-PNDSISQEVLSLRSQVH 877


>gi|6522549|emb|CAB61992.1| putative protein [Arabidopsis thaliana]
          Length = 951

 Score =  858 bits (2218), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 478/954 (50%), Positives = 631/954 (66%), Gaps = 85/954 (8%)

Query: 1   MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ 60
           MA FQ+++  +R+ EQA+ +LKKG YLLKYGRRGKPKF PFRLSSDE  L+WY GK+EK+
Sbjct: 1   MACFQRSVPTDRENEQAIAILKKGAYLLKYGRRGKPKFYPFRLSSDEIYLLWYCGKKEKR 60

Query: 61  LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRAL 120
           LKLS V+RIIPGQRTAVF+RYPQP KEYQSFSLIY  RSLDL   DKDEAE W T LRAL
Sbjct: 61  LKLSSVTRIIPGQRTAVFRRYPQPTKEYQSFSLIYGERSLDL---DKDEAEFWLTTLRAL 117

Query: 121 ISEDNR----CKSRSDSISSDS-PRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYEN 175
           +S +N       SRS S++ ++  +S + +NS S++ S+SSD + ++         ++ N
Sbjct: 118 LSRNNSSALVLHSRSRSLAPENGEQSSSSQNSKSNIRSVSSDTSYEEHAKKAS--GSHCN 175

Query: 176 SPQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSST-ADSFRISLS 234
           +PQ RLGK FSEVLS TA  KA +  E V K          +   + SS   D+ + S+S
Sbjct: 176 TPQ-RLGKVFSEVLSQTAVLKALSLDELVHKPHTSPPETIENRPTNHSSPGVDTSKYSIS 234

Query: 235 SAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTV 294
           SAVSSSSQGS  ED   L DVF+WGE +G+GLLGG ++    SS+   D+ LPKVL+S V
Sbjct: 235 SAVSSSSQGSTFEDLKSLCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHV 294

Query: 295 VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA 354
            LDAQSI+CG+ +AVLVTKQGQ++SWGE SGG+LGHGV + V +PKLID  NGS + +  
Sbjct: 295 ALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELAD 354

Query: 355 CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
           CGEFHTCAVT SGDLY WGDG HN GLLG  S  SHW P ++ GQMEG+ + +I CGPWH
Sbjct: 355 CGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWH 414

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           TA +TS GKLFTFGDGTFGALGHGDR ST++PREVE L   +T+ A+CGVWH+AA+V V 
Sbjct: 415 TAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVF 474

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
           G+ +     SS KLFTWGDG +G+LGHGD E R++P CV   D  SF +VACG SIT+AL
Sbjct: 475 GEAT-----SSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVAL 529

Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
           + +GQV++MG+AD           + P+ IEG +   +++++ACG +HIAV++SK+EVYT
Sbjct: 530 SMSGQVYAMGTADPSH-----DIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYT 584

Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSG 654
           WGKG+NGQLGHGD E +  PTLV+AL+ KQV+ VVCGSN+TA ICLHK ++  D + CSG
Sbjct: 585 WGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGTDSTKCSG 644

Query: 655 CRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSES- 713
           CR+ FN+ R+ HNCYNCG V+C  C+SKKS+  A+AP+ N+PYRVCDDC+IKL    ES 
Sbjct: 645 CRHPFNYMRKLHNCYNCGSVFCNSCTSKKSLAAAMAPKTNRPYRVCDDCYIKLEGIRESL 704

Query: 714 --------GSNSQIPR------------------NSSGLFQNCKRVTEKENMNSRSATDG 747
                    SN+ +P                   +S   F    R T+  ++ +   T G
Sbjct: 705 ATPANSARFSNASLPSSYEMDEIGITPQRQLLRVDSFDFF----RQTKHADLKTIGETSG 760

Query: 748 QSKPKGKSYHASPSLNGKFQW----------------------------EPNSDFIKSNK 779
            S     S H++  + G F                              + ++  +  + 
Sbjct: 761 GSCT--SSIHSNMDIKGSFNLKGIRRLSRLTSFDSVQEEGKQRTKHCASKSDTSSLIRHS 818

Query: 780 ISASPPGSRRVSRAPSPISRKSSPACSITMNS--FTDLANSEVIFEYSKQTNDNFNQEPD 837
           ++   P SRR S    P+S KSSP  S+   S   TD+ + E++ E  K++N   + E  
Sbjct: 819 VTCGLPFSRRGSVELFPLSIKSSPVESVATTSDFTTDITDHELLQEVPKKSNQCLSHEIS 878

Query: 838 VLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQ 891
           VL+AQ+E+LT KS+ LE EL +TS+KL+    +A+++AEK K+++E++RSLT Q
Sbjct: 879 VLKAQVEELTLKSKKLETELGKTSKKLEVAVLMARDDAEKIKSSEEIVRSLTLQ 932


>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
 gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
          Length = 1063

 Score =  857 bits (2213), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 482/934 (51%), Positives = 631/934 (67%), Gaps = 81/934 (8%)

Query: 1   MASFQQNILV---ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKE 57
           MA+ +  + V   ERD E A+  LK+G  LLKYGRRG+PKFCPFRLS+DE  LIW +GKE
Sbjct: 1   MATLEPALRVGPLERDVELAITALKRGAQLLKYGRRGRPKFCPFRLSNDESALIWISGKE 60

Query: 58  EKQLKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTAL 117
           EK LKLSHVSRIIPGQRT                           ICKDK+EAE+WFT L
Sbjct: 61  EKHLKLSHVSRIIPGQRT---------------------------ICKDKEEAEVWFTGL 93

Query: 118 RALISE----DNRCKSRSDSISSD--SPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILV 171
           +ALIS       R ++R+D + S+  SPR++T ++SP   +  S D + KD  D   +  
Sbjct: 94  KALISHHQLWKKREETRNDGLLSEANSPRAYTLRSSPLSFAFGSDDSSMKDGTDPLRLRT 153

Query: 172 AYENSPQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSR--SSTADSF 229
            Y++ P+  L KA S+ +        YT    V   L      G D+   R  ++  ++F
Sbjct: 154 PYDSPPKAGLEKALSDAV--------YTVPPKVLFPLESACGPGSDETTGRMKNTNTEAF 205

Query: 230 RISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVN---GVEISSADRRDALL 286
           R+SLSSAVSSSSQGS  +D D LGDV+IWGEG G G+LGG V+   G +I    + D+ +
Sbjct: 206 RVSLSSAVSSSSQGSGRDDNDALGDVYIWGEGTGEGILGGGVHKSGGSDI----QMDSFV 261

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           PK LES V+LD Q+IACG +HA LVTKQG++FSWGE  GG+LGHGV++DVS+PK +D L 
Sbjct: 262 PKALESAVLLDVQAIACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFVDGLK 321

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
             N+ +VACGE+ +CAVTLSGDLY WG   +N GLLG  SE + W+PRK+SG +EG+ +S
Sbjct: 322 NFNVELVACGEYLSCAVTLSGDLYIWGGNAYNFGLLGCGSEATQWVPRKLSGPLEGIHVS 381

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
           S+ CGPWHTA +TSAG+LFTFGDGTFG LGHGDRSS S PREVE+LK L+T+  +CGVWH
Sbjct: 382 SVSCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRSSVSTPREVESLKGLRTMRVACGVWH 441

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           TAA+VEV   +S S+  SS KLFTWGDG +G+LGHGD E R+VP  V    + SFC+VAC
Sbjct: 442 TAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVPTYVATLVEPSFCQVAC 501

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
           GHS+T+ALT +GQV++MGS  YGQLG+P + GK PTR+EG +   ++E++ACG+YH+AV+
Sbjct: 502 GHSLTVALTTSGQVYTMGSPVYGQLGNPQADGKVPTRVEGKLMKNFVEELACGAYHVAVL 561

Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSI 646
           +S++EVYTWGKGANG+LGHGD +++  P++VEAL+DKQVK ++CG++FTAAICLHK VS 
Sbjct: 562 TSRTEVYTWGKGANGRLGHGDTDDRNFPSIVEALKDKQVKGIICGTSFTAAICLHKWVSG 621

Query: 647 ADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCF-- 704
            D S+CSGCR  FNF+R+RHNCYNCGLV+C  CSSKKS+K ++AP  NKPYRVCD CF  
Sbjct: 622 IDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSSKKSLKASMAPNPNKPYRVCDYCFSK 681

Query: 705 IKLNTTSESGSNSQIPRNSSGLFQNCKRVTEK-ENMNSRS-ATDGQSKPKGKS------- 755
           I+ +T ++S  +S + R  S   Q    +TEK EN N+RS A  G++     S       
Sbjct: 682 IRRSTGTDSSVHSTLRRRGSE-NQGLNEITEKSENSNTRSHAKLGRNFSMESSKEVESIS 740

Query: 756 -----------YHASPS---LNGKFQWEPNSDFIKSNK-ISASPPGSRRVSRAPSPISRK 800
                         SPS   ++ +  +  +  F  S K  SAS PGSR VSRA SP SR+
Sbjct: 741 SRRNRKSSSISTQVSPSAYDVSQRNAFNNSKSFGSSKKFFSASVPGSRIVSRATSPTSRR 800

Query: 801 SSPACSITMNSFTDLAN-SEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELER 859
           SSP  + T      +    +V  + + + ND+  +E   LRAQ+E+LT K+Q  EVELER
Sbjct: 801 SSPPRATTPTPALSVHELPKVAVDGTGRLNDSLREEVVKLRAQVEELTHKAQLQEVELER 860

Query: 860 TSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
           T+ +LKE   +A+EE  K KAA+EVI+SLTAQ +
Sbjct: 861 TTSQLKEAVAVAEEETAKCKAAKEVIKSLTAQLK 894


>gi|240255530|ref|NP_190350.4| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332644794|gb|AEE78315.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 954

 Score =  850 bits (2195), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/949 (49%), Positives = 627/949 (66%), Gaps = 85/949 (8%)

Query: 6   QNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSH 65
           +++  +R+ EQA+ +LKKG YLLKYGRRGKPKF PFRLSSDE  L+WY GK+EK+LKLS 
Sbjct: 9   RSVPTDRENEQAIAILKKGAYLLKYGRRGKPKFYPFRLSSDEIYLLWYCGKKEKRLKLSS 68

Query: 66  VSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN 125
           V+RIIPGQRTAVF+RYPQP KEYQSFSLIY  RSLDL   DKDEAE W T LRAL+S +N
Sbjct: 69  VTRIIPGQRTAVFRRYPQPTKEYQSFSLIYGERSLDL---DKDEAEFWLTTLRALLSRNN 125

Query: 126 R----CKSRSDSISSDS-PRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNR 180
                  SRS S++ ++  +S + +NS S++ S+SSD + ++         ++ N+PQ R
Sbjct: 126 SSALVLHSRSRSLAPENGEQSSSSQNSKSNIRSVSSDTSYEEHAKKAS--GSHCNTPQ-R 182

Query: 181 LGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSST-ADSFRISLSSAVSS 239
           LGK FSEVLS TA  KA +  E V K          +   + SS   D+ + S+SSAVSS
Sbjct: 183 LGKVFSEVLSQTAVLKALSLDELVHKPHTSPPETIENRPTNHSSPGVDTSKYSISSAVSS 242

Query: 240 SSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQ 299
           SSQGS  ED   L DVF+WGE +G+GLLGG ++    SS+   D+ LPKVL+S V LDAQ
Sbjct: 243 SSQGSTFEDLKSLCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQ 302

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           SI+CG+ +AVLVTKQGQ++SWGE SGG+LGHGV + V +PKLID  NGS + +  CGEFH
Sbjct: 303 SISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFNGSTVELADCGEFH 362

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           TCAVT SGDLY WGDG HN GLLG  S  SHW P ++ GQMEG+ + +I CGPWHTA +T
Sbjct: 363 TCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVT 422

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
           S GKLFTFGDGTFGALGHGDR ST++PREVE L   +T+ A+CGVWH+AA+V V G+ + 
Sbjct: 423 SEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCRTIKAACGVWHSAAVVSVFGEAT- 481

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
               SS KLFTWGDG +G+LGHGD E R++P CV   D  SF +VACG SIT+AL+ +GQ
Sbjct: 482 ----SSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQVACGQSITVALSMSGQ 537

Query: 540 VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
           V++MG+AD           + P+ IEG +   +++++ACG +HIAV++SK+EVYTWGKG+
Sbjct: 538 VYAMGTADPSH-----DIVRAPSCIEGGLGKSFVQEVACGFHHIAVLNSKAEVYTWGKGS 592

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQF 659
           NGQLGHGD E +  PTLV+AL+ KQV+ VVCGSN+TA ICLHK ++  D + CSGCR+ F
Sbjct: 593 NGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGTDSTKCSGCRHPF 652

Query: 660 NFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSES------ 713
           N+ R+ HNCYNCG V+C  C+SKKS+  A+AP+ N+PYRVCDDC+IKL    ES      
Sbjct: 653 NYMRKLHNCYNCGSVFCNSCTSKKSLAAAMAPKTNRPYRVCDDCYIKLEGIRESLATPAN 712

Query: 714 ---GSNSQIPR------------------NSSGLFQNCKRVTEKENMNSRSATDGQSKPK 752
               SN+ +P                   +S   F    R T+  ++ +   T G S   
Sbjct: 713 SARFSNASLPSSYEMDEIGITPQRQLLRVDSFDFF----RQTKHADLKTIGETSGGSCT- 767

Query: 753 GKSYHASPSLNGKFQW----------------------------EPNSDFIKSNKISASP 784
             S H++  + G F                              + ++  +  + ++   
Sbjct: 768 -SSIHSNMDIKGSFNLKGIRRLSRLTSFDSVQEEGKQRTKHCASKSDTSSLIRHSVTCGL 826

Query: 785 PGSRRVSRAPSPISRKSSPACSITMNS--FTDLANSEVIFEYSKQTNDNFNQEPDVLRAQ 842
           P SRR S    P+S KSSP  S+   S   TD+ + E++ E  K++N   + E  VL+AQ
Sbjct: 827 PFSRRGSVELFPLSIKSSPVESVATTSDFTTDITDHELLQEVPKKSNQCLSHEISVLKAQ 886

Query: 843 LEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQ 891
           +E+LT KS+ LE EL +TS+KL+    +A+++AEK K+++E++RSLT Q
Sbjct: 887 VEELTLKSKKLETELGKTSKKLEVAVLMARDDAEKIKSSEEIVRSLTLQ 935


>gi|356534059|ref|XP_003535575.1| PREDICTED: uncharacterized protein LOC100783270 [Glycine max]
          Length = 1120

 Score =  841 bits (2173), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/924 (49%), Positives = 610/924 (66%), Gaps = 59/924 (6%)

Query: 1   MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ 60
           MA        +RD +QA+  LKKG  LLKYGR+GKPKFCPFRLS+DE  LIW +   E+ 
Sbjct: 1   MADLVSYRNADRDIDQALIALKKGAQLLKYGRKGKPKFCPFRLSNDELSLIWISSSGERN 60

Query: 61  LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALR 118
           LKLS VSRIIPGQRTAVFQRY  PEK+Y SFSLIY N  RSLDLICKDK EAE+W   L+
Sbjct: 61  LKLSSVSRIIPGQRTAVFQRYLCPEKDYLSFSLIYNNGKRSLDLICKDKVEAEVWIAGLK 120

Query: 119 ALISEDNRCKSRSDSISS-----DSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAY 173
           ALIS     +S+ D  S      D  R  T  +     +S+S D+++ D      + V+ 
Sbjct: 121 ALISSGQGGRSKIDGWSDGGLYLDDSRDLTSNSPSESSASVSRDISSPD------VSVSL 174

Query: 174 EN-SPQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRIS 232
            N SPQ+     F   L+         R+ + S   N    G         S++D FR+S
Sbjct: 175 ANTSPQSFY---FESTLNIE-------RSHAPSNPSNMQVKG---------SSSDVFRVS 215

Query: 233 LSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLES 292
           +SSA S+SS GS  +D+D LGDV+IWGE +   ++           + R D LLP+ LES
Sbjct: 216 VSSAPSTSSHGSAPDDYDALGDVYIWGEVICENVVKVGAEKSASYFSPRTDILLPRPLES 275

Query: 293 TVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM 352
            VVLD   IACG KHA LVT+QG++F+WGE SGG+LGHGV  +V  P+L++A+  + +  
Sbjct: 276 NVVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVIQPRLVEAMASTTVDF 335

Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
           VACGEFHTCAVT++G+LYTWGDG HN GLLG  +++SHWIP++++G +EGLQ++ + CGP
Sbjct: 336 VACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVALVTCGP 395

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           WHTA ITS G+LFTFGDGTFG LGHGDR + S PREVE+L  L+T+  +CGVWHTAA+VE
Sbjct: 396 WHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVWHTAAVVE 455

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
           V   T  S  +SS KLFTWGDG + +LGHGD + R+ P CV +  D +F ++ACGHS+T+
Sbjct: 456 VI-VTQSSASVSSDKLFTWGDGDKNRLGHGDKDARLEPTCVSLLIDSNFHRIACGHSLTV 514

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
            LT +G+VF+MGS+ YGQLG+P S GK P  ++  +    +E+IACG+YH+AV++SK+EV
Sbjct: 515 GLTTSGEVFTMGSSVYGQLGNPQSDGKVPCLVKDKLAGESVEEIACGAYHVAVLTSKNEV 574

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSIC 652
           YTWGKGANG+LGHGD E+++TPTLVEAL+D+ VK + CGSN++AAICLHK VS A+ S C
Sbjct: 575 YTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYSAAICLHKWVSGAEQSQC 634

Query: 653 SGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSE 712
           S CR  F F R+RHNCYNCGLV+C  CSS+K+++ +LAP   KPYRVCD CF+KL   +E
Sbjct: 635 SACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRASLAPNPGKPYRVCDSCFVKLIKVAE 694

Query: 713 SGSNSQ---IPR----NSSGLFQNCKRVTE---KENMNSRSATDGQSKPKGKSYHASPSL 762
           SG+N++   +PR    N   L ++  R+T+     NM+     D ++  K      + SL
Sbjct: 695 SGNNNRRNAMPRLSGENKDRLEKSELRLTKTAVPSNMDLIKQLDSKAAAKQGKKADTFSL 754

Query: 763 NGKFQWEPNS-----DFIKSNKISASPPGSRRV-------SRAPSPISRKSSPACSIT-M 809
               Q  P S     D + S  I       R V       SR+ SP SR+ SP  S T +
Sbjct: 755 VRTSQ--PQSLLQLKDVVLSTAIDLKRTAPRPVLTPSGVSSRSVSPFSRRPSPPRSATPI 812

Query: 810 NSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQ 869
            + + L+ S+ I +  K+TN+  NQE   LR Q+E L ++ +  E+EL+R+++K +E   
Sbjct: 813 PTTSGLSFSKSITDSLKKTNELLNQEVLKLRGQVETLRQRCELQELELQRSTKKTQEAMA 872

Query: 870 IAQEEAEKNKAAQEVIRSLTAQAR 893
           +A EE+ K+KAA+EVI+SLTAQ +
Sbjct: 873 LAAEESAKSKAAKEVIKSLTAQLK 896


>gi|168018623|ref|XP_001761845.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686900|gb|EDQ73286.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1131

 Score =  838 bits (2166), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 483/957 (50%), Positives = 631/957 (65%), Gaps = 68/957 (7%)

Query: 1   MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ 60
           MA   ++ ++ERD EQA+  LKKG  LLKYGRRGKPKFCPF+LSSDE  LIWY+G EEK+
Sbjct: 1   MADQSRHGVLERDIEQAITALKKGAQLLKYGRRGKPKFCPFKLSSDENALIWYSGGEEKR 60

Query: 61  LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALR 118
           L LS VSRIIPGQRT VF RYP+PEKE QS SL++ N  RSLD+ICKDKDEAE+WF  L+
Sbjct: 61  LWLSTVSRIIPGQRTPVFLRYPRPEKECQSLSLLHSNEERSLDVICKDKDEAEVWFVGLK 120

Query: 119 ALISEDNRCKSRSDSISSD------SPRSHTQKNSPSHVSSISSDLTNKDSGD---TQPI 169
           A ++     KS+ +++  +      SP + T+ +SP      S+D   ++SGD   T   
Sbjct: 121 ASVAGAQLRKSKFNNVRHERTVDIVSP-ALTRNSSPLTSPFGSTDNLQQESGDFFKTSSF 179

Query: 170 LVAYENSPQNRLGKAFSEVLS---FTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTA 226
           + +   S +  LG   S + S   F A +   +     S   +   S  L  A +  S  
Sbjct: 180 IGSPLQSEKGYLGGPTSTIDSKNNFDAGSVGGSMHSGSSSMGSDSVSAHLRLAGAGQS-- 237

Query: 227 DSFRISLSSAVSSSSQGSCHEDFDGL------GDVFIWGEGLGNGLLGGAVNGVEISSAD 280
           D++RIS+SSAVSSSSQ S H + DGL      GDV++WGEG+G+G+LGG ++ +    A 
Sbjct: 238 DNYRISMSSAVSSSSQSSQHGE-DGLHYAEPLGDVYMWGEGVGDGILGGGIHRIGSGGAI 296

Query: 281 RRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPK 340
             DALLPK LES +VLD Q IACG KHA LVTKQG++F+WGE SGG+LGHGV+ DVS+P+
Sbjct: 297 NLDALLPKPLESALVLDVQLIACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQ 356

Query: 341 LIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM 400
           L++AL  S   +VACGE+H CAVTLSGDLY+WGDG HNLGLLG  ++ISHWIP++V+G +
Sbjct: 357 LVEALASSTTEVVACGEYHACAVTLSGDLYSWGDGTHNLGLLGHGNDISHWIPKRVNGPL 416

Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
           EGL+++SI CGPWHTA +T+ G LFTFGDGTFG LGH DR S   PREVE+LK L+TV A
Sbjct: 417 EGLRVASIACGPWHTALVTTTGLLFTFGDGTFGVLGHNDRKSAYSPREVESLKGLRTVRA 476

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
           +CGVWHTAA+VEV   +S +   SS KLFTWGDG +G+LGHGD E R+VP CV    D +
Sbjct: 477 ACGVWHTAAVVEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLVPTCVAALVDHN 536

Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS 580
           F +VACG+S+T+ALT  G VF+MGS+ YGQLG P + GK P  +EG +   Y+EDIACG+
Sbjct: 537 FRQVACGYSLTVALTTKGGVFTMGSSTYGQLGDPQADGKLPGLVEGKLVEAYVEDIACGA 596

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           +H+AV++  SEVYTWGKGANG+LGHGD E++ TPTLVEAL++KQVKS+ CG+ FTAAICL
Sbjct: 597 HHVAVLTHNSEVYTWGKGANGRLGHGDLEDRNTPTLVEALKEKQVKSIACGATFTAAICL 656

Query: 641 HKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVC 700
           HK +S AD + CSGC+  F F R+RHNCYNCGLVYC  CSSKK++K +LAP   KP+RVC
Sbjct: 657 HKWLSGADQNACSGCKQPFGFTRKRHNCYNCGLVYCHACSSKKALKASLAPNPGKPFRVC 716

Query: 701 DDCFIKLNTTSESG-------SNSQIPRNSSGL------FQNCKRVTEKENMNS------ 741
           D CF+KL    E G       S   +P  + G+       +   R    +  N+      
Sbjct: 717 DPCFLKLRKAGEGGLGGVAALSKRSVPNRNRGVEVKDGSGKGEFRAPRPQGPNTGRPPIT 776

Query: 742 ---------RSATDGQSKPKGKSYHASPSLNG--------------KFQWEP-NSDFIKS 777
                    +S T    KP+  S   SP+ NG               F   P  +     
Sbjct: 777 LEFGKVGEGKSGTKRGKKPENSSSRISPAPNGVSSGATWGAVSVPAGFSKPPFQTGLNGP 836

Query: 778 NKISASPPGSRRVSRAPSPISRKSSPACSITMNSF-TDLANSEVIFEYSKQTNDNFNQEP 836
             +S+S    R VSRA SP+SR+SSP  S T     + L   + + E  K+TND  + E 
Sbjct: 837 VAVSSSAVAGRAVSRAVSPLSRRSSPPRSTTPTPTGSGLVIPKTVVEDLKKTNDALSDEN 896

Query: 837 DVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
             LR+Q+E L R+ Q  E E++R++++L+    +A EEA K++AA+EVI+SLT+Q +
Sbjct: 897 IQLRSQVESLARQLQNHEKEVQRSAQQLQNAISLATEEAAKSRAAKEVIKSLTSQLK 953


>gi|297815950|ref|XP_002875858.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297321696|gb|EFH52117.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 962

 Score =  838 bits (2165), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/940 (50%), Positives = 619/940 (65%), Gaps = 84/940 (8%)

Query: 16  QAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPGQRT 75
           +A+ +LKKG YLLKYGRRGKPKF PFRLSSDE  L+WY GK+EK+LKLS V+RIIPGQRT
Sbjct: 24  KAIAILKKGAYLLKYGRRGKPKFYPFRLSSDEIYLLWYCGKKEKRLKLSSVTRIIPGQRT 83

Query: 76  AVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDNR-----CKSR 130
           AVF+RYPQP KEYQSFSLIY  RSLDL   DKDEAE W T LRAL+S +N        SR
Sbjct: 84  AVFRRYPQPTKEYQSFSLIYGERSLDL---DKDEAEFWLTTLRALLSRNNSSSALVLHSR 140

Query: 131 SDSISSDS-PRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVL 189
           S S + ++  +S T KNS S++ S+SSD + ++         ++ N+PQ RLGK FSEVL
Sbjct: 141 SRSFAPENGEQSSTSKNSKSNIRSVSSDTSYEEHAKKAS--GSHCNTPQ-RLGKVFSEVL 197

Query: 190 SFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDF 249
           S TA  KA +  E V K          + + + S   D+ + S+SSAVSSSSQGSC ED 
Sbjct: 198 SQTAVLKALSLDELVHKPHTSPPEAIENRSTNHSPAVDTSKYSVSSAVSSSSQGSCFEDL 257

Query: 250 DGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAV 309
             L DVF+WGE +G+GLLGG ++    SS+   D+ LPKVL+S V LDAQSI+CG+ +AV
Sbjct: 258 KSLCDVFVWGESIGDGLLGGGMHKSGSSSSLMTDSFLPKVLKSHVALDAQSISCGTNYAV 317

Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
           LVTKQGQ++SWGE SGG+LGHGV + V +PKLID  +GS + +  CGEFHTCAVT SGDL
Sbjct: 318 LVTKQGQLYSWGEESGGRLGHGVCSYVPHPKLIDEFDGSTVELADCGEFHTCAVTTSGDL 377

Query: 370 YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
           Y WGDG HN GLLG  S  SHW P ++ GQMEG+ + +I CGPWHTA +TSAGKLFTFGD
Sbjct: 378 YAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGINVRTISCGPWHTAFVTSAGKLFTFGD 437

Query: 430 GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
           GTFGALGHGDR ST++PREVE L   +T+  +CGVWH+AA+V V G+ S     SS KLF
Sbjct: 438 GTFGALGHGDRISTNIPREVEALNGCRTIRTACGVWHSAAVVSVFGEAS-----SSGKLF 492

Query: 490 TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
           TWGDG +G+LGHGD   R++PL V   D  SF +VACG SIT+AL+ +GQV++MG+AD  
Sbjct: 493 TWGDGDDGKLGHGDIASRLIPLSVTELDTTSFQQVACGQSITVALSMSGQVYAMGTADPS 552

Query: 550 QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           Q        + P+ IEG +   +++++ACG +HIAV++SK+EVYTWGKG+NGQLGHGD E
Sbjct: 553 Q----DDVVRAPSCIEGGLGKSFVQEVACGYHHIAVLNSKAEVYTWGKGSNGQLGHGDTE 608

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCY 669
            ++ PTLV+AL+ KQV+ VVCGSN+TA ICLHK ++  D S CSGCR+ FN+ R+ HNCY
Sbjct: 609 YRRMPTLVKALKGKQVRKVVCGSNYTATICLHKPITGTDSSRCSGCRHPFNYMRKLHNCY 668

Query: 670 NCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSES---------GSNSQIP 720
           NCG V+C  C+SKKS+  A+AP+ N+PYRVCDDC+IKL    ES          SN+ +P
Sbjct: 669 NCGSVFCNSCTSKKSLAAAMAPKTNRPYRVCDDCYIKLEGIRESLGTPANSARFSNASLP 728

Query: 721 RNSSGLFQNCKRVTEKENMNSRSATD--GQSK-PKGKSYHASPSLNGKFQWEPNSDFIKS 777
            +SS          +++ ++   + D   Q+K P  K+   +   +       N D    
Sbjct: 729 -SSSNEMDEIGTTPQRQLLHRVDSFDFFRQTKIPDLKTIGETSGTSCTSSTHSNMDI--- 784

Query: 778 NKISASPPGSRRVSRAPS---------------------------------PISR----- 799
            K S +  G RR+SR  S                                 P SR     
Sbjct: 785 -KGSFNLKGIRRLSRLTSFDSVKEEGKQRSKHCASKSDTSSLIRHSVTCGLPFSRRGSVE 843

Query: 800 ------KSSPACSITMNS--FTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQ 851
                 KSSP  S+   S   TD+ + +++ E  K++N   + E  VL+AQ+E+LT KS+
Sbjct: 844 LFPLSIKSSPVESVATTSDFTTDITDHDLLQEVPKKSNQCLSHEISVLKAQVEELTLKSK 903

Query: 852 FLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQ 891
            LE EL  TS+KL+    +A+++AEK K+++E++RSLT Q
Sbjct: 904 KLEAELGMTSKKLEVAVLMARDDAEKIKSSEEIVRSLTLQ 943


>gi|225463891|ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera]
          Length = 1129

 Score =  838 bits (2164), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/912 (49%), Positives = 602/912 (66%), Gaps = 56/912 (6%)

Query: 11  ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
           ERD EQA+  LKKG  LLKYGR+GKPKFCPFRLS+DE  LIW +   E+ LKL+ VSRII
Sbjct: 11  ERDVEQALIALKKGAQLLKYGRKGKPKFCPFRLSNDESSLIWISSSGERILKLASVSRII 70

Query: 71  PGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCK 128
           PGQRTAVFQRY +PEK+Y SFSLIY N  RSLDLICKDK EAE+W   L+ALIS     +
Sbjct: 71  PGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEAEVWIAGLKALISSGQGGR 130

Query: 129 SRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEV 188
           S+ D  S         K           DLT+    D+        +SP+  +G      
Sbjct: 131 SKIDGWSDGGLYFDDSK-----------DLTSNSPSDSSVSATRDISSPEVSVG------ 173

Query: 189 LSFTAAAKAYTRAESVSKSLNFVASGGLDDAN--SRSSTADSFRISLSSAVSSSSQGSCH 246
            +   +  +Y    SV    + VA   LD  N  ++ S +D+FR+S+SSA S+SS GS  
Sbjct: 174 FNSNTSPNSYRPENSVPPERSHVA---LDHTNMQTKGSGSDAFRVSVSSAPSTSSHGSAP 230

Query: 247 EDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSK 306
           +D D LGDV+IWGE + + L+    +        R D LLPK LES VVLD   IACG +
Sbjct: 231 DDCDALGDVYIWGEVICDNLVKVGADKNANYLTTRADLLLPKPLESNVVLDVHHIACGVR 290

Query: 307 HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
           HA LVT+QG+IF+WGE SGG+LGHGV  DV  P+L+++L  +++  VACGEFHTCAVT++
Sbjct: 291 HAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACGEFHTCAVTMA 350

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
           G+L+TWGDG HN GLLG  +++SHWIP+++SG +EGLQ++S+ CGPWHTA +T+  +LFT
Sbjct: 351 GELFTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQVASVTCGPWHTALVTTTRQLFT 410

Query: 427 FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
           FGDGTFG LGHGD+ + + PREVE+L  L+T+  +CGVWHTAA+VEV   T  S  +SS 
Sbjct: 411 FGDGTFGVLGHGDKDNVAYPREVESLSGLRTIAVACGVWHTAAVVEVI-VTQSSASVSSG 469

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           KLFTWGDG + +LGHGD EPR+ P CV    + +F KVACGHS+T+ LT +GQV +MGS 
Sbjct: 470 KLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQKVACGHSLTVGLTTSGQVCTMGST 529

Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            YGQLG+P S GK P  +E  +    +E+IACG+YH+AV++S++EVYTWGKGANG+LGHG
Sbjct: 530 VYGQLGNPQSDGKLPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHG 589

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRH 666
           D E+++TPTLVE L+D+ VK + CGSN+TAAICLHK VS A+ S CS CR  F F R+RH
Sbjct: 590 DIEDRKTPTLVETLKDRHVKYIACGSNYTAAICLHKWVSGAEQSQCSTCRQAFGFTRKRH 649

Query: 667 NCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQ---IPRNS 723
           NCYNCGLV+C  CSS+K+++ ALAP   KPYRVCD C+ KLN   E+ +N++   +PR S
Sbjct: 650 NCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDSCYTKLNKVLEAAANNRRTTVPRLS 709

Query: 724 SGLFQNCKRVTEKENMNSRSAT----------DGQSKPKGKSYH----ASPSLNGKFQWE 769
               +N  R+ + E   S+SA           D ++  +GK         PS     Q +
Sbjct: 710 G---ENKDRLDKAEIRLSKSAMPSNLDLIKQLDSKAAKQGKKADTFSLVRPSQAPLLQLK 766

Query: 770 PNSDFIKSNKISASPPGSRRV-------SRAPSPISRKSSPACSIT-MNSFTDLANSEVI 821
              D +  + +       R +       SR+ SP SRK SP  S T + + + L+ S+ I
Sbjct: 767 ---DVVLFSAVDLRRTVPRPILTPSGVSSRSVSPFSRKPSPPRSATPVPTTSGLSFSKSI 823

Query: 822 FEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAA 881
            +  K+TN+  NQE   LR Q+E L  + +  E+EL+++++K++E   +A EE+ K+KAA
Sbjct: 824 ADSLKKTNELLNQEVLKLRGQVESLRERCELQELELQKSAKKVQEAMVVATEESAKSKAA 883

Query: 882 QEVIRSLTAQAR 893
           +EVI+SLTAQ +
Sbjct: 884 KEVIKSLTAQLK 895


>gi|255570334|ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534503|gb|EEF36202.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1114

 Score =  837 bits (2163), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/922 (48%), Positives = 611/922 (66%), Gaps = 75/922 (8%)

Query: 11  ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
           ERD EQA+  LKKG  LLKYGR+GKPKFCPFRLS+DE  LIW +   E+ LKL+ VS+II
Sbjct: 11  ERDIEQALIALKKGAQLLKYGRKGKPKFCPFRLSNDETTLIWISSSGERSLKLASVSKII 70

Query: 71  PGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCK 128
           PGQRTAVFQRY +PEK+Y SFSLIY +  RSLDLICKDK EAE+W   L+ALIS     +
Sbjct: 71  PGQRTAVFQRYLRPEKDYLSFSLIYNDGKRSLDLICKDKVEAEVWIAGLKALISSGQGGR 130

Query: 129 SRSDSISS-----DSPRSHTQKNSPSHVSSISSDLTNKD-SGDTQPILVAYENSPQNRLG 182
           S+ D  S      D  R  T  ++     S++ ++++ D S    P +    + P+N   
Sbjct: 131 SKIDGWSDGGLYLDDGRDLTSNSASDSSISVTREISSPDISVSFNPNISPRSSRPEN--- 187

Query: 183 KAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQ 242
                       +    R+   S + N    G         S +D+FR+S+SSA S+SS 
Sbjct: 188 ------------SPNSDRSHVASDNTNMQVKG---------SGSDAFRVSVSSAPSTSSH 226

Query: 243 GSCHEDFDGLGDVFIWGEGLGNGL--LGGAVNGVEISSADRRDALLPKVLESTVVLDAQS 300
           GS  +D D LGDV+IWGE + +    +G   N   +S+  R D LLP+ LES VVLD   
Sbjct: 227 GSAPDDCDALGDVYIWGEVIYDNAVKIGADKNANYVST--RADVLLPRPLESNVVLDVHH 284

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           IACG +HA LVT+QG++F+WGE SGG+LGHGV  DV  P+L+++L  S +  VACGEFHT
Sbjct: 285 IACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAVSTVDFVACGEFHT 344

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           CAVT++G++YTWGDG HN GLLG  +++SHWIP+++SG +EGLQ++S+ CGPWHTA +TS
Sbjct: 345 CAVTMAGEIYTWGDGTHNAGLLGHGNDVSHWIPKRISGPLEGLQVASVTCGPWHTALVTS 404

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            G+LFTFGDGTFG LGHGDR + + PREVE+L  L+T+ A+CGVWHTAA+VEV   T  S
Sbjct: 405 TGQLFTFGDGTFGVLGHGDRENVAYPREVESLSGLRTIAAACGVWHTAAVVEVI-VTQSS 463

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
           + +SS KLFTWGDG + +LGHGD EPR+ P CV    D +F K+ACGHS+T+ LT +G V
Sbjct: 464 SSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGHV 523

Query: 541 FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
           F+MGS  YGQLG+P + GK P  +E  +    +E+IACG+YH+AV++S++EVYTWGKGAN
Sbjct: 524 FAMGSTVYGQLGNPYADGKLPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWGKGAN 583

Query: 601 GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFN 660
           G+LGHGD E+++ P LVEAL+D+ VK + CG+N+TAAICLHK VS A+ S CS CR  F 
Sbjct: 584 GRLGHGDIEDRKAPILVEALKDRHVKYIACGANYTAAICLHKLVSGAEQSQCSSCRQAFG 643

Query: 661 FRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQ-- 718
           F R+RHNCYNCGLV+C  CSS+K+ + ALAP   KPYRVCD CF+KLN  S++ ++++  
Sbjct: 644 FTRKRHNCYNCGLVHCHSCSSRKATRAALAPNPGKPYRVCDSCFVKLNKVSDASNHNRRN 703

Query: 719 -IPRNSSGLFQNCKRVTEKE----------NMNSRSATDGQSKPKGKSYHA--------S 759
            +PR S    +N  R+ + E          NM+     D ++  +GK            +
Sbjct: 704 SVPRLSG---ENKDRLDKAEIRLSKSTLPSNMDLIKQLDTKAAKQGKKADTFSLVRSSQA 760

Query: 760 PSLNGKFQWEPNSDFIKSNKISASPPGSRRV-------SRAPSPISRKSSPACSIT-MNS 811
           PSL    Q +   D + S+ I       + V       SR+ SP SR+ SP  S T + +
Sbjct: 761 PSL---LQLK---DVVFSSAIDLRAKVPKPVLTPSGVNSRSVSPFSRRPSPPRSATPVPT 814

Query: 812 FTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIA 871
            + L+ S+ + +  ++TN+  NQE   LRAQ+E L ++  F E+EL+++++K++E   +A
Sbjct: 815 TSGLSFSKSVTDSLRKTNELLNQEVIKLRAQVESLKQRCDFQELELQKSAKKVQEAMALA 874

Query: 872 QEEAEKNKAAQEVIRSLTAQAR 893
            EE+ K+KAA++VI+SLTAQ +
Sbjct: 875 AEESSKSKAAKDVIKSLTAQLK 896


>gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
          Length = 1098

 Score =  833 bits (2152), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/926 (48%), Positives = 604/926 (65%), Gaps = 64/926 (6%)

Query: 1   MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ 60
           MA        +RD +QA+  LKKG  LLKYGR+GKPKFCPFRLS+DE  LIW +   E+ 
Sbjct: 1   MADLVSYRNADRDIDQALIALKKGAQLLKYGRKGKPKFCPFRLSNDESSLIWISSSGERN 60

Query: 61  LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALR 118
           LKLS VSRIIPGQRTAVFQRY +PEK+Y SFSLIY N  RSLDLICKDK E E+W   L+
Sbjct: 61  LKLSSVSRIIPGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEVEVWIAGLK 120

Query: 119 ALISEDNRCKSRSDSISS-----DSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAY 173
           ALIS     +S+ D  S      D  R  T  +      S S DL++ D      + V+ 
Sbjct: 121 ALISSGQGGRSKIDGWSDGGLHLDDSRDLTSNSPSESSVSASRDLSSPD------VYVSL 174

Query: 174 ENSPQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISL 233
            N+  +         L+F        R+ + S   N    G         S++D FR+S+
Sbjct: 175 ANTSPHSFHS--ENTLNFE-------RSHAPSNPSNMQVKG---------SSSDVFRVSV 216

Query: 234 SSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLEST 293
           SSA S+SS GS  +D+D LGDV+IWGE +   ++           + R D LLP+ LES 
Sbjct: 217 SSAPSTSSHGSAPDDYDALGDVYIWGEVICENVVKVGAEKSASYFSPRTDILLPRPLESN 276

Query: 294 VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMV 353
           VVLD   IACG KHA LVT+QG++F+WGE SGG+LGHGV  +V  P+L++A+  + +  V
Sbjct: 277 VVLDVLQIACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVVQPRLVEAMASTTVDFV 336

Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
           ACGEFHTCAVT++G+LYTWGDG HN GLLG  +++SHWIP++++G +EGLQ++ + CGPW
Sbjct: 337 ACGEFHTCAVTMAGELYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVALVTCGPW 396

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           HTA ITS G+LFTFGDGTFG LGHGDR + S PREVE+L  L+T+  +CGVWHTAAI+EV
Sbjct: 397 HTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRTIAVACGVWHTAAIIEV 456

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
              T  S  +SS KLFTWGDG + +LGHGD + R+ P CV    + +F ++ACGHS+T+ 
Sbjct: 457 I-VTQSSASVSSGKLFTWGDGDKNRLGHGDKDARLEPTCVPSLIEDNFHRIACGHSLTVG 515

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
           LT +G+VF+MGS  YGQLG+P S GK P  +E       +E+IACG+YH+AV++SK+EV+
Sbjct: 516 LTTSGRVFTMGSTVYGQLGNPQSDGKLPCLVEDKFAGESVEEIACGAYHVAVLTSKNEVF 575

Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICS 653
           TWGKGANG+LGHGD E++++PTLVEAL+D+ VK + CGSN+++AICLHK VS A+ S CS
Sbjct: 576 TWGKGANGRLGHGDVEDRKSPTLVEALKDRHVKYIACGSNYSSAICLHKWVSGAEQSQCS 635

Query: 654 GCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSES 713
            CR  F F R+RHNCYNCGLV+C  CSS+K+++ ALAP   KPYRVCD CF+KLN  +E 
Sbjct: 636 ACRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKPYRVCDSCFVKLNKVAEL 695

Query: 714 GSNSQ---IPRNSSGLFQNCKRVTEKE----------NMNSRSATDGQSKPKGKSYHASP 760
           G+N++   +PR S    +N  R+ + E          NM+     D ++  +GK    + 
Sbjct: 696 GNNNRRNAMPRLSG---ENKDRLEKPELRLTKTAVPSNMDLIKQLDSKAAKQGKK---AD 749

Query: 761 SLNGKFQWEPNS-----DFIKSNKISASPPGSRRV-------SRAPSPISRKSSPACSIT 808
           + +     +P S     D + S  I       R V       SR+ SP SR+ SP  S T
Sbjct: 750 TFSLVRTSQPQSLLQLKDVVLSTAIDLKRTAPRPVLTSSGVSSRSVSPFSRRPSPPRSAT 809

Query: 809 -MNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKET 867
            + + + L+ S+ I +  K+TN+  NQE   LR Q+E L ++ +  E+EL+R+++K +E 
Sbjct: 810 PIPTTSGLSFSKSITDSLKKTNELLNQEVLKLRGQVETLRQRCELQELELQRSTKKAQEA 869

Query: 868 TQIAQEEAEKNKAAQEVIRSLTAQAR 893
             +A EE+ K+KAA+EVI+SLTAQ +
Sbjct: 870 MAVAAEESAKSKAAKEVIKSLTAQLK 895


>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
 gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
          Length = 1120

 Score =  830 bits (2143), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/922 (49%), Positives = 603/922 (65%), Gaps = 75/922 (8%)

Query: 11  ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
           +RD EQA+  LKKG  LLKYGR+GKPKFCPFRLSSDE  LIW + K E+ LKL+ +SRII
Sbjct: 11  DRDIEQALIALKKGAQLLKYGRKGKPKFCPFRLSSDESSLIWISSKGERSLKLASISRII 70

Query: 71  PGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCK 128
           PGQRTAVF+RY +PEK+Y SFSLIY N  RSLDLICKDK EAE W + L+ALI+     +
Sbjct: 71  PGQRTAVFERYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEAEAWISGLKALIASGQGGR 130

Query: 129 SRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYE-------NSPQNRL 181
           S+ D  S             S+  S SS   N+D+   +   V+Y        + P+N +
Sbjct: 131 SKIDGWSDGGLYLDEGCELTSNSPSDSSHSVNRDNSSPE-FFVSYNANISLKTSQPENNI 189

Query: 182 GKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSS 241
            K                  E    SLN        +   + S++D  R+S+SSA S+SS
Sbjct: 190 AKL-----------------ERAHVSLNQT------NMQVKGSSSDVMRVSVSSAPSTSS 226

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGL--LGGAVNGVEISSADRRDALLPKVLESTVVLDAQ 299
            GS  +D D LGDV+IWGE +G+ +  +G   N   ++   R D LLP+ LES +VLD  
Sbjct: 227 HGSAPDDCDALGDVYIWGEIVGDNIVKIGAEKNSSYVTL--RTDVLLPRPLESNIVLDIH 284

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
            IACG +HA LVT+QG++F+WGE SGG+LGHGV  DV  P+++++L  S+I  VACGEFH
Sbjct: 285 HIACGVRHAALVTRQGEVFTWGEESGGRLGHGVVKDVIQPRMVESLAASSIGFVACGEFH 344

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           TCAVT++G+LYTWGDG HN GLLG  S++SHWIP++VSG +EGLQ++S+ CGPWHTA +T
Sbjct: 345 TCAVTITGELYTWGDGTHNAGLLGHGSDVSHWIPKRVSGPLEGLQVTSVTCGPWHTALVT 404

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
           S G+LFTFGDGTFGALGHGDR + S P+EVE+L  L+T+  +CGVWHTAA+VEV   T  
Sbjct: 405 SMGQLFTFGDGTFGALGHGDRENISYPKEVESLSGLRTIAVACGVWHTAAVVEVI-VTQS 463

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
           S+ +SS KLFTWGDG + +LGHGD EPR+ P CV    D  F KVACGHSIT+ LT +GQ
Sbjct: 464 SSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYDFHKVACGHSITVGLTTSGQ 523

Query: 540 VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
           VFSMGS  YGQLG+P + GK P  +E  +    +E+++CG+YH+ V++SK+EVYTWGKGA
Sbjct: 524 VFSMGSTVYGQLGNPSADGKIPCLVEDKLFGESVEEVSCGAYHVVVLTSKNEVYTWGKGA 583

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQF 659
           NG+LGHGD E+++TPTLVEAL+D+ VK + CGSN+TAAICLHK VS A+ S CS CR  F
Sbjct: 584 NGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYTAAICLHKWVSSAEQSQCSACRQAF 643

Query: 660 NFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQ- 718
            F R+RHNCYNCGLV+C  CSS+K+++ ALAP   K YRVCD C+ KL   +E+ +N++ 
Sbjct: 644 GFTRKRHNCYNCGLVHCHSCSSRKALRAALAPNPGKLYRVCDSCYTKLMKAAEAINNNRK 703

Query: 719 --IPRNSSGLFQNCKRVTEKE---------NMNSRSATDGQSKPKGKSYHA--------S 759
             +PR S    +N  R+ + +         N++     D ++  +GK            +
Sbjct: 704 NAMPRLSG---ENKDRIDKTDMKISKSVPSNLDLIKQLDNKAAKQGKKADTFSLVRSSQA 760

Query: 760 PSLNGKFQWEPNSDFIKSNKISASPPGSRRV-------SRAPSPISRKSSPACSIT-MNS 811
           PSL    Q     D + S  +       + V       SR+ SP SRK SP  S T + +
Sbjct: 761 PSL---LQLR---DVVLSTAVDLRRTAPKPVLTASGVSSRSVSPFSRKPSPPRSATPVPT 814

Query: 812 FTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIA 871
            + L+ S+ I +  K+TND  N E   LR+Q+E L +K +  E EL+++ +K +E   +A
Sbjct: 815 ASGLSFSKSITDSLKKTNDLLNHEVLKLRSQVESLRQKCELQEQELQKSLKKTREAMALA 874

Query: 872 QEEAEKNKAAQEVIRSLTAQAR 893
            EE+ K+KAA+EVI+ LTAQ +
Sbjct: 875 AEESGKSKAAKEVIKLLTAQLK 896


>gi|356499563|ref|XP_003518608.1| PREDICTED: uncharacterized protein LOC100805364 [Glycine max]
          Length = 1120

 Score =  829 bits (2141), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/911 (50%), Positives = 599/911 (65%), Gaps = 57/911 (6%)

Query: 12  RDTEQ-AVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
           RD EQ A+  LKKG  LLKYGR+GKPKFCPFRLS+DE  LIW     E+ LKLS VSRII
Sbjct: 12  RDIEQQALIALKKGAQLLKYGRKGKPKFCPFRLSNDESSLIWITSSGERNLKLSSVSRII 71

Query: 71  PGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCK 128
           PGQRTAVFQRY +PEK+Y SFSLIY N  RSLDLICKDK EAE+W   L+ALIS     +
Sbjct: 72  PGQRTAVFQRYLRPEKDYLSFSLIYSNGKRSLDLICKDKAEAEVWIAGLKALISSGQGGR 131

Query: 129 SRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEV 188
           S+ D  S               + + S DLT+    ++        +SP        S  
Sbjct: 132 SKIDGWSDGG-----------LILNDSRDLTSNSPSESSASTSRGISSPD------ISST 174

Query: 189 LSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHED 248
           L  T+  K+Y    ++S+  +  AS    +   + S +D FR+S+SSA S+SS GS  +D
Sbjct: 175 LPNTSP-KSYRPDNTISERSH--ASPDPTNMQVKGSASDVFRVSVSSAPSTSSHGSAPDD 231

Query: 249 FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           +D L DV+IWGE     +  GA   V   S  R D LLP+ LES VVLD   IACG +HA
Sbjct: 232 YDALWDVYIWGEVTCENVKVGADKNVNYFSP-RADVLLPRPLESNVVLDVHHIACGVRHA 290

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
            LVT+QG++F+WGE SGG+LGHGV  +V  P+L++AL  + I  VACGEFH+CAVT++G+
Sbjct: 291 SLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVEALISTTIDFVACGEFHSCAVTMAGE 350

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           LYTWGDG+HN GLLG  S +SHWIP++++G +EGLQI+ + CGPWHTA ITS G+LFTFG
Sbjct: 351 LYTWGDGMHNAGLLGHGSNVSHWIPKRIAGPLEGLQIAFVACGPWHTALITSTGQLFTFG 410

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           DGTFG LGHGDR + S PREVE+L  L+T+  +CGVWHTAA+VEV    SG++ +SS KL
Sbjct: 411 DGTFGVLGHGDRQNVSYPREVESLLGLRTIAVACGVWHTAAVVEVIATHSGTS-ISSGKL 469

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           FTWGDG + +LGHGD E R+ P CV    D +F K+ACGHS+T+ LT +G+VF+MGS  Y
Sbjct: 470 FTWGDGDKNRLGHGDKEARLKPTCVSALIDYNFHKIACGHSLTVGLTTSGRVFTMGSTVY 529

Query: 549 GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           GQLGS  S GK P  +   I    IE+IACG+YH+AV++SK+EVYTWGKGANG+LGHGD 
Sbjct: 530 GQLGSSLSDGKVPCLVGDKIAGESIEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDI 589

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNC 668
           E+++TP LVEAL+D+ VK + CGSN++AAICLHK VS A+ S CS CR  F F R+RHNC
Sbjct: 590 EDRKTPALVEALKDRHVKYIACGSNYSAAICLHKWVSGAEQSQCSTCRQAFGFTRKRHNC 649

Query: 669 YNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSE---SGSNSQIPR---- 721
           YNCGLV+C  CSS+K+++ A AP   KPYRVCD C+ KLN  +E   S   + +PR    
Sbjct: 650 YNCGLVHCHSCSSRKALRAAHAPNPGKPYRVCDSCYAKLNKVAEACNSNRRNALPRLSGE 709

Query: 722 NSSGLFQNCKRVTE---KENMNSRSATDGQSKPKGKSYHA--------SPSLNGKFQWEP 770
           N   L ++  R+++     NM+     D ++  +GK             PSL    Q + 
Sbjct: 710 NKDRLDKSDLRLSKAVIPSNMDLIKQLDSKAAKQGKKGDTFSLIRPSQPPSL---LQLK- 765

Query: 771 NSDFIKSNKISASPPGSRRV-------SRAPSPISRKSSPACSIT-MNSFTDLANSEVIF 822
             D + S  +       R V       SR+ SP SR+SSP  S T + + + L+ S+ I 
Sbjct: 766 --DVVLSTALDLRRTVPRPVVAPSGVSSRSVSPFSRRSSPPRSATPIPTTSGLSFSKSIS 823

Query: 823 EYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQ 882
           +  K+TN+  NQE   L AQ+E L ++ +  E+EL+R+++K +E T +A EE+ K+KAA+
Sbjct: 824 DSLKKTNELLNQEVQKLHAQVESLRQRCELQELELQRSAKKTQEATALAAEESGKSKAAK 883

Query: 883 EVIRSLTAQAR 893
           EVI+SLTAQ +
Sbjct: 884 EVIKSLTAQLK 894


>gi|356559685|ref|XP_003548128.1| PREDICTED: uncharacterized protein LOC100813700 [Glycine max]
          Length = 1120

 Score =  828 bits (2138), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/916 (49%), Positives = 594/916 (64%), Gaps = 67/916 (7%)

Query: 12  RDTEQAVRV-LKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
           RD EQ V + LKKG  LLKYGR+GKPKFCPFRLS DE  LIW     E+ LKLS VSRII
Sbjct: 12  RDIEQQVLIALKKGAQLLKYGRKGKPKFCPFRLSHDESSLIWITSSGERNLKLSSVSRII 71

Query: 71  PGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCK 128
           PGQRTAVFQRY +PEK+Y SFSLIY N  RSLDLIC+DK EAE+W   L+ALI+     +
Sbjct: 72  PGQRTAVFQRYLRPEKDYLSFSLIYSNGKRSLDLICRDKVEAEVWIAGLKALIASGQGGR 131

Query: 129 SRSDSISS-----DSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           S+ D  S      +  R  T  N    ++S S  + + D   T P       SP+     
Sbjct: 132 SKIDGWSDGGLILNDSRDLTSNNPSVSLASTSRGICSPDISVTLP-----NTSPK----- 181

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQG 243
                 SF +      R+ +     N    G         S +D FR+S+SSA S+SS G
Sbjct: 182 ------SFRSDNTISERSHAPPDPTNMQVKG---------SASDVFRVSVSSAPSTSSHG 226

Query: 244 SCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIAC 303
           S  +D D LGDV+IWGE     +  GA   V   S  R D LLP+ LES+VVLD   IAC
Sbjct: 227 SAPDDCDALGDVYIWGEVTCENVKVGADKNVNYVSP-RADVLLPRPLESSVVLDVHHIAC 285

Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAV 363
           G +HA LVT+QG++F+WGE SGG LGHGV  +V  P+L++AL  + +  VACGEFH+CAV
Sbjct: 286 GVRHASLVTRQGEVFTWGEESGGCLGHGVGKNVVQPRLVEALTSTTVDFVACGEFHSCAV 345

Query: 364 TLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGK 423
           T++G+LYTWGDG HN GLLG  S++SHWIP++++G +EGLQI+ + CGPWHTA +TS G+
Sbjct: 346 TMAGELYTWGDGTHNAGLLGHGSDVSHWIPKRIAGPLEGLQIAFVACGPWHTALVTSTGQ 405

Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
           LFTFGDGTFG LGHGDR + S PREVE+L  L+T+  +CGVWHTAA+VEV   T  S  +
Sbjct: 406 LFTFGDGTFGVLGHGDRQNVSYPREVESLLGLRTIAVACGVWHTAAVVEVIA-THSSTSI 464

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
           SS KLFTWGDG + +LGHGD E R+ P CV    D +F K+ACGHS+T  LT +G+VF+M
Sbjct: 465 SSGKLFTWGDGDKNRLGHGDKEARLKPTCVAALIDSNFHKIACGHSLTAGLTKSGRVFTM 524

Query: 544 GSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           GS  YGQLG+P S GK P  +   I    IE+IACG+YH+AV++SK+EVYTWGKGANG+L
Sbjct: 525 GSTVYGQLGNPQSDGKVPCLVGDKIARESIEEIACGAYHVAVLTSKNEVYTWGKGANGRL 584

Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRR 663
           GHGD E+++TP LVEAL+D+ VK + CGSN++AAICLHK VS A+ S CS CR  F F R
Sbjct: 585 GHGDIEDRKTPALVEALKDRHVKYIACGSNYSAAICLHKWVSGAEQSQCSTCRQAFGFTR 644

Query: 664 RRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQ---IP 720
           +RHNCYNCGLV+C  CSS+K+++ A AP   KPYRVCD C+ KLN  +E+ ++++   +P
Sbjct: 645 KRHNCYNCGLVHCHSCSSRKALRAAHAPNPGKPYRVCDSCYAKLNKVAEASNSNRRNALP 704

Query: 721 R----NSSGLFQNCKRVTE---KENMNSRSATDGQSKPKGKS------YHAS--PSLNGK 765
           R    N   L ++  R+++     NM+     D ++  +GK        H S  PSL   
Sbjct: 705 RLSGENKDRLDKSDLRLSKAVIHSNMDLIKQLDSKAAKQGKKGDTFSLVHPSQPPSL--- 761

Query: 766 FQWEPNSDFIKSNKISASPPGSRRV-------SRAPSPISRKSSPACSIT-MNSFTDLAN 817
            Q +   D + S+ +       R V       SR+ SP SR+ SP  S T + + + LA 
Sbjct: 762 LQLK---DVVLSSALDLRRTVPRPVVAPSGVSSRSVSPFSRRPSPPRSATPIPTTSGLAF 818

Query: 818 SEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEK 877
           S+ I +  K+TN+  NQE   L AQ+E L ++ +  E+EL+R+++  +E   +A EE+ K
Sbjct: 819 SKSISDSLKKTNELLNQEVQKLHAQVESLRQRCELQELELQRSAKNTQEAMALAAEESAK 878

Query: 878 NKAAQEVIRSLTAQAR 893
            KAA+EVI+SLTAQ +
Sbjct: 879 CKAAKEVIKSLTAQLK 894


>gi|224062918|ref|XP_002300931.1| predicted protein [Populus trichocarpa]
 gi|222842657|gb|EEE80204.1| predicted protein [Populus trichocarpa]
          Length = 1114

 Score =  826 bits (2133), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/923 (48%), Positives = 611/923 (66%), Gaps = 77/923 (8%)

Query: 11  ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
           ERD EQA+  LKKG+ LLKYGR+GKPKFCPFRLS+DE  LIW +   E+ LKL+ VS+II
Sbjct: 11  ERDIEQALIALKKGSQLLKYGRKGKPKFCPFRLSNDETTLIWISSSGERSLKLASVSKII 70

Query: 71  PGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCK 128
           PGQRTAVFQRY +PEK+Y SFSLIY N  RSLDLICKDK EAE+W   L+ALI      +
Sbjct: 71  PGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEAEVWIAGLKALIISGQGGR 130

Query: 129 SRSDSISS-----DSPRSHTQKNSPSHVSSISSDLTNKD-----SGDTQPILVAYENSPQ 178
           S+ D  S      D  R  T  ++     SIS D+++ +     + +T P     E+SP 
Sbjct: 131 SKIDGWSDGGLYLDDGRDLTPNSASDSSVSISRDISSPEVSVNFNPNTSPKNFQLESSPH 190

Query: 179 NRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVS 238
           +                    R+   S++ N    G         S +D+FR+S+SSA S
Sbjct: 191 S-------------------DRSHVASENTNMQVKG---------SGSDAFRVSVSSAPS 222

Query: 239 SSSQGSCHEDFDGLGDVFIWGEGLGNGLL--GGAVNGVEISSADRRDALLPKVLESTVVL 296
           +SS GS  +D D LGDV++WGE + +  +  G   N   +S+  R D LLP+ LES VVL
Sbjct: 223 TSSHGSAPDDCDALGDVYVWGEIICDNAVKVGADKNATYLST--RADVLLPRPLESNVVL 280

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG 356
           D   IACG +HA +VT+QG++F+WGE SGG+LGHGV  DV  P+L+++L  + +  +ACG
Sbjct: 281 DVHHIACGFRHAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAMTTVDFIACG 340

Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
           EFHTCAVT++G++YTWGDG+H  GLLG  ++ISHWIP+++SG +EGLQ++S+ CGPWHTA
Sbjct: 341 EFHTCAVTMAGEIYTWGDGMHYAGLLGHGTDISHWIPKRISGPLEGLQVASVTCGPWHTA 400

Query: 417 AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
            +TS G+LFTFGDGTFG LGHG+R + + P+EVE+L  L+T+  +CGVWHTAA+VEV   
Sbjct: 401 LVTSTGQLFTFGDGTFGVLGHGNRENIAYPKEVESLAGLRTIAVACGVWHTAAVVEVI-V 459

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           T  S+ +SS KLFTWGDG + +LGHGD EPR+ P CV    D +F K+ACGHS+T+ LT 
Sbjct: 460 TQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDFNFHKIACGHSLTVGLTT 519

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           +G VF+MGS  YGQLG+P + GK P  +E  +    +E+IACG+YH+AV++S++EVYTWG
Sbjct: 520 SGHVFTMGSTVYGQLGNPYADGKVPCLVEDKLSGESVEEIACGAYHVAVLTSRNEVYTWG 579

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCR 656
           KGANG+LGHGD E+++TPTLVEAL+DK VK + CG+N++AAICLHK VS ++ S CS CR
Sbjct: 580 KGANGRLGHGDGEDRKTPTLVEALKDKHVKYIACGANYSAAICLHKWVSGSEQSQCSSCR 639

Query: 657 NQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSN 716
             F F R+RHNCYNCGLV+C  CSS+K+ + ALAP  +KPYRVCD CF KLN  S++ + 
Sbjct: 640 QAFGFTRKRHNCYNCGLVHCHSCSSRKATRAALAPNPSKPYRVCDSCFTKLNKVSDASNT 699

Query: 717 SQI---PR----NSSGLFQ---NCKRVTEKENMNSRSATDGQSKPKGKSYHA-------- 758
           ++    PR    N   L +      ++T   N++     D ++  +GK            
Sbjct: 700 NRRNAGPRLSGENKDRLDKADLRLSKLTLPSNLDLIKQLDSKAAKQGKKADTFSLVWSSQ 759

Query: 759 SPSLNGKFQWEPNSDFIKSNKISASPPGSRRV-------SRAPSPISRKSSPACSIT-MN 810
           +PSL    Q +   D + S+ I   P   + V       SR+ SP SR+ SP  S T + 
Sbjct: 760 APSL---LQLK---DVVLSSTIDLRPKVPKPVLTPSGVSSRSVSPFSRRPSPPRSATPVP 813

Query: 811 SFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQI 870
           + + L+ S+ I +  K+TN+  NQE   LR Q+E L ++ +F E EL+++++K++E   +
Sbjct: 814 TTSGLSFSKSIADSLKKTNELLNQEVLKLRTQVESLRQRCEFQESELQKSAKKVQEAMAV 873

Query: 871 AQEEAEKNKAAQEVIRSLTAQAR 893
           A EE+ K+KAA++V++SLTAQ +
Sbjct: 874 AAEESAKSKAAKDVMKSLTAQLK 896


>gi|449443826|ref|XP_004139677.1| PREDICTED: uncharacterized protein LOC101214149 [Cucumis sativus]
          Length = 1118

 Score =  823 bits (2127), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/905 (50%), Positives = 606/905 (66%), Gaps = 48/905 (5%)

Query: 12  RDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIP 71
           RDTEQA+  LKKG+ LLKYGR+GKPKFCPFRLS+DE  LIW +   EK LKL+ VSRIIP
Sbjct: 12  RDTEQALIALKKGSQLLKYGRKGKPKFCPFRLSNDELSLIWISTTGEKSLKLASVSRIIP 71

Query: 72  GQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCKS 129
           GQRTAVFQRY +PEK+Y SFSLIY N  RSLDLICKDK EAE+W   L+ALI   +  +S
Sbjct: 72  GQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEAEIWIAGLKALIGSGDGGRS 131

Query: 130 RSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVL 189
           + D  S                   +SDLT+    D+   +    +SP+  +   FS   
Sbjct: 132 KIDGWSDGG-----------LYQDDNSDLTSSSPSDSYNSVARDISSPE--VCTTFSPNK 178

Query: 190 SFTAA-AKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHED 248
           S T+  ++  TR+       N  A G         S++D FR+S+SSA SSSS GS  +D
Sbjct: 179 SPTSVRSENSTRSHVPINQTNMQAKG---------SSSDIFRVSVSSAPSSSSHGSTPDD 229

Query: 249 FDGLGDVFIWGEGLGNGLLG-GAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
            D LGD+F+WGE + +  +  GA     +SS  R D LLPK LES +VLDAQ IACG +H
Sbjct: 230 CDALGDIFVWGEVISDNFMKPGADRASNVSS--RTDVLLPKPLESNIVLDAQHIACGVRH 287

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
           + +VT+QG++F+WGE +GG+LG G+  DV+ P+L++AL  + + +VACGEFHTCAVT+ G
Sbjct: 288 SAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTMDG 347

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           +LYTWGDG+HN GLLG  +++SHW+P+++SG +EGLQ++ + CGPWHTA I+S G+LFTF
Sbjct: 348 ELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALISSTGQLFTF 407

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           GDGTFG LGHGD+ S S PREV++L  L+T+  +CGVWHTAA+VEV   T  S  + S K
Sbjct: 408 GDGTFGVLGHGDKKSISYPREVDSLTGLRTIAVACGVWHTAAVVEVI-MTQSSTSIPSGK 466

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           LFTWGDG + +LGHGD EPR+ P CV    D +F K+ACGHSITI LT +GQVF++GS+ 
Sbjct: 467 LFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVGSSV 526

Query: 548 YGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
           YGQLG+P + GK P  +E  +     E++ACG+YH+ V++SK+EVYTWGKGANG+LGHGD
Sbjct: 527 YGQLGNPHADGKQPCLVEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLGHGD 586

Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHN 667
            E++++PTLVE+L+DK VK + CGSN++AAICLHK +S  + S CS CR  F F R+RHN
Sbjct: 587 VEDRKSPTLVESLKDKHVKIIACGSNYSAAICLHKSLSGTEQSQCSACRQAFGFTRKRHN 646

Query: 668 CYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSN---SQIPR--- 721
           CYNCGLV+C  CSSKK+++ ALAP   K YRVCD C+ KL+  SESGSN   + +PR   
Sbjct: 647 CYNCGLVHCHSCSSKKALRAALAPTPRKSYRVCDSCYAKLSKVSESGSNYRKNAVPRLSG 706

Query: 722 -NSSGLFQNCKRV--TEKENMNSRSATDGQSKPKGK---------SYHASPSLNGKFQWE 769
            N   L ++  R   T   NM+     D ++  +GK            A   L  K    
Sbjct: 707 ENRDKLDKSDTRPPKTALSNMDLIKQLDSKAAKQGKRTDTFAVVRPTQAHSLLQLKDGPI 766

Query: 770 PNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSIT-MNSFTDLANSEVIFEYSKQT 828
           PN+  I+       P  +   SR+ SP+SR+SSP  S T + + + L+ S+ I +  K+T
Sbjct: 767 PNTVDIRRLAPKPIPMANGVNSRSVSPLSRRSSPPRSGTPVPTASGLSFSKGIADSLKKT 826

Query: 829 NDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSL 888
           N+  NQE  +LRAQ+E L ++ +  E+EL ++ +K +E   +A EE+ K+KAA+EVI SL
Sbjct: 827 NELLNQEVLMLRAQVESLRKRCELQELELRKSEKKTEEAIAVAAEESAKSKAAKEVITSL 886

Query: 889 TAQAR 893
           TAQ +
Sbjct: 887 TAQIK 891


>gi|168035996|ref|XP_001770494.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678202|gb|EDQ64663.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1125

 Score =  823 bits (2126), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 482/956 (50%), Positives = 629/956 (65%), Gaps = 69/956 (7%)

Query: 1   MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ 60
           MA   ++ ++ERD EQA+  LKKG  LLKYGRRGKPKFCPF+LSSDE  LIWY+G EEK+
Sbjct: 1   MADQSRHGVLERDIEQAITALKKGAQLLKYGRRGKPKFCPFKLSSDENALIWYSGGEEKR 60

Query: 61  LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALR 118
           L LS VSRII GQRT VF RYP+PEKE QSFSLI+ N  RSLDL   DKDEAE+WF  L+
Sbjct: 61  LWLSTVSRIITGQRTPVFLRYPRPEKECQSFSLIHANEERSLDL---DKDEAEVWFVGLK 117

Query: 119 ALISEDNRCKSRSDSISSD------SPRSHTQKNSPSHVSSISSDLTNKDSGD---TQPI 169
           A ++     KS+  ++  D      SP + T+ +SP      S+D  N++SGD       
Sbjct: 118 ASVAGAQLRKSKLHTLRHDGSVENISP-AVTRHSSPLTSPFGSTDNLNQESGDFFKNSSF 176

Query: 170 LVAYENSPQNRLGKAFSEVLS---FTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTA 226
           + +   S +  LG + S V +   + A +   +     S   +   S  L    +  S  
Sbjct: 177 IGSPLRSEKGYLGGSLSTVETKNNYDAGSVGGSMHSGSSSMGSDSVSAQLRLVGAGQS-- 234

Query: 227 DSFRISLSSAVSSSSQGSCH-ED----FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADR 281
           D++RIS+SSAVSSSSQ S H ED     + LGDV++WGEG+G+G+LGG    +    A  
Sbjct: 235 DNYRISMSSAVSSSSQSSQHGEDGSHHAEALGDVYMWGEGVGDGILGGGSVRIGAGGAMN 294

Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL 341
            DA LPK LES +VLD Q +ACG KHA LVTKQG++F+WGE SGG+LGHGV+ DVS+P+L
Sbjct: 295 LDAPLPKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQL 354

Query: 342 IDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQME 401
           ++AL  S   +VACGE+H CAVTLSGDLYTWGDG H+LGLLG  ++ISHWIP++V+G +E
Sbjct: 355 VEALASSTTEVVACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLE 414

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
            ++++SI CGPWHTA +T+AG+LFTFGDGTFG LGH DR S   PREVE+LK L+TV A+
Sbjct: 415 EVRVASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAA 474

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
           CGVWHTAA+VEV   +S ++  SS KLFTWGDG +G+LGHGD E R+VP CV    D +F
Sbjct: 475 CGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDHNF 534

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
            KVACGHS+T+ALT  G+VF+MGS+ +GQLG P + GK P  +EG +   Y+EDIACG++
Sbjct: 535 RKVACGHSLTVALTTKGEVFTMGSSMFGQLGDPQADGKLPGMVEGRLVDAYVEDIACGAH 594

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
           H+A V+ KSEVYTWGKGANG+LGHGD E++ TPTLVEAL++KQVKS+ CG+ FTAA+CLH
Sbjct: 595 HVACVTLKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGATFTAAVCLH 654

Query: 642 KGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCD 701
           K +S AD + CSGCR  F+F R+RHNCYNCGLV+C  CSSKK++K +LAP   KPYRVCD
Sbjct: 655 KWLSGADQNACSGCRQPFSFTRKRHNCYNCGLVFCHACSSKKALKASLAPNPGKPYRVCD 714

Query: 702 DCFIKLNTTSESG-------SNSQIPRNSSGL------FQNCKRVTEKENMNS------- 741
            C +KL   SE G       S    P  + G+       +   RV   +  N+       
Sbjct: 715 PCCVKLRKASEGGVGAGASLSKRGAPSRNRGMEVKEGSGKGEFRVPRPQAPNAGRPPITL 774

Query: 742 --RSATDGQ------SKPKGKSYHASPSLNGK--------------FQWEPNSDFIKSN- 778
               A +G+       KP+  S   SP  NG               F   P    +    
Sbjct: 775 EFGKAGEGKLGMKRGKKPENSSSRVSPVPNGTSGGSTWGAVSVPAGFSKPPFQPSLNGPL 834

Query: 779 KISASPPGSRRVSRAPSPISRKSSPACSITMNSF-TDLANSEVIFEYSKQTNDNFNQEPD 837
            IS+S    R VSRA SP+SR++SP  S T     + LA  + + E  K+TND  + E  
Sbjct: 835 AISSSVVSGRAVSRAVSPLSRRTSPPRSTTPTPTGSGLAIPKTVVEDLKKTNDTLSDENI 894

Query: 838 VLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
            LR+Q+E L R+ Q  E E++R++++L+    +A EEA K++AA+EVI+SLT+Q +
Sbjct: 895 QLRSQVESLARQLQNYEKEIQRSAQQLQNAIALATEEAAKSRAAKEVIKSLTSQLK 950


>gi|18411298|ref|NP_565144.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
 gi|15811367|gb|AAL08940.1| zinc finger protein [Arabidopsis thaliana]
 gi|332197787|gb|AEE35908.1| regulator of chromosome condensation and FYVE zinc finger
           domain-containing protein [Arabidopsis thaliana]
          Length = 1103

 Score =  813 bits (2100), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/926 (47%), Positives = 604/926 (65%), Gaps = 60/926 (6%)

Query: 1   MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ 60
           MA        + + EQA+  LKKGT LLKYGR+GKPKF PFRLSSDEK LIW +   EK+
Sbjct: 1   MADLVTYSNADHNLEQALITLKKGTQLLKYGRKGKPKFYPFRLSSDEKSLIWISSSGEKR 60

Query: 61  LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIY--RNRSLDLICKDKDEAELWFTALR 118
           LKL+ VS+I+PGQRTAVFQRY +PEK+Y SFSL+Y  + +SLDLICKDK EAE+W   L+
Sbjct: 61  LKLASVSKIVPGQRTAVFQRYLRPEKDYLSFSLLYNGKKKSLDLICKDKVEAEIWIGGLK 120

Query: 119 ALISEDNRCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQ 178
            LIS     +S+ D  S                  +S D + + +  +     A  +   
Sbjct: 121 TLISTGQGGRSKIDGWSG---------------GGLSVDASRELTSSSPSSSSASASRGH 165

Query: 179 NRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDAN--SRSSTADSFRISLSSA 236
           +  G  F+ +   T+   A           + VA   LD+ N  ++ S +D FR+S+SSA
Sbjct: 166 SSPGTPFN-IDPITSPKSAEPEVPPTDSEKSHVA---LDNKNMQTKVSGSDGFRVSVSSA 221

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
            SSSS GS  +D D LGDV+IWGE + + ++   ++        R D L+PK LES +VL
Sbjct: 222 QSSSSHGSAADDSDALGDVYIWGEVICDNVVKVGIDKNASYLTTRTDVLVPKPLESNIVL 281

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG-SNIHMVAC 355
           D   IACG +HA  VT+QG+IF+WGE SGG+LGHG+  DV +P+L+++L   S++  VAC
Sbjct: 282 DVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVAC 341

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
           GEFHTCAVTL+G+LYTWGDG HN+GLLG  S+ISHWIP++++G +EGL ++S+ CGPWHT
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 401

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A ITS G+LFTFGDGTFG LGHGD+ +   PREVE+L  L+T+  SCGVWHTAA+VE+  
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIV 461

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             S S+ +SS KLFTWGDG + +LGHGD +PR+ P CV    D +F K+ACGHS+T+ LT
Sbjct: 462 TQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLT 521

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
            +GQVF+MGS  YGQLG+  + GK P  +E  +   ++E+I+CG+YH+A ++S++EVYTW
Sbjct: 522 TSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTW 581

Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGC 655
           GKGANG+LGHGD E+++ PT+VEAL+D+ VK + CGSN+TAAICLHK VS A+ S CS C
Sbjct: 582 GKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICLHKWVSGAEQSQCSTC 641

Query: 656 RNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSE--- 712
           R  F F R+RHNCYNCGLV+C  CSSKK+ + ALAP   + YRVCD C++KL+  SE   
Sbjct: 642 RLAFGFTRKRHNCYNCGLVHCHSCSSKKAFRAALAPSAGRLYRVCDSCYVKLSKVSEIND 701

Query: 713 -SGSNSQIPRNSSGLFQNCKRVTEKE---------NMNSRSATDGQSKPKGK-----SYH 757
            +  NS +PR S    +N  R+ + E         NM+     D ++  +GK     S  
Sbjct: 702 TNRRNSAVPRLSG---ENRDRLDKSEIRLAKFGTSNMDLIKQLDSKAAKQGKKTDTFSLG 758

Query: 758 ASPSLNGKFQWEPNSDFIKSN---------KISASPPGSRRVSRAPSPISRKSSPACSIT 808
            +  L    Q +   D ++SN         K++ +P G    SR+ SP SR+SSP  S T
Sbjct: 759 RNSQLPSLLQLK---DAVQSNIGDMRRATPKLAQAPSGIS--SRSVSPFSRRSSPPRSAT 813

Query: 809 -MNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKET 867
            M S + L     I +  K+TN+  NQE   LR Q++ LT+K +F EVEL+ + +K +E 
Sbjct: 814 PMPSTSGLYFPVGIADNMKKTNEILNQEIVKLRTQVDSLTQKCEFQEVELQNSVKKTQEA 873

Query: 868 TQIAQEEAEKNKAAQEVIRSLTAQAR 893
             +A+EE+ K++AA+E I+SL AQ +
Sbjct: 874 LALAEEESAKSRAAKEAIKSLIAQLK 899


>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
 gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1073

 Score =  813 bits (2099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/912 (49%), Positives = 592/912 (64%), Gaps = 62/912 (6%)

Query: 16  QAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPGQRT 75
           QA+  LKKG  LLKYGR+GKPKFCPFRLS+DE  LIW +   EK+LKL+ VS+I+PGQRT
Sbjct: 11  QALIALKKGAQLLKYGRKGKPKFCPFRLSNDETSLIWISNGGEKRLKLATVSKIVPGQRT 70

Query: 76  AVFQRYPQPEKEYQSFSLIY--RNRSLDLICKDKDEAELWFTALRALISED---NRCKSR 130
           AVFQRY +P+K+Y SFSLIY  R R+LDLICKDK EAE+W   L+ALIS     ++    
Sbjct: 71  AVFQRYLRPDKDYLSFSLIYSNRKRTLDLICKDKVEAEVWIAGLKALISGQAGRSKIDGW 130

Query: 131 SDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLS 190
           SD   S +       +SP++ S  +S   N              +SP N           
Sbjct: 131 SDGGLSIADSRDLTLSSPTNSSVCASRDFN------------IADSPYNS---------- 168

Query: 191 FTAAAKAYTRAESVSKSLNFVASGGLDDANS--RSSTADSFRISLSSAVSSSSQGSCHED 248
            T   +      SVS   + VAS   D  N   R + +D+FR+S+SS  SSSS GS  +D
Sbjct: 169 -TNFPRTSRTENSVSSERSHVAS---DSPNMLVRGTGSDAFRVSVSSVQSSSSHGSAPDD 224

Query: 249 FDGLGDVFIWGEGLGNGL--LGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSK 306
            D LGDV+IWGE L   +   G   N   + S  R D L+PK LES VVLD   IACG K
Sbjct: 225 CDALGDVYIWGEVLCENVTKFGADKNIGYLGS--RSDVLIPKPLESNVVLDVHHIACGVK 282

Query: 307 HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
           HA LV++QG++F+WGE SGG+LGHG+  DV+ P+LI++L  ++I  VACGEFHTCAVT++
Sbjct: 283 HAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTCAVTMT 342

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
           G++YTWGDG HN GLLG  +++SHWIP+++SG +EGLQI+S+ CGPWHTA ITS G+LFT
Sbjct: 343 GEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFT 402

Query: 427 FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
           FGDGTFG LGHGD+ +   PREVE+L  L+T+  +CGVWH AAIVEV   T  S+ +SS 
Sbjct: 403 FGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVI-VTHSSSSVSSG 461

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           KLFTWGDG + +LGHGD EPR+ P CV    D +F +VACGHS+T+ LT +G+V++MGS 
Sbjct: 462 KLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKVYTMGST 521

Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            YGQLG+P + GK P  +E  +    +E+IACG+YH+AV++S++EV+TWGKGANG+LGHG
Sbjct: 522 VYGQLGNPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTSRNEVFTWGKGANGRLGHG 581

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRH 666
           D E+++ PTLV+AL+++ VK++ CGSNFTAAICLHK VS  + S CS CR  F F R+RH
Sbjct: 582 DVEDRKAPTLVDALKERHVKNIACGSNFTAAICLHKWVSGTEQSQCSACRQAFGFTRKRH 641

Query: 667 NCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQ---IPRNS 723
           NCYNCGLV+C  CSSKKS+K ALAP   KPYRVCD C  KL+  SE+  +S+   +PR S
Sbjct: 642 NCYNCGLVHCHSCSSKKSLKAALAPNPGKPYRVCDSCHSKLSKVSEANIDSRKNVMPRLS 701

Query: 724 ----------------SGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQ 767
                           SG+  N   + + +N  +R      +    ++   +P    K  
Sbjct: 702 GENKDRLDKTEIRLAKSGIPSNIDLIKQLDNRAARQGKKADTFSLVRTSQ-TPLTQLKDA 760

Query: 768 WEPNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSITMNSF-TDLANSEVIFEYSK 826
               +D  +     A  P S   SR  SP SR+SSP  S+T       L  S  I E  K
Sbjct: 761 LTNVADLRRGPPKPAVTPSS---SRPVSPFSRRSSPPRSVTPIPLNVGLGFSTSIAESLK 817

Query: 827 QTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIR 886
           +TN+  NQE   LRAQ E L  + +  E E++++ +K++E   +A EE+ K++AA+EVI+
Sbjct: 818 KTNELLNQEVVRLRAQAESLRHRCEVQEFEVQKSVKKVQEAMSLAAEESAKSEAAKEVIK 877

Query: 887 SLTAQARPGSAL 898
           SLTAQ +  +AL
Sbjct: 878 SLTAQVKDIAAL 889


>gi|297839563|ref|XP_002887663.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333504|gb|EFH63922.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1103

 Score =  813 bits (2099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/935 (47%), Positives = 607/935 (64%), Gaps = 77/935 (8%)

Query: 11  ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
           + + EQA+  LKKGT LLKYGR+GKPKF PFRLS+DEK LIW +   EK+LKL+ VS+I+
Sbjct: 11  DHNVEQALITLKKGTQLLKYGRKGKPKFYPFRLSTDEKSLIWISSSGEKRLKLASVSKIV 70

Query: 71  PGQRTAVFQRYPQPEKEYQSFSLIY--RNRSLDLICKDKDEAELWFTALRALISEDNRCK 128
           PGQRTAVFQRY +PEK+Y SFSL+Y  + +SLDLICKDK EAE+W   L+ LIS     +
Sbjct: 71  PGQRTAVFQRYLRPEKDYLSFSLLYNGKKKSLDLICKDKVEAEIWIGGLKTLISTGQGGR 130

Query: 129 SRSDS-----ISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           S+ D      +S D+ R                DLT+     +        +SP    G 
Sbjct: 131 SKIDGWSGGGLSVDASR----------------DLTSSSPSSSSASASRGHSSP----GT 170

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDAN--SRSSTADSFRISLSSAVSSSS 241
            F+    F   A   +    V  +    +   LD+ N  ++ S +D FR+S+SSA SSSS
Sbjct: 171 PFN----FDPVASPKSVEPEVPPTDTEKSHVALDNKNMQTKVSGSDGFRVSVSSAQSSSS 226

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
            GS  +D D LGDV+IWGE + + ++   ++        R D L+PK LES +VLD   I
Sbjct: 227 HGSAADDSDALGDVYIWGEVICDNVVKVGIDKNASYLTTRTDVLVPKPLESNIVLDVHQI 286

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG-SNIHMVACGEFHT 360
           ACG +HA  VT+QG+IF+WGE SGG+LGHG+  DV +P+L+++L   S++  VACGEFHT
Sbjct: 287 ACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHT 346

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           CAVTL+G+LYTWGDG HN+GLLG  S+ISHWIP++++G +EGL ++S+ CGPWHTA ITS
Sbjct: 347 CAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGCLEGLHVASVTCGPWHTALITS 406

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            G+LFTFGDGTFG LGHGDR +   PREVE+L  L+T+  SCGVWHTAA+VE+    S S
Sbjct: 407 YGRLFTFGDGTFGVLGHGDRETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVTQSNS 466

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
           + +SS KLFTWGDG + +LGHGD +PR+ P CV    D +F K+ACGHS+T+ LT +GQV
Sbjct: 467 SSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTTSGQV 526

Query: 541 FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
           F+MGS  YGQLG+  + GK P  +E  +   ++E+I+CG+YH+A ++S++EVYTWGKGAN
Sbjct: 527 FTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWGKGAN 586

Query: 601 GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFN 660
           G+LGHGD E+++ PTLVEAL+D+ VK + CGSN+TAAICLHK VS A+ S CS CR  F 
Sbjct: 587 GRLGHGDLEDRKVPTLVEALKDRHVKYIACGSNYTAAICLHKWVSGAEQSQCSTCRLAFG 646

Query: 661 FRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSE----SGSN 716
           F R+RHNCYNCGLV+C  CSSKK+ + ALAP   + YRVCD C++KL+  SE    +  N
Sbjct: 647 FTRKRHNCYNCGLVHCHSCSSKKAFRAALAPSAGRLYRVCDSCYVKLSKVSEINDTNRRN 706

Query: 717 SQIPRNSSGLFQNCKRVTEKE---------NMNSRSATDGQSKPKGK-----SYHASPSL 762
           S +PR S    +N  R+ + E         NM+     D ++  +GK     S   +  L
Sbjct: 707 SVVPRLSG---ENKDRLDKSEIRLAKFGTSNMDLIKQLDSKAAKQGKKTDTFSLGRNSQL 763

Query: 763 NGKFQWEPNSDFIKSN---------KISASPPGSRRVSRAPSPISRKSSPACSIT-MNSF 812
               Q +   D ++SN         K++ +P G    SR+ SP SR+SSP  S T M S 
Sbjct: 764 PSLLQLK---DAVQSNIGDMRRATPKLAPAPSGIS--SRSVSPFSRRSSPPRSATPMPST 818

Query: 813 TDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQ 872
           + L     I +  K+TN+  NQE   LR Q++ LT+K +  EVEL+ + +K +E   +A+
Sbjct: 819 SGLYFPVGIADNMKKTNEILNQEIVKLRTQVDSLTQKCELQEVELQNSVKKTQEALALAE 878

Query: 873 EEAEKNKAAQEVIRSLTAQAR-------PGSALGI 900
           EE+ K++AA+E I+SL AQ +       PG +L +
Sbjct: 879 EESAKSRAAKEAIKSLIAQLKDVAEKLPPGESLKL 913


>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1083

 Score =  811 bits (2096), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/921 (48%), Positives = 601/921 (65%), Gaps = 66/921 (7%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           V RD EQA+  LKKG  LLKYGR+GKPKFCPFRLS+DE  LIW +   EK+LKL+ VS+I
Sbjct: 10  VVRDIEQALIALKKGAQLLKYGRKGKPKFCPFRLSNDETSLIWISNGGEKRLKLATVSKI 69

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIY--RNRSLDLICKDKDEAELWFTALRALISED--- 124
           +PGQRTAVFQRY +P+K+Y SFSLIY  R R+LDLICKDK EAE+W   L+ALIS     
Sbjct: 70  VPGQRTAVFQRYLRPDKDYLSFSLIYSNRKRTLDLICKDKVEAEVWIAGLKALISGQAGR 129

Query: 125 NRCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKA 184
           ++    SD   S +       +SP++ S  +S   N               +P N     
Sbjct: 130 SKIDGWSDGGLSIADSRDLTLSSPTNSSVCASRDYN------------IAETPYNS---- 173

Query: 185 FSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANS--RSSTADSFRISLSSAVSSSSQ 242
                  TA  +      SVS   + VAS   D  N   R   +D FR+S+SS  SSSS 
Sbjct: 174 -------TAFPRTSRTENSVSSERSHVAS---DSPNMLVRGPGSDVFRVSVSSVQSSSSH 223

Query: 243 GSCHEDFDGLGDVFIWGEGLGNGL--LGGAVNGVEISSADRRDALLPKVLESTVVLDAQS 300
           GS  +D D LGDV+IWGE L + +   G   N   + S  R D L+PK LES VVLD   
Sbjct: 224 GSAPDDCDALGDVYIWGEVLCDNVAKFGAEKNATCVGS--RSDVLIPKPLESNVVLDVHH 281

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           IACG +HA LV++QG++F+WGE SGG+LGHG+  DV+ P+LI++L  +++  VACGEFHT
Sbjct: 282 IACGVRHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSVDFVACGEFHT 341

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           CAVT++G++YTWGDG HN GLLG  +++SHWIP+++SG +EGLQI+S+ CGPWHTA ITS
Sbjct: 342 CAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITS 401

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            G+LFTFGDGTFG LGHGD+ +   PREVE+L  L+T+  +CGVWH AAIVEV   T  +
Sbjct: 402 TGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEVI-VTQST 460

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
           + +SS KLFTWGDG + +LGHGD E R+ P CV    D +F +VACGHS+T+ LT +G+V
Sbjct: 461 SSISSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALIDHTFHRVACGHSLTVGLTTSGKV 520

Query: 541 FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
           ++MGS  YGQLG+P + GK P  +E  +    +E+IACG+YH+AV++S++EV+TWGKGAN
Sbjct: 521 YTMGSTVYGQLGNPNADGKLPCLVEDKLIKDCVEEIACGAYHVAVLTSRNEVFTWGKGAN 580

Query: 601 GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFN 660
           G+LGHGD E+++ P+LV+ L+++ VK++ CGSNFTAAICLHK VS  + S CS CR  F 
Sbjct: 581 GRLGHGDIEDRKAPSLVDTLKERHVKNIACGSNFTAAICLHKWVSGTEQSQCSACRQAFG 640

Query: 661 FRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQ-- 718
           F R+RHNCYNCGLV+C  CSSKKS+K ALAP   KPYRVCD C+ KL+  SE+ ++S+  
Sbjct: 641 FTRKRHNCYNCGLVHCHSCSSKKSLKAALAPNPGKPYRVCDSCYSKLSKVSEASTDSRKN 700

Query: 719 -IPRNSSGLFQNCKRVTEKE----------------NMNSRSATDGQSKPKGKSYHAS-- 759
            +PR S    +N  R+ + E                 ++SR+A  G+          S  
Sbjct: 701 IMPRLSG---ENKDRLDKAEIRLAKSGIPSNIDLIRQLDSRAARQGKKADTFSLVRTSQT 757

Query: 760 PSLNGKFQWEPNSDFIKS-NKISASPPGSRRVSRAPSPISRKSSPACSITMNSFT-DLAN 817
           P    +      +D  +   K + +P G+   SR+ SP SR+SSP  S+T    T  L  
Sbjct: 758 PLTQLRDALTNVADLRRGPPKPAVTPSGAS--SRSVSPFSRRSSPPRSVTPIPLTAGLGF 815

Query: 818 SEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEK 877
           S  I E  K+TN+  NQE   LRAQ E L  + +  E E++++ +K+KE   +A EE+ K
Sbjct: 816 STSIAESLKKTNELLNQEVVKLRAQAESLRHRCEVQEFEVQKSVKKVKEAMNLAAEESAK 875

Query: 878 NKAAQEVIRSLTAQARPGSAL 898
           ++AA+EVI+SLTAQ +  +AL
Sbjct: 876 SEAAKEVIKSLTAQVKDIAAL 896


>gi|18087541|gb|AAL58903.1|AF462811_1 At1g76950/F22K20_5 [Arabidopsis thaliana]
 gi|27363446|gb|AAO11642.1| At1g76950/F22K20_5 [Arabidopsis thaliana]
          Length = 1103

 Score =  811 bits (2095), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/926 (47%), Positives = 604/926 (65%), Gaps = 60/926 (6%)

Query: 1   MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ 60
           MA        + + EQA+  LKKGT LLKYGR+GKPKF PFRLSSDEK LIW +   EK+
Sbjct: 1   MADLVTYSNADHNLEQALITLKKGTQLLKYGRKGKPKFYPFRLSSDEKSLIWISSSGEKR 60

Query: 61  LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIY--RNRSLDLICKDKDEAELWFTALR 118
           LKL+ VS+I+PGQRTAVFQRY +PEK+Y SFSL+Y  + +SLDLICKDK EAE+W   L+
Sbjct: 61  LKLASVSKIVPGQRTAVFQRYLRPEKDYLSFSLLYNGKKKSLDLICKDKVEAEIWIGGLK 120

Query: 119 ALISEDNRCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQ 178
            LIS     +S+ +  S                  +S D + + +  +     A  +   
Sbjct: 121 TLISTGQGGRSKINGWSG---------------GGLSVDASRELTSSSPSSSSASASRGH 165

Query: 179 NRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDAN--SRSSTADSFRISLSSA 236
           +  G  F+ +   T+   A           + VA   LD+ N  ++ S +D FR+S+SSA
Sbjct: 166 SSPGTPFN-IDPITSPKSAEPEVPPTDSEKSHVA---LDNKNMQTKVSGSDGFRVSVSSA 221

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
            SSSS GS  +D D LGDV+IWGE + + ++   ++        R D L+PK LES +VL
Sbjct: 222 QSSSSHGSAADDSDALGDVYIWGEVICDNVVKVGIDKNASYLTTRTDVLVPKPLESNIVL 281

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG-SNIHMVAC 355
           D   IACG +HA  VT+QG+IF+WGE SGG+LGHG+  DV +P+L+++L   S++  VAC
Sbjct: 282 DVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVAC 341

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
           GEFHTCAVTL+G+LYTWGDG HN+GLLG  S+ISHWIP++++G +EGL ++S+ CGPWHT
Sbjct: 342 GEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHT 401

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A ITS G+LFTFGDGTFG LGHGD+ +   PREVE+L  L+T+  SCGVWHTAA+VE+  
Sbjct: 402 ALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIV 461

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             S S+ +SS KLFTWGDG + +LGHGD +PR+ P CV    D +F K+ACGHS+T+ LT
Sbjct: 462 TQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLT 521

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
            +GQVF+MGS  YGQLG+  + GK P  +E  +   ++E+I+CG+YH+A ++S++EVYTW
Sbjct: 522 TSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTW 581

Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGC 655
           GKGANG+LGHGD E+++ PT+VEAL+D+ VK + CGSN+TAAICLHK VS A+ S CS C
Sbjct: 582 GKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICLHKWVSGAEQSQCSTC 641

Query: 656 RNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSE--- 712
           R  F F R+RHNCYNCGLV+C  CSSKK+ + ALAP   + YRVCD C++KL+  SE   
Sbjct: 642 RLAFGFTRKRHNCYNCGLVHCHSCSSKKAFRAALAPSAGRLYRVCDSCYVKLSKVSEIND 701

Query: 713 -SGSNSQIPRNSSGLFQNCKRVTEKE---------NMNSRSATDGQSKPKGK-----SYH 757
            +  NS +PR S    +N  R+ + E         NM+     D ++  +GK     S  
Sbjct: 702 TNRRNSAVPRLSG---ENRDRLDKSEIRLAKFGTSNMDLIKQLDSKAAKQGKKTDTFSLG 758

Query: 758 ASPSLNGKFQWEPNSDFIKSN---------KISASPPGSRRVSRAPSPISRKSSPACSIT 808
            +  L    Q +   D ++SN         K++ +P G    SR+ SP SR+SSP  S T
Sbjct: 759 RNSQLPSLLQLK---DAVQSNIGDMRRATPKLAQAPSGIS--SRSVSPFSRRSSPPRSAT 813

Query: 809 -MNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKET 867
            M S + L     I +  K+TN+  NQE   LR Q++ LT+K +F EVEL+ + +K +E 
Sbjct: 814 PMPSTSGLYFPVGIADNMKKTNEILNQEIVKLRTQVDSLTQKCEFQEVELQNSVKKTQEA 873

Query: 868 TQIAQEEAEKNKAAQEVIRSLTAQAR 893
             +A+EE+ K++AA+E I+SL AQ +
Sbjct: 874 LALAEEESAKSRAAKEAIKSLIAQLK 899


>gi|2829910|gb|AAC00618.1| Unknown protein, contains regulator of chromosome condensation
           motifs [Arabidopsis thaliana]
          Length = 1108

 Score =  809 bits (2090), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/925 (48%), Positives = 605/925 (65%), Gaps = 62/925 (6%)

Query: 4   FQQNILVER--DTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQL 61
           F+  +LV+      QA+  LKKGT LLKYGR+GKPKF PFRLSSDEK LIW +   EK+L
Sbjct: 7   FRHTVLVKVIFYIWQALITLKKGTQLLKYGRKGKPKFYPFRLSSDEKSLIWISSSGEKRL 66

Query: 62  KLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIY--RNRSLDLICKDKDEAELWFTALRA 119
           KL+ VS+I+PGQRTAVFQRY +PEK+Y SFSL+Y  + +SLDLICKDK EAE+W   L+ 
Sbjct: 67  KLASVSKIVPGQRTAVFQRYLRPEKDYLSFSLLYNGKKKSLDLICKDKVEAEIWIGGLKT 126

Query: 120 LISEDNRCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQN 179
           LIS     +S+ D  S                  +S D + + +  +     A  +   +
Sbjct: 127 LISTGQGGRSKIDGWSG---------------GGLSVDASRELTSSSPSSSSASASRGHS 171

Query: 180 RLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDAN--SRSSTADSFRISLSSAV 237
             G  F+ +   T+   A           + VA   LD+ N  ++ S +D FR+S+SSA 
Sbjct: 172 SPGTPFN-IDPITSPKSAEPEVPPTDSEKSHVA---LDNKNMQTKVSGSDGFRVSVSSAQ 227

Query: 238 SSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLD 297
           SSSS GS  +D D LGDV+IWGE + + ++   ++        R D L+PK LES +VLD
Sbjct: 228 SSSSHGSAADDSDALGDVYIWGEVICDNVVKVGIDKNASYLTTRTDVLVPKPLESNIVLD 287

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG-SNIHMVACG 356
              IACG +HA  VT+QG+IF+WGE SGG+LGHG+  DV +P+L+++L   S++  VACG
Sbjct: 288 VHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACG 347

Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
           EFHTCAVTL+G+LYTWGDG HN+GLLG  S+ISHWIP++++G +EGL ++S+ CGPWHTA
Sbjct: 348 EFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPWHTA 407

Query: 417 AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
            ITS G+LFTFGDGTFG LGHGD+ +   PREVE+L  L+T+  SCGVWHTAA+VE+   
Sbjct: 408 LITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGVWHTAAVVEIIVT 467

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
            S S+ +SS KLFTWGDG + +LGHGD +PR+ P CV    D +F K+ACGHS+T+ LT 
Sbjct: 468 QSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKIACGHSLTVGLTT 527

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           +GQVF+MGS  YGQLG+  + GK P  +E  +   ++E+I+CG+YH+A ++S++EVYTWG
Sbjct: 528 SGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAALTSRNEVYTWG 587

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCR 656
           KGANG+LGHGD E+++ PT+VEAL+D+ VK + CGSN+TAAICLHK VS A+ S CS CR
Sbjct: 588 KGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAICLHKWVSGAEQSQCSTCR 647

Query: 657 NQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSE---- 712
             F F R+RHNCYNCGLV+C  CSSKK+ + ALAP   + YRVCD C++KL+  SE    
Sbjct: 648 LAFGFTRKRHNCYNCGLVHCHSCSSKKAFRAALAPSAGRLYRVCDSCYVKLSKVSEINDT 707

Query: 713 SGSNSQIPRNSSGLFQNCKRVTEKE---------NMNSRSATDGQSKPKGK-----SYHA 758
           +  NS +PR S    +N  R+ + E         NM+     D ++  +GK     S   
Sbjct: 708 NRRNSAVPRLSG---ENRDRLDKSEIRLAKFGTSNMDLIKQLDSKAAKQGKKTDTFSLGR 764

Query: 759 SPSLNGKFQWEPNSDFIKSN---------KISASPPGSRRVSRAPSPISRKSSPACSIT- 808
           +  L    Q +   D ++SN         K++ +P G    SR+ SP SR+SSP  S T 
Sbjct: 765 NSQLPSLLQLK---DAVQSNIGDMRRATPKLAQAPSGIS--SRSVSPFSRRSSPPRSATP 819

Query: 809 MNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETT 868
           M S + L     I +  K+TN+  NQE   LR Q++ LT+K +F EVEL+ + +K +E  
Sbjct: 820 MPSTSGLYFPVGIADNMKKTNEILNQEIVKLRTQVDSLTQKCEFQEVELQNSVKKTQEAL 879

Query: 869 QIAQEEAEKNKAAQEVIRSLTAQAR 893
            +A+EE+ K++AA+E I+SL AQ +
Sbjct: 880 ALAEEESAKSRAAKEAIKSLIAQLK 904


>gi|168035990|ref|XP_001770491.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678199|gb|EDQ64660.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1102

 Score =  807 bits (2084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/967 (49%), Positives = 626/967 (64%), Gaps = 91/967 (9%)

Query: 1   MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ 60
           MA   ++  +ERD EQA+  LKKG  LLKYGRRGKPKFCPF+LS+DE  LIWY+G EEK+
Sbjct: 1   MADHSRHGNLERDVEQAIIALKKGAQLLKYGRRGKPKFCPFKLSNDENALIWYSGGEEKK 60

Query: 61  LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALR 118
           L LS VS+I+ GQRT VF RYP+P K  QSFSLIY N  RSLDL   DKDEA++WF  L+
Sbjct: 61  LWLSTVSKILSGQRTPVFLRYPRPGKVCQSFSLIYSNEERSLDL---DKDEADVWFVGLK 117

Query: 119 ALISEDNRCKSRSDSIS---SDSPRSHTQKNSPSHVSSI--SSDLTNKDSGD---TQPIL 170
           A ++     KS+ ++I+   S +  +H+ K S   ++S   S D   ++SGD   T   +
Sbjct: 118 ASVAGAQLRKSKLNNINHVGSTNATNHSLKRSSLSLTSRFGSFDNLRRESGDFFKTSSFI 177

Query: 171 VAYENSPQNRLGKAFSEVLS---FTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTAD 227
            +   S +  LG + S V +   + A +   +     S   +   S  L    +  S  D
Sbjct: 178 GSPLRSEKGYLGGSLSTVETKNNYDAGSVGGSMHSGSSSMGSDSVSAQLRLVGAGQS--D 235

Query: 228 SFRISLSSAVSSSSQGSCH-ED----FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRR 282
           ++RIS+SSAVSSSSQ S H ED     + LGDV++WGEG+G+G+LGG    +    A   
Sbjct: 236 NYRISMSSAVSSSSQSSQHGEDGSHHAEALGDVYMWGEGVGDGILGGGSVRIGAGGAMNL 295

Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
           DA LPK LES +VLD Q +ACG KHA LVTKQG++F+WGE SGG+LGHGV+ DVS+P+L+
Sbjct: 296 DAPLPKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLV 355

Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
           +AL  S   +VACGE+H CAVTLSGDLYTWGDG H+LGLLG  ++ISHWIP++V+G +E 
Sbjct: 356 EALASSTTEVVACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPLEE 415

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
           ++++SI CGPWHTA +T+AG+LFTFGDGTFG LGH DR S   PREVE+LK L+TV A+C
Sbjct: 416 VRVASIACGPWHTAVVTTAGQLFTFGDGTFGVLGHNDRQSAYSPREVESLKGLRTVRAAC 475

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
           GVWHTAA+VEV   +S ++  SS KLFTWGDG +G+LGHGD E R+VP CV    D +F 
Sbjct: 476 GVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDHNFR 535

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
           KVACGHS+T+ALT  G+VF+MGS+ +GQLG P + GK P  +EG +   Y+EDIACG++H
Sbjct: 536 KVACGHSLTVALTTKGEVFTMGSSMFGQLGDPQADGKLPGMVEGRLVDAYVEDIACGAHH 595

Query: 583 IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHK 642
           +A V+ KSEVYTWGKGANG+LGHGD E++ TPTLVEAL++KQVKS+ CG+ FTAA+CLHK
Sbjct: 596 VACVTLKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGATFTAAVCLHK 655

Query: 643 GVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDD 702
            +S AD + CSGCR  F+F R+RHNCYNCGLV+C  CSSKK++K +LAP   KPYRVCD 
Sbjct: 656 WLSGADQNACSGCRQPFSFTRKRHNCYNCGLVFCHACSSKKALKASLAPNPGKPYRVCDP 715

Query: 703 CFIKLNTTSESG-------SNSQIPRNSSGL----------FQ----------------- 728
           C +KL   SE G       S    P  + G+          F+                 
Sbjct: 716 CCVKLRKASEGGVGAGASLSKRGAPSRNRGMEVKEGSGKGEFRVPRPQAPNAGRPPITLE 775

Query: 729 ---------NCKRVTEKENMNSRSATDGQSKPKGKSYHA------------SPSLNGKFQ 767
                      KR  + EN +SR +        G ++ A             PSLNG   
Sbjct: 776 FGKAGEGKLGMKRGKKPENSSSRVSPVPNGTSGGSTWGAVSVPAGFSKPPFQPSLNGPL- 834

Query: 768 WEPNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSITMNSF-TDLANSEVIFEYSK 826
                       IS+S    R VSRA SP+SR++SP  S T     + LA  + + E  K
Sbjct: 835 -----------AISSSVVSGRAVSRAVSPLSRRTSPPRSTTPTPTGSGLAIPKTVVEDLK 883

Query: 827 QTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIR 886
           +TND  + E   LR+ +E L+R+ Q L+ E +R++++L+    +A EE+ K++AA+EVI+
Sbjct: 884 KTNDTLSCENIQLRSHIESLSRELQRLDGEFQRSAQQLQNAVVMATEESAKSRAAKEVIK 943

Query: 887 SLTAQAR 893
           SLT Q +
Sbjct: 944 SLTTQLK 950


>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
 gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
          Length = 1090

 Score =  806 bits (2082), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/731 (56%), Positives = 526/731 (71%), Gaps = 38/731 (5%)

Query: 1   MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ 60
           MA   +N  VERD EQA+  LKKG  LLKYGRRGKPKFCPFRLS+DE  LIWY+GKEEK 
Sbjct: 1   MADLARNGAVERDIEQAITALKKGAQLLKYGRRGKPKFCPFRLSNDETHLIWYSGKEEKS 60

Query: 61  LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRN-RSLDLICKDKDEAELWFTALRA 119
           L+LS ++RI+PGQRTA FQRYP+ EKEYQSFSLIY N RSLDLICKDKDEAE+WF  L+A
Sbjct: 61  LRLSSITRIVPGQRTANFQRYPRLEKEYQSFSLIYGNDRSLDLICKDKDEAEVWFVGLKA 120

Query: 120 LISEDNRCKSRSDSISSDSPRSHTQKNSPSHVSSIS---------SDLTNKDSGDTQPIL 170
           L+S     + R DS S   P S +  NSP+  S IS          +L  +D  +     
Sbjct: 121 LVSGGQLSRLRFDSRSECGPPSDS--NSPATWSRISPASSPFGNVDNLPRQDGREAFRFQ 178

Query: 171 VAYENSPQNRLG-KAFSE-VLSFTAAAKAYTRAESVSKSLNFVAS-----------GGLD 217
             Y + P+  L  ++FS    S  +++K +    S + SL+   S           GG  
Sbjct: 179 SPYGSPPRYALQQRSFSPGAPSLDSSSKLFLENASTAGSLHSDMSSEPAASVLHLRGGAA 238

Query: 218 DANSRSSTADS-FRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEI 276
            A S +   D+ FR+S+SSAVSSSSQGS  E+ D LGDVF+WGE +G+G           
Sbjct: 239 AATSAAIPLDANFRVSMSSAVSSSSQGSGQEEGDALGDVFLWGESVGSG----------- 287

Query: 277 SSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV 336
               + D+LLPK LES VVLD   IACG++HA LVTKQG++F WG+ SGG+LGHGV+ DV
Sbjct: 288 DGGIKTDSLLPKALESAVVLDVHHIACGNRHAALVTKQGEVFCWGDESGGRLGHGVDVDV 347

Query: 337 SYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV 396
           ++PKL++AL  +N   VACGE+H+CAVTLSGDL+TWGDG H+ GLLG  ++ISHW P++V
Sbjct: 348 AHPKLVEALATTNTEFVACGEYHSCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTPKRV 407

Query: 397 SGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK 456
            G +EG+++SS+ CG WHTA +TSAG+LFTFGDGTFG LGHGD+ S ++P+EVE+LK LK
Sbjct: 408 GGPLEGIRVSSVACGVWHTALVTSAGQLFTFGDGTFGVLGHGDKRSVALPKEVESLKGLK 467

Query: 457 TVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
           TV  +CGVWHTAA+VEV    S + G SS KLFTWGDG +G+LGHGD E ++VP CV   
Sbjct: 468 TVRVACGVWHTAAVVEVMVGYSNAGG-SSGKLFTWGDGDKGRLGHGDKEQKLVPTCVAAL 526

Query: 517 DDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDI 576
            D +F +VACGH++T+ALT  G+VF+MGS+ YGQLG   + GK P  +EG +   ++E+I
Sbjct: 527 VDYNFKQVACGHTLTVALTINGRVFTMGSSLYGQLGDVRADGKLPGLVEGRLWEAFVEEI 586

Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTA 636
           ACG+YH+AV+++K+EVYTWGKGANG+LGHGD  ++ TPTLVEAL++KQVKSV CGS FTA
Sbjct: 587 ACGAYHVAVLTAKTEVYTWGKGANGRLGHGDVMDRNTPTLVEALKEKQVKSVACGSGFTA 646

Query: 637 AICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKP 696
           AICLHK VS AD S+CSGCR  F F R+RHNCYNCG  +C  CS++K++K +LAP   KP
Sbjct: 647 AICLHKWVSGADQSLCSGCRQPFGFTRKRHNCYNCGHAFCHSCSARKALKASLAPNPAKP 706

Query: 697 YRVCDDCFIKL 707
           YRVCD CF+KL
Sbjct: 707 YRVCDPCFVKL 717


>gi|302822159|ref|XP_002992739.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
 gi|300139480|gb|EFJ06220.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
          Length = 982

 Score =  804 bits (2077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/896 (49%), Positives = 589/896 (65%), Gaps = 63/896 (7%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
           ++RD EQA+  LKKG+ LLKYGRRG+PKF PFRLS+DE  LIW++G++E+QL+L  V++I
Sbjct: 11  LDRDVEQAIIALKKGSQLLKYGRRGRPKFAPFRLSNDETTLIWFSGRKERQLRLDAVTKI 70

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIY----RNRSLDLICKDKDEAELWFTALRALISEDN 125
           IPGQRTA FQRYP+PEKEYQSFSLIY      RSLDLICKDKDEAE+WF  L+A +S + 
Sbjct: 71  IPGQRTANFQRYPRPEKEYQSFSLIYGSGGEERSLDLICKDKDEAEVWFVGLKARVSSN- 129

Query: 126 RCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAF 185
               R+  + + S  + +  NSP   +   S L + DS +  P       SP        
Sbjct: 130 ----RTLKVDNKSEGTLSDVNSPLGRALRDSPLNSYDSFNRSPY-----GSPS------- 173

Query: 186 SEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSC 245
                F  A+    ++   +KS +  +   L+      S AD+FR+S+SSAVSSSSQGS 
Sbjct: 174 ----LFKTASTGELQSVESAKSDSLASEESLNAQGRSVSLADAFRVSMSSAVSSSSQGSG 229

Query: 246 HEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGS 305
            ED D LGDVFIWGEG G G LGG V  +   +  R D+L+PK L++ VVLD  SIACGS
Sbjct: 230 PEDSDALGDVFIWGEGAGEGFLGGGVCKLTSGAGSRVDSLVPKALQAAVVLDVSSIACGS 289

Query: 306 KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTL 365
           +HA LVTKQG +F WGE  GG+LGHG++ DVS P+L+ AL G N  +VACG+FHTCAVTL
Sbjct: 290 RHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALAGVNTELVACGDFHTCAVTL 349

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
           SG+LYTWG    + GL+G  + +SHW+P+++S  +EG++ISSI CG WHTA ++SAG+LF
Sbjct: 350 SGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRISSIACGAWHTALVSSAGQLF 409

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
           TFGDGTFG LGHGD+ + ++P+EVE+LK LKTV A+CG+WHTAA+VEV    S +   SS
Sbjct: 410 TFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGIWHTAAVVEVIVGYSSATSCSS 469

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
            KLFTWGDG + +LGHGD E ++VP CV    D +F +VACGHS+T+ALT +G+VF+MGS
Sbjct: 470 GKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDYNFRQVACGHSLTVALTTSGRVFTMGS 529

Query: 546 ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
             YGQLG+P + GK P  ++G +   ++E+I CG++H+A +SSK+E+YTWGKGANG+LGH
Sbjct: 530 TIYGQLGNPKADGKVPGMVDGELARTFVEEIGCGAHHVAALSSKTEIYTWGKGANGRLGH 589

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRR 665
           GD E++  PTLVEALRDKQVK+V CGS+FTA ICLHK VS AD S+CSGC+  F F R+R
Sbjct: 590 GDVEDRTAPTLVEALRDKQVKTVACGSSFTAVICLHKPVSDADQSVCSGCKQAFGFTRKR 649

Query: 666 HNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRNSSG 725
           HNCYNCGL YC  CSSKK+ + +LAP  +K YRVC+ C  KL    E  ++ ++ R    
Sbjct: 650 HNCYNCGLAYCHSCSSKKAFRASLAPNPSKAYRVCEPCLAKL----ERSASEEVAR---- 701

Query: 726 LFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNS----DFIKSNK-- 779
                          SR   DG+ +P  ++  + P    +  +  NS    DF   ++  
Sbjct: 702 --------------KSRKYMDGRERPLIRA--SKPIEMKQVGYYGNSRNTDDFAAKHQTV 745

Query: 780 --ISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPD 837
             I  + P  + VS  PSP  R ++P  + T        N     +   + +    QE  
Sbjct: 746 INIPTAIPERKAVSAKPSP-PRSATP--TPTSAGLAPPGNGPDELQKKLELS---RQEVL 799

Query: 838 VLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
            L+ Q+  LT K +  E EL R ++K++E   +A EE  K +AA+EVI+SLT + +
Sbjct: 800 HLKTQISTLTSKYEQRERELRRGAQKVQEAVLLAGEETAKCRAAKEVIKSLTVELK 855


>gi|302824131|ref|XP_002993711.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
 gi|300138435|gb|EFJ05203.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
          Length = 991

 Score =  796 bits (2056), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/905 (48%), Positives = 589/905 (65%), Gaps = 72/905 (7%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSS---------DEKLLIWYAGKEEKQ 60
           ++RD EQA+  LKKG+ LLKYGRRG+PKF PFRLS+         DE  LIW++G++E+Q
Sbjct: 11  LDRDVEQAIIALKKGSQLLKYGRRGRPKFAPFRLSNAWLLSSLDQDETTLIWFSGRKERQ 70

Query: 61  LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIY----RNRSLDLICKDKDEAELWFTA 116
           L+L  V++IIPGQRTA FQRYP+PEKEYQSFSLIY      RSLDLICKDKDEAE+WF  
Sbjct: 71  LRLDAVTKIIPGQRTANFQRYPRPEKEYQSFSLIYGSGGEERSLDLICKDKDEAEVWFVG 130

Query: 117 LRALISEDNRCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENS 176
           L+A +S +     R+  + + S  + +  NSP   +   S L + DS +  P       S
Sbjct: 131 LKARVSSN-----RTLKVDNKSEGTLSDVNSPLGRALRDSPLNSYDSFNRSPY-----GS 180

Query: 177 PQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSA 236
           P             F  A+    ++   +KS +  +   L+      S AD+FR+S+SSA
Sbjct: 181 PS-----------LFKTASTGELQSVESAKSDSLASEESLNAQGRSVSLADAFRVSMSSA 229

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           VSSSSQGS  ED D LGDVFIWGEG G G LGG V  +   +  R D+L+PK L++ VVL
Sbjct: 230 VSSSSQGSGPEDSDALGDVFIWGEGAGEGFLGGGVCKLTSGAGSRVDSLVPKALQAAVVL 289

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG 356
           D  SIACGS+HA LVTKQG +F WGE  GG+LGHG++ DVS P+L+ AL G N  +VACG
Sbjct: 290 DVSSIACGSRHAALVTKQGDVFCWGEEYGGRLGHGIDVDVSEPQLVQALAGVNAELVACG 349

Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
           +FHTCAVTLSG+LYTWG    + GL+G  + +SHW+P+++S  +EG++ISSI CG WHTA
Sbjct: 350 DFHTCAVTLSGELYTWGADAQSGGLVGHSNPVSHWMPKRMSSPLEGVRISSIACGAWHTA 409

Query: 417 AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
            ++SAG+LFTFGDGTFG LGHGD+ + ++P+EVE+LK LKTV A+CG+WHTAA+VEV   
Sbjct: 410 LVSSAGQLFTFGDGTFGVLGHGDKRNLAIPKEVESLKGLKTVRAACGIWHTAAVVEVIVG 469

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
            S +   SS KLFTWGDG + +LGHGD E ++VP CV    D +F +VACGHS+T+ALT 
Sbjct: 470 YSSATSCSSGKLFTWGDGDKYRLGHGDKEQKLVPTCVAALVDYNFRQVACGHSLTVALTT 529

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           +G+VF+MGS  YGQLG+P + GK P  ++G +   ++E+I CG++H+A +SSK+E+YTWG
Sbjct: 530 SGRVFTMGSTIYGQLGNPKADGKVPGMVDGELARTFVEEIGCGAHHVAALSSKTEIYTWG 589

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCR 656
           KGANG+LGHGD E++  PTLVEALRDKQVK+V CGS+FTA ICLHK VS AD S+CSGC+
Sbjct: 590 KGANGRLGHGDVEDRTAPTLVEALRDKQVKTVACGSSFTAVICLHKPVSDADQSVCSGCK 649

Query: 657 NQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSN 716
             F F R+RHNCYNCGL YC  CSSKK+ + +LAP  +K YRVC+ C  KL    E  ++
Sbjct: 650 QAFGFTRKRHNCYNCGLAYCHSCSSKKAFRASLAPNPSKAYRVCEPCLAKL----ERSAS 705

Query: 717 SQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNS---- 772
            ++ R                   SR   DG+ +P  ++  + P    +  +  NS    
Sbjct: 706 EEVAR------------------KSRKYMDGRERPLIRA--SKPIEMKQVGYYGNSRNTD 745

Query: 773 DFIKSNK----ISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQT 828
           DF   ++    I  + P  + VS  PSP  R ++P  + T        N     +   + 
Sbjct: 746 DFAAKHQTVINIPTAIPERKAVSAKPSP-PRSATP--TPTSAGLAPPGNGPDELQKKLEL 802

Query: 829 NDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSL 888
           +    QE   L+ Q+  LT K +  E EL R ++K++E   +A EE  K +AA+EVI+SL
Sbjct: 803 S---RQEVLHLKTQISTLTSKYEQRERELRRGAQKVQEAVLLAGEETAKCRAAKEVIKSL 859

Query: 889 TAQAR 893
           T + +
Sbjct: 860 TVELK 864


>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
          Length = 1082

 Score =  793 bits (2048), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/920 (47%), Positives = 578/920 (62%), Gaps = 84/920 (9%)

Query: 11  ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
           ERD EQA+  LKKGT L+KY R+GKPKF PFR+S+DE  LIWY+  EE+ LKLS VSRII
Sbjct: 11  ERDIEQALVTLKKGTQLIKYSRKGKPKFRPFRISTDETTLIWYSHGEERNLKLSSVSRII 70

Query: 71  PGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCK 128
           PGQRTAVF+RY +PEK+Y SFSL+Y N  RSLDLICKDK EAE+W   L+ALIS     +
Sbjct: 71  PGQRTAVFRRYLRPEKDYLSFSLLYNNGERSLDLICKDKVEAEVWLAGLQALISTG---Q 127

Query: 129 SRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEV 188
            R+    SD P  H                   D GD            QN  G+ F   
Sbjct: 128 HRNRRTRSDIPDFH-------------------DGGDFI----------QN--GRPFGVN 156

Query: 189 LSFT---AAAKAYTRAESVSKSLNFVAS-GGLDDANS--RSSTADSFRISLSSAVSSSSQ 242
           L F    A  ++     S   SLN+ +S  G +  N   R+S  D FRIS+SS  S SSQ
Sbjct: 157 LDFASSIARGRSSVDLSSRDSSLNWASSDAGSERTNMQLRTSGVDGFRISVSSTPSCSSQ 216

Query: 243 GSCHEDFDGLGDVFIWGEGLGNGLL-GGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
           GS  +D + LGDV++WGE   +G+L  G+V+   I    + D L PK LES VVLD   I
Sbjct: 217 GSGPDDIESLGDVYVWGEVWCDGVLPDGSVSPFPI----KIDVLTPKSLESNVVLDVHQI 272

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           ACG +H  LVT+QG++F+WGE SGG+LGHG++ D S P L++ L  +N+  VACGE+HTC
Sbjct: 273 ACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTC 332

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV+ SGDL+TWGDG HN GLLG  +E+SHWIP++VSG +EGLQ+ S+ CG WH+A  TS 
Sbjct: 333 AVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTWHSALATSN 392

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           GKLFTFGDGTFG LGHGDR S   PREV+ L  LKT+  +CGVWHTAAI+EV  + SG+N
Sbjct: 393 GKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQ-SGTN 451

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
            +SS+KLFTWGDG + +LGHG  E  ++P CV    D +F ++ACGH++T+ALT +G VF
Sbjct: 452 -ISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTTSGHVF 510

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           +MG   YGQLG+P S G+ P  ++  +   ++E+I+CG+YH+AV++S+SEV+TWG+GANG
Sbjct: 511 TMGGTAYGQLGNPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANG 570

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           +LGHGD E++++PT VEAL+D+ VKS+ CGSNFTA+IC+HK VS AD S+CSGCR  F F
Sbjct: 571 RLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFTASICIHKWVSGADQSVCSGCRQAFGF 630

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPR 721
            R+RHNCYNCGLV+C  CSSKK++K ALAP   KP+RVCD C+ KL   +E+G  S   R
Sbjct: 631 TRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDPCYAKLK-AAEAGDASIFNR 689

Query: 722 NSSGLFQNCKRVTEKENMNSRSATDGQS---------KPKGKSYHASPSLNGKFQWEPN- 771
            ++   ++       +    RSA    S         KP        PS   +    P+ 
Sbjct: 690 KNTVPRRSIDATIRSDRGEVRSARILMSPGPINYFEFKPARLGPRPDPSPMIQSSQGPSL 749

Query: 772 -SDFIKSNKISASPPGSRRV-----------------SRAPSPISRKSSPACSITMNSFT 813
             D    + +SA     + V                 SR  SP SR+ SP  S       
Sbjct: 750 LKDIAFPSSLSALQNALKPVITASPQTAPPPPPQPAFSRPVSPYSRRPSPPRS------A 803

Query: 814 DLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQE 873
               S  + +  K+TN+  NQE   L+ Q+  L +KS+  + E+++  +  +E   +A E
Sbjct: 804 GPVFSRSVIDSLKKTNELLNQEVTKLQNQVRSLKQKSEGQDAEIQKLRKNAQEADLLALE 863

Query: 874 EAEKNKAAQEVIRSLTAQAR 893
           E+ K   A+EV++S+T Q +
Sbjct: 864 ESSKCTVAKEVVKSITTQLK 883


>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
 gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
          Length = 1238

 Score =  790 bits (2040), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/1003 (45%), Positives = 605/1003 (60%), Gaps = 161/1003 (16%)

Query: 17   AVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPGQRT- 75
            A+  LKKG  LLKYGR+GKPKFCPFRLS DE  L W++  EE+ LKLS VS+IIPGQRT 
Sbjct: 45   ALIALKKGAQLLKYGRKGKPKFCPFRLSKDELSLFWFSSSEERSLKLSSVSKIIPGQRTG 104

Query: 76   ----------------------------------AVFQRYPQPEKEYQSFSLIYRN--RS 99
                                              AVFQR+P+PEK+Y SFSLIY +  RS
Sbjct: 105  MGRKSLGGDGKEKLRRGREGKEGKGRKGREKGGKAVFQRFPRPEKDYLSFSLIYNHGKRS 164

Query: 100  LDLICKDKDEAELWFTALRALISEDNRCKSRSDS-----ISSDSPRSHTQKNSPSHVS-S 153
            LDLICKDK EAE+W   L ALIS     +S+ D      +  D  ++ T  NSPS  S  
Sbjct: 165  LDLICKDKVEAEVWIAGLGALISSGQGGRSKIDGWCDGGLYLDDGKNLTS-NSPSESSVR 223

Query: 154  ISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVAS 213
             S D+++ D   + P +      P+N +                + ++ + + S N    
Sbjct: 224  ASQDISSPDISASIPNVSPKSFHPENTVN---------------FEKSHAPANSPNMQVK 268

Query: 214  GGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLG-GAVN 272
            G         S++D FR+S+SSA S+SS GS  +D+D LGDV+IWGE +   ++  GA  
Sbjct: 269  G---------SSSDVFRVSVSSAPSTSSHGSAPDDYDALGDVYIWGEVISENVVKVGADK 319

Query: 273  GVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV 332
             V   S  R D LLPK LES VVLD   IACG KHA LVT+QG++F+WGE SGG+LGHGV
Sbjct: 320  NVSYCSP-RTDILLPKPLESNVVLDVLQIACGVKHAALVTRQGEMFTWGEESGGRLGHGV 378

Query: 333  EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI 392
              +V  P L++AL  S +  VACGEFHTCAVT++G++YTWGDG HN GLLG  +++SHWI
Sbjct: 379  GKNVVQPCLVEALASSTVDFVACGEFHTCAVTMAGEIYTWGDGTHNAGLLGHGTDVSHWI 438

Query: 393  PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
            P++++G +EGLQ++ + CGPWHTA ITS G+LFTFGDGTFG LGHGDR + S PREVE+L
Sbjct: 439  PKRIAGPLEGLQVAFVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENISYPREVESL 498

Query: 453  KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC 512
              L+TV  +CGVWHTAAIVEV   T  S  +SS KLFTWGDG + +LGHGD + R+ P C
Sbjct: 499  SGLRTVSVACGVWHTAAIVEVI-VTQSSASISSGKLFTWGDGDKNRLGHGDKDARLEPTC 557

Query: 513  VKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY 572
            +    D +F ++ACGHS+T+ LT +G+VF+MGS  YGQLG+P S GK P  +E  +    
Sbjct: 558  ISALIDYNFHRIACGHSLTVGLTTSGRVFTMGSTVYGQLGNPQSDGKLPCLVEDKLAGEC 617

Query: 573  IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
            +E+IACG+YH+ V++S++EVYTWGKGANG+LGHGD E+++TPTLVEAL+D+ VK + CGS
Sbjct: 618  VEEIACGAYHVTVLTSRNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGS 677

Query: 633  NFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPE 692
            N++AAICLHK VS A+ S CS CR  F F R+RHNCYNCGLV+C  CSS+K+++ ALAP 
Sbjct: 678  NYSAAICLHKWVSGAEQSQCSTCRQAFGFTRKRHNCYNCGLVHCHSCSSRKALRAALAPN 737

Query: 693  INKPYRVCDDCFIKLNTTSESGSNSQIPRNSSGLF--QNCKRVTEKE----------NMN 740
              K YRVCD C++KLN  +ES  N++  RN+   F  +N  R+ + E          NM+
Sbjct: 738  PGKLYRVCDTCYVKLNKVAESSINNR--RNAMPRFPGENKDRLEKSELRLSKPAVPSNMD 795

Query: 741  SRSATDGQSKPKGKSYHA--------SPSLNGKFQWEPNSDFIKSNKISASPPGSRRV-- 790
                 D ++  +GK            +PSL    Q +   D + S  +       R V  
Sbjct: 796  LIKQLDSKAAKQGKKADMFSLAHTTQAPSL---LQLK---DVVLSTAMDLKRTVPRPVIT 849

Query: 791  -----SRAPSPISRKSSPACSIT-MNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQL- 843
                 SR+ SP SR+SSP  S T + + + LA S+ I +  K+TND  NQE   LR+Q+ 
Sbjct: 850  PSGVNSRSVSPFSRRSSPPRSATPIPTTSGLAFSKSITDSLKKTNDLLNQEVLKLRSQVY 909

Query: 844  ------------------------------------------EDLTRKS----------- 850
                                                      E + +K+           
Sbjct: 910  YTSLISVVSIKLQNFSSILNFFSVMFESEEEIVGQILEKLDEERIEKKNEARVETLRQRC 969

Query: 851  QFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
            +  E+EL+++++K +E   +A EE+ K+KAA+EVI+SLTAQ +
Sbjct: 970  ELQELELKKSAKKTQEAMVLATEESAKSKAAKEVIKSLTAQLK 1012


>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
 gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  775 bits (2002), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/925 (45%), Positives = 580/925 (62%), Gaps = 92/925 (9%)

Query: 11  ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
           ERD EQA+  LKKGT L+KY R+GKPKF  FRLS DE  LIW +  +EK LKLS V RII
Sbjct: 11  ERDIEQALVTLKKGTQLIKYSRKGKPKFRAFRLSPDETSLIWLSHGQEKNLKLSSVLRII 70

Query: 71  PGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCK 128
           PGQRTAVF+RY +PEK+Y SFSL+Y N  RSLDLICKDK EAE+W   L+ALI +++  +
Sbjct: 71  PGQRTAVFRRYLRPEKDYLSFSLLYNNGERSLDLICKDKVEAEVWLAGLKALIGKNHNRR 130

Query: 129 SRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEV 188
           +RS+                       SD    D          Y+N      G+ F   
Sbjct: 131 TRSNI----------------------SDFQLTDGE-------LYQN------GRPFGAT 155

Query: 189 LSFT---AAAKAYTRAESVSKSLNFVASGGLDDANS--RSSTADSFRISLSSAVSSSSQG 243
           L FT   A  +      S    L+  +S   + ++   R+ST   FRIS+SS  S SS G
Sbjct: 156 LEFTSSLARGRVSIDLGSRDNPLDLRSSDVSERSSMQLRASTGGDFRISVSSTPSCSSAG 215

Query: 244 SCHEDFDGLGDVFIWGEGLGNGLL-GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIA 302
           S  +D + LGDV+IWGE   +G+   G+V+ V      + D L PK LES VVLD   I+
Sbjct: 216 SGPDDIESLGDVYIWGEIWSDGVFPDGSVSSVPT----KNDVLTPKPLESNVVLDVHQIS 271

Query: 303 CGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCA 362
           CG +H  LVT+QG++F+WGE SGG+LGHG+E   ++PKL+++L  +NI  VACGE+HTCA
Sbjct: 272 CGVRHVALVTRQGEVFTWGEESGGRLGHGIEDHFTHPKLVESLAVTNIDYVACGEYHTCA 331

Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
           ++ SGDL+TWGDG +N GLLG  +++SHWIP++VSG +EGLQ+ SI CG WH+A  TS G
Sbjct: 332 ISTSGDLFTWGDGSNNSGLLGHGTDVSHWIPKRVSGPLEGLQVLSIACGTWHSALATSNG 391

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           KLFTFGDGTFGALGHGDR S S P+E+++L  LKT+  +CGVWHTAAIVEV  + SGSN 
Sbjct: 392 KLFTFGDGTFGALGHGDRKSVSSPKELQSLNGLKTIKVACGVWHTAAIVEVMSQ-SGSN- 449

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
           +SS+KLFTWGDG + +LGHG+ +  ++P CV    D +F ++ACGH++T+ALT +G VF+
Sbjct: 450 ISSRKLFTWGDGDKHRLGHGNKDAYLLPTCVSSLIDYNFQQLACGHTMTVALTTSGHVFT 509

Query: 543 MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
           MG + YGQLG+P S GK P  ++  +   ++E+I+CG+YH AV++S+SEV+TWG+GANGQ
Sbjct: 510 MGGSAYGQLGNPSSNGKIPCLVQDRLVGEFVEEISCGAYHTAVLTSRSEVFTWGRGANGQ 569

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFR 662
           LGHGD E+++ PTLVEAL+++ VK++ CG+NFT++IC+HK VS AD S+CSGCR  F F 
Sbjct: 570 LGHGDTEDRKLPTLVEALKERHVKNLSCGANFTSSICIHKWVSGADQSVCSGCRQAFGFT 629

Query: 663 RRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQI--- 719
           R+RHNCYNCGLV+C  CSSKK+MK ALAP   KP+RVCD C+ KL   +ESG+ S I   
Sbjct: 630 RKRHNCYNCGLVHCHNCSSKKAMKAALAPTPGKPHRVCDSCYAKLK-AAESGNTSAINRK 688

Query: 720 ---PRNSSGLFQNCKR------------VTEK-ENMNSRSATDGQSKPKGKSYHAS---- 759
              PR S  + +  +R             TE  + +  +S   G          AS    
Sbjct: 689 TTVPRRSMDIREKMERGEPRFSRILLSPTTEPIKYLEIKSGKQGAQSEAASIVRASQVPS 748

Query: 760 ---------PSLNGKFQ--WEPNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSIT 808
                    PS     Q  W+P    +    +++S P +   SR  SP SR+ SP  S +
Sbjct: 749 LLPLKDVAFPSSPSTLQNAWKPAPPIVPQLTVNSSQPAAN--SRPSSPYSRRPSPPRSAS 806

Query: 809 MNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETT 868
                    S  + +  K+TN+ F Q+   ++ Q++ L +K    E+E+     + K   
Sbjct: 807 P------GFSRGVIDSLKKTNEIFKQDMTKMQNQIKTLKKKCDNQELEIHNLENRAKGAA 860

Query: 869 QIAQEEAEKNKAAQEVIRSLTAQAR 893
           ++A  E+ K+  A E  +S+T + +
Sbjct: 861 KLAAAESSKSNIAMEFAKSITKELK 885


>gi|358345377|ref|XP_003636756.1| Chromosome condensation regulator protein [Medicago truncatula]
 gi|355502691|gb|AES83894.1| Chromosome condensation regulator protein [Medicago truncatula]
          Length = 1170

 Score =  775 bits (2000), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/904 (46%), Positives = 575/904 (63%), Gaps = 74/904 (8%)

Query: 17  AVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPGQRTA 76
           A+  LKKG  LLKYGR+GKPKFCPFRLS D   LIW +   EK+LKLS VSRIIPGQRTA
Sbjct: 87  ALIALKKGAQLLKYGRKGKPKFCPFRLSPDGSSLIWISSGGEKKLKLSSVSRIIPGQRTA 146

Query: 77  VFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCKSRSDSI 134
           VFQRY +PEK+Y SFSLIY N  RSLDLICKDK EA++W + L+ LIS     +S+ D  
Sbjct: 147 VFQRYLRPEKDYVSFSLIYNNGKRSLDLICKDKVEADVWISGLKKLISSGQGGRSKIDGW 206

Query: 135 SS-----DSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVL 189
           S      D  +  T  +     +S S D+++ D   + P        P N L        
Sbjct: 207 SDGGLNLDDSKDLTSNSPSGSSASASLDISSPDISVSLPSTSPNSYRPDNTLN------- 259

Query: 190 SFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDF 249
               + +++ R+ES +  +             + S  D+ R+S+SSA  +SS GS  +D+
Sbjct: 260 ----SERSHARSESTNMQI-------------KGSGTDTVRVSVSSA--TSSHGSAPDDY 300

Query: 250 DGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAV 309
           D L DV+IWGE +   +  GA   V      R D LLP+ LES VVLD Q IACG +HA 
Sbjct: 301 DALADVYIWGEIICENIKVGADKSVHF--CPRADVLLPRPLESNVVLDVQHIACGVRHAS 358

Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
           LVT+QG++F+WGE SGG+LGHGV  +V  P+L++AL  + +  VACGEFH+CAVT++G+L
Sbjct: 359 LVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVEALTSTTVDFVACGEFHSCAVTMTGEL 418

Query: 370 YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
           YTWGDG HN GLLG  S  SHWIP+++ G ++GLQ+S + CGPWHTA ITS GK      
Sbjct: 419 YTWGDGTHNAGLLGHGSNASHWIPKRIGGPLDGLQVSFVACGPWHTALITSTGK------ 472

Query: 430 GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
                       + S PREV++L  L+T+  +CGVWHTAA+VEV    S ++ LSS KLF
Sbjct: 473 -----------ENVSYPREVDSLLGLRTIAVACGVWHTAAVVEVIATQSIAS-LSSGKLF 520

Query: 490 TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
           TWGDG + +LGHGD E R+ P CV    D  F K+ACGHS+T+ LT TG+VF+MGS  YG
Sbjct: 521 TWGDGDKNRLGHGDKESRLNPTCVPAIIDYDFKKIACGHSLTVGLTTTGRVFTMGSTVYG 580

Query: 550 QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           QLG+P S GK P  +   I    +E+I+CG+YH+AV++SK+EVYTWGKG+NG+LGHGD E
Sbjct: 581 QLGNPQSDGKLPCLVGDKIALESVEEISCGAYHVAVLTSKNEVYTWGKGSNGRLGHGDLE 640

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCY 669
           +++TPTLVEAL+D+ VK + C SN++AAICLHK VS A+ S CS CR  F F R+RHNCY
Sbjct: 641 DRKTPTLVEALKDRHVKYIACASNYSAAICLHKWVSGAEQSQCSTCRQAFGFTRKRHNCY 700

Query: 670 NCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQ---IPR----N 722
           NCGLV+C  CSSKK+++ ALAP  +K YRVCD C+ KL+  +E+ ++++   +PR    N
Sbjct: 701 NCGLVHCHSCSSKKALRAALAPNPDKHYRVCDSCYAKLSKVAEANNSNRRNALPRLSGEN 760

Query: 723 SSGLFQNCKRVTE---KENMNSRSATDGQSKPKGKSYHA--------SPSLNGK-FQWEP 770
              L ++  RV++     NM+     D ++  +GK            +P L  K   +  
Sbjct: 761 KDRLDKSELRVSKALIPSNMDLIKQLDNKAAKQGKKSDTFSLARNSQTPLLQLKDVVFAT 820

Query: 771 NSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSIT-MNSFTDLANSEVIFEYSKQTN 829
            +D  ++       P S   +R+ SP SR+SSP  S T + + + L+ S+ I +  K+TN
Sbjct: 821 AADLRRTTPRPVIAP-SGVSTRSASPFSRRSSPPRSATPIPTMSGLSFSKNIADSLKKTN 879

Query: 830 DNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLT 889
           +  N+E   L AQ+E L  K +  E+E++R+++K +E   +A EE+ K KAA++VI+SLT
Sbjct: 880 ELLNKEVQKLHAQVESLKNKCERQELEVQRSAKKTQEAIALATEESTKCKAAKQVIKSLT 939

Query: 890 AQAR 893
           AQ +
Sbjct: 940 AQLK 943


>gi|255585556|ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223526683|gb|EEF28920.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1097

 Score =  775 bits (2000), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/925 (46%), Positives = 576/925 (62%), Gaps = 93/925 (10%)

Query: 11  ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
           +RD EQA+  LKKGT L+KY R+GKPKF  FRLS DE  LIW +  EEK L LS VSRII
Sbjct: 11  DRDIEQALVTLKKGTQLIKYSRKGKPKFRAFRLSPDETTLIWLSRGEEKILNLSSVSRII 70

Query: 71  PGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCK 128
           PGQRTAVF+R+ +PEK+Y SFSL+Y N  R+LDLICKDK EAE+W   L+ALI  +   +
Sbjct: 71  PGQRTAVFRRFLRPEKDYLSFSLLYNNGERTLDLICKDKVEAEVWLAGLKALIGRNRGRR 130

Query: 129 SRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQN-RLGKAFSE 187
           +RSD                       SDLT  D GD            QN R+  A  +
Sbjct: 131 TRSD----------------------ISDLT--DGGDFL----------QNGRISGATLD 156

Query: 188 VLSFTAAAKAYTRAESVSKSLNFVASGGLDD-ANS--RSSTADSFRISLSSAVSSSSQGS 244
           + S     +          SLN  +S    + AN   R+S  D FRIS+SS  S SS GS
Sbjct: 157 LSSSINRGRVSIDLGPRDTSLNSASSDAASERANMQLRTSGGDGFRISVSSTPSCSSGGS 216

Query: 245 CHEDFDGLGDVFIWGEGLGNGLL-GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIAC 303
             +D + LGDV++WGE   + +   G+++ V I    + D L PK LES VVLD Q IAC
Sbjct: 217 GPDDIESLGDVYLWGEVWSDAVFPDGSMSSVPI----KNDVLTPKPLESNVVLDVQQIAC 272

Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAV 363
           G +H  LVT+QG++F+WGE SGG+LGHG E D S P+L++ L  +N+  VACGE+HTCAV
Sbjct: 273 GVRHVALVTRQGEVFTWGEESGGRLGHGFETDFSCPRLVEFLAVTNVDFVACGEYHTCAV 332

Query: 364 TLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGK 423
           T SGDLYTWGDG  N GLLGQ +++SHWIP++VSG +EGLQ+ SI CG WH+A  TS GK
Sbjct: 333 TTSGDLYTWGDGTRNAGLLGQGTDVSHWIPKRVSGPLEGLQVFSIACGTWHSALATSNGK 392

Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
           LFTFGDG FG LGHGDR S S P+EV+ L  LKT+  +CGVWHTAAIVEV  + SG+N +
Sbjct: 393 LFTFGDGAFGVLGHGDRESLSFPKEVQLLSGLKTIKVACGVWHTAAIVEVMSQ-SGAN-V 450

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
           SS+KLFTWGDG + +LGHG  +  ++P CV    D +F ++ACG ++T+ALT +G VF+M
Sbjct: 451 SSRKLFTWGDGDKNRLGHGSKDTYLLPTCVSSLIDYNFHQIACGQTLTVALTTSGHVFTM 510

Query: 544 GSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           G   +GQLG+P S GK PT ++ ++   ++E+++CG++H+AV++S+SE+YTWGKGANG+L
Sbjct: 511 GGTAHGQLGNPASDGKMPTLVQDSLVGEFVEEVSCGAHHVAVLTSRSELYTWGKGANGRL 570

Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRR 663
           GHGD E+++TPTLVEAL+D+ VK++ CGSNFT +IC+HK VS AD S+CSGCR  F F R
Sbjct: 571 GHGDTEDRRTPTLVEALKDRHVKNISCGSNFTTSICIHKWVSGADQSVCSGCRQAFGFTR 630

Query: 664 RRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSN----SQI 719
           +RHNCYNCGLV+C  CSSKK++K ALAP   KP+RVCD C+ KL T+     N    +  
Sbjct: 631 KRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYAKLKTSDTGNYNINRKATT 690

Query: 720 PRNSSGLFQNCKRVTEKENMNSRSATDGQSKP----KGKSYH------------------ 757
           PR S  + +   R    E   SR+     ++P    + KS                    
Sbjct: 691 PRRSIDIREKMDR---GEANTSRTLFSPSTEPIKYLEIKSVRPGMRSEAPSIVRASQVPN 747

Query: 758 -------ASPSLNGKFQ--WEPNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSIT 808
                  A PS     Q  W+P S  +  + +++  P     SR  SP SR+ SP   I+
Sbjct: 748 LLQLKDIAFPSSLSAIQNAWKPVSSPVSLSPLNSPQPMGN--SRPASPYSRRPSPP-RIS 804

Query: 809 MNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETT 868
              F     S  + +  K+TN+    +   ++ Q++   +K    E E+++  ++  ET 
Sbjct: 805 SPGF-----SRSVIDSLKKTNEILKNDMTKVQNQMKTFKQKCDAQETEIQKLQKEANETA 859

Query: 869 QIAQEEAEKNKAAQEVIRSLTAQAR 893
             A+ EA K + A+E+++SL  Q +
Sbjct: 860 LSAKREASKCRVAKELVKSLAEQLK 884


>gi|334186523|ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332658030|gb|AEE83430.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 1106

 Score =  766 bits (1978), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/894 (45%), Positives = 566/894 (63%), Gaps = 47/894 (5%)

Query: 11  ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
           +RD +QA+  LKKGT LLKY R+G+PKF  FRLS DE  L W +  EEK LKL+ VSRI+
Sbjct: 16  DRDIDQALVSLKKGTQLLKYSRKGRPKFRSFRLSPDETTLFWLSHGEEKGLKLATVSRIL 75

Query: 71  PGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCK 128
           PGQRTAVF+RY +PEK+Y SFSLIY N  RSLDLICKDK E E+WF  L++LI ++   +
Sbjct: 76  PGQRTAVFRRYLRPEKDYLSFSLIYHNGDRSLDLICKDKAETEVWFAGLKSLIRQNRNKQ 135

Query: 129 SRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEV 188
           ++S+        S          +SI     N   G T  I +  +NSP           
Sbjct: 136 AKSEIPEVSIHDSDCFSTGRPSTASIDFAPNNTRRGRTS-IDLGIQNSPTK--------- 185

Query: 189 LSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHED 248
             F ++   Y R   +                 R ST D FRIS+SS  S S+  S  +D
Sbjct: 186 --FGSSDVGYERGNML-----------------RPST-DGFRISVSSTPSCSTGTSGPDD 225

Query: 249 FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            + LGDV++WGE   +G+   + +GV  S+  + D L+PK LES VVLD   IACG +H 
Sbjct: 226 IESLGDVYVWGEVWSDGI---SPDGVVNSTTVKIDVLIPKPLESNVVLDVHQIACGVRHI 282

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
            LVT+QG++F+W E +GG+LGHG++ DV  PKL++ L  +NI  VACGE+HTCAV+ SGD
Sbjct: 283 ALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEYHTCAVSTSGD 342

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           L+TWGDGIHN+GLLG  S++SHWIP++VSG +EGLQ+ S+ CG WH+A  T+ GKLFTFG
Sbjct: 343 LFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSALATANGKLFTFG 402

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           DG FG LGHGDR S S P+EV+ L  LKT+  +CGVWHT AIVEV  +T  S   SS+KL
Sbjct: 403 DGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGTST--SSRKL 460

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           FTWGDG + +LGHG+ E  ++P CV    D +F ++ACGH+ T+ALT +G VF+MG   +
Sbjct: 461 FTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGHVFTMGGTSH 520

Query: 549 GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           GQLGS  S GK P  ++  +   ++E+I+CG +H+AV++S+SEV+TWGKG+NG+LGHGD 
Sbjct: 521 GQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDK 580

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNC 668
           ++++TPTLVEALR++ VKS+ CGSNFT++IC+HK VS AD S+CSGCR  F F R+RHNC
Sbjct: 581 DDRKTPTLVEALRERHVKSISCGSNFTSSICIHKWVSGADQSVCSGCRQAFGFTRKRHNC 640

Query: 669 YNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIP-RNSSGLF 727
           YNCGLV+C  CSSKK++K ALAP   KP+RVCD C+ KL    ESG NS +  RNS+   
Sbjct: 641 YNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYTKLK-AGESGYNSNVANRNSTTPT 699

Query: 728 QNCKRV--TEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNKISASPP 785
           ++       +++  +SR     +++P   S   S               ++  +  A P 
Sbjct: 700 RSLDGTGRPDRDIRSSRILLSPKTEPVKYSEVRSSRSESSIVRASQVPALQQLRDVAFPS 759

Query: 786 GSRRVSRAPSPISRKSS---PACSITMNSFTDLAN---SEVIFEYSKQTNDNFNQEPDVL 839
               +  A  P++  S+   P+ + +    +   +   S  + +  K++N   N+E   L
Sbjct: 760 SLSAIQNAFKPVASSSTSTLPSGTRSSRISSPPRSSGFSRGMIDTLKKSNGVINKEMTKL 819

Query: 840 RAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
           ++Q+++L  K      E++R  +  +E + +A + + K+KAA EV++S+    R
Sbjct: 820 QSQIKNLKEKCDNQGTEIQRLKKTAREASDLAVKHSSKHKAATEVMKSVAEHLR 873


>gi|7939537|dbj|BAA95740.1| chromosome condensation regulator-like protein protein [Arabidopsis
           thaliana]
          Length = 1067

 Score =  763 bits (1970), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/916 (45%), Positives = 569/916 (62%), Gaps = 80/916 (8%)

Query: 8   ILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVS 67
           I  ERD +QA+ VLKKGT LLKY R+GKPKF  FRLS DEK LIW++  EEK LKL  VS
Sbjct: 14  IYHERDVDQALVVLKKGTQLLKYSRKGKPKFRAFRLSPDEKTLIWFSRGEEKGLKLFEVS 73

Query: 68  RIIPGQRTAVFQRYPQPEKEYQSFSLIY--RNRSLDLICKDKDEAELWFTALRALISEDN 125
           RI+PGQRTAVF+R+ +PEK++ SFSL+Y  R RSLDLICKDK E E+WF AL+ LI    
Sbjct: 74  RIVPGQRTAVFKRFLRPEKDHLSFSLLYNNRERSLDLICKDKAETEVWFAALKFLIE--- 130

Query: 126 RCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAF 185
             KSR+    S+ P  H          SI    +N   G T  I + Y+N+         
Sbjct: 131 --KSRNRRARSEIPEIHDSDTFSVGRQSIDFVPSNIPRGRTS-IDLGYQNN--------- 178

Query: 186 SEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSC 245
           S+V                          G +  N    + D FRIS+SS  S SS GS 
Sbjct: 179 SDV--------------------------GYERGNMLRPSTDGFRISVSSTPSCSSGGSG 212

Query: 246 HEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGS 305
            +D + LGDV++WGE    G+L    +G   +   + D L P+ LES VVLD   I CG 
Sbjct: 213 PDDIESLGDVYVWGEVWTEGILP---DGTASNETVKTDVLTPRPLESNVVLDVHQIVCGV 269

Query: 306 KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTL 365
           +H  LVT+QG++F+WGE  GG+LGHG++ D+S PKL++ L  +NI  VACGE+HTC V+ 
Sbjct: 270 RHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHTCVVST 329

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
           SGDL++WGDGIHN+GLLG  S+ISHWIP++VSG +EGLQ+ S+ CG WH+A  T+ GKLF
Sbjct: 330 SGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLF 389

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
           TFGDG FG LGHG+R S S P+EV++L  LKTV  +C +WHTAAIVEV G+T+ S  +SS
Sbjct: 390 TFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATS--MSS 447

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
           +KLFTWGDG + +LGHG+ E  ++P CV    D +F K+ACGH+ T+ALT +G VF+MG 
Sbjct: 448 RKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGG 507

Query: 546 ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
             +GQLG+  S GK P  ++  +   ++E+IACG++H+AV++S+SEV+TWGKGANG+LGH
Sbjct: 508 TAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGH 567

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRR 665
           GD E+K+TPTLVEALRD+ VKS+ CGSNFT++IC+HK VS AD SICSGCR  F F R+R
Sbjct: 568 GDTEDKRTPTLVEALRDRHVKSLSCGSNFTSSICIHKWVSGADQSICSGCRQAFGFTRKR 627

Query: 666 HNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRN--S 723
           HNCYNCGLV+C  CSSKK++K ALAP   KP+RVCD C+ KL   +ESG +S + RN  +
Sbjct: 628 HNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYSKLK-AAESGYSSNVNRNVAT 686

Query: 724 SGLFQNCKRVTEKENMNSR----SATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNK 779
            G   +    T++E   S     SA         +      S N +    P+   ++  K
Sbjct: 687 PGRSIDGSVRTDRETTRSSKVLLSANKNSVMSSSRPGFTPESSNARASQVPS---LQQLK 743

Query: 780 ISASPPGSRRVSRAPSP-ISRKSSPACSITMN--------------SFTDLANSEVIFEY 824
             A P     +  A  P ++  ++P  ++ +                +    +      +
Sbjct: 744 DIAFPSSLSAIQNAFKPVVAPTTTPPRTLVIGPSSPSPPPPPRSSSPYARRPSPPRTSGF 803

Query: 825 SKQTNDNFNQEPDVL-------RAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEK 877
           S+   D+  +  +V+        +Q+++L ++      E+ER  +  K+ +++A  ++ K
Sbjct: 804 SRSVIDSLRKTNEVMNQEMTKLHSQVKNLKQRCNNQGTEIERFQKAAKDASELAARQSSK 863

Query: 878 NKAAQEVIRSLTAQAR 893
           +KAA E ++S+  Q +
Sbjct: 864 HKAATEALKSVAEQLK 879


>gi|449446720|ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
          Length = 1075

 Score =  761 bits (1965), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/921 (44%), Positives = 574/921 (62%), Gaps = 88/921 (9%)

Query: 11  ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
           ERD EQA+  LKKGT L+KY R+GKPK CPFR+S+DE  LIWY+  EE+ LKLS +SRII
Sbjct: 11  ERDFEQALIALKKGTQLIKYSRKGKPKLCPFRISTDETTLIWYSHGEERTLKLSSISRII 70

Query: 71  PGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCK 128
           PGQRTAVF+RY +PEK+Y SFSL+YRN  RSLDLICKDK EAE+WF  L+ LIS      
Sbjct: 71  PGQRTAVFRRYLRPEKDYLSFSLLYRNGERSLDLICKDKGEAEVWFLGLKNLIS------ 124

Query: 129 SRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEV 188
                     PR H  +             +  D  D Q     +++S      + F   
Sbjct: 125 ----------PRQHHGR-------------SRSDFSDVQDANEFFQSS------RPFGAT 155

Query: 189 LSFT---AAAKAYTRAESVSKSLNFVASG-GLDDANS--RSSTADSFRISLSSAVSSSSQ 242
           L F+   A  +      S    L+ V+S  G + AN   R+S  D FR S+SS  S SS 
Sbjct: 156 LEFSNSLARGRDSIDLNSRESHLHLVSSDVGSERANMQLRTSGGDGFRSSVSSTPSCSSG 215

Query: 243 GSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIA 302
           GS  +D + LGDV++WGE   + +L    +G       + D L PK LE+ VVLD Q IA
Sbjct: 216 GSGPDDIESLGDVYVWGEIWTDLVLP---DGTSSQIPVKNDVLTPKPLETNVVLDVQQIA 272

Query: 303 CGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCA 362
           CG +H  LVT+QG++F+WGE  GG+LGHG++ D S P L++ L  S++  VACGE+HTCA
Sbjct: 273 CGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGEYHTCA 332

Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
           +T S DLYTWGDGI N G+LG  ++ISHWIP++V G +EGLQ+ S+ CG WH+A  TS G
Sbjct: 333 ITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHSALATSNG 392

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           KL+TFGDGT+G LGHGDR S   PREV+ L  L+T+  +CGVWHTAAIVEV  +T GSN 
Sbjct: 393 KLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLRTIKVACGVWHTAAIVEVMSQT-GSN- 450

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
           +SS+KLFTWGDG + +LGHG+ E  ++P CV    D +F ++ACGH++T+ALT +G VF+
Sbjct: 451 MSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACGHNMTVALTTSGHVFT 510

Query: 543 MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
           MG   YGQLG+P S G  P  ++  +   ++E+I+CG+YH  V++S++EV++WG+G+NG+
Sbjct: 511 MGGTAYGQLGNPSSDGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVFSWGRGSNGR 570

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFR 662
           LGHGD E+++ PTL+EAL+D+ VKS+ CGSNFTA+IC+HK VS AD S+C+GCR  F F 
Sbjct: 571 LGHGDVEDRKAPTLIEALKDRHVKSISCGSNFTASICIHKWVSGADQSVCTGCRQAFGFT 630

Query: 663 RRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRN 722
           R+RHNCYNCGLV+C  CSSKK++K ALAP   KP+RVCD C+ KL  ++E+G+N  + R 
Sbjct: 631 RKRHNCYNCGLVHCHSCSSKKALKAALAPTPGKPHRVCDSCYAKLK-SAEAGNNFCVNRK 689

Query: 723 SSGLFQNCKRVTEKENMN------SRSATDGQSKP---------KGKSYHASPSLNGKFQ 767
              L  N +    KE  +      SR      ++P         +  S   SPS+    Q
Sbjct: 690 ---LTANRRSTDYKERFDRGDVRPSRILLSPTTEPVKYHEIKSVRPGSRPTSPSMVRASQ 746

Query: 768 ---WEPNSDFIKSNKISA----------SPPGSRRV--SRAPSPISRKSSPACSITMNSF 812
               +   D    + +SA          +PP    +  SR  SP +R+ SP  S T    
Sbjct: 747 VPSLQQLKDIAFPSSLSAIQNALRPALVAPPSPPPMGNSRPASPYARRPSPPRSTTP--- 803

Query: 813 TDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQ 872
                S+ + +  K++N+   Q+   L+ ++++L +K      E++   +   E   + +
Sbjct: 804 ---VFSKSVIDSLKKSNETLVQDKSKLQREVKNLKQKCDIQGAEIQNLQKNATEAASLVE 860

Query: 873 EEAEKNKAAQEVIRSLTAQAR 893
           EE+ K K A++++ ++T Q +
Sbjct: 861 EESSKCKIAKKLVTTITEQLK 881


>gi|15229409|ref|NP_188968.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332643224|gb|AEE76745.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1045

 Score =  749 bits (1935), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/911 (45%), Positives = 562/911 (61%), Gaps = 79/911 (8%)

Query: 8   ILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVS 67
           I  ERD +QA+ VLKKGT LLKY R+GKPKF  FRLS DEK LIW++  EEK LKL  VS
Sbjct: 9   IYHERDVDQALVVLKKGTQLLKYSRKGKPKFRAFRLSPDEKTLIWFSRGEEKGLKLFEVS 68

Query: 68  RIIPGQRTAVFQRYPQPEKEYQSFSLIY--RNRSLDLICKDKDEAELWFTALRALISEDN 125
           RI+PGQRT    R+ +PEK++ SFSL+Y  R RSLDLICKDK E E+WF AL+ LI    
Sbjct: 69  RIVPGQRT----RFLRPEKDHLSFSLLYNNRERSLDLICKDKAETEVWFAALKFLIE--- 121

Query: 126 RCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAF 185
             KSR+    S+ P  H          SI    +N   G T  I + Y+N+         
Sbjct: 122 --KSRNRRARSEIPEIHDSDTFSVGRQSIDFVPSNIPRGRTS-IDLGYQNN--------- 169

Query: 186 SEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSC 245
           S+V                          G +  N    + D FRIS+SS  S SS GS 
Sbjct: 170 SDV--------------------------GYERGNMLRPSTDGFRISVSSTPSCSSGGSG 203

Query: 246 HEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGS 305
            +D + LGDV++WGE    G+L    +G   +   + D L P+ LES VVLD   I CG 
Sbjct: 204 PDDIESLGDVYVWGEVWTEGILP---DGTASNETVKTDVLTPRPLESNVVLDVHQIVCGV 260

Query: 306 KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTL 365
           +H  LVT+QG++F+WGE  GG+LGHG++ D+S PKL++ L  +NI  VACGE+HTC V+ 
Sbjct: 261 RHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHTCVVST 320

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
           SGDL++WGDGIHN+GLLG  S+ISHWIP++VSG +EGLQ+ S+ CG WH+A  T+ GKLF
Sbjct: 321 SGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLF 380

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
           TFGDG FG LGHG+R S S P+EV++L  LKTV  +C +WHTAAIVEV G+T+ S  +SS
Sbjct: 381 TFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTATS--MSS 438

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
           +KLFTWGDG + +LGHG+ E  ++P CV    D +F K+ACGH+ T+ALT +G VF+MG 
Sbjct: 439 RKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGG 498

Query: 546 ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
             +GQLG+  S GK P  ++  +   ++E+IACG++H+AV++S+SEV+TWGKGANG+LGH
Sbjct: 499 TAHGQLGNSISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGH 558

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRR 665
           GD E+K+TPTLVEALRD+ VKS+ CGSNFT++IC+HK VS AD SICSGCR  F F R+R
Sbjct: 559 GDTEDKRTPTLVEALRDRHVKSLSCGSNFTSSICIHKWVSGADQSICSGCRQAFGFTRKR 618

Query: 666 HNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRN--S 723
           HNCYNCGLV+C  CSSKK++K ALAP   KP+RVCD C+ KL   +ESG +S + RN  +
Sbjct: 619 HNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYSKLK-AAESGYSSNVNRNVAT 677

Query: 724 SGLFQNCKRVTEKENMNSR----SATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNK 779
            G   +    T++E   S     SA         +      S N +    P+   ++  K
Sbjct: 678 PGRSIDGSVRTDRETTRSSKVLLSANKNSVMSSSRPGFTPESSNARASQVPS---LQQLK 734

Query: 780 ISASPPGSRRVSRAPSP-ISRKSSPACSITMN--------------SFTDLANSEVIFEY 824
             A P     +  A  P ++  ++P  ++ +                +    +      +
Sbjct: 735 DIAFPSSLSAIQNAFKPVVAPTTTPPRTLVIGPSSPSPPPPPRSSSPYARRPSPPRTSGF 794

Query: 825 SKQTNDNFNQEPDVLRAQLEDL--TRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQ 882
           S+   D+  +  +V+  ++  L   ++      E+ER  +  K+ +++A  ++ K+KAA 
Sbjct: 795 SRSVIDSLRKTNEVMNQEMTKLHSQQRCNNQGTEIERFQKAAKDASELAARQSSKHKAAT 854

Query: 883 EVIRSLTAQAR 893
           E ++S+  Q +
Sbjct: 855 EALKSVAEQLK 865


>gi|297831070|ref|XP_002883417.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297329257|gb|EFH59676.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1043

 Score =  747 bits (1929), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 420/924 (45%), Positives = 563/924 (60%), Gaps = 111/924 (12%)

Query: 11  ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
           ERD +QA+ VLKKGT LLKY R+GKPKF  FRLS DEK LIW++  EEK LKL  VSRI+
Sbjct: 12  ERDIDQALVVLKKGTQLLKYSRKGKPKFRAFRLSPDEKTLIWFSRGEEKGLKLFEVSRIV 71

Query: 71  PGQRTAVFQRYPQPEKEYQSFSLIY--RNRSLDLICKDKDEAELWFTALRALISEDNRCK 128
           PGQRT    R+ +PEK++ SFSL+Y  R RSLDLICKDK E E+WF  L+ LI      K
Sbjct: 72  PGQRT----RFLRPEKDHLSFSLLYNNRERSLDLICKDKAETEVWFAGLKFLIE-----K 122

Query: 129 SRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEV 188
           SR+    S+ P  H          SI     N   G T  I + Y+N+         S+V
Sbjct: 123 SRNRRARSEIPEIHDSDTFSVGRQSIDFVPNNIPRGRTS-IDLGYQNN---------SDV 172

Query: 189 LSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHED 248
                                     G +  N    + D FRIS+SS  S SS GS  +D
Sbjct: 173 --------------------------GYERGNMLRPSTDGFRISVSSTPSCSSGGSGPDD 206

Query: 249 FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            + LGDV++WGE    G+L    +G       + D L P+ LES VVLD   I CG +H 
Sbjct: 207 IESLGDVYVWGEVWTEGILP---DGTVSKETVKTDVLTPRPLESNVVLDVHQIVCGVRHV 263

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
            LVT+QG++F+WGE  GG+LGHG++ D+S PKL++ L  +NI  VACGE+HTC V+ SGD
Sbjct: 264 ALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHTCVVSTSGD 323

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           L++WGDGIHN+GLLG  S+ISHWIP++VSG +EGLQ+ S+ CG WH+A  T+ GKLFTFG
Sbjct: 324 LFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATANGKLFTFG 383

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           DG FG LGHG+R S S P+EV++L  LKTV  +C +WHTAAIVEV G+T  S  +SS+KL
Sbjct: 384 DGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTGTS--MSSRKL 441

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           FTWGDG + +LGHG+ E  ++P CV    D +F K+ACGH+ T+ALT +G VF+MG   +
Sbjct: 442 FTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVFTMGGTAH 501

Query: 549 GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           GQLG+  S GK P  ++  +   ++E+IACG +H+AV++S+SEV+TWGKGANG+LGHGD 
Sbjct: 502 GQLGNSISDGKLPCLVQDRLVGEFVEEIACGDHHVAVLTSRSEVFTWGKGANGRLGHGDT 561

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNC 668
           E+K+TPT VEALRD+ VKS+ CGSNFT++IC+HK VS AD SICSGCR  F F R+RHNC
Sbjct: 562 EDKRTPTCVEALRDRHVKSLSCGSNFTSSICIHKWVSGADQSICSGCRQAFGFTRKRHNC 621

Query: 669 YNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRNSS---- 724
           YNCGLV+C  CSSKK++K ALAP   KP+RVCD C+ KL   +ESG +S + RN +    
Sbjct: 622 YNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYSKLK-AAESGYSSNVNRNVATPGR 680

Query: 725 ---GLFQNCKRVTEKE------NMNS-RSATDGQSKPKGKSYHAS--PSLNGKFQWEPNS 772
              G  ++ K  T         N NS RS++     P   +  AS  PSL      +   
Sbjct: 681 SIDGSVRSDKETTRSSKVLLSANTNSVRSSSRPGLTPDSSNARASQVPSL------QQLK 734

Query: 773 DFIKSNKISASPPGSRRV----SRAPSPI-------------------SRKSSPACSITM 809
           D    + +SA     + V    +  P P+                   +R++SP  +   
Sbjct: 735 DIAFPSSLSAIQNAFKPVIAPTTTPPRPLVVGPSSPSPPPPPRSSSPYARRTSPPRTSGF 794

Query: 810 NSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQ 869
                   S  + +  K+TN+  NQE   L++Q     ++      E+ER  +  K+  +
Sbjct: 795 --------SRSVIDSLKKTNEVMNQEMTKLQSQ-----QRCNNQGTEIERFQKAAKDAFE 841

Query: 870 IAQEEAEKNKAAQEVIRSLTAQAR 893
           +A +++ K+KAA E ++S+  Q +
Sbjct: 842 LAAKQSSKHKAATEALKSVAEQLK 865


>gi|357128620|ref|XP_003565969.1| PREDICTED: uncharacterized protein LOC100827763 [Brachypodium
           distachyon]
          Length = 1007

 Score =  746 bits (1927), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/890 (45%), Positives = 572/890 (64%), Gaps = 64/890 (7%)

Query: 15  EQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPGQR 74
           + ++  LKKG+ L+KY R+GKPK   FRLSSDE +L+WY+  +EK LKLS VS+IIPGQR
Sbjct: 5   DNSIITLKKGSKLIKYSRKGKPKIREFRLSSDETILVWYSKHKEKCLKLSAVSKIIPGQR 64

Query: 75  TAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCKSRSD 132
           TAVF+R+ +PEK+Y SFSLIY+N  RSLDL+CKD+ E E+WF+ L  LI+       +SD
Sbjct: 65  TAVFRRFLRPEKDYLSFSLIYKNGQRSLDLVCKDQAEVEVWFSTLETLITSCRVTDCQSD 124

Query: 133 SIS-SDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLSF 191
            +S SD    +   N       I+S +T                              +F
Sbjct: 125 RVSFSDEVTQYQDSNLYGTTVDIASSITR-----------------------------TF 155

Query: 192 TAAAKAYTRAESVSKSLNFVASGGLDDANS-RSSTADSFRISLSSAVSSSS-QGSCHEDF 249
            +A   Y+ A S++ S    A  G D AN  R ST DS RIS+SS++ SSS QGS  +D 
Sbjct: 156 NSAG--YSTANSLNSSR---ADVGSDRANMLRVSTGDSSRISISSSIPSSSSQGSGPDDI 210

Query: 250 DGLGDVFIWGEGLGNGLLG-GAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           + LGDV++WGE   + +   G+ N V      + D L+PK LES VVLD Q I+CGS+H 
Sbjct: 211 ESLGDVYVWGEVWTDVIPSEGSSNLV----CSKTDVLIPKPLESDVVLDVQQISCGSRHI 266

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
            L T+QG++F+WGE  GG+LGHG + D+S PKL+++L  SN+  +ACGEFHTCAVT SGD
Sbjct: 267 ALTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVSNVEYIACGEFHTCAVTASGD 326

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           LY WGDG +N GLLG     SHW+P++VSG +EGLQ+ S+ CG WH+A   S+GK+FTFG
Sbjct: 327 LYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVLSVACGSWHSALAMSSGKVFTFG 386

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           DGTFGALGHG+R + + P+EVE+L   +T+  +CGVWH+AAIVE   +T G N + S+KL
Sbjct: 387 DGTFGALGHGNRENVAYPKEVESLSGFRTMKVACGVWHSAAIVETTSQT-GVN-MVSRKL 444

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           FTWGDG + +LGHGD E R+VP  V+   D +F +VACG+S+TIAL  +G VF+MGS++Y
Sbjct: 445 FTWGDGDKNRLGHGDKEARLVPTVVQALVDNNFHQVACGYSMTIALATSGHVFTMGSSNY 504

Query: 549 GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           GQLG+P + GK P +++  +    +E+I+CGSYH+AV++S+SEVYTWG GANG+LGHG  
Sbjct: 505 GQLGNPKADGKQPCQVQDKLSSELVEEISCGSYHVAVLTSRSEVYTWGMGANGRLGHGGI 564

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNC 668
           E+K+ PT+V+AL+D+ VKS+ CGSNFT  IC+HK VS AD S+CSGCR  F F R+RHNC
Sbjct: 565 EDKKKPTIVDALKDRHVKSIACGSNFTTCICIHKWVSGADQSVCSGCRQPFGFTRKRHNC 624

Query: 669 YNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRNSSGLFQ 728
           YNCGLV+C  CSS+K +K ALAP   KP+RVCD CF+KL   ++SGSNS  P N   +  
Sbjct: 625 YNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFMKLK-AADSGSNS--PYNKKSVIT 681

Query: 729 ----NCKRVTEKENMN-SRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNKISAS 783
               + K  +E+ ++  SR AT   ++P    +  + S+    + +P +         A 
Sbjct: 682 RRSVDIKEKSERPDIRPSRLATAAPAEP--MKHADTKSVRNDVKPDPTT--------MAR 731

Query: 784 PPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQL 843
            P +  V    SP   K S     T++     ++++   +  K+T +  NQE   L+ Q+
Sbjct: 732 APQALSVPTTVSPAQPKKSNPSPATVSPLAIKSDTKSDTDGMKKTIETLNQELSKLQTQV 791

Query: 844 EDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
             L +K +  + +L+++ ++ K    +A EE+ +  A  + +R L ++ +
Sbjct: 792 TKLKQKCEVQDEQLQKSEKRAKSAASLASEESARRNAVLDFVRFLDSELK 841


>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1044

 Score =  743 bits (1918), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/891 (46%), Positives = 574/891 (64%), Gaps = 63/891 (7%)

Query: 15  EQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPGQR 74
           E A+  LKKGT L+KY RRGKPK   FRLSSDE  LIW++ K+EK L+LS V++IIPGQR
Sbjct: 5   ETALITLKKGTKLIKYSRRGKPKIRAFRLSSDETSLIWFSHKKEKFLRLSSVTKIIPGQR 64

Query: 75  TAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCKSRSD 132
           TAVF R+  PEK+Y SFSLI++N  RSLDL+CKD+ E E+WF+AL  LIS       R  
Sbjct: 65  TAVFGRFLHPEKDYLSFSLIFKNGQRSLDLVCKDQAEVEVWFSALEGLISS-----FRKK 119

Query: 133 SISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLSFT 192
           S+ ++    H  + S S   +   D  + DS                 L  A +   SF 
Sbjct: 120 SLINE----HKDRVSFSEEVTYYQDRHSYDS----------------TLDIASNISRSFN 159

Query: 193 AAAKAYTRAESVSKSLNFVASGGLDDANS-RSSTADSFRISLSSAVSSSSQGSCHEDFDG 251
           +A    T + S  KS       G D  N  R+S ADS R+S+SSA+SS SQGS  +D + 
Sbjct: 160 SAGYCGTNSFSFRKS-----DVGFDRLNMIRTSAADSSRVSISSALSSYSQGSGTDDIES 214

Query: 252 LGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           LGDV++WGE   +       +G   SS  + D L+PK LES VVLD   IACG++H  L 
Sbjct: 215 LGDVYVWGEVWTDVT---PSDGHTSSSCSKVDVLIPKPLESDVVLDVNQIACGTRHVALT 271

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           T+QG++F+WGE  GG+LGHG +AD+S PKL+++L+ + + +++CGEFHTCAVT SGDL+ 
Sbjct: 272 TRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTTSGDLFN 331

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WGDG +N+GLLG  +E+S+W+P+KVSG +EGLQ+ S+ CG WH+A  TS+GKL+TFGDGT
Sbjct: 332 WGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLYTFGDGT 391

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           FG LGHGDR + + P+EVE L   KT+  +CG+WH+AAIVEV  +T G+N + SKKL+TW
Sbjct: 392 FGVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAIVEVTNQT-GANVM-SKKLYTW 449

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           GDG + +LGHGD EPR+VP CV+   + +F ++ACGH++T+AL  +G+VF+MGS+  GQL
Sbjct: 450 GDGDKNRLGHGDKEPRLVPKCVQALLEYNFHQLACGHNMTVALATSGRVFTMGSSSNGQL 509

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
           G+P S GK P  ++  +    +E+I+CG+ H+ V++S+SEVYTWG GANG+LGHGD +++
Sbjct: 510 GNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGDLKDR 569

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNC 671
           + P LVEAL+D+ VKS+ CGSNFT  IC+HK VS AD S+C+GCR  F F R+RH+CYNC
Sbjct: 570 KKPCLVEALKDRHVKSISCGSNFTTCICIHKWVSGADQSVCTGCRQAFGFTRKRHDCYNC 629

Query: 672 GLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRNSSGL--FQN 729
           GLV+C  CSS+K +K ALAP   KP+RVCD CF+KL   +E+GSN+   RN+        
Sbjct: 630 GLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFLKLK-AAETGSNNSNRRNAVTRRSIDG 688

Query: 730 CKRVTEKENMNSRSATDGQS------KPKGKSYHASPSLNGKFQWEPNSDFIKSNKISAS 783
            +++   E   SR+    +S      K       AS  ++   Q++  S F      + S
Sbjct: 689 REKLERPEIRPSRTTAPAESVKYTEVKAARNDMRAS-QISSLLQFKDLS-FSALQPTAMS 746

Query: 784 P-----PGSRRVSRAPSPISRKS-SPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPD 837
           P     P    +S  PSP ++K+ SPA +I     TD+ N +       ++N+  NQE  
Sbjct: 747 PAVTMSPAVPALS-TPSPYTKKTKSPAPAIPQFPKTDIDNLQ-------KSNELLNQEML 798

Query: 838 VLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSL 888
            L++Q++ L +K +    +L+ + +K K    +A EE  +  A  E ++ L
Sbjct: 799 KLQSQVDSLKQKCEAQHEQLQISDKKTKTVVSMATEEYTRCSAVVEFVKFL 849


>gi|357506539|ref|XP_003623558.1| Chromosome condensation regulator-like protein [Medicago
           truncatula]
 gi|355498573|gb|AES79776.1| Chromosome condensation regulator-like protein [Medicago
           truncatula]
          Length = 1108

 Score =  741 bits (1913), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/935 (44%), Positives = 578/935 (61%), Gaps = 102/935 (10%)

Query: 1   MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ 60
           MA    N  +ERD EQA+ VLKKG+ L+KY R+ KPK  PFRLS DE  LIW + K+E+ 
Sbjct: 1   MADPASNGGLERDIEQALVVLKKGSQLIKYCRKAKPKVRPFRLSLDETTLIWISHKKERT 60

Query: 61  LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALR 118
           LKLS VSRIIPGQRT VF+RY QPEK+Y SFSL+Y N  R+LDLICKDK EAE+WF  L+
Sbjct: 61  LKLSSVSRIIPGQRTVVFRRYLQPEKDYLSFSLVYNNGERTLDLICKDKAEAEVWFAGLK 120

Query: 119 ALISEDNRCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENS-- 176
           ALIS                                 S LT  +S        +YE    
Sbjct: 121 ALISTGRH-----------------------------SRLTRSES--------SYEGVDI 143

Query: 177 -PQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASG-GLDDAN--SRSSTADSFRIS 232
            P  R   A  E+ +  A  +  T +     SL F     GLD  N   R+S  D FRIS
Sbjct: 144 IPNGRPFGAVLEISTSIARGRVSTDSLPCESSLYFANPDVGLDRTNMQGRTSVGDGFRIS 203

Query: 233 LSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLES 292
           +SS  S SS GS  +D + LGDV+IWGE   + +     NG +  S    D L+PK LES
Sbjct: 204 VSSTPSVSSLGSGPDDIESLGDVYIWGEVWADAVAPDG-NGTQFPSTT--DVLVPKPLES 260

Query: 293 TVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM 352
           +VVLD   IA G +H  LVT+QG++F+WGE SGG+LGHG++ D   P+L++ L  +N+  
Sbjct: 261 SVVLDVHQIASGVRHMALVTRQGEVFTWGEESGGRLGHGIDKDFGRPQLVEFLAVTNVES 320

Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
           VACGE HTCAV++S +L++WGDG +N+GLLG  +++SHW+P++++G +EGLQ+ SI CG 
Sbjct: 321 VACGENHTCAVSISDELFSWGDGKYNVGLLGHGTDVSHWVPKRINGPLEGLQVISIACGT 380

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           WH+A  TS GKLFTFGDGTFG LGHG+R S + P+EV+ L  LKT+  +CGVWHTAAIVE
Sbjct: 381 WHSALATSNGKLFTFGDGTFGVLGHGNRESVAYPKEVQLLSGLKTITVACGVWHTAAIVE 440

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
           V  + SGSN +SS+KLFTWGDG + +LGHG+ E  + P CV    + +F ++ACGH++TI
Sbjct: 441 VTFQ-SGSN-VSSRKLFTWGDGDKYRLGHGNKETYLQPTCVSTLIEYNFHQIACGHTMTI 498

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
           ALT +G +F+MG  ++GQLG+  S GK P  ++  +   ++E+I+CG++H+A ++S+SE+
Sbjct: 499 ALTTSGHLFTMGGTEFGQLGNSLSDGKIPILVQDALVGEFVEEISCGAHHVAALTSRSEL 558

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSIC 652
           YTWGKGANG+LGHGD +++++PTLVEAL+++ VK++ CGS+FT+ IC+HK VS  D S C
Sbjct: 559 YTWGKGANGRLGHGDIDDRKSPTLVEALKERHVKNISCGSSFTSCICIHKWVSGVDQSTC 618

Query: 653 SGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSE 712
           +GCR  F F R+RHNCYNCGLV+C  CSS+K MK ALAP   KP+RVCD C+ KL    E
Sbjct: 619 TGCRQPFGFTRKRHNCYNCGLVHCHGCSSRKVMKAALAPTPGKPHRVCDSCYTKLKAV-E 677

Query: 713 SGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSK-PKGKSYHASPSLNGKFQWEP- 770
           + + S + R          +VT  +    RS+ DG+ +  +G++  ++  L   F  EP 
Sbjct: 678 ANAASNLNR----------KVTITQ---PRSSIDGRDRYGQGETVRSTKILFPPFS-EPL 723

Query: 771 -----------NSDFIKSNKISA-------SPPGSR-------RVSRAPSPIS------R 799
                      NS  + +++I +       S P S        +   AP+P S      R
Sbjct: 724 KYLEMRTNKLGNSSMLPTSQIPSIAQMKDMSFPSSTSSIQNGLKYPLAPNPPSTPPLNAR 783

Query: 800 KSSP-ACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELE 858
             SP A   +    +    S  I +  K+TN+  NQ+   L+ Q   L +KS    +E++
Sbjct: 784 SVSPYARRPSPPRSSSPGFSRSIIDSMKKTNELLNQQVSKLQNQNRSLKQKST---MEIQ 840

Query: 859 RTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
           +  + +K+ T +A EE+ K+KA +E   S+ AQ +
Sbjct: 841 KLHKNIKDATSLAAEESSKHKATKEYFGSMIAQLK 875


>gi|357439465|ref|XP_003590009.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355479057|gb|AES60260.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1080

 Score =  741 bits (1912), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/910 (45%), Positives = 561/910 (61%), Gaps = 72/910 (7%)

Query: 11  ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
           ERD EQA   LK+GT L+KY R+GKPK C FRLS DE  LIW +  +EK LKLS V RII
Sbjct: 5   ERDIEQAFITLKRGTQLVKYSRQGKPKLCNFRLSQDETSLIWISHGKEKNLKLSSVLRII 64

Query: 71  PGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDL----ICKDKDEAELWFTALRALISED 124
            GQRTAVF+RY +PEK+Y SFSLIY+   RSLDL    ICKD  E E+W + L+ALIS  
Sbjct: 65  SGQRTAVFRRYLRPEKDYLSFSLIYKKGERSLDLVRENICKDTAEVEVWLSGLKALISTG 124

Query: 125 NRCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKA 184
                R+                        S+LT+ DS D          SP +R    
Sbjct: 125 QLRNRRT-----------------------RSELTD-DSNDI---------SPNDR---P 148

Query: 185 FSEVLSFTAAA-------KAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAV 237
           F   L FTA+        +A  R ES S   +   S     A  R+S  D  R+S+SS  
Sbjct: 149 FGGALEFTASIPKGRFSFEAVPR-ESTSNRRSDAGSEHTSMAPVRTSVGDGSRVSVSSTN 207

Query: 238 SSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLD 297
            +SS  S  +D + LGDVFIWGE    G    + +G+      + D L+PK LES VVLD
Sbjct: 208 YASSVVSGPDDIESLGDVFIWGEVWAEG---NSSDGLGSQVPSKIDMLIPKPLESDVVLD 264

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
              I  G  H  LVT+QG+IF+WGE SGG+LGHG + D   P+L+D+L  +++  VACGE
Sbjct: 265 VNYIEPGVSHIALVTRQGEIFTWGEDSGGRLGHGFDKDYGKPRLVDSLAITSVSFVACGE 324

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           +HTCAV++SGDLYTWGDG HN G+LG  +++SH IP++V+G +EG Q+ SI CG WHTA 
Sbjct: 325 YHTCAVSISGDLYTWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGAWHTAL 384

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           ITS GKLFTFGDGT G LGHGDR S + P+E++ L   K V  +CGVWHTAAI+EV  ++
Sbjct: 385 ITSNGKLFTFGDGTLGVLGHGDRESVAYPKELQLLSGHKAVKVACGVWHTAAIIEVNDQS 444

Query: 478 SGSNGLSS-KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
             S+  SS KKLFTWGDG + +LGH + E  + P CV    D +F +VACGHS+T+ALTA
Sbjct: 445 GSSSNTSSSKKLFTWGDGDQYRLGHANKETYLQPTCVAALADYNFLQVACGHSLTVALTA 504

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           +G VF+MGS  YGQLG+P S GK P  +   ++   +E+I+CG++H+AV++S+SE+YTWG
Sbjct: 505 SGHVFTMGSKAYGQLGNPTSDGKVPILVRDKLQGETVEEISCGTHHVAVLTSRSELYTWG 564

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCR 656
           +GANG+LGHGD E+++TP LVEAL+++ VK++ CG+NFT  IC+HK VS  D S+CSGCR
Sbjct: 565 RGANGRLGHGDIEDQKTPILVEALKERHVKNIACGANFTTCICIHKWVSGNDQSVCSGCR 624

Query: 657 NQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGS- 715
             F F R+RHNCY+CGLVYC  CSSKK++K ALAP  +KP+RVCD C+ KL     S + 
Sbjct: 625 QPFGFTRKRHNCYHCGLVYCHPCSSKKALKAALAPTPSKPHRVCDACYAKLKGCENSNAS 684

Query: 716 --NSQIPRNSSGLF--QNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPN 771
             N +I R SS ++  +  +RV  + +    S+     K  G ++ +S       Q +  
Sbjct: 685 HFNKEITRPSSSVYGREKTERVEVRPSKFLLSSATCLVKSLGSTHESSSMAGDALQLK-- 742

Query: 772 SDFIKSNKISASPPGSRRV----SRAPSPI----SRKSSPACSITMNSFTDLAN--SEVI 821
            D I     SA+   SR +    S+AP+P     SR +SP      +    ++   S  +
Sbjct: 743 -DIIFPGPSSATQKASRALIMQQSQAPTPPPSANSRPASPYSRRPPSPTRSVSPGFSRSL 801

Query: 822 FEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAA 881
            +  K+ N++ NQE   L+  +  L +K    ++++    + ++E   +A EE+ K++ A
Sbjct: 802 IDSLKKKNEHLNQEVSKLQNHIRSLKQKGDMQDIKIRELQKNIEEANLLAGEESSKHREA 861

Query: 882 QEVIRSLTAQ 891
           +E I+S+T +
Sbjct: 862 KEFIKSITEE 871


>gi|296083663|emb|CBI23652.3| unnamed protein product [Vitis vinifera]
          Length = 1062

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/922 (44%), Positives = 557/922 (60%), Gaps = 95/922 (10%)

Query: 11  ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
           ERD EQA+  LKKGT L+KY R+GKPKF PFR+S+DE  LIWY+  EE+ LKLS VSRII
Sbjct: 11  ERDIEQALVTLKKGTQLIKYSRKGKPKFRPFRISTDETTLIWYSHGEERNLKLSSVSRII 70

Query: 71  PGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCK 128
           PGQRTAVF+RY +PEK+Y SFSL+Y N  RSLDL+ +     E+W   L+ALIS     +
Sbjct: 71  PGQRTAVFRRYLRPEKDYLSFSLLYNNGERSLDLVSEMGLFTEVWLAGLQALISTG---Q 127

Query: 129 SRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYE-----NSPQNRLGK 183
            R+    SD P            + ++  L    +      ++ ++     +  QN  G+
Sbjct: 128 HRNRRTRSDIPDVRISFQHQYIYAYVNIYLQKNGTFICYIYIMLFQFHDGGDFIQN--GR 185

Query: 184 AFSEVLSFT---AAAKAYTRAESVSKSLNFVAS-GGLDDANS--RSSTADSFRISLSSAV 237
            F   L F    A  ++     S   SLN+ +S  G +  N   R+S  D FRIS+SS  
Sbjct: 186 PFGVNLDFASSIARGRSSVDLSSRDSSLNWASSDAGSERTNMQLRTSGVDGFRISVSSTP 245

Query: 238 SSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLD 297
           S SSQGS  +D + LGDV++WGE                                     
Sbjct: 246 SCSSQGSGPDDIESLGDVYVWGE------------------------------------- 268

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
              IACG +H  LVT+QG++F+WGE SGG+LGHG++ D S P L++ L  +N+  VACGE
Sbjct: 269 ---IACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGE 325

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           +HTCAV+ SGDL+TWGDG HN GLLG  +E+SHWIP++VSG +EGLQ+ S+ CG WH+A 
Sbjct: 326 YHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTWHSAL 385

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
            TS GKLFTFGDGTFG LGHGDR S   PREV+ L  LKT+  +CGVWHTAAI+EV  + 
Sbjct: 386 ATSNGKLFTFGDGTFGVLGHGDRESVPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQ- 444

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
           SG+N +SS+KLFTWGDG + +LGHG  E  ++P CV    D +F ++ACGH++T+ALT +
Sbjct: 445 SGTN-ISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTTS 503

Query: 538 GQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
           G VF+MG   YGQLG+P S G+ P  ++  +   ++E+I+CG+YH+AV++S+SEV+TWG+
Sbjct: 504 GHVFTMGGTAYGQLGNPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGR 563

Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRN 657
           GANG+LGHGD E++++PT VEAL+D+ VKS+ CGSNFTA+IC+HK VS AD S+CSGCR 
Sbjct: 564 GANGRLGHGDTEDRRSPTFVEALKDRNVKSISCGSNFTASICIHKWVSGADQSVCSGCRQ 623

Query: 658 QFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNS 717
            F F R+RHNCYNCGLV+C  CSSKK++K ALAP   KP+RVCD C+ KL   +E+G  S
Sbjct: 624 AFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDPCYAKLK-AAEAGDAS 682

Query: 718 QIPRNSSGLFQNCKRVTEKENMNSRSATDGQS---------KPKGKSYHASPSLNGKFQW 768
              R ++   ++       +    RSA    S         KP        PS   +   
Sbjct: 683 IFNRKNTVPRRSIDATIRSDRGEVRSARILMSPGPINYFEFKPARLGPRPDPSPMIQSSQ 742

Query: 769 EPN--SDFIKSNKISASPPGSRRV-----------------SRAPSPISRKSSPACSITM 809
            P+   D    + +SA     + V                 SR  SP SR+ SP  S   
Sbjct: 743 GPSLLKDIAFPSSLSALQNALKPVITASPQTAPPPPPQPAFSRPVSPYSRRPSPPRS--- 799

Query: 810 NSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQ 869
                   S  + +  K+TN+  NQE   L+ Q+  L +KS+  + E+++  +  +E   
Sbjct: 800 ---AGPVFSRSVIDSLKKTNELLNQEVTKLQNQVRSLKQKSEGQDAEIQKLRKNAQEADL 856

Query: 870 IAQEEAEKNKAAQEVIRSLTAQ 891
           +A EE+ K   A+EV++S+T Q
Sbjct: 857 LALEESSKCTVAKEVVKSITTQ 878


>gi|413951018|gb|AFW83667.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1054

 Score =  736 bits (1900), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/917 (44%), Positives = 576/917 (62%), Gaps = 102/917 (11%)

Query: 15  EQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPGQR 74
           E A+  LKKG+ L+KY R+GKPK   FRLSSDE  LIWY+ K+EK L+LS VS++IPGQR
Sbjct: 5   ENALITLKKGSKLIKYSRKGKPKIRSFRLSSDETALIWYSHKKEKFLRLSSVSKVIPGQR 64

Query: 75  TAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCKSRSD 132
           TAVF+R+ +PEK+Y SFSLIY+N  RSLDL+CKD+ E E+WF+AL ALIS    C  R+ 
Sbjct: 65  TAVFRRFLRPEKDYLSFSLIYKNGQRSLDLVCKDQVEVEVWFSALEALISS---CH-RNS 120

Query: 133 SISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLSFT 192
           S+     R            S S D++    G        Y+++    L  A S   SF 
Sbjct: 121 SVDEHKDR-----------VSFSDDVSYYRDGH------PYDST----LDIASSISRSFN 159

Query: 193 AAAKAYTRAESVSKSLNFVASGGLDDANS-RSSTADSFRISLSSAVSSSSQGSCHEDFDG 251
            A   Y R  S S      +  G D AN  R+S ADS R+S+SSA SSSSQGS  +D + 
Sbjct: 160 TA--DYCRGSSFSFRR---SDAGSDRANMIRTSGADSTRLSISSAPSSSSQGSGTDDIES 214

Query: 252 LGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           LGDV++WGE   +       +G   SS  + D L+PK LES VVLD   I CGS+H  L 
Sbjct: 215 LGDVYVWGEVWTD---AAPSDGHTSSSCSKVDVLIPKPLESDVVLDVNQIVCGSRHVALT 271

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           T+QG++F+WGE  GG+LGHG + D+S PKL+++L+ + +  ++CGEFHTCA++ SGDL+ 
Sbjct: 272 TRQGEVFTWGEELGGRLGHGTDTDISRPKLVESLSVTIVDFISCGEFHTCAISASGDLFN 331

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WGDG +  GLLG  +  SHW+P++VSG +EGLQ+ S+ CG WH+A ITS G+L+TFGDG 
Sbjct: 332 WGDGSYRAGLLGYDTGASHWLPKRVSGPLEGLQVLSVACGSWHSALITSTGRLYTFGDGK 391

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           FGALGHG+R S + P+EVE L   +TV  +CGVWH+AAIVE + +T G N + SKKL+TW
Sbjct: 392 FGALGHGNRESAAYPKEVEALNGFRTVKVACGVWHSAAIVEASVQT-GMN-VVSKKLYTW 449

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           GDG + +LG GD E R++P C++   + +F ++ CG ++T+AL  +G V++MGS+D GQL
Sbjct: 450 GDGDKNRLGQGDKEARLIPTCLQALLEHNFHQLGCGQNMTVALATSGHVYTMGSSDNGQL 509

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
           G+P S GK P  ++  + +  +E+I+CG+ H+AV++S+SEVYTWG GANG+LGHGD  +K
Sbjct: 510 GNPKSDGKHPCLVKDKLANELVEEISCGAAHVAVLTSRSEVYTWGLGANGRLGHGDLNDK 569

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNC 671
           +TPT+VEAL+D+ VKS+ CGSNFT  IC+H+ VS AD S+C+GCR  F F R+RHNCYNC
Sbjct: 570 KTPTIVEALKDRHVKSISCGSNFTTCICIHRWVSGADQSVCTGCRQAFGFTRKRHNCYNC 629

Query: 672 GLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRNSSGLFQNCK 731
           GLV+C  CSS+K +K ALAP   KP+RVCD CF+KL     S SN+              
Sbjct: 630 GLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFLKLKNADTSSSNAN------------- 676

Query: 732 RVTEKENMNSRSATDGQSKPKGKSYH--ASPSLN-GKFQ--------WEPNSDFIKSNKI 780
               + N  +R +TD + KP+ +     A+PS   GK+          +P    +K+++ 
Sbjct: 677 ----RRNAATRRSTDSREKPEIRPPRLVATPSAEPGKYMEVKASKSDMKPADSIMKASQA 732

Query: 781 SA-------------------SPPGSRRVSRA--------PSPISR--KSSPACSITMNS 811
           SA                     P +  +S A        PSP ++  KS P  +I  +S
Sbjct: 733 SALLQFKDLGFGAQFGGLQPMGMPPALAMSPAIPAFSLAPPSPYTKKMKSPPTSAIPQSS 792

Query: 812 FTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIA 871
             D+       ++ +++ND  NQE   L++Q+EDL +K +    +L+++ +K K    +A
Sbjct: 793 KVDV-------DHLQKSNDLLNQEVLKLQSQVEDLKQKCEAQHEQLQKSDKKAKSVASMA 845

Query: 872 QEEAEKNKAAQEVIRSL 888
            EE+ K  AA E ++ L
Sbjct: 846 TEESSKRNAAVEFVKFL 862


>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
 gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
          Length = 892

 Score =  730 bits (1884), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/732 (54%), Positives = 514/732 (70%), Gaps = 27/732 (3%)

Query: 189 LSFTAAAKAYTRAESVSKSLNFVASGGLDDANS--RSSTADSFRISLSSAVSSSSQGSCH 246
           + +    + +  ++S + S++ ++SG  D+ N   R    D+FR+S SSAVSSSS GS H
Sbjct: 1   MLYAVPPRGFFPSDSNAGSVHSMSSGHSDNTNGHPRGVPMDAFRVSYSSAVSSSSHGSGH 60

Query: 247 EDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSK 306
           +D D LGDVFIWGEG G G+LGG  + V  SS  + D L+PK LE  V LD Q+I+CG +
Sbjct: 61  DDGDALGDVFIWGEGTGEGILGGGGSRVGSSSGAKMDCLVPKPLEFAVRLDVQNISCGGR 120

Query: 307 HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
           HA LVTKQG+I+SWGE SGG+LGHGV+ DVS PKLIDAL+  NI +VACGE+HTCAVTLS
Sbjct: 121 HAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTCAVTLS 180

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
           GDLYTWGDG    GLLG  +++SHW+P+ V+G +EG+ +SSI CGPWHTA +TSAG+LFT
Sbjct: 181 GDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLEGIHVSSISCGPWHTALVTSAGQLFT 240

Query: 427 FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
           FGDG+FG LGHGDR S SVPREVE+LK L+TV A+CGVWHTAA+VEV    S S+  SS 
Sbjct: 241 FGDGSFGVLGHGDRESISVPREVESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSG 300

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           K+FTWGDG +G+LGHGD E ++VP CV    + +FC+VACGH +T+ALT +G V++MGSA
Sbjct: 301 KIFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSA 360

Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            YGQLG+  + G  P R+EG +   ++E+I+CG+YH+AV++S++EVYTWGKGANG+LGHG
Sbjct: 361 VYGQLGNTQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHG 420

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRH 666
           D ++K TPTLVEAL+DKQV+SVVCG NFTAAIC+HK VS  D S+CSGCR  FN RR+RH
Sbjct: 421 DTDDKNTPTLVEALKDKQVRSVVCGINFTAAICIHKWVSGVDQSMCSGCRQPFNLRRKRH 480

Query: 667 NCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQ------IP 720
           NCYNC LV+C  CSSKKS+K +LAP  NKPYRVCD C+ KL    E+  +S       +P
Sbjct: 481 NCYNCALVFCHSCSSKKSLKASLAPNTNKPYRVCDTCYSKLTKGPETDMHSSAKRAATVP 540

Query: 721 RNSSGLFQNCK-----RVTEKENMNSRSATDGQSKPKGKSYH-----ASPSLNGKFQWEP 770
             S  + ++ +     +++   +M S    D +   K K +       SP  NG   W  
Sbjct: 541 GFSDTIEEDLETRSNAQLSRLSSMESFKHLDSRYSKKNKKFEFNSTRVSPVPNGSSHWSG 600

Query: 771 -------NSDFIKSNK-ISASPPGSRRVSRAPSPISRKS-SPACSITMNSFTDLANSEVI 821
                  N  F  S K  SAS PGSR VSRA SPISR++  P  +    +   L +  V+
Sbjct: 601 LNISRSFNPVFGSSKKFFSASVPGSRIVSRATSPISRRASPPRSTTPTPTLGGLTSPRVV 660

Query: 822 FEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAA 881
               K TND  +QE   LR+Q+E LTRKSQ LEVELERT+++LKE   IA EE  K KAA
Sbjct: 661 PNDGKPTNDALSQEVLNLRSQVESLTRKSQLLEVELERTTKQLKEAISIAGEETAKCKAA 720

Query: 882 QEVIRSLTAQAR 893
           +EVI+SLTAQ +
Sbjct: 721 KEVIKSLTAQLK 732


>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1056

 Score =  728 bits (1880), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/891 (44%), Positives = 557/891 (62%), Gaps = 47/891 (5%)

Query: 13  DTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPG 72
           D ++A+  LKKGT LLKYGR+GKPKF PFRLS+DE  L+W +  ++K LKL+ VSRI+ G
Sbjct: 6   DIDKALVALKKGTQLLKYGRKGKPKFIPFRLSNDESTLVWVSNNKDKSLKLASVSRILSG 65

Query: 73  QRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCKSR 130
           QRT VFQR+  PEK++ SFSLIY +  RSLDLICK+K EAE WFT L ALI     C+ +
Sbjct: 66  QRTLVFQRFLLPEKDHLSFSLIYNDGKRSLDLICKNKVEAEAWFTGLSALI-----CRGQ 120

Query: 131 SDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLS 190
             S          Q      ++ +  D   + S        +  +S +N+L    S   S
Sbjct: 121 HGS--------QVQHIDGIRIAGLPFDGARESSLSGSSTFTS--DSFENKLSSVNS---S 167

Query: 191 FTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFD 250
              ++  YT +E    S          D   +S ++   RIS+SSA+S+SS GS  ED +
Sbjct: 168 KDRSSGEYTYSERTDVS----------DMQVKSVSSSDIRISVSSALSTSSHGSGGEDSE 217

Query: 251 GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
             GD+++WGE + + +     +    S     D L+PK LES V+LD   +ACG KHA L
Sbjct: 218 SFGDIYVWGEVICDTISRSGSDRSAYSPGTTTDVLVPKPLESNVMLDVSYVACGVKHAAL 277

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           VT+Q ++F+WGE   G+LGHG+  +V  P+L+++L+  N+ ++ACGEFHTCAVT +GDLY
Sbjct: 278 VTRQAEVFTWGEECSGRLGHGIGTNVFQPRLVESLSTCNVELIACGEFHTCAVTATGDLY 337

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           TWGDG HN GLLG  S +SHWIP++VSG ++GL +S++ CG WHTA ITS+G+L+TFGDG
Sbjct: 338 TWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSAVSCGTWHTALITSSGQLYTFGDG 397

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
           TFG LGHG+R+S S P+EVE+LK L+T+  SCGVWHTAA+VEV    S SN  SS KLFT
Sbjct: 398 TFGVLGHGNRASCSYPKEVESLKGLRTISVSCGVWHTAAVVEVI--ISQSNA-SSGKLFT 454

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WGDG + +LGHGD   ++ P CV    D +F K ACGH++TI LT +G +F++GS  YGQ
Sbjct: 455 WGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGSPVYGQ 514

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG+P + G++P  +E  +    + ++ACGSYH+AV+++  EVYTWGKG NG+LGHGD  +
Sbjct: 515 LGNPNNDGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEVYTWGKGTNGRLGHGDIAD 574

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYN 670
           ++ PTLVEAL+D+ VK V CGS+FTAAIC HK VS  + S CS CR  F F R+RHNCYN
Sbjct: 575 RKVPTLVEALKDRSVKRVACGSSFTAAICQHKWVSGMEQSQCSACRQPFGFTRKRHNCYN 634

Query: 671 CGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESG---SNSQIPR-----N 722
           CGLV+C  CSSKK+++ AL+P   KPYRVCD C++KL+   +SG   S + IPR      
Sbjct: 635 CGLVHCHSCSSKKALRAALSPNPGKPYRVCDSCYVKLSKVLDSGVSYSRNTIPRLPGDTK 694

Query: 723 SSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNKISA 782
           +  +     RV +  + +     D ++  + K    S  +    Q + +  FI +  +  
Sbjct: 695 AERIDTKATRVAQSNSSDMIRNLDVKAAKQTKKSEYSSQVPATLQLK-DIPFISAPDLQN 753

Query: 783 SPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQ 842
               + +    P    R + P+  +   +++   +SE      K  N+   QE   L+A+
Sbjct: 754 LSTVANQYPYDP----RSTLPSLRMPYLNYSSSMSSESSESL-KDANELLKQEVQKLQAE 808

Query: 843 LEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
           +  L ++ +  + EL++   K +E   +A EEA K K A++VI SLTAQ +
Sbjct: 809 VNSLRQEREQQDAELQKADAKAREAMNLATEEASKLKTAKDVINSLTAQLK 859


>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
 gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
          Length = 1057

 Score =  726 bits (1875), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/893 (44%), Positives = 551/893 (61%), Gaps = 62/893 (6%)

Query: 13  DTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPG 72
           D ++A+  LKKGT LLKYGR+GKPKF PFRLS+DE  LIW +  +EK LKLS VSR++ G
Sbjct: 6   DIDKALIALKKGTQLLKYGRKGKPKFTPFRLSNDESTLIWVSNNKEKSLKLSSVSRVLSG 65

Query: 73  QRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCKSR 130
           QRT VFQR+  PEK++ SFSLIY +  RSLDLICKDK EAE+WF  L  LIS        
Sbjct: 66  QRTLVFQRFLLPEKDHLSFSLIYNDGKRSLDLICKDKVEAEVWFAGLNVLIS-------- 117

Query: 131 SDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSG--DTQPILVAYENSPQNRLGKAFSEV 188
                   P  H  ++   H+  I +   + + G   +     AY          +F   
Sbjct: 118 --------PGQHGSQHQ--HIDGIRNGALSFECGRDSSLSSSSAYTTD-------SFENK 160

Query: 189 LSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHED 248
           LS   +AK  +  E       +     + D   + +++D  RIS+SSA+S+SS GS  +D
Sbjct: 161 LSSANSAKDRSSGE-----FTYSERTDVSDMQVKGASSD-IRISVSSALSTSSHGSG-DD 213

Query: 249 FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            +  GDV++WGE + +       +    S+    D L+PK LES V+LD   +ACG KHA
Sbjct: 214 SESFGDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHA 273

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
            LVT+Q ++F+WGE   G+LGHG    +  P+L+++L+  N+  +ACGEFHTCA+T +GD
Sbjct: 274 ALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITATGD 333

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           LYTWGDG HN GLLG  S +SHWIP++VSG +EGLQ+S++ CG WHTA ITS+GKL+TFG
Sbjct: 334 LYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGTWHTALITSSGKLYTFG 393

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           DGTFG LGHG+R + S P+EVE+LK L+T+  SCGVWHTAA+VEV    S +   SS KL
Sbjct: 394 DGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNT---SSGKL 450

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           FTWGDG + +LGHGD   ++ P CV    D +F K  CGH++TI LT +G +F+ GS+ Y
Sbjct: 451 FTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVY 510

Query: 549 GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           GQLG+P + G++P  +E  +    + ++ACG+YH+AV++   EVYTWGKGANG+LGHGD 
Sbjct: 511 GQLGNPNNDGRYPRLVEEKLGGGGVVEVACGAYHVAVLTQSGEVYTWGKGANGRLGHGDI 570

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNC 668
            +++TPT VEALRD+ VK + CGS FTAAIC HK VS  + S CS CR  F F R+RHNC
Sbjct: 571 ADRKTPTFVEALRDRSVKRIACGSGFTAAICQHKSVSGMEQSQCSSCRQPFGFTRKRHNC 630

Query: 669 YNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESG------SNSQIPRN 722
           YNCGLV+C  CSSKK+++ AL+P   KPYRVCD C++KL+   +SG      +  +IP +
Sbjct: 631 YNCGLVHCHSCSSKKALRAALSPNPGKPYRVCDSCYLKLSKVLDSGIGHNKNNTPRIPGD 690

Query: 723 SSGLFQNCK--RVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNKI 780
           S     + K  RV    + +     D ++  + K Y   P      Q + +  FI +   
Sbjct: 691 SKADKMDSKGNRVASANSSDMIKNLDVKAAKQTKKYDYPPQFPAILQLK-DIPFIGA--- 746

Query: 781 SASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLR 840
                      + P+  S  SSP   +   + +  + S   F+  +  N+   QE   L+
Sbjct: 747 ---------ADQQPND-STYSSPLLRLPNLN-SSSSLSSESFDILRDANELLKQEVQKLK 795

Query: 841 AQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
            ++  L ++ +  + +L+++  K  E   +A EEA K+KAA++VI+SLTAQ +
Sbjct: 796 EEVNSLRQQREQQDADLQKSEAKAHEAMTLASEEASKSKAAKDVIKSLTAQLK 848


>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
 gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
          Length = 1020

 Score =  726 bits (1875), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/900 (44%), Positives = 558/900 (62%), Gaps = 70/900 (7%)

Query: 15  EQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPGQR 74
           + A+  LKKG+ L+KY R+G+PK   FRLSSDE  LIW++  + K L LS VSRIIPGQR
Sbjct: 5   DNALITLKKGSNLIKYSRKGRPKIREFRLSSDETSLIWHSHSKVKHLVLSSVSRIIPGQR 64

Query: 75  TAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCKSRSD 132
           TAVF+R+ +PEK+Y SFSLIY+N  RSLDL+CKD+ E E+WF+ L  LI+          
Sbjct: 65  TAVFRRFLRPEKDYLSFSLIYKNGQRSLDLVCKDQAEVEVWFSTLETLIT---------- 114

Query: 133 SISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLSFT 192
                S R     + PS   SIS ++++            Y+++  +      +  ++ T
Sbjct: 115 -----SCRKSYSVDGPSDRLSISDEVSH------------YQDNAFHDTTLDIASSITRT 157

Query: 193 AAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGL 252
             +  Y+   S++ +   V S   D AN   ++ DS R+S+SSA SSSSQGS  +D + L
Sbjct: 158 FNSAGYSTNNSLNSAKTDVVS---DRANMLRASTDSSRLSISSAPSSSSQGSGQDDIESL 214

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           GDV++WGE   + +          S AD    L+PK LES VVLD Q IACG +H  L T
Sbjct: 215 GDVYVWGEVWTDVIPAEGSTNYLCSKAD---ILIPKPLESDVVLDVQQIACGYRHIALTT 271

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           +QG++F+WGE  GG+LGHG +AD+S PKL++AL  SN+  +ACGEFHTCAVT SGDLYTW
Sbjct: 272 RQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYIACGEFHTCAVTASGDLYTW 331

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           GDG +N+GLLG  +  SHW+P++VSG +EG+Q+ S+ CG WH+A  TS+GK+FTFGDGTF
Sbjct: 332 GDGYYNVGLLGNGAGASHWLPKRVSGPLEGVQVLSVSCGSWHSALTTSSGKVFTFGDGTF 391

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           GALGHG R +   P+EVE L   +T+  +CG+WH+AAIVE +   S +  + S+KL+TWG
Sbjct: 392 GALGHGKRETVGYPKEVEALSGFRTMKVACGLWHSAAIVESSNHVSIN--VISRKLYTWG 449

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            G + QLGHGD + R+VP CV+   D SF +VACGHS+TIAL+ +G VF+MGS+  GQLG
Sbjct: 450 AGDKNQLGHGDKDSRLVPTCVQSLIDYSFHQVACGHSMTIALSTSGHVFTMGSSSNGQLG 509

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
           +P S GK P  ++  +    +E+I+CGS H+AV++S+SEVYTWG GANG+LGHG  E+K+
Sbjct: 510 NPKSDGKQPIPVQDRLSGELVEEISCGSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKK 569

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNCG 672
            PTLVEAL+D+ VKS+ CGSNFT  IC+HK VS AD S+CSGCR  F F R+RHNCYNCG
Sbjct: 570 KPTLVEALKDRHVKSIACGSNFTTCICIHKWVSGADQSVCSGCRQPFGFTRKRHNCYNCG 629

Query: 673 LVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRNSSGL--FQNC 730
           LV+C  CSS+K +K ALAP   KP+RVCD CF+KL     S ++S   RN+       + 
Sbjct: 630 LVHCHACSSRKVLKAALAPTPGKPHRVCDSCFMKLKAADTSNNSSHGKRNAIARRSVDSK 689

Query: 731 KRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNKISASP------ 784
            R    E   SR AT   ++P  K     P  N + + +P S        S  P      
Sbjct: 690 DRSERPEIRPSRLATGSTAEPL-KQAEIKPVRN-EIKPDPMSTMRAPQVPSVLPFNNLAF 747

Query: 785 ------PGSRR----------VSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQT 828
                 P S +          +  + SP+++K  P  +  +   ++  N ++    +KQ 
Sbjct: 748 GATFGGPASLKPMVMAPMPMAMPMSQSPLTKKPCPPTTTPLCGKSETDNLKI----AKQV 803

Query: 829 NDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSL 888
               N++   L++Q+  L +K    E +L++  R+ + +  IA EE+ +     E IR L
Sbjct: 804 ---LNEDIAKLQSQVNKLKQKCDAQEEQLQKAERRAENSNSIAAEESSRRNGVLEFIRFL 860


>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1009

 Score =  726 bits (1874), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/902 (44%), Positives = 564/902 (62%), Gaps = 86/902 (9%)

Query: 15  EQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPGQR 74
           + A+  LKKG+ L+KY R+G+PK   FRLSSDE  L+WY+  + K L LS VSRIIPGQR
Sbjct: 5   DNALIALKKGSKLIKYSRKGRPKIREFRLSSDETSLVWYSHSKVKYLVLSSVSRIIPGQR 64

Query: 75  TAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCKSRSD 132
           TAVF+R+ +PEK+Y SFSLIY+N  RSLDL+CKD+ E E+WF+ L ALI+          
Sbjct: 65  TAVFRRFLRPEKDYLSFSLIYKNGQRSLDLVCKDQAEVEVWFSTLEALIT---------- 114

Query: 133 SISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLSFT 192
                S R     + PS   S+S ++++            Y+++  +             
Sbjct: 115 -----SCRKSYSADGPSDRLSVSDEVSH------------YQDTFHD------------- 144

Query: 193 AAAKAYTRAESVSKSLNFVASGGLDD-ANSRSSTADSFRISLSSAVSSSSQGSCHEDFDG 251
                   A S++++ N   +  + D AN   ++ DS R+S+SSA SSSSQGS  +D + 
Sbjct: 145 ---TTLDIASSITRTFNSAKTDVVSDRANMLRASTDSSRLSISSAPSSSSQGSGQDDIES 201

Query: 252 LGDVFIWGEGLGNGLLG-GAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
           LGDV++WGE   + +   G+ N +      + D L+PK LES VVLD Q IACG +H  L
Sbjct: 202 LGDVYVWGEVWTDMIPAEGSANYL----CSKADILIPKPLESDVVLDVQQIACGYRHIAL 257

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
            T+QG++F+WGE  GG+LGHG +AD+S PKL++AL  SN+  VACGEFHTCA+T SGDLY
Sbjct: 258 TTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALAVSNVEYVACGEFHTCAITASGDLY 317

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           TWGDG +N GLLG  +  SHW+P++VSG +EG+Q+ S+ CG WH+A  TS+GK+FTFGDG
Sbjct: 318 TWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCGSWHSALTTSSGKVFTFGDG 377

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
           TFGALGHG+R + + P+EVETL   +T+  +CG+WH+AAIVE   + +G N +S +KLFT
Sbjct: 378 TFGALGHGNRHTVAYPKEVETLSGFRTIKVACGLWHSAAIVETTNQ-AGVNVIS-RKLFT 435

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG G +  LGHGD + R+VP CV+   D +F +VACGHS+TIAL+ +G VF+MGS+  GQ
Sbjct: 436 WGAGDKNPLGHGDKDARLVPTCVQSLIDYNFHQVACGHSMTIALSTSGHVFTMGSSSNGQ 495

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG+P S GK PT ++  +    +E+I+CGS H+AV++S+SEVYTWG GANG+LGHG  E+
Sbjct: 496 LGNPKSDGKHPTPVQDRLAGELVEEISCGSCHVAVLTSRSEVYTWGMGANGRLGHGGVED 555

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYN 670
           K+ PTLVEAL+D+ VKS+ CGSNFT  IC+HK VS AD S+CSGCR  F F R+RHNCYN
Sbjct: 556 KKKPTLVEALKDRHVKSIACGSNFTTCICIHKWVSGADQSVCSGCRQPFGFTRKRHNCYN 615

Query: 671 CGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRNSSGL--FQ 728
           CGLV+C  CSSKK +K ALAP   KP+RVCD CF+KL     S ++S   RN+       
Sbjct: 616 CGLVHCHACSSKKVLKAALAPTPGKPHRVCDSCFMKLKAAETSSNSSHSKRNAIARRSVD 675

Query: 729 NCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNKISASP---- 784
           +  R    E  +SR AT   ++P  ++     ++  + + +P S        S  P    
Sbjct: 676 SKDRSERPEIRSSRLATGSTAEPLKQA--ELKAVRNEIKPDPMSTMRAPQVPSMLPFNNL 733

Query: 785 --------PGSRR----------VSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSK 826
                   P S +          +  +P+P+++K +PA +  +   +D  N     + +K
Sbjct: 734 AFGATFGGPASLKPMTMAPMPMAMPMSPAPLTKKPTPAAATPLCGKSDTDN----LKMAK 789

Query: 827 QTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIR 886
           Q     N++   L++Q+  L +K    E +L++  R+ + +   A EE+ +     E IR
Sbjct: 790 QV---LNEDISKLQSQVNKLKQKCDAQEEQLQKAERRAEHSASTAAEESSRRNGVLEFIR 846

Query: 887 SL 888
            L
Sbjct: 847 FL 848


>gi|242054133|ref|XP_002456212.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
 gi|241928187|gb|EES01332.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
          Length = 1056

 Score =  725 bits (1872), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/910 (42%), Positives = 570/910 (62%), Gaps = 87/910 (9%)

Query: 15  EQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPGQR 74
           E A+  LKKG+ L+KY R+GKPK   FRLS DE  LIWY+ K+EK L+LS VS++IPGQR
Sbjct: 5   ENALITLKKGSKLIKYSRKGKPKIRSFRLSGDETTLIWYSHKKEKFLRLSSVSKVIPGQR 64

Query: 75  TAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCKSRSD 132
           TAVF+R+ +PEK+Y SFSLIY+N  RSLDL+CKD+ E E+WF+AL  LI   N C  R+ 
Sbjct: 65  TAVFRRFLRPEKDYLSFSLIYKNGQRSLDLVCKDQVEVEVWFSALEGLI---NSCH-RNS 120

Query: 133 SISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLSFT 192
           S+     R     ++  +  S S D T         + +A      + + ++F+      
Sbjct: 121 SVDEHKDRVSFSDDASYYQDSHSYDST---------VDIA------SSISRSFNTAGYCG 165

Query: 193 AAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCH-EDFDG 251
            ++ ++ R+++ S   N +          R+S ADS R+S+SSA  SSS      +D + 
Sbjct: 166 GSSFSFRRSDAGSDRANMI----------RTSGADSTRLSISSAAPSSSSQGSGTDDIES 215

Query: 252 LGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           LGDV++WGE   +       +G   SS  + D L+PK LES VVLD   I CGS+H  L 
Sbjct: 216 LGDVYVWGEVWTD---AAPSDGHTTSSCSKVDVLIPKPLESDVVLDVNQIVCGSRHIALT 272

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           T+QG++F+WGE  GG+LGHG + D+S PKL+++++ + +  ++CGEFHTCA++ SGDL+ 
Sbjct: 273 TRQGEVFTWGEELGGRLGHGTDTDISRPKLVESISVTIVDFISCGEFHTCAISASGDLFN 332

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WGDG ++ GLLG  +  SHW+P++VSG +EGLQ+  + CG WH+A ITS G+L+TFGDGT
Sbjct: 333 WGDGSYHAGLLGYDTGASHWLPKRVSGPLEGLQVLFVACGSWHSALITSTGRLYTFGDGT 392

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           FGALGHG+R S++ P+EVE L   +T+  +CGVWH+AAIVE   +T G N + SKKL+TW
Sbjct: 393 FGALGHGNRESSAYPKEVEALNGFRTIKVACGVWHSAAIVEATVQT-GMN-MVSKKLYTW 450

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           GDG + +LG GD E R++P CV+   + +F ++ACG ++T+AL  +G V++MGS+D GQL
Sbjct: 451 GDGDKNRLGQGDKEARLIPTCVQALLEHNFHQLACGQNMTVALATSGHVYTMGSSDNGQL 510

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
           G+P S GK P  ++  + H  +E+I+CG+ H+AV++S+SEVYTWG GANG+LGHGD  +K
Sbjct: 511 GNPKSDGKQPCLVKDKLAHELVEEISCGAAHVAVLTSRSEVYTWGMGANGRLGHGDLNDK 570

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNC 671
           + PT+VEAL+D+ VKS+ CGSNFT  IC+HK VS AD S+C+GCR  F F R+RHNCYNC
Sbjct: 571 KAPTIVEALKDRHVKSISCGSNFTTCICIHKWVSGADQSVCTGCRQAFGFTRKRHNCYNC 630

Query: 672 GLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRNSSGLFQNCK 731
           GLV+C  CSS+K +K ALAP   KP+RVCD CF+KL     + SN+              
Sbjct: 631 GLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFLKLKNADTTTSNAN------------- 677

Query: 732 RVTEKENMNSRSATDGQSKPKGKSYH--ASPSLN---------GKFQWEPNSDFIKSNKI 780
               + N  +R + D + KP+ +     A+PS            K   +     +K+++ 
Sbjct: 678 ----RRNAATRRSIDSREKPEIRPPRLVATPSAEPVKYMEVKVAKNDMKSADSIMKASQA 733

Query: 781 SA----------------SPPG-SRRVSRAPSPISRKSSPACSITMNSFTDLANS----- 818
           SA                 P G S  V+ +P+  S   +P  + T  + +  A++     
Sbjct: 734 SALLQFKDLGFAAQFGGLQPMGMSPSVAISPAIPSFSVAPPSAYTKKAKSPPASAIPQSC 793

Query: 819 EVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKN 878
           +V  ++ +++ND  NQE   L++Q+EDL +K +    +L+++ +K K    +A EE+ K 
Sbjct: 794 KVDVDHLQKSNDLLNQELLRLQSQVEDLKQKCEAQHEQLQKSDKKAKSVASMATEESSKR 853

Query: 879 KAAQEVIRSL 888
            AA E ++ L
Sbjct: 854 NAAVEFVKFL 863


>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
          Length = 954

 Score =  722 bits (1864), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/711 (51%), Positives = 496/711 (69%), Gaps = 39/711 (5%)

Query: 16  QAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPGQRT 75
           +A+  LKKGT L+KY RRGKPK   FRLSSDE  LIW++ K+EK L+LS V++IIPGQRT
Sbjct: 6   KALITLKKGTKLIKYSRRGKPKIRAFRLSSDETSLIWFSHKKEKFLRLSSVTKIIPGQRT 65

Query: 76  AVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCKSRSDS 133
           AVF R+  PEK+Y SFSLI++N  RSLDL+CKD+ E E+WF+AL  LIS           
Sbjct: 66  AVFGRFLHPEKDYLSFSLIFKNGQRSLDLVCKDQAEVEVWFSALEGLIS----------- 114

Query: 134 ISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLSFTA 193
               S R  +  N      S S ++T               +S  + L  A +   SF +
Sbjct: 115 ----SFRKKSLINEHKDRVSFSEEVTYYQD----------RHSYDSTLDIASNISRSFNS 160

Query: 194 AAKAYTRAESVSKSLNFVASGGLDDANS-RSSTADSFRISLSSAVSSSSQGSCHEDFDGL 252
           A    T + S  KS       G D  N  R+S ADS R+S+SSA+SS SQGS  +D + L
Sbjct: 161 AGYCGTNSFSFRKS-----DVGFDRLNMIRTSAADSSRVSISSALSSYSQGSGTDDIESL 215

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           GDV++WGE   +       +G   SS  + D L+PK LES VVLD   IACG++H  L T
Sbjct: 216 GDVYVWGEVWTDVT---PSDGHTSSSCSKVDVLIPKPLESDVVLDVNQIACGTRHVALTT 272

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           +QG++F+WGE  GG+LGHG +AD+S PKL+++L+ + + +++CGEFHTCAVT SGDL+ W
Sbjct: 273 RQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTTSGDLFNW 332

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           GDG +N+GLLG  +E+S+W+P+KVSG +EGLQ+ S+ CG WH+A  TS+GKL+TFGDGTF
Sbjct: 333 GDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLYTFGDGTF 392

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           G LGHGDR + + P+EVE L   KT+  +CG+WH+AAIVEV  +T G+N + SKKL+TWG
Sbjct: 393 GVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAIVEVTNQT-GAN-VMSKKLYTWG 450

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
           DG + +LGHGD EPR+VP CV+   + +F ++ACGH++T+AL  +G+VF+MGS+  GQLG
Sbjct: 451 DGDKNRLGHGDKEPRLVPKCVQALLEYNFHQLACGHNMTVALATSGRVFTMGSSSNGQLG 510

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
           +P S GK P  ++  +    +E+I+CG+ H+ V++S+SEVYTWG GANG+LGHGD ++++
Sbjct: 511 NPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRK 570

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNCG 672
            P LVEAL+D+ VKS+ CGSNFT  IC+HK VS AD S+C+GCR  F F R+RH+CYNCG
Sbjct: 571 KPCLVEALKDRHVKSISCGSNFTTCICIHKWVSGADQSVCTGCRQAFGFTRKRHDCYNCG 630

Query: 673 LVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRNS 723
           LV+C  CSS+K +K ALAP   KP+RVCD CF+KL   +E+GSN+   RN+
Sbjct: 631 LVHCHACSSRKVLKAALAPTPGKPHRVCDSCFLKLK-AAETGSNNSNRRNA 680


>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
          Length = 1038

 Score =  721 bits (1861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/916 (43%), Positives = 561/916 (61%), Gaps = 89/916 (9%)

Query: 17  AVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPGQRTA 76
           A+  LKKG+ L+KY R+GKPK   FRLSSDE  L+WY+  +EK L+LS VS++IPGQRTA
Sbjct: 12  ALITLKKGSKLIKYSRKGKPKIREFRLSSDENTLVWYSHNKEKCLRLSSVSKVIPGQRTA 71

Query: 77  VFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCKSRSDSI 134
           VF+R+ +PEK+Y SFSLIY+N  RSLDL+CKD+ E E+WF+ L +LI+            
Sbjct: 72  VFRRFLRPEKDYLSFSLIYKNGQRSLDLVCKDQAEVEVWFSTLESLIT------------ 119

Query: 135 SSDSPRSHTQKNSPSHVSSISSDLT-NKDSGDTQPILVAYENSPQNRLGKAFSEVLSFTA 193
              S R +   +  +   S S D+T  +DS        +Y+ +    L  A S   SF +
Sbjct: 120 ---SCRLNFLNDGQTDRVSFSEDVTIYQDS-------TSYDTT----LDIASSITRSFNS 165

Query: 194 AAKAYTRAESVSKSLNFV-ASGGLDDANS-RSSTADSFRISLSSAVSSSSQGSCHEDFDG 251
           A        S   SLN + A  G D  N  R+ST D+ R+S+SSA SSSSQ S  +D + 
Sbjct: 166 AGY------STPNSLNSIRADVGSDRVNMLRASTGDNSRVSISSAPSSSSQSSGLDDIES 219

Query: 252 LGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           LGDV++WGE     L      G       + D L+PK LES VVLD Q IACGS+H  L 
Sbjct: 220 LGDVYVWGEVWTEVL---PSEGSSNYLCSKTDFLIPKPLESDVVLDVQQIACGSRHIGLT 276

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           T+QG++F+WGE  GG+LGHG + D+  PKL+++L  SN+  +ACGEFHTC VT SGDLY 
Sbjct: 277 TRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFHTCVVTASGDLYD 336

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WGDG +N GLLG  + +SHW+P++VSG +EGLQ+ S+ CG WH+A   S+GKLFTFGDGT
Sbjct: 337 WGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHSALTMSSGKLFTFGDGT 396

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           FG+LGHGDR S + P+EVE L   + +  +CGVWH+AAIVE++G+ S +N +S +KLFTW
Sbjct: 397 FGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQAS-TNAMS-RKLFTW 454

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           GDG + +LGHGD E ++VP CV+   D +F +VACGHS+T+AL  +G VF+MGS++ GQL
Sbjct: 455 GDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATSGHVFTMGSSNNGQL 514

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
           G+P + GK P  ++  + +  +E+I+CGS H+A ++S+SEVYTWG GANG+LGHG  E+K
Sbjct: 515 GNPKADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDK 574

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNC 671
           + PTLV+AL+D+ VKS+ CGSNFT  IC+HK VS AD S+CSGCR  F F R+RHNCYNC
Sbjct: 575 KKPTLVDALKDRHVKSISCGSNFTTCICIHKWVSGADQSVCSGCRQPFGFTRKRHNCYNC 634

Query: 672 GLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRNSSGLFQNCK 731
           GLV+C  CSS+K +K ALAP   KP+RVCD CF+KL        +S   RN         
Sbjct: 635 GLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFMKLKAADTGVISSYNKRN--------- 685

Query: 732 RVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNKISASPPGSRRVS 791
            V  + +++ +   +       +    SP+   K+Q   N   +++    A P    + S
Sbjct: 686 -VITRRSIDIKDKLERPEIRPSRLATTSPAEPVKYQETKN---VRNETKPADPMSMMKAS 741

Query: 792 RAPSPISRK---------SSPACSITMNSFTDLANSEVIFEYS----------------- 825
           + P+ +  K         + P    +M     +     +F  S                 
Sbjct: 742 QVPAMLQFKDMAFAGTFGTVPTTVKSMTMGGQMQMGMPMFSPSPPSKKPSPPPATASPLI 801

Query: 826 --------KQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEK 877
                   K+TN+  NQ+   L++Q+  L +K +  + +L++  RK K+   +A EE+ +
Sbjct: 802 GKVDNDGLKKTNELLNQDISKLQSQVNKLKQKCETQDEQLQKAERKAKQAASMASEESAR 861

Query: 878 NKAAQEVIRSLTAQAR 893
                + ++ L ++ +
Sbjct: 862 RNTVLDFVKHLDSELK 877


>gi|48475110|gb|AAT44179.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
 gi|52353417|gb|AAU43985.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
          Length = 1064

 Score =  721 bits (1860), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/914 (43%), Positives = 560/914 (61%), Gaps = 89/914 (9%)

Query: 17  AVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPGQRTA 76
           A+  LKKG+ L+KY R+GKPK   FRLSSDE  L+WY+  +EK L+LS VS++IPGQRTA
Sbjct: 26  ALITLKKGSKLIKYSRKGKPKIREFRLSSDENTLVWYSHNKEKCLRLSSVSKVIPGQRTA 85

Query: 77  VFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCKSRSDSI 134
           VF+R+ +PEK+Y SFSLIY+N  RSLDL+CKD+ E E+WF+ L +LI+            
Sbjct: 86  VFRRFLRPEKDYLSFSLIYKNGQRSLDLVCKDQAEVEVWFSTLESLIT------------ 133

Query: 135 SSDSPRSHTQKNSPSHVSSISSDLT-NKDSGDTQPILVAYENSPQNRLGKAFSEVLSFTA 193
              S R +   +  +   S S D+T  +DS        +Y+ +    L  A S   SF +
Sbjct: 134 ---SCRLNFLNDGQTDRVSFSEDVTIYQDS-------TSYDTT----LDIASSITRSFNS 179

Query: 194 AAKAYTRAESVSKSLNFV-ASGGLDDANS-RSSTADSFRISLSSAVSSSSQGSCHEDFDG 251
           A        S   SLN + A  G D  N  R+ST D+ R+S+SSA SSSSQ S  +D + 
Sbjct: 180 AGY------STPNSLNSIRADVGSDRVNMLRASTGDNSRVSISSAPSSSSQSSGLDDIES 233

Query: 252 LGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           LGDV++WGE     L      G       + D L+PK LES VVLD Q IACGS+H  L 
Sbjct: 234 LGDVYVWGEVWTEVL---PSEGSSNYLCSKTDFLIPKPLESDVVLDVQQIACGSRHIGLT 290

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           T+QG++F+WGE  GG+LGHG + D+  PKL+++L  SN+  +ACGEFHTC VT SGDLY 
Sbjct: 291 TRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFHTCVVTASGDLYD 350

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WGDG +N GLLG  + +SHW+P++VSG +EGLQ+ S+ CG WH+A   S+GKLFTFGDGT
Sbjct: 351 WGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHSALTMSSGKLFTFGDGT 410

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           FG+LGHGDR S + P+EVE L   + +  +CGVWH+AAIVE++G+ S +N +S +KLFTW
Sbjct: 411 FGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQAS-TNAMS-RKLFTW 468

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           GDG + +LGHGD E ++VP CV+   D +F +VACGHS+T+AL  +G VF+MGS++ GQL
Sbjct: 469 GDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATSGHVFTMGSSNNGQL 528

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
           G+P + GK P  ++  + +  +E+I+CGS H+A ++S+SEVYTWG GANG+LGHG  E+K
Sbjct: 529 GNPKADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDK 588

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNC 671
           + PTLV+AL+D+ VKS+ CGSNFT  IC+HK VS AD S+CSGCR  F F R+RHNCYNC
Sbjct: 589 KKPTLVDALKDRHVKSISCGSNFTTCICIHKWVSGADQSVCSGCRQPFGFTRKRHNCYNC 648

Query: 672 GLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRNSSGLFQNCK 731
           GLV+C  CSS+K +K ALAP   KP+RVCD CF+KL        +S   RN         
Sbjct: 649 GLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFMKLKAADTGVISSYNKRN--------- 699

Query: 732 RVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNKISASPPGSRRVS 791
            V  + +++ +   +       +    SP+   K+Q   N   +++    A P    + S
Sbjct: 700 -VITRRSIDIKDKLERPEIRPSRLATTSPAEPVKYQETKN---VRNETKPADPMSMMKAS 755

Query: 792 RAPSPISRK---------SSPACSITMNSFTDLANSEVIFEYS----------------- 825
           + P+ +  K         + P    +M     +     +F  S                 
Sbjct: 756 QVPAMLQFKDMAFAGTFGTVPTTVKSMTMGGQMQMGMPMFSPSPPSKKPSPPPATASPLI 815

Query: 826 --------KQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEK 877
                   K+TN+  NQ+   L++Q+  L +K +  + +L++  RK K+   +A EE+ +
Sbjct: 816 GKVDNDGLKKTNELLNQDISKLQSQVNKLKQKCETQDEQLQKAERKAKQAASMASEESAR 875

Query: 878 NKAAQEVIRSLTAQ 891
                + ++ L ++
Sbjct: 876 RNTVLDFVKHLDSE 889


>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
           distachyon]
          Length = 1068

 Score =  718 bits (1853), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/891 (44%), Positives = 558/891 (62%), Gaps = 47/891 (5%)

Query: 13  DTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPG 72
           D ++A+  LKKGT LLKYGR+GKPKF PFRLS+DE  LIW +   EK LKL+ VSR++ G
Sbjct: 6   DIDKALIALKKGTQLLKYGRKGKPKFTPFRLSNDESTLIWISDNTEKSLKLASVSRVLSG 65

Query: 73  QRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCKSR 130
           QRT VFQR+  PEK++ SFSLIY +  RSLDLICKDK E ++WFT L ALIS        
Sbjct: 66  QRTLVFQRFLLPEKDHLSFSLIYNDGKRSLDLICKDKVETQVWFTCLNALIS-------- 117

Query: 131 SDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLS 190
                   P  H  +  P +   + +   + D G    +  +   +  +   K  S   +
Sbjct: 118 --------PGQHGSQ--PQYTDGMRTGALSFDCGRESSLSSSSTYTTDSLENKLSSANST 167

Query: 191 FTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFD 250
              ++  YT +E    S          +   +S+++   R+S+SSA+S+SS GS  ED +
Sbjct: 168 KDRSSGEYTYSERTDAS----------EMQVKSASSSDIRVSVSSALSTSSHGSG-EDSE 216

Query: 251 GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
             GDV++WGE + +       +G         D L+PK LES V+LD   +ACG KHA L
Sbjct: 217 SFGDVYVWGEVMCDTTSRSGSDGNVHGPGATTDILVPKPLESNVMLDVSYVACGVKHAAL 276

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           +T+Q ++F+WGE   G+LGHG    +  P+L+++L+  N+ ++ACGEFHTCAVT +GDLY
Sbjct: 277 ITRQAEVFTWGEECSGRLGHGAGTSIFQPRLLESLSICNVEIIACGEFHTCAVTATGDLY 336

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           TWGDG HN GLLG  S +SHWIP++VSG +EGLQ+S++ CG WHTA ITS+G+L+TFGDG
Sbjct: 337 TWGDGTHNAGLLGHGSTVSHWIPKRVSGPLEGLQVSTVSCGTWHTALITSSGQLYTFGDG 396

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
           TFGALGHG+R + S P+EVE+LK L+T+  SCGVWH+AA+VEV    S +   SS KLFT
Sbjct: 397 TFGALGHGNRETISYPKEVESLKGLRTISVSCGVWHSAAVVEVIMTQSNA---SSGKLFT 453

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WGDG + +LGHGD   ++ P CV    D +F K ACGH++TI LT +G +F++GS+ YGQ
Sbjct: 454 WGDGDKYRLGHGDRSAKLKPTCVPSLIDYNFHKSACGHTLTIGLTTSGHMFTVGSSVYGQ 513

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG+P + G++P  +E  +    + ++ACGSYH+AV+++  EVYTWGKGANG+LGHGD  +
Sbjct: 514 LGNPNNDGRYPRLVEDKVGGGGVVEVACGSYHVAVLTNTGEVYTWGKGANGRLGHGDIAD 573

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYN 670
           ++ PTLVEALRD+ VK + CGS+FTAAI  HK VS  + S CS CR  F F R+RHNCYN
Sbjct: 574 RKVPTLVEALRDRSVKRIACGSSFTAAISQHKWVSGVEQSQCSACRQPFGFTRKRHNCYN 633

Query: 671 CGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESG---SNSQIPR-----N 722
           CGLV+C  CSSKK+++ AL+P   KPYRVCD C++KL+   +SG   S + IPR      
Sbjct: 634 CGLVHCHSCSSKKALRAALSPNPGKPYRVCDSCYMKLSKVLDSGVSYSRNTIPRIPGDTK 693

Query: 723 SSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNKISA 782
           +  +     RV    + +     D ++  + K    +P      Q + +  F+    ++ 
Sbjct: 694 AERMDTKATRVASATSSDMIKNLDVKAAKQTKKSDHAPQFPAILQLK-DIPFVGPGDLNN 752

Query: 783 SPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQ 842
           +  GS  VS   S  +R +     +   + +   +SE I  + ++ N+   QE   LRA+
Sbjct: 753 T--GS-TVSNGYSNDTRYAPQILRMPHLNSSSSLSSESIESF-REANELLKQEVQKLRAE 808

Query: 843 LEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
           +  L ++ +  + EL+++  K  E   +A EE  K+KAA+EVI+SLTAQ +
Sbjct: 809 VSSLRQEREQQDNELQKSEAKAHEAVTLAAEEVSKSKAAKEVIKSLTAQVK 859


>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
          Length = 1082

 Score =  716 bits (1848), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/890 (44%), Positives = 548/890 (61%), Gaps = 62/890 (6%)

Query: 16  QAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPGQRT 75
           QA+  LKKGT LLKYGR+GKPKF PFRLS+DE  LIW +  +EK LKLS VSR++ GQRT
Sbjct: 34  QALIALKKGTQLLKYGRKGKPKFTPFRLSNDESTLIWVSNNKEKSLKLSSVSRVLSGQRT 93

Query: 76  AVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCKSRSDS 133
            VFQR+  PEK++ SFSLIY +  RSLDLICKDK EAE+WF  L  LIS           
Sbjct: 94  LVFQRFLLPEKDHLSFSLIYNDGKRSLDLICKDKVEAEVWFAGLNVLIS----------- 142

Query: 134 ISSDSPRSHTQKNSPSHVSSISSDLTNKDSG--DTQPILVAYENSPQNRLGKAFSEVLSF 191
                P  H  ++   H+  I +   + + G   +     AY          +F   LS 
Sbjct: 143 -----PGQHGSQHQ--HIDGIRNGALSFECGRDSSLSSSSAYTTD-------SFENKLSS 188

Query: 192 TAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDG 251
             +AK  +  E       +     + D   + +++D  RIS+SSA+S+SS GS  +D + 
Sbjct: 189 ANSAKDRSSGE-----FTYSERTDVSDMQVKGASSD-IRISVSSALSTSSHGSG-DDSES 241

Query: 252 LGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
            GDV++WGE + +       +    S+    D L+PK LES V+LD   +ACG KHA LV
Sbjct: 242 FGDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALV 301

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           T+Q ++F+WGE   G+LGHG    +  P+L+++L+  N+  +ACGEFHTCA+T +GDLYT
Sbjct: 302 TRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTCAITATGDLYT 361

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WGDG HN GLLG  S +SHWIP++VSG +EGLQ+S++ CG WHTA ITS+GKL+TFGDGT
Sbjct: 362 WGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGTWHTALITSSGKLYTFGDGT 421

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           FG LGHG+R + S P+EVE+LK L+T+  SCGVWHTAA+VEV    S +   SS KLFTW
Sbjct: 422 FGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNT---SSGKLFTW 478

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           GDG + +LGHGD   ++ P CV    D +F K  CGH++TI LT +G +F+ GS+ YGQL
Sbjct: 479 GDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGSSVYGQL 538

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
           G+P + G++P  +E  +    + ++ CG+YH+AV++   EVYTWGKGANG+LGHGD  ++
Sbjct: 539 GNPNNDGRYPRLVEEKLGGGGVVEVVCGAYHVAVLTQSGEVYTWGKGANGRLGHGDIADR 598

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNC 671
           +TPT VEALRD+ VK + CGS FTAAIC HK VS  + S CS CR  F F R+RHNCYNC
Sbjct: 599 KTPTFVEALRDRSVKRIACGSGFTAAICQHKSVSGMEQSQCSSCRQPFGFTRKRHNCYNC 658

Query: 672 GLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESG------SNSQIPRNSSG 725
           GLV+C  CSSKK+++ AL+P   KPYRVCD C++KL+   +SG      +  +IP +S  
Sbjct: 659 GLVHCHSCSSKKALRAALSPNPGKPYRVCDSCYLKLSKVLDSGIGHNKNNTPRIPGDSKA 718

Query: 726 LFQNCK--RVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNKISAS 783
              + K  RV    + +     D ++  + K Y   P      Q + +  FI +      
Sbjct: 719 DKMDSKGNRVASANSSDMIKNLDVKAAKQTKKYDYPPQFPAILQLK-DIPFIGA------ 771

Query: 784 PPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQL 843
                   + P+  S  SSP   +   + +  + S   F+  +  N+   QE   L+ ++
Sbjct: 772 ------ADQQPND-STYSSPLLRLPNLN-SSSSLSSESFDILRDANELLKQEVQKLKEEV 823

Query: 844 EDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
             L ++ +  + +L+++  K  E   +A EEA K+KAA++VI+SLTAQ +
Sbjct: 824 NSLRQQREQQDADLQKSEAKAHEAMTLASEEASKSKAAKDVIKSLTAQLK 873


>gi|356536635|ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max]
          Length = 1078

 Score =  716 bits (1848), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/928 (42%), Positives = 556/928 (59%), Gaps = 110/928 (11%)

Query: 11  ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
           ERD EQA   LKKGT L+KY R+GKPK C FR+SSDE  LIW +   EK LKLS VSRII
Sbjct: 11  ERDIEQAFITLKKGTQLVKYSRKGKPKLCTFRISSDETKLIWISHGREKNLKLSSVSRII 70

Query: 71  PGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCK 128
           PGQRTAVF+RY +PEK+Y SFSLIY+   RSLDLICK++ E E+WF++L+ALIS   R +
Sbjct: 71  PGQRTAVFRRYLRPEKDYLSFSLIYKKGERSLDLICKNQAEVEVWFSSLKALISPGERIR 130

Query: 129 SRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEV 188
             +  +S+DS                  DL   D                    + ++  
Sbjct: 131 RGTSDLSNDS-----------------VDLIPND--------------------RPYAGT 153

Query: 189 LSFTAA-AKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
           L F ++ A+     ESVS       S    +   R+S  D  R+S+SS   SSS GS  +
Sbjct: 154 LEFASSIARGRFSFESVSHESTSSWSRSETNMPVRTSCGDGSRVSVSSVSHSSSVGSGLD 213

Query: 248 DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
           D + LGDV+IWGE   +G     + G ++ +  + D L PK LES VVLD   I  G +H
Sbjct: 214 DIESLGDVYIWGEVWADGNSFDGL-GSQLQAFCKTDVLTPKPLESDVVLDVHQIGPGDRH 272

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
             LVT+QG++F+WGE SGG+LGHG E D   P L+++L  +N+  VACGE+H+CAV+ SG
Sbjct: 273 IALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITNVTFVACGEYHSCAVSTSG 332

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           DL+TWGDG H  GLLG  +++S+WIP++VSG +EGLQ+ ++ CG WH+A  TS GKLFTF
Sbjct: 333 DLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVAVACGTWHSALATSNGKLFTF 392

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           GDG FG LGHG+R+S + P+EV+ L   K +  +CGVWH+AAI++V    SGS   S+K+
Sbjct: 393 GDGRFGVLGHGNRASVAYPKEVQLLSGYKAIKVACGVWHSAAIIDVM-DLSGSKA-SAKR 450

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           LFTWGDG + +LGH + E  + P CV    + +F +VACG+++T+ALTA+G VFSMG   
Sbjct: 451 LFTWGDGDQYRLGHANKETYLEPTCVAAVAEYNFHQVACGYTMTVALTASGHVFSMGGTT 510

Query: 548 YGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
           YGQLG+P S GK P  +   +   ++E+I+CG+ H+AV++S+SE+YTWG+GANG+LGHGD
Sbjct: 511 YGQLGNPNSDGKVPILVRDKLVGEFVEEISCGANHVAVLTSRSELYTWGRGANGRLGHGD 570

Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHN 667
            ++K++PTLVEAL+D+ VK++ CGS FT+ ICLHK VS  D S+CS CR  F F R+RHN
Sbjct: 571 TDDKKSPTLVEALKDRHVKNISCGSTFTSCICLHKWVSGVDQSVCSDCRQPFGFTRKRHN 630

Query: 668 CYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLN-TTSESGSNSQIPRNSSGL 726
           CY+CGLVYC  CSSKK+ K ALAP  +KP+RVCD C+ KL  + S S  N +I R SS +
Sbjct: 631 CYHCGLVYCHPCSSKKASKAALAPTPSKPHRVCDACYAKLKGSDSASDFNREISRPSSSV 690

Query: 727 FQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNKISASPPG 786
           +                          +S+H     + +    P ++ +K  +I  + PG
Sbjct: 691 YGR------------------------ESFHRGEVRSSRVLLPPTTEPVKYLEIRTNKPG 726

Query: 787 SR-------RVSRAPSPISRKSSPACSITMNSFTDLAN---------------------- 817
           +        R ++ P+ +  K   A  I+++S  ++                        
Sbjct: 727 NMHDFSSIVRAAQVPTSLQLKDV-AFPISLSSAQNVYKPVIQPTPPTPATPIPMSPYARR 785

Query: 818 ------------SEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLK 865
                       S  + +  ++ ND+ NQ+    +   ++L +KS   ++++    + ++
Sbjct: 786 PPSPPRSTSPGFSRSLIDNLRKKNDHLNQQVSKWQNNNQNLKQKSDMQDMKIRELQKNIE 845

Query: 866 ETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
           E      EE+ K + A+E+I+SLT + R
Sbjct: 846 EAVSRVGEESSKLRKAKELIKSLTDKLR 873


>gi|356501809|ref|XP_003519716.1| PREDICTED: uncharacterized protein LOC100778984 [Glycine max]
          Length = 1122

 Score =  708 bits (1828), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/940 (42%), Positives = 557/940 (59%), Gaps = 117/940 (12%)

Query: 1   MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ 60
           +ASF  +   ERD EQA   LKKGT L+KY R+GKPK C FRLSSDE  LIW +   EK 
Sbjct: 48  LASFGSH---ERDVEQAFITLKKGTQLVKYSRKGKPKLCTFRLSSDETKLIWISHGREKN 104

Query: 61  LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALR 118
           LKLS VS IIPGQRTAVF+RY +PEK+Y SFSLIY+   RSLDLICKD+ E E+WF++L+
Sbjct: 105 LKLSSVSHIIPGQRTAVFRRYLRPEKDYLSFSLIYKKGERSLDLICKDQAEVEVWFSSLK 164

Query: 119 ALISEDNRCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQ 178
           ALIS   R +     +S++S            V  I +D  N  +               
Sbjct: 165 ALISRGERIRRGKSDLSNES------------VDLIPNDRPNAGT--------------- 197

Query: 179 NRLGKAFSEVLSFTAA-AKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAV 237
                     L F ++ A+     ESVS       S    +   R+S  D  R+S+SS  
Sbjct: 198 ----------LEFASSIARGRFSFESVSHESTSSCSRSDTNMPVRTSCGDGSRVSVSSVS 247

Query: 238 SSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLD 297
            SSS GS  +D + LGDV+IWGE   +G    + +G+   ++ + D L PK LES VVLD
Sbjct: 248 HSSSVGSGLDDIESLGDVYIWGEVWVDG---NSSDGLGSLASCKTDVLTPKPLESDVVLD 304

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
              I  G +H  LVT+QG++F+WGE SGG+LGHG E D   P L+++L  +N+  VACGE
Sbjct: 305 VHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLAITNVTFVACGE 364

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           +H+CAV+ SGDL+TWGDG H  GLLG  +++S+WIP++VSG +EGLQ+ S+ CG WH+A 
Sbjct: 365 YHSCAVSSSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVSVACGTWHSAL 424

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
            TS GKLFT GDG FG LGHGDR S + P+EV+ L   K +  +CGVWH+AAI+EV G  
Sbjct: 425 ATSNGKLFTIGDGRFGVLGHGDRDSVAYPKEVQLLSGHKAIKVACGVWHSAAIIEVMG-P 483

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
           SGSN  S+K+LFTWGDG + +LGH + E  + P CV    + +F +VACG+++T+ALT +
Sbjct: 484 SGSN-TSAKRLFTWGDGDQYRLGHVNKETYLEPTCVAAVAEYNFHQVACGYTMTVALTTS 542

Query: 538 GQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
           G VF+MG   YGQLG+P S GK P  + G +   ++E+I+CG+ H+AV++S+SE+YTWG+
Sbjct: 543 GHVFTMGGTAYGQLGNPNSDGKVPILVRGKLVGEFVEEISCGANHVAVLTSRSELYTWGR 602

Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRN 657
           GANG+LGHGD +++++PT+VEAL+D+ +K++ CGS FT+ ICLHK VS  D S+CS CR 
Sbjct: 603 GANGRLGHGDTDDQKSPTMVEALKDRHIKNISCGSTFTSCICLHKWVSGVDQSVCSDCRQ 662

Query: 658 QFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLN-TTSESGSN 716
            F F R+R NCY+CGLVYC  CSSKK+ K ALAP  +KP+RVCD C+ KL  + S S  N
Sbjct: 663 PFGFTRKRRNCYHCGLVYCHPCSSKKASKAALAPTPSKPHRVCDACYAKLKGSDSASNFN 722

Query: 717 SQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIK 776
             I R SS ++                          +S+H     + +    P  + +K
Sbjct: 723 RDISRPSSSIYGR------------------------ESFHRGEVRSSRVLLPPTIEPVK 758

Query: 777 SNKISASPPGSR-----RVSRAPSPISRKSSPACSITMNSFTDLAN-------------- 817
             +I  + PGS      R ++ P+ +  K   +  I+++S  ++                
Sbjct: 759 YLEIRTNKPGSTHDSIVRAAQVPTSLQLKDV-SFPISLSSVQNVYKPVIQPSQPPTPPTS 817

Query: 818 ------------------------SEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFL 853
                                   S  + +  ++ ND+ NQE    + + ++L +KS   
Sbjct: 818 ATPIPMSPYARRPPSPPRSTSPGFSRSLIDNLRKKNDHLNQEVTKWQNKNQNLEQKSDMQ 877

Query: 854 EVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
           +++++   + ++E      EE+ K + A+E I+SL  + R
Sbjct: 878 DMKIQELQKNIEEAMSQFGEESSKLREAKEFIKSLADKLR 917


>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
          Length = 848

 Score =  699 bits (1804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/687 (51%), Positives = 479/687 (69%), Gaps = 38/687 (5%)

Query: 16  QAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPGQRT 75
           +A+  LKKGT L+KY RRGKPK   FRLSSDE  LIW++ K+EK L+LS V++IIPGQRT
Sbjct: 6   KALITLKKGTKLIKYSRRGKPKIRAFRLSSDETSLIWFSHKKEKFLRLSSVTKIIPGQRT 65

Query: 76  AVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCKSRSDS 133
           AVF R+  PEK+Y SFSLI++N  RSLDL+CKD+ E E+WF+AL  LIS           
Sbjct: 66  AVFGRFLHPEKDYLSFSLIFKNGQRSLDLVCKDQAEVEVWFSALEGLIS----------- 114

Query: 134 ISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLSFTA 193
               S R  +  N      S S ++T               +S  + L  A +  LSF +
Sbjct: 115 ----SFRKKSLINEHKDRVSFSEEVTYYQD----------RHSYDSTLDIASNISLSFNS 160

Query: 194 AAKAYTRAESVSKSLNFVASGGLDDANS-RSSTADSFRISLSSAVSSSSQGSCHEDFDGL 252
           A    T + S  KS       G D  N  R+S ADS R+S+SSA+SS SQGS  +D + L
Sbjct: 161 AGYCGTNSFSFRKS-----DVGFDRLNMIRTSAADSSRVSISSALSSYSQGSGTDDIESL 215

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           GDV++WGE   +       +G   SS  + D L+PK LES VVLD   IACG++H  L T
Sbjct: 216 GDVYVWGEVWTDVT---PSDGHTSSSCSKVDVLIPKPLESDVVLDVNQIACGTRHVALTT 272

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           +QG++F+WGE  GG+LGHG +AD+S PKL+++L+ + + +++CGEFHTCAVT SGDL+ W
Sbjct: 273 RQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTTSGDLFNW 332

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           GDG +N+GLLG  +E+S+W+P+KVSG +EGLQ+ S+ CG WH+A  TS+GKL+TFGDGTF
Sbjct: 333 GDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLYTFGDGTF 392

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           G LGHGDR + + P+EVE L   KT+  +CG+WH+AAIVEV  +T G+N + SKKL+TWG
Sbjct: 393 GVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAIVEVTNQT-GAN-VMSKKLYTWG 450

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
           DG + +LGHGD EPR+VP CV+   +  F ++ACGH++T+AL  +G+VF+MGS+  GQLG
Sbjct: 451 DGDKNRLGHGDKEPRLVPKCVQALLEYDFHQLACGHNMTVALATSGRVFTMGSSSNGQLG 510

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
           +P S GK P  ++  +    +E+I+CG+ H+ V++S+SEVYTWG GANG+LGHGD ++++
Sbjct: 511 NPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGDLKDRK 570

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNCG 672
            P LVEAL+D+ VKS+ CGSNFT  IC+HK VS AD S+C+GCR  F F R+RH+CYNCG
Sbjct: 571 KPCLVEALKDRHVKSISCGSNFTTCICIHKWVSGADQSVCTGCRQAFGFTRKRHDCYNCG 630

Query: 673 LVYCKLCSSKKSMKTALAPEINKPYRV 699
           LV+C  CSS+K +K ALAP   KP+R+
Sbjct: 631 LVHCHACSSRKVLKAALAPTPGKPHRL 657


>gi|222632434|gb|EEE64566.1| hypothetical protein OsJ_19418 [Oryza sativa Japonica Group]
          Length = 1002

 Score =  691 bits (1784), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/916 (42%), Positives = 545/916 (59%), Gaps = 125/916 (13%)

Query: 17  AVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPGQRTA 76
           A+  LKKG+ L+KY R+GKPK   FRLSSDE  L+WY+  +EK L+LS VS++IPGQRTA
Sbjct: 12  ALITLKKGSKLIKYSRKGKPKIREFRLSSDENTLVWYSHNKEKCLRLSSVSKVIPGQRTA 71

Query: 77  VFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCKSRSDSI 134
           VF+R+ +PEK+Y SFSLIY+N  RSLDL+CKD+ E E+WF+ L +LI+            
Sbjct: 72  VFRRFLRPEKDYLSFSLIYKNGQRSLDLVCKDQAEVEVWFSTLESLIT------------ 119

Query: 135 SSDSPRSHTQKNSPSHVSSISSDLT-NKDSGDTQPILVAYENSPQNRLGKAFSEVLSFTA 193
              S R +   +  +   S S D+T  +DS        +Y+ +    L  A S   SF +
Sbjct: 120 ---SCRLNFLNDGQTDRVSFSEDVTIYQDS-------TSYDTT----LDIASSITRSFNS 165

Query: 194 AAKAYTRAESVSKSLNFV-ASGGLDDANS-RSSTADSFRISLSSAVSSSSQGSCHEDFDG 251
           A        S   SLN + A  G D  N  R+ST D+ R+S+SSA SSSSQ S  +D + 
Sbjct: 166 AGY------STPNSLNSIRADVGSDRVNMLRASTGDNSRVSISSAPSSSSQSSGLDDIES 219

Query: 252 LGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           LGDV++WGE                                        IACGS+H  L 
Sbjct: 220 LGDVYVWGE---------------------------------------QIACGSRHIGLT 240

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           T+QG++F+WGE  GG+LGHG + D+  PKL+++L  SN+  +ACGEFHTC VT SGDLY 
Sbjct: 241 TRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLAVSNVEYIACGEFHTCVVTASGDLYD 300

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WGDG +N GLLG  + +SHW+P++VSG +EGLQ+ S+ CG WH+A   S+GKLFTFGDGT
Sbjct: 301 WGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWHSALTMSSGKLFTFGDGT 360

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           FG+LGHGDR S + P+EVE L   + +  +CGVWH+AAIVE++G+ S +N +S +KLFTW
Sbjct: 361 FGSLGHGDRESVAYPKEVEALSGFRAMKVACGVWHSAAIVEISGQAS-TNAMS-RKLFTW 418

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           GDG + +LGHGD E ++VP CV+   D +F +VACGHS+T+AL  +G VF+MGS++ GQL
Sbjct: 419 GDGDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATSGHVFTMGSSNNGQL 478

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
           G+P + GK P  ++  + +  +E+I+CGS H+A ++S+SEVYTWG GANG+LGHG  E+K
Sbjct: 479 GNPKADGKQPCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDK 538

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNC 671
           + PTLV+AL+D+ VKS+ CGSNFT  IC+HK VS AD S+CSGCR  F F R+RHNCYNC
Sbjct: 539 KKPTLVDALKDRHVKSISCGSNFTTCICIHKWVSGADQSVCSGCRQPFGFTRKRHNCYNC 598

Query: 672 GLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRNSSGLFQNCK 731
           GLV+C  CSS+K +K ALAP   KP+RVCD CF+KL        +S   RN         
Sbjct: 599 GLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFMKLKAADTGVISSYNKRN--------- 649

Query: 732 RVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNKISASPPGSRRVS 791
            V  + +++ +   +       +    SP+   K+Q   N   +++    A P    + S
Sbjct: 650 -VITRRSIDIKDKLERPEIRPSRLATTSPAEPVKYQETKN---VRNETKPADPMSMMKAS 705

Query: 792 RAPSPISRK---------SSPACSITMNSFTDLANSEVIFEYS----------------- 825
           + P+ +  K         + P    +M     +     +F  S                 
Sbjct: 706 QVPAMLQFKDMAFAGTFGTVPTTVKSMTMGGQMQMGMPMFSPSPPSKKPSPPPATASPLI 765

Query: 826 --------KQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEK 877
                   K+TN+  NQ+   L++Q+  L +K +  + +L++  RK K+   +A EE+ +
Sbjct: 766 GKVDNDGLKKTNELLNQDISKLQSQVNKLKQKCETQDEQLQKAERKAKQAASMASEESAR 825

Query: 878 NKAAQEVIRSLTAQAR 893
                + ++ L ++ +
Sbjct: 826 RNTVLDFVKHLDSELK 841


>gi|414878660|tpg|DAA55791.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 964

 Score =  690 bits (1781), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/759 (52%), Positives = 509/759 (67%), Gaps = 50/759 (6%)

Query: 161 KDSGDTQPILVAYENSPQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDAN 220
           +D  D   +   Y + P+N L KAFS+V+ +    + +  ++S + S++ ++SG  D+ N
Sbjct: 70  EDGSDNYRLRTPYGSPPKNGLEKAFSDVMLYAVPPRGFFPSDSNAGSVHSMSSGQSDNTN 129

Query: 221 --SRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISS 278
             SR    D+FR+S SSAVSSSS GS H+D D LGDVFIWGEG G G+LGG  + V  SS
Sbjct: 130 GHSRGVPMDAFRVSYSSAVSSSSHGSGHDDGDALGDVFIWGEGTGEGILGGGGSRVGSSS 189

Query: 279 ADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY 338
             + D L+PK LE  V LD Q+I+CG +HA LVTKQ                        
Sbjct: 190 GAKMDCLVPKPLEFAVRLDVQNISCGGRHAALVTKQA----------------------- 226

Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
            KLIDAL+  NI +VACGE+HTCAVTLSGDLYTWGDG    GLLG  +++SHW+P+ V+G
Sbjct: 227 -KLIDALSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNG 285

Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV 458
            +EG+ +SSI CGPWHTA +TSAG+LFTFGDG+FG LGHGDR S SVPREVE+LK L+TV
Sbjct: 286 PLEGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHGDRESISVPREVESLKGLRTV 345

Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
            A+CGVWHTAA+VEV    S S+  SS K+FTWGDG +G+LGHGD EP++VP CV    +
Sbjct: 346 RAACGVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKLVPTCVAALVE 405

Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIAC 578
            +FC+VACGH +T+ALT +G V++MGSA YGQLG+  + G  P R+EG +   ++E+I+C
Sbjct: 406 PNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNAQADGMLPVRVEGKLYKNFVEEISC 465

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G+YH+AV++S++EVYTWGKGANG+LGHGD E+K TPTLVEAL+DKQV++VVCG NFTAAI
Sbjct: 466 GAYHVAVLTSRTEVYTWGKGANGRLGHGDTEDKNTPTLVEALKDKQVRNVVCGINFTAAI 525

Query: 639 CLHKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYR 698
           C+HK VS  D S+CSGCR  FN RR+RHNCYNC LV+C  CSSKKS+K +LAP  NKPYR
Sbjct: 526 CIHKWVSGVDQSMCSGCRQPFNLRRKRHNCYNCALVFCHSCSSKKSLKASLAPNGNKPYR 585

Query: 699 VCDDCFIKLNTTSESGSN------SQIPRNSSGLFQNCK-----RVTEKENMNSRSATDG 747
           VCD C+ KL    E+  +      + +P  S  + ++ +     +++   +M S    D 
Sbjct: 586 VCDTCYSKLTKGLETDMHFSAKRAATVPGFSDTIEEDLETRSNAQLSRLSSMESFKHLDS 645

Query: 748 QSKPKGKSYH-----ASPSLNGKFQWEP-------NSDFIKSNK-ISASPPGSRRVSRAP 794
           +   K K +       SP  NG   W         N  F  S K  SAS PGSR VSRA 
Sbjct: 646 RYSKKNKKFEFNSTRVSPVPNGSSHWSGLNISRSFNPVFGSSKKFFSASVPGSRIVSRAT 705

Query: 795 SPISRKSSPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLE 854
           SPISR++SP  S T         S  +    K TND  +QE   LR+Q+E LTRKSQ LE
Sbjct: 706 SPISRRTSPPRSTTPTPTLGGLTSPRVPTDGKPTNDALSQEVLNLRSQVESLTRKSQLLE 765

Query: 855 VELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
           +ELERT+++LKE   IA EE  K KAA+EVI+SLTAQ +
Sbjct: 766 LELERTTKQLKEAISIAGEETAKCKAAKEVIKSLTAQLK 804


>gi|147857410|emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
          Length = 1156

 Score =  669 bits (1726), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/928 (42%), Positives = 545/928 (58%), Gaps = 55/928 (5%)

Query: 8   ILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVS 67
           +  +R  EQA+  LKKG YLL+ GRRGKPKFCPFRLS+DEK LIWY+G+EEKQL+LS ++
Sbjct: 9   VPFDRAVEQAIVTLKKGAYLLRCGRRGKPKFCPFRLSTDEKFLIWYSGQEEKQLRLSSIT 68

Query: 68  RIIPGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDN 125
           +IIPGQRT  FQR  Q E+E +SFSL+Y N  RSLDLICKDK +A+ WF  L+A+IS   
Sbjct: 69  KIIPGQRTVNFQRQLQEERECRSFSLVYANGERSLDLICKDKAQADSWFLGLKAVIS--- 125

Query: 126 RCK-SRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLG-K 183
           RC+  R  S   +     T  NSP+       +L   +       + +   SP   L  +
Sbjct: 126 RCQHPRQLSTFRNCVGVQTCFNSPAGYFRRKHNLGLLEDTPKFSQVRSLCGSPTQSLSER 185

Query: 184 AFSEVLSFTAAAKAYTRAES------VSKSLN---FVASGGLDDANSRSSTADSFRISLS 234
            FS+ LS++A +   + +        V  SL    +V    L       +  +     LS
Sbjct: 186 CFSDGLSYSADSFYSSESSVSNVKNVVDVSLPSSPYVEPDHLKQGEEIYAGTEIQTDMLS 245

Query: 235 SAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTV 294
              + S      E  D L DV IWGEG+  G+LGG V      +  + DALLPK+LEST 
Sbjct: 246 QVAAPSHASPQMEKNDILRDVMIWGEGIEGGILGGGVYRFGNQNGMQSDALLPKLLESTT 305

Query: 295 VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA 354
           +LD + I+ G KHA LVTK G++F WGEGSGG LGH V  D+  PK++++L G  +  V+
Sbjct: 306 MLDVREISLGGKHAALVTKHGEVFCWGEGSGGXLGHKVNMDMGNPKIVESLTGVLVKSVS 365

Query: 355 CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
           CGE+ TCA+T SG+LYTWGD    + L+G+  + S WIP ++SG + G  IS++ CG WH
Sbjct: 366 CGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWH 425

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            A ++++G+LFT+GDGTFG LGHG   S S P+EVE+L  L    A+CG WHTAAIVEV 
Sbjct: 426 MAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVEVR 485

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                 N     KLFTWGDG +G+LGHGD E +++P CV    D  F +V+CG  +T+ L
Sbjct: 486 ADRLKFN-TKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDHDFVQVSCGRMLTVGL 544

Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
           T  G V++MGSA +GQLG+P +  K    + G +K  ++++I+ GSYH+A ++SK  +YT
Sbjct: 545 TCLGTVYTMGSAVHGQLGNPQAKDKSIAIVGGKLKDEFVKEISSGSYHVAALTSKGSLYT 604

Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSG 654
           WG GANGQLG GD E++ +P +VEALRD+QV+S+ CGS FTAAICLHK +S  D S CSG
Sbjct: 605 WGMGANGQLGLGDTEDRNSPAVVEALRDRQVESIACGSGFTAAICLHKSISSTDQSACSG 664

Query: 655 CRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESG 714
           CR  F F R++HNCYNCGL++C+ CS+KK +  +LAP   KP+RVCD C+  L     S 
Sbjct: 665 CRMAFGFTRKKHNCYNCGLLFCRACSNKKVLNASLAPNKKKPFRVCDPCYTYLQRIKHSS 724

Query: 715 SNSQIPRNSSGLFQNCKRVT--EKENMNSRSATDGQSKPKG-------KSYHASPSLN-- 763
              ++  ++       ++ +  EKE+    +    Q    G       +SY   P  N  
Sbjct: 725 RLLKLENHNPRQLLMTQKTSFDEKEDRGEGTPARTQFSSVGQPCNEASQSYEKKPFKNQV 784

Query: 764 -GKFQWEPNS-------------------DFIKSNKISASPPGSRRVSRAPSPISRKSSP 803
             +   EP S                    + + N I+  P  + ++S    P+  K SP
Sbjct: 785 ENQQTVEPVSSLSNGLPRWGQVPCPFLFEKYCRENSIALVPLSNNQLSSV--PLCWKHSP 842

Query: 804 ACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRK 863
             S  M S   + N E  F     T+    +E + LR++   L +  Q    +++   +K
Sbjct: 843 RGSKYMVS--TVVNMEKDF---PDTDKILIEEVERLRSEARSLEKLCQMRSEKIQECQQK 897

Query: 864 LKETTQIAQEEAEKNKAAQEVIRSLTAQ 891
           L+ET  +A+EEA K KAA+EVI++L+++
Sbjct: 898 LQETWSLAREEAAKCKAAKEVIKALSSR 925


>gi|413951231|gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 959

 Score =  664 bits (1712), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/695 (48%), Positives = 476/695 (68%), Gaps = 27/695 (3%)

Query: 220 NSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSA 279
           +++ +++D+ R+S SSA S+SS GS  +D+D  GDV++WGE + +  +    + V I S 
Sbjct: 2   HTKGASSDAIRVSTSSAPSTSSHGSAQDDYDSSGDVYVWGEVICDNTVRVGPDTV-IRST 60

Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
            + D LLPK LES +VLD   + CG KHA LVTK G++F+WGE SGG+LGHG   D  +P
Sbjct: 61  AKADFLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHP 120

Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ 399
           +L+++L   N+ +VACGEFHTCAVT SG+LYTWGDG HN+GLLG  +++SHWIP+++SG 
Sbjct: 121 RLVESLAICNVDIVACGEFHTCAVTTSGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGV 180

Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
           +EG Q++ + CG WHTA +TS G+LFTFGDGTFG LGHG+R S S PREVE+L  LKT+ 
Sbjct: 181 LEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIA 240

Query: 460 ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
            +CGVWHTAA+VEV   T  S+ +SS KLFTWGDG + +LGHGD EP++ P CV    D 
Sbjct: 241 VACGVWHTAAVVEVI-VTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASLIDY 299

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
            FC++ACGHS+T+ LT +GQV SMG+  YGQLG+P S GK P  IE +I   ++  +ACG
Sbjct: 300 DFCRIACGHSLTVGLTTSGQVLSMGNTVYGQLGNPRSDGKLPCLIE-DIMGEHVVQVACG 358

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
           SYH+AV+++KSEV+TWGKGANG+LGHGD E+++ PTLVE+LRD+ V+ + CGSNFT+AIC
Sbjct: 359 SYHVAVLTNKSEVFTWGKGANGRLGHGDVEDRKIPTLVESLRDRAVRHIACGSNFTSAIC 418

Query: 640 LHKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRV 699
            HK VS A+ S C+ CR  F F R+RHNC+NCGLV+C  C+S K ++ ALAP   KPYRV
Sbjct: 419 QHKWVSGAEQSQCASCRQPFGFTRKRHNCHNCGLVHCNACTSHKVLRAALAPNPAKPYRV 478

Query: 700 CDDCFIKLNTTSESGSNSQ----IPRNSSGLFQNCK--RVTEKENMNSRSATDGQSKPKG 753
           CD CF+KLN+ + S + ++    +PR+S     + K  R     N++   + D ++  +G
Sbjct: 479 CDSCFMKLNSAAYSSTINKKKEVVPRHSGESNHDAKLARAIVPSNLDMIRSLDSKAAKQG 538

Query: 754 K-----SYHASPSLNGKFQWEPNSDFIKSNKISASPPGSRRV---------SRAPSPISR 799
           K     S+  +P ++   Q     D   S  I  +    R V         SRA SP SR
Sbjct: 539 KKTDALSFLRTPQMSSLLQLR---DITLSGGIDLNKSVPRAVRTSVRSLNSSRAVSPFSR 595

Query: 800 KSSPACSITMNSFTD-LANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELE 858
           K SP  S T    T  L+ ++   +   +TN+  +QE + LRAQ+++L R+ +  E+EL+
Sbjct: 596 KPSPPRSTTPVPTTHGLSIAKTAADSLAKTNEMLSQEVERLRAQVDNLRRRCELQELELQ 655

Query: 859 RTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
           ++++K++E   +  EE+ K+KAA+EVI+SLT+Q +
Sbjct: 656 KSAKKVQEAMSMVSEESAKSKAAKEVIKSLTSQLK 690


>gi|242055697|ref|XP_002456994.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
 gi|241928969|gb|EES02114.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
          Length = 870

 Score =  663 bits (1711), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/695 (48%), Positives = 476/695 (68%), Gaps = 27/695 (3%)

Query: 220 NSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSA 279
           +++ +++D+ R+S SSA S+SS GS  +D+D  GDV++WGE + +  +    + V I S 
Sbjct: 2   HTKGASSDAIRVSTSSAPSTSSHGSAQDDYDSSGDVYVWGEVICDNTVRVGPDTV-IRST 60

Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
            + D LLPK LES +VLD   + CG KHA LVTK G++F+WGE SGG+LGHG   D  +P
Sbjct: 61  GKADFLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHP 120

Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ 399
           +L+++L   N+ +VACGEFHTCAVT +G+LYTWGDG HN+GLLG  +++SHWIP+++SG 
Sbjct: 121 RLVESLAICNVDIVACGEFHTCAVTTAGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGA 180

Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
           +EG Q++ + CG WHTA +TS G+LFTFGDGTFG LGHG+R S S PREVE+L  LKT+ 
Sbjct: 181 LEGHQVAYVSCGTWHTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGLKTIA 240

Query: 460 ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
            +CGVWHTAA+VEV   T  S+ +SS KLFTWGDG + +LGHGD EPR+ P CV    D 
Sbjct: 241 VACGVWHTAAVVEVI-VTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY 299

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
            FC++ACGHS+T+ LT +GQ+ SMG+  YGQLG+P S GK P  +E +I   ++  +ACG
Sbjct: 300 DFCRIACGHSLTVGLTTSGQILSMGNTVYGQLGNPRSDGKLPCLVE-DIMGEHVVQVACG 358

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
           SYH+AV+++KSEV+TWGKGANG+LGHGD E+++ PTLVEALRD+ V+ + CGSNFT+AIC
Sbjct: 359 SYHVAVLTNKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRGVRHIACGSNFTSAIC 418

Query: 640 LHKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRV 699
            HK VS A+ S C+ CR  F F R+RHNC+NCGLV+C  C+S K ++ ALAP   KPYRV
Sbjct: 419 QHKWVSGAEQSQCASCRQPFGFTRKRHNCHNCGLVHCNACTSHKVLRAALAPNPAKPYRV 478

Query: 700 CDDCFIKLNTTSESGSNSQ----IPRNSSGLFQNCK--RVTEKENMNSRSATDGQSKPKG 753
           CD CF+KLN+ + S + ++    +PR+S     + K  R     N++   + D ++  +G
Sbjct: 479 CDSCFMKLNSAAYSSAVNKKKEAVPRHSGESNNDAKLARAIVPSNLDMIRSLDSKAAKQG 538

Query: 754 K-----SYHASPSLNGKFQWEPNSDFIKSNKISASPPGSRRV---------SRAPSPISR 799
           K     S+  +P ++   Q +   D   S  I  +    R V         SRA SP SR
Sbjct: 539 KKTDALSFLRTPQMSSLLQLK---DIALSGGIDMNKSVPRAVRTSVRSLNSSRAVSPFSR 595

Query: 800 KSSPACSITMNSFTD-LANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELE 858
           K SP  S T    T  L+ ++   +   +TN+  +QE + LRAQ+++L  + +  E+EL+
Sbjct: 596 KPSPPRSTTPVPTTHGLSIAKTAADSLAKTNEMLSQEVERLRAQVDNLRHRCELQELELQ 655

Query: 859 RTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
           ++++K++E   +  EE+ K+KAA+EVI+SLTAQ +
Sbjct: 656 KSAKKVQEAMSMVSEESAKSKAAKEVIKSLTAQLK 690


>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
 gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
          Length = 973

 Score =  662 bits (1708), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/923 (40%), Positives = 532/923 (57%), Gaps = 93/923 (10%)

Query: 11  ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
           +R  EQA+  +KKG +LLK GRRGK KFCPFRLS+DEK LIWY+G+EEKQL+LS V +I+
Sbjct: 12  DRTVEQAILAMKKGAHLLKCGRRGKLKFCPFRLSTDEKYLIWYSGQEEKQLRLSLVVKIV 71

Query: 71  PGQRTAVFQRYPQPEKEYQSFSLIYRN----RSLDLICKDKDEAELWFTALRALISEDNR 126
            GQRT    R  QP+KE QSFSLIY N    RSLDLICKDK +A+ WF  LRA+IS   R
Sbjct: 72  TGQRT----RQLQPDKENQSFSLIYTNGDRARSLDLICKDKAQADSWFIGLRAVIS---R 124

Query: 127 C-KSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAF 185
           C +SR   +  +   + +  NSP+       +L   +       + +   SP   L    
Sbjct: 125 CHRSRPICVLKNHRGAQSCVNSPAGFIRRKHNLGILEDDTELSQVRSLSGSPTQSLSDRG 184

Query: 186 SEVLSFTAAAKAYTRAESVSKSLN---FVAS--GGLDDANSRSSTADSFRISLSSAVSSS 240
                  ++   +    S+ +  N    + S    ++  N + + +D+       A S  
Sbjct: 185 ISDGLSLSSDSLFFSGSSLPQMQNVEDLLVSYIPNVEPQNLKKNGSDT-------AYSEF 237

Query: 241 SQGSCH------------EDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK 288
            + +CH            E  D L DV IWGEG+  G +G   N     +  + DALLPK
Sbjct: 238 QKNTCHRVIGLNHGSPRTEKKDILKDVLIWGEGVEVGNIGCVDNQFGYHNTKQVDALLPK 297

Query: 289 VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
           +LESTV+LD  +I+ G KHA L+TK+G++F WGEGS GKLGH V+ DVS PK++++L+G 
Sbjct: 298 LLESTVMLDVTNISLGRKHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPKMVESLDGV 357

Query: 349 NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSI 408
           ++  VACGE+ TCA+T SG+LY WG+  +   L  +    S W+PR++SG + G+ I ++
Sbjct: 358 HVKSVACGEYQTCALTDSGELYAWGENKYGANLGCEERSRSQWLPRRISGPLTGVCILNV 417

Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTA 468
            CG WHTA ++S+G+LFT+GDG+FG LGHG+  S S P+EVE+LK L     +CG WHTA
Sbjct: 418 ACGDWHTAIVSSSGQLFTYGDGSFGVLGHGNLLSVSQPKEVESLKGLLVKSVACGSWHTA 477

Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH 528
           AIV++       NG+  K LFTWGDG +G+LGH D E +++P CV    ++ F +V+CG 
Sbjct: 478 AIVDIIVDRFKFNGVGGK-LFTWGDGDKGRLGHADLEKKLLPTCVAQLVELDFDQVSCGR 536

Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
            +T+ALT TG+V++MGS+ +GQLG+P +  K    +EG +K  ++++I+ GSYH+A ++S
Sbjct: 537 MLTVALTNTGKVYTMGSSVHGQLGNPHAKDKSIVIVEGKLKEEFVKEISSGSYHVAALTS 596

Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIAD 648
              +YTWGKG NGQLG G+ E++  PTLVEALRD QV+S+ CGSN TAAICLHK +S++D
Sbjct: 597 SGSLYTWGKGTNGQLGLGNVEDRNFPTLVEALRDMQVQSIACGSNLTAAICLHKSISVSD 656

Query: 649 HSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLN 708
            S C GCR  F F R++HNCYNCGL++C+ CSSKK M  +LAP  +KP RVCD CF  + 
Sbjct: 657 QSACKGCRMPFGFTRKKHNCYNCGLLFCRACSSKKVMNASLAPNKSKPSRVCDSCFYSMQ 716

Query: 709 TTSESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQW 768
             +  G   Q+    S   +  +R T                         P   G+ Q 
Sbjct: 717 NITHPGHRLQLMSQPSLEIRPGERKT-------------------------PRNQGEKQQ 751

Query: 769 EPNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQT 828
              + F     ISA  P   +VS             C     S   + NSE+  E     
Sbjct: 752 HLETAF----SISAGLPQWGQVS-------------CPAIFESCY-IKNSELPLESKSSI 793

Query: 829 NDNFNQEPDV-------------LRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEA 875
           + + N E ++             LRAQ   L  + Q    ++E     +++T  +A+EEA
Sbjct: 794 SSSLNLEEELSDSKKMLIEEVKRLRAQARSLEMQCQTGSQKIEECQLTIEKTWFLAREEA 853

Query: 876 EKNKAAQEVIRSLTAQARPGSAL 898
            K KAA E+I++L  ++  G  L
Sbjct: 854 AKRKAANEIIKALALRSMDGREL 876


>gi|255571261|ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223534074|gb|EEF35792.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1086

 Score =  661 bits (1705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/908 (42%), Positives = 548/908 (60%), Gaps = 33/908 (3%)

Query: 11  ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
           +R  EQA+  LKKG +LLKYGRRGKPKFCPFRLS+DEK LIWY+G+EEKQLKLS V +I+
Sbjct: 17  DRTVEQAILALKKGAHLLKYGRRGKPKFCPFRLSTDEKYLIWYSGQEEKQLKLSSVMKIV 76

Query: 71  PGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCK 128
            GQRT  FQR  QP+KE+QSFSLIY    RSLDLICKDK +A+ WF  LRA+IS  +R +
Sbjct: 77  TGQRTVNFQRQLQPDKEHQSFSLIYAKGERSLDLICKDKAQADSWFIGLRAVISRCHRSR 136

Query: 129 SRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLG-KAFSE 187
             +   S  S +S    NSP+       +L   +       + +   SP   L  K FS+
Sbjct: 137 PLTALRSHRSAQSCV--NSPAGYFRRKHNLGILEDDKEFSQVRSLCGSPTPSLSEKCFSD 194

Query: 188 VLSFTAAAKAYTRAESVSKSLNFV--------------ASGGLDDANSRSSTADSFRISL 233
               + ++ ++  +ES  +  N V                 G D A S+     SFR  +
Sbjct: 195 --GLSLSSDSFCLSESSLQMHNAVDILVPNSPCVGPILEKCGSDYACSKFQKDMSFRF-V 251

Query: 234 SSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLEST 293
           + A   +  G      D L DV +WGEG+  G +GG V  +   S  + DAL+PK+LEST
Sbjct: 252 TPAYGCTQIGK----NDSLKDVLMWGEGVEGGNIGGMVQRLGNQSVMQVDALVPKLLEST 307

Query: 294 VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMV 353
            +LD +SI+ G KHA L+TK+G++F WG+GS GKLGH V  DV  PK++++L+  +I  V
Sbjct: 308 AMLDVRSISLGRKHAALITKRGEVFCWGDGSRGKLGHKVNMDVGMPKVVESLDDVHIKSV 367

Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
            CGE+ TCA+T SG+LYTWGD  +   L  ++   S W+P K+ G ++G+ IS + CG W
Sbjct: 368 VCGEYQTCALTHSGELYTWGDNKNGANLTDEMRTRSQWLPYKLFGPLDGITISKVACGEW 427

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           HTA ++ +G+LFT+GDGTFG LGHG   S S P+EV +L+ L     +CG WHTAAIV++
Sbjct: 428 HTAIVSLSGQLFTYGDGTFGVLGHGSLQSVSHPKEVASLRGLSVKSVACGSWHTAAIVDI 487

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
                  N +  K LFTWGDG +G+LGH D E ++VP CV    D  F +V+CG  +T+A
Sbjct: 488 IADRFKFNAVGGK-LFTWGDGDKGRLGHSDMEKKLVPTCVAKLVDYDFIRVSCGRMLTVA 546

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
           LT TG+V++MGS+ +GQLG+P +  K  T +EG +K  ++++I+ GSYH+AV++S   VY
Sbjct: 547 LTNTGKVYTMGSSVHGQLGNPQAKDKSITIVEGKLKEEFVKEISSGSYHVAVLTSGGNVY 606

Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICS 653
           TWGKG NGQLG G+ E++ +PT VEALRD++V+S+ CGSN TAAICLHK +S+ D S CS
Sbjct: 607 TWGKGGNGQLGLGNIEDRNSPTYVEALRDREVESIACGSNLTAAICLHKSISVTDQSSCS 666

Query: 654 GCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSES 713
           GCR  F   R++HNCYNCGL++C  CSSKK +  +LAP  +KP RVCD C   L   + S
Sbjct: 667 GCRMPFGLTRKKHNCYNCGLLFCHSCSSKKVINASLAPNKSKPSRVCDSCLNHLQKVTLS 726

Query: 714 GSNSQIPRNSSG--LFQNCKRVTEKENMNSRSATDGQSKPKGKSYHA-SPSLNGKFQWEP 770
           G  S+   + S   L  N     EKE     +     ++   +SY+  SP    K Q + 
Sbjct: 727 GRMSKPGTHGSKQLLCPNKVLANEKEGKGEATPPGSHTRSVSQSYNQDSPVSQRKTQKDQ 786

Query: 771 NSDFIKSNKISASPPGSRRVSRAPSPISRKS--SPACSITMNSFTDLANSEVIFEYSKQT 828
                    +S+   G  R  +   P+  +S  S    + + S +  +N+ +I +   ++
Sbjct: 787 GEHQHHVETVSSLSAGLPRWGQVSCPVVFESYYSKNSFLPVESKSTDSNAILIDDGMLES 846

Query: 829 NDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSL 888
           N   +     L AQ+ +L  + +  + +++     ++ T  +A+EEA K KAA E+I++L
Sbjct: 847 NMMLS-SVQRLEAQVRNLEMQCEIRDQKIQECRETIERTWSLAREEAAKRKAANEIIKAL 905

Query: 889 TAQARPGS 896
           T++ R  S
Sbjct: 906 TSRLRAMS 913


>gi|297800804|ref|XP_002868286.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297314122|gb|EFH44545.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1867

 Score =  657 bits (1695), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/903 (41%), Positives = 518/903 (57%), Gaps = 112/903 (12%)

Query: 1    MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ 60
            MA     +  +RD +QA+  LKKGT LLKY R+G+PKF  FRLS                
Sbjct: 866  MADHSSYVNHDRDIDQALVSLKKGTQLLKYSRKGRPKFRSFRLSP--------------- 910

Query: 61   LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALR 118
                           AVF+RY +PEK+Y SFSLIY N  RSLDLICKDK E E+WF  L+
Sbjct: 911  ---------------AVFRRYLRPEKDYLSFSLIYHNGDRSLDLICKDKAETEIWFAGLK 955

Query: 119  ALISEDNRCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQ 178
            +LI + NR K     I             PS  +SI     N   G T  I +  +NSP 
Sbjct: 956  SLIRQ-NRNKHAKSEIPEIHDSDCFSTGRPS-TASIDFAPNNTRRGRTS-IDLGIQNSPT 1012

Query: 179  NRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVS 238
                        F ++   Y R                   N    + D FRIS+SS  S
Sbjct: 1013 K-----------FGSSDVGYERG------------------NMLRPSTDGFRISVSSTPS 1043

Query: 239  SSSQGSCHEDFDGLGDVFIWGEGLGNGL-LGGAVNGVEISSADRRDALLPKVLESTVVLD 297
             S+  S  +D + LGDV++WGE   +G+   G VN                    TV +D
Sbjct: 1044 CSTGTSGPDDIESLGDVYVWGEVCSDGISQDGTVNC------------------RTVKID 1085

Query: 298  AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
               IACG +H  LVT+QG++F+WGE +GG+LGHG++ DVS PKL++ L  +NI  VACGE
Sbjct: 1086 ---IACGVRHIALVTRQGEVFTWGEEAGGRLGHGIQVDVSRPKLVEFLALTNIDFVACGE 1142

Query: 358  FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
            +HTCAV+ SGDL+TWGDGIHN+GLLG  S++SHWIP++VSG +EGLQ+ S+ CG WH+A 
Sbjct: 1143 YHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSAL 1202

Query: 418  ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
             T+ GKLFTFGDG FG LGHGDR S S P+EV+ L  LKT+  +CGVWHT AIVEV  +T
Sbjct: 1203 ATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTMKVACGVWHTVAIVEVMNQT 1262

Query: 478  SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
              S  +SSKKLFTWGDG + +LGHG+ E  ++P CV    D +F ++ACGH++T+ALT +
Sbjct: 1263 GTS--MSSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFQQIACGHTLTVALTTS 1320

Query: 538  GQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
            G VF+MG   +GQLGS  S GK P  ++  +   ++E+I+CG +H+AV++S+SEV+TWGK
Sbjct: 1321 GHVFTMGGTSHGQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGK 1380

Query: 598  GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRN 657
            G+NG+LGHGD E+++TPTLVEAL+++ VKS+ C                AD S+CSGCR 
Sbjct: 1381 GSNGRLGHGDKEDRKTPTLVEALKERHVKSISC----------------ADQSVCSGCRQ 1424

Query: 658  QFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNS 717
             F F R+RHNCYNCGLV+C  CSSKK++K ALAP   KP+RVCD C+ KL    ESG NS
Sbjct: 1425 AFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYTKLK-AGESGYNS 1483

Query: 718  QIP-RNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIK 776
             +  RNS+    +     +++  +S+     +++P   S   S               ++
Sbjct: 1484 NVANRNSTTRSLDGSVRPDRDIRSSKILLSPKTEPVKYSEVRSSRSESSIVRASQVPALQ 1543

Query: 777  SNKISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLAN------SEVIFEYSKQTND 830
              +  A P     +  A  P +  S+   S  + S    +       S  + +  K++N 
Sbjct: 1544 QLRDVAFPSSLSAIQNALKPAASTSTSTLSSGIRSSRRSSPPRSSGFSRSMIDTLKKSNG 1603

Query: 831  NFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTA 890
              N+E   L++Q+++L  K      E++R  +  +E + +A + + K+KAA EV++S+  
Sbjct: 1604 VINKEMTRLQSQIKNLKEKCDNQGTEIQRLKKTAREASDLAVKHSSKHKAATEVMKSVAE 1663

Query: 891  QAR 893
              R
Sbjct: 1664 HLR 1666


>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
          Length = 994

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/698 (47%), Positives = 468/698 (67%), Gaps = 23/698 (3%)

Query: 216 LDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVE 275
           + + ++R +++D  R S+SSA S+SS GS  +D D LGDV++WGE      +    + + 
Sbjct: 75  VTNMHTRGASSDVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVFCENSVRVGSDTI- 133

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           I S ++ D LLPK LES +VLD   + CG +HA LVT+ G +F+WGE SGG+LGHG   D
Sbjct: 134 IRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTRED 193

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRK 395
             +P+L+++L   N+  VACGEFHTCAVT +G+LYTWGDG HN+GLLG  ++  HWIP++
Sbjct: 194 SVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKR 253

Query: 396 VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
           +SG ++GL ++ + CG WHTA ITS G+LFTFGDG+FG LGHG+ +S S P+EVE+L  L
Sbjct: 254 ISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGL 313

Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
           KT+  +CGVWHTAAIVEV   T  S+ +S+ KLFTWGDG + +LGHGD E R+ P CV  
Sbjct: 314 KTIAVACGVWHTAAIVEVI-VTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVAS 372

Query: 516 SDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIED 575
             D  F +VACGHS+T+ LT +G+V SMG++ YGQLG+P S G+ P  +E  I   ++  
Sbjct: 373 LIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQ 432

Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           +ACGSYH+AV++ +SEV+TWGKGANG+LGHGD E+++ PT VEAL+D+ V+ + CG+NFT
Sbjct: 433 VACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFT 492

Query: 636 AAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINK 695
           AAICLHK VS AD S CS C+  F F R+RHNCYNCGLV+C  C+S+K+++ ALAP   K
Sbjct: 493 AAICLHKWVSGADQSQCSSCQQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGK 552

Query: 696 PYRVCDDCFIKLNTTSESGS-------NSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQ 748
           PYRVCD CF+KL   S+S S        S +   S+G  +  K +    NM+   + D +
Sbjct: 553 PYRVCDSCFLKLKNASDSDSFNKRKDIVSHLAGESNGDTKASKTILS-SNMDIIRSLDSK 611

Query: 749 SKPKGK-----SYHASPSLNGKFQWEP-----NSDFIKS--NKISASPPGSRRVSRAPSP 796
           +  +GK     S+  +P ++   Q        ++D  +S    +  S   S   SRA SP
Sbjct: 612 AARQGKKTDALSFLRTPQVSSLLQLRDIALSGSADMNRSVPRAVRTSAVRSVTTSRAVSP 671

Query: 797 ISRKSSPACSITMNSFTD-LANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEV 855
            SRKSSP  S T    T  L+ S+   +   +TN+  NQE D L AQ+++L  + +  EV
Sbjct: 672 FSRKSSPPRSTTPVPTTHGLSFSKSATDNLAKTNELLNQEIDRLHAQVDNLRHRCEHQEV 731

Query: 856 ELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
           EL ++++K++E   +  EE+ K+KAA+EVI+SLTAQ +
Sbjct: 732 ELHKSAKKVQEAMTLVAEESAKSKAAKEVIKSLTAQLK 769


>gi|242089177|ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
 gi|241945706|gb|EES18851.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
          Length = 916

 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/700 (48%), Positives = 466/700 (66%), Gaps = 35/700 (5%)

Query: 221 SRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSAD 280
           ++  ++D  R S+SSA S+SS GS  ++ D LGDV++WGE + +  +    + V ISS  
Sbjct: 3   AKGPSSDVLRASISSAPSTSSHGSAQDECDSLGDVYVWGEVVCDTSVRTGSDTV-ISSTG 61

Query: 281 RRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPK 340
           R D LLPK LES +VLD   + CG KHA LV K G++F+WGE SGG+LGHG   D   P+
Sbjct: 62  RTDILLPKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPR 121

Query: 341 LIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM 400
           L+++L  SN+  VACGEFHTCAVT +G+LY+WGDG HN+GLLG  +++ HWIP++VSG +
Sbjct: 122 LVESLTVSNVDFVACGEFHTCAVTTTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGAL 181

Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
           EGLQ++ + CG WHTA ITS G+LFTFGDG+FG LGHGD  S S PREVE+L  LKT+  
Sbjct: 182 EGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAV 241

Query: 461 SCGVWHTAAIVEV-AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           +CGVWHTAAIVEV   ++S S  LS+ KLFTWGDG + +LGHGD E R+ P CV    D 
Sbjct: 242 ACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDH 301

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
            F +VACGHS+T+ALT +GQV SMG+A YGQLG+P S G+ P  +E  I    +  IACG
Sbjct: 302 DFYRVACGHSLTVALTTSGQVLSMGNAVYGQLGNPHSDGRIPCLVEDKIVGEQVIQIACG 361

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
           SYH+AV++ ++EV+TWGKGANG+LGHGD E+++ PTLVE L+D+ V+ + CG+NFTAAIC
Sbjct: 362 SYHVAVLTGRNEVFTWGKGANGRLGHGDIEDRKVPTLVEVLKDRAVRYIACGANFTAAIC 421

Query: 640 LHKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRV 699
            +K VS AD S CS CR  F F R+R NCYNCGLV+C  C+S+K+++ ALAP   KPYRV
Sbjct: 422 QYKWVSGADQSQCSSCRQPFGFTRKRRNCYNCGLVHCNACTSRKALRAALAPSPGKPYRV 481

Query: 700 CDDCFIKLNTTSESG---------------SNSQIPRNSSGLFQNCKRVTEKENMNSRSA 744
           CD CF+KLN  S+                 SN       + L  N   +    N++ ++A
Sbjct: 482 CDSCFLKLNNASDPNAANRRKDPVPYQPVESNGDAKVGKASLPSNMDMI---RNLDIKAA 538

Query: 745 TDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNKI--SASPPGSRRV--------SRAP 794
             G+ K  G S+  +P ++   Q    SD   S  +  + S P + R+        SRA 
Sbjct: 539 RQGK-KTDGLSFLRNPQVSSLLQL---SDIALSGGLGMNRSAPRAVRISAARSVTTSRAV 594

Query: 795 SPISRKSSPACSIT-MNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFL 853
           SP SRK SP  S T + +   L+ S+   +   + ++  NQE + LRAQ+++L  + +  
Sbjct: 595 SPFSRKPSPPRSTTPVPTAHGLSLSKSATDNIVKAHELLNQEVERLRAQVDNLRNRCELQ 654

Query: 854 EVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
           E+EL+++++K++E   +  EE+ K+KAA+EVI+SLTAQ +
Sbjct: 655 ELELQKSAKKVQEAMTLVAEESAKSKAAKEVIKSLTAQLK 694


>gi|2244793|emb|CAB10216.1| disease resistance N like protein [Arabidopsis thaliana]
 gi|7268142|emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana]
          Length = 1996

 Score =  654 bits (1687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/898 (41%), Positives = 522/898 (58%), Gaps = 119/898 (13%)

Query: 11   ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
            +RD +QA+  LKKGT LLKY R+G+PKF  FRLS                          
Sbjct: 997  DRDIDQALVSLKKGTQLLKYSRKGRPKFRSFRLSP------------------------- 1031

Query: 71   PGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCK 128
                 AVF+RY +PEK+Y SFSLIY N  RSLDLICKDK E E+WF  L++LI ++    
Sbjct: 1032 -----AVFRRYLRPEKDYLSFSLIYHNGDRSLDLICKDKAETEVWFAGLKSLIRQN---- 1082

Query: 129  SRSDSISSDSPRSHTQK----NSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKA 184
             R+    S+ P  H         PS  +SI     N   G T  I +  +NSP       
Sbjct: 1083 -RNKQAKSEIPEIHDSDCFSTGRPS-TASIDFAPNNTRRGRTS-IDLGIQNSPTK----- 1134

Query: 185  FSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGS 244
                  F ++   Y R                   N    + D FRIS+SS  S S+  S
Sbjct: 1135 ------FGSSDVGYER------------------GNMLRPSTDGFRISVSSTPSCSTGTS 1170

Query: 245  CHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACG 304
              +D + LGDV++WGE   +G+   + +GV              V  +TV +D   IACG
Sbjct: 1171 GPDDIESLGDVYVWGEVWSDGI---SPDGV--------------VNSTTVKID---IACG 1210

Query: 305  SKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVT 364
             +H  LVT+QG++F+W E +GG+LGHG++ DV  PKL++ L  +NI  VACGE+HTCAV+
Sbjct: 1211 VRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGEYHTCAVS 1270

Query: 365  LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
             SGDL+TWGDGIHN+GLLG  S++SHWIP++VSG +EGLQ+ S+ CG WH+A  T+ GKL
Sbjct: 1271 TSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSALATANGKL 1330

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
            FTFGDG FG LGHGDR S S P+EV+ L  LKT+  +CGVWHT AIVEV  +T  S   S
Sbjct: 1331 FTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGTST--S 1388

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S+KLFTWGDG + +LGHG+ E  ++P CV    D +F ++ACGH+ T+ALT +G VF+MG
Sbjct: 1389 SRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGHVFTMG 1448

Query: 545  SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
               +GQLGS  S GK P  ++  +   ++E+I+CG +H+AV++S+SEV+TWGKG+NG+LG
Sbjct: 1449 GTSHGQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLG 1508

Query: 605  HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRR 664
            HGD ++++TPTLVEALR++ VKS+ CG               AD S+CSGCR  F F R+
Sbjct: 1509 HGDKDDRKTPTLVEALRERHVKSISCG---------------ADQSVCSGCRQAFGFTRK 1553

Query: 665  RHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIP-RNS 723
            RHNCYNCGLV+C  CSSKK++K ALAP   KP+RVCD C+ KL    ESG NS +  RNS
Sbjct: 1554 RHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYTKLK-AGESGYNSNVANRNS 1612

Query: 724  SGLFQNCKRV--TEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNKIS 781
            +   ++       +++  +SR     +++P   S   S               ++  +  
Sbjct: 1613 TTPTRSLDGTGRPDRDIRSSRILLSPKTEPVKYSEVRSSRSESSIVRASQVPALQQLRDV 1672

Query: 782  ASPPGSRRVSRAPSPISRKSS---PACSITMNSFTDLAN---SEVIFEYSKQTNDNFNQE 835
            A P     +  A  P++  S+   P+ + +    +   +   S  + +  K++N   N+E
Sbjct: 1673 AFPSSLSAIQNAFKPVASSSTSTLPSGTRSSRISSPPRSSGFSRGMIDTLKKSNGVINKE 1732

Query: 836  PDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
               L++Q+++L  K      E++R  +  +E + +A + + K+KAA EV++S+    R
Sbjct: 1733 MTKLQSQIKNLKEKCDNQGTEIQRLKKTAREASDLAVKHSSKHKAATEVMKSVAEHLR 1790


>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
          Length = 841

 Score =  653 bits (1685), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/694 (48%), Positives = 465/694 (67%), Gaps = 23/694 (3%)

Query: 220 NSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSA 279
           ++R +++D  R S+SSA S+SS GS  +D D LGDV++WGE      +    + + I S 
Sbjct: 2   HTRGASSDVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVFCENSVRVGSDTI-IRST 60

Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
           ++ D LLPK LES +VLD   + CG +HA LVT+ G +F+WGE SGG+LGHG   D  +P
Sbjct: 61  EKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHP 120

Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ 399
           +L+++L   N+  VACGEFHTCAVT +G+LYTWGDG HN+GLLG  ++  HWIP+++SG 
Sbjct: 121 RLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGA 180

Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
           ++GL ++ + CG WHTA ITS G+LFTFGDG+FG LGHG+ +S S P+EVE+L  LKT+ 
Sbjct: 181 LDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIA 240

Query: 460 ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
            +CGVWHTAAIVEV   T  S+ +S+ KLFTWGDG + +LGHGD E R+ P CV    D 
Sbjct: 241 VACGVWHTAAIVEVI-VTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY 299

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
            F +VACGHS+T+ LT +G+V SMG++ YGQLG+P S G+ P  +E  I   ++  +ACG
Sbjct: 300 DFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQVACG 359

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
           SYH+AV++ +SEV+TWGKGANG+LGHGD E+++ PT VEAL+D+ V+ + CG+NFTAAIC
Sbjct: 360 SYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAIC 419

Query: 640 LHKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRV 699
           LHK VS AD S CS C+  F F R+RHNCYNCGLV+C  C+S+K+++ ALAP   KPYRV
Sbjct: 420 LHKWVSGADQSQCSSCQQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGKPYRV 479

Query: 700 CDDCFIKLNTTSESGS-------NSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPK 752
           CD CF+KL    +S S        S +   S+G  +  K +    NM+   + D ++  +
Sbjct: 480 CDSCFLKLKNALDSDSFNKRKDIVSHLAGESNGDTKASKTILS-SNMDIIRSLDSKAARQ 538

Query: 753 GK-----SYHASPSLNGKFQWEP-----NSDFIKS--NKISASPPGSRRVSRAPSPISRK 800
           GK     S+  +P ++   Q        ++D  +S    +  S   S   SRA SP SRK
Sbjct: 539 GKKTDALSFLRTPQVSSLLQLRDIALSGSADMNRSVPRAVRTSAVRSVTTSRAVSPFSRK 598

Query: 801 SSPACSITMNSFTD-LANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELER 859
           SSP  S T    T  L+ S+   +   +TN+  NQE D L AQ+++L  + +  EVEL +
Sbjct: 599 SSPPRSTTPVPTTHGLSFSKSATDNLAKTNELLNQEIDRLHAQVDNLRHRCEHQEVELHK 658

Query: 860 TSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
           +++K++E   +  EE+ K+KAA+EVI+SLTAQ +
Sbjct: 659 SAKKVQEAMTLVAEESAKSKAAKEVIKSLTAQLK 692


>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
           Group]
          Length = 917

 Score =  652 bits (1682), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/694 (48%), Positives = 465/694 (67%), Gaps = 23/694 (3%)

Query: 220 NSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSA 279
           ++R +++D  R S+SSA S+SS GS  +D D LGDV++WGE      +    + + I S 
Sbjct: 2   HTRGASSDVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVFCENSVRVGSDTI-IRST 60

Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
           ++ D LLPK LES +VLD   + CG +HA LVT+ G +F+WGE SGG+LGHG   D  +P
Sbjct: 61  EKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHP 120

Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ 399
           +L+++L   N+  VACGEFHTCAVT +G+LYTWGDG HN+GLLG  ++  HWIP+++SG 
Sbjct: 121 RLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGA 180

Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
           ++GL ++ + CG WHTA ITS G+LFTFGDG+FG LGHG+ +S S P+EVE+L  LKT+ 
Sbjct: 181 LDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIA 240

Query: 460 ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
            +CGVWHTAAIVEV   T  S+ +S+ KLFTWGDG + +LGHGD E R+ P CV    D 
Sbjct: 241 VACGVWHTAAIVEVI-VTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY 299

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
            F +VACGHS+T+ LT +G+V SMG++ YGQLG+P S G+ P  +E  I   ++  +ACG
Sbjct: 300 DFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQVACG 359

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
           SYH+AV++ +SEV+TWGKGANG+LGHGD E+++ PT VEAL+D+ V+ + CG+NFTAAIC
Sbjct: 360 SYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAIC 419

Query: 640 LHKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRV 699
           LHK VS AD S CS C+  F F R+RHNCYNCGLV+C  C+S+K+++ ALAP   KPYRV
Sbjct: 420 LHKWVSGADQSQCSSCQQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGKPYRV 479

Query: 700 CDDCFIKLNTTSESGS-------NSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPK 752
           CD CF+KL    +S S        S +   S+G  +  K +    NM+   + D ++  +
Sbjct: 480 CDSCFLKLKNALDSDSFNKRKDIVSHLAGESNGDTKASKTIL-SSNMDIIRSLDSKAARQ 538

Query: 753 GK-----SYHASPSLNGKFQWEP-----NSDFIKS--NKISASPPGSRRVSRAPSPISRK 800
           GK     S+  +P ++   Q        ++D  +S    +  S   S   SRA SP SRK
Sbjct: 539 GKKTDALSFLRTPQVSSLLQLRDIALSGSADMNRSVPRAVRTSAVRSVTTSRAVSPFSRK 598

Query: 801 SSPACSITMNSFTD-LANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELER 859
           SSP  S T    T  L+ S+   +   +TN+  NQE D L AQ+++L  + +  EVEL +
Sbjct: 599 SSPPRSTTPVPTTHGLSFSKSATDNLAKTNELLNQEIDRLHAQVDNLRHRCEHQEVELHK 658

Query: 860 TSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
           +++K++E   +  EE+ K+KAA+EVI+SLTAQ +
Sbjct: 659 SAKKVQEAMTLVAEESAKSKAAKEVIKSLTAQLK 692


>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
 gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
          Length = 863

 Score =  652 bits (1682), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/734 (47%), Positives = 483/734 (65%), Gaps = 34/734 (4%)

Query: 173 YENSPQNRLGKAFSEVLSFTAAA-KAYTRAESVSKSLNFVASGG-LDDANSRSSTADSFR 230
           Y + P+N +GK F     +T  + K  + A S + +    + GG L DA+  ++T+ S  
Sbjct: 9   YGSPPRNGVGKTFPSGALYTVDSFKGRSAAHSAANAEGLRSRGGALIDASVWTATSMSSA 68

Query: 231 ISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGV--EISSADRRDALLPK 288
           +S SS  S   +G      D  G++++WGEG+G+G       GV  ++ ++ R DA LP+
Sbjct: 69  VSSSSQGSGQEEG------DVFGELWMWGEGIGDG-------GVTKKLDTSFRTDAFLPR 115

Query: 289 VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            + S VVLD Q IACG +H  LVT+QG++FSWGE SGG+LGHGV+ADV++P+LID+L  S
Sbjct: 116 AVRSLVVLDVQQIACGVRHTALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDSLASS 175

Query: 349 NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSI 408
            +  VACGE+H+CAVT SGDLYTWGDG HN GLLG  + ISHW P++V G +EG+++SS+
Sbjct: 176 TVQYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNSISHWTPKRVGGPLEGVRVSSV 235

Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTA 468
            CGPWHT  +TS G+LF+FGDGTFG LGHGDR S S+PREVE+LK LKT+ A+CG WHTA
Sbjct: 236 ACGPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHTA 295

Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH 528
           A+VEV  + S +    S KLFTWGDG + +LGHGD E ++VP CV    D +F +VACGH
Sbjct: 296 AVVEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGH 355

Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
           S+T+ALT TG +++MGS  YGQLG P +TG+ P  +   +    IE+++CG+YH+A ++S
Sbjct: 356 SLTVALTTTGHLYTMGSVSYGQLGDPQATGRLPGVLR--LGRTLIEEVSCGAYHVAALTS 413

Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHK---GVS 645
           K +V TWGKGANG+LGHGD E++  PTLVEALRDKQVK V CGS+FT+AICLHK   GV 
Sbjct: 414 KGDVCTWGKGANGRLGHGDAEDRDVPTLVEALRDKQVKKVSCGSSFTSAICLHKSGPGVG 473

Query: 646 IADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFI 705
             + S+CSGCR  F F R++HNCYNCGL YC  CSSKK++  + AP   K +RVCD CF+
Sbjct: 474 TGN-SMCSGCRQPFGFTRKKHNCYNCGLPYCHSCSSKKALYASQAPNPRKLHRVCDTCFL 532

Query: 706 KLNTTSESGSNSQIPRNSSGLFQNCKRVTEKENMNSRS--ATDGQSKPKGKSYHASPSLN 763
           K++ +S S +  +   NS   F    +V  K ++  ++   T  +SK    +   SP  N
Sbjct: 533 KMSRSSVSVTAPK--ENSETRFL---KVQTKGDLFKQTDVKTTKRSKRPDSTSRVSPMPN 587

Query: 764 GKFQW---EPNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSIT-MNSFTDLANSE 819
           G  QW      + F      + S P SR  SRA SP+SR+ SP  S T + +   L + +
Sbjct: 588 GLLQWGGVNAPAAFNAFLDAAKSIPQSRVGSRAVSPLSRRPSPPRSATPIPTVGGLTSPK 647

Query: 820 VIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNK 879
              E  K  N++   E   L+AQ+E LTR+ +  E EL  +S+++++   +A  E+ K K
Sbjct: 648 HEVEGVKLKNESLILEISRLKAQVEKLTRRCESHEKELLHSSKQIQDAFAVAGAESAKCK 707

Query: 880 AAQEVIRSLTAQAR 893
           AA+EVI SLTAQ +
Sbjct: 708 AAKEVIMSLTAQLK 721


>gi|218189796|gb|EEC72223.1| hypothetical protein OsI_05329 [Oryza sativa Indica Group]
 gi|222619928|gb|EEE56060.1| hypothetical protein OsJ_04872 [Oryza sativa Japonica Group]
          Length = 910

 Score =  651 bits (1680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 336/693 (48%), Positives = 468/693 (67%), Gaps = 25/693 (3%)

Query: 220 NSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSA 279
           +++ +++D  R+S SSA S+SS GS  +D D  GDV++WGE + +  +    + V + S 
Sbjct: 2   HTKGASSDVIRVSTSSAPSTSSHGSAQDDCDSSGDVYVWGEVICDNSVRTGSDTV-VRST 60

Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
            R D L PK LES +VLDA  + CG KH+ LVTK G++F+WGE SGG+LGHG   D  +P
Sbjct: 61  VRTDVLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSIHP 120

Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ 399
           +LI++L   N+ +VACGEFHTCAVT +G+LYTWGDG HN+GLLG   ++SHWIP++++G 
Sbjct: 121 RLIESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGA 180

Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
           +EGL ++ + CG WHTA IT+ G+LFTFGDGTFG LGHG+R S S P+EVE+L  LKT+ 
Sbjct: 181 LEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSGLKTIS 240

Query: 460 ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
            +CGVWHTAAIVEV   T  S+ +SS KLFTWGDG + +LGHGD EPR+ P CV    D 
Sbjct: 241 VACGVWHTAAIVEVI-VTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY 299

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
            F ++ACGHS+T+ LT +G+V SMG+  YGQLG+P S GK P  +E  +    ++ +ACG
Sbjct: 300 DFHRIACGHSLTVGLTTSGKVLSMGNTVYGQLGNPRSDGKIPCLVEEIVGENVVQ-VACG 358

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
           SYH+AV++ KSEV+TWGKGANG+LGHGD E+++ PTLVEALRD+ V+ + CG+NFTAAIC
Sbjct: 359 SYHVAVLTIKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSVRHIACGANFTAAIC 418

Query: 640 LHKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRV 699
            HK VS A+ S C+ CR  F F R+RHNC+NCGLV+C  C+S+K+++ ALAP   KPYRV
Sbjct: 419 QHKWVSGAEQSQCASCRQPFGFTRKRHNCHNCGLVHCNACTSRKAVRAALAPNPAKPYRV 478

Query: 700 CDDCFIKLNTTSESGSNSQIPRNSSGLFQNCKRVTEK---ENMNSRSATDGQSKPKGK-- 754
           CD CF+KLN   +S + S+   N      +  R+T+     N++   + D ++  +GK  
Sbjct: 479 CDSCFLKLNNAVDSSAISKKKENVLRESNSDGRLTKAIIPSNLDMIRSLDSKAAKQGKKT 538

Query: 755 ---SYHASPSLNGKFQWEPNSDFIKSNKISASPPGSRRV----------SRAPSPISRKS 801
              S+  +P +N   Q     D   S  +  + P  R V          SRA SP SRK 
Sbjct: 539 DALSFLRTPQMNSLLQLR---DIALSGGLDLNRPVPRAVRTTAVRSVNTSRAVSPFSRKP 595

Query: 802 SPACSITMNSFTD-LANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERT 860
           SP  S T    T  L+  +   +   +TN+  NQE + LRAQ+++L  + +  E+EL+++
Sbjct: 596 SPPRSTTPVPTTHGLSIGKGAADNLAKTNEMLNQEVERLRAQVDNLRHRCEVQELELQKS 655

Query: 861 SRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
           ++K++E   +  EE+ K+KAA+EVI+SLTAQ +
Sbjct: 656 AKKVQEAMTLVAEESSKSKAAKEVIKSLTAQLK 688


>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 907

 Score =  651 bits (1680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/681 (49%), Positives = 456/681 (66%), Gaps = 17/681 (2%)

Query: 227 DSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALL 286
           D  R S+SSA S+SS GS  +D D LGDV++WGE + +     + + V I S  + D LL
Sbjct: 9   DVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVVCDNSARTSSDTV-IRSTGKTDFLL 67

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           PK LES +VLD   + CG +HA LVT+ G++F+WGE SGG+LGHG   D  +P+L+++L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
            SNI  VACGEFHTCAVT +G+LYTWGDG HN+GLLG  +++ HWIPR++SG +EGLQI+
Sbjct: 128 ASNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIA 187

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            + CG WHTA ITS G+LFTFGDG+FG LGHG+  S S PREVE+L  LKT+  +CGVWH
Sbjct: 188 YVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIAVACGVWH 247

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           TAAIVEV   T  S  +S+ KLFTWGDG + +LGHGD E R+ P CV    D  F +VAC
Sbjct: 248 TAAIVEVI-VTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVAC 306

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
           GHS+T+ LT +G+V++MG++ YGQLG+P S G+ P  +E  I   ++  IACGSYH+AV+
Sbjct: 307 GHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGR-PCLVEDKIASEHVLQIACGSYHVAVL 365

Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSI 646
           +S+SEV+TWGKGANG+LGHGD E+++ PT VEALRD+ V+ + CG+NFTAAICLHK VS 
Sbjct: 366 TSRSEVFTWGKGANGRLGHGDVEDRKVPTTVEALRDRAVRHIACGANFTAAICLHKWVSG 425

Query: 647 ADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIK 706
           AD S CS CR  F F R+RHNCYNCGLV+C  C+S+K+++ ALAP   K +RVCD C+ K
Sbjct: 426 ADQSQCSSCRQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGKLHRVCDSCYSK 485

Query: 707 LNTTSESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGK-----SYHASPS 761
           L   S S S   +    S       +     NM+   + D ++  +GK     S+  +P 
Sbjct: 486 LKNASSSASKKDLASGESNGEARVGKSNLSSNMDMIRSLDSKAAKQGKKTDALSFLRNPQ 545

Query: 762 LNGKFQ-----WEPNSDFIKSNKISA-SPPGSRRV--SRAPSPISRKSSPACSITMNSFT 813
           ++   Q     +   +D  +S    A   P  R V  SRA SP SRKSSP  S T    T
Sbjct: 546 VSSLLQLRDIAFSGGADLNRSAAPRAVRTPAVRSVATSRAVSPFSRKSSPPRSTTPVPTT 605

Query: 814 D-LANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQ 872
             L+ S+   +   + N+  +QE + LRAQ++ L  +    E+EL ++++K++E   +  
Sbjct: 606 HGLSFSKSATDNLVKANELLSQEVERLRAQVDSLRNRCDHHELELHKSAKKVQEAMTLVA 665

Query: 873 EEAEKNKAAQEVIRSLTAQAR 893
           EE+ K+KAA+EVI+SLTAQ +
Sbjct: 666 EESAKSKAAKEVIKSLTAQLK 686


>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
          Length = 907

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/685 (49%), Positives = 460/685 (67%), Gaps = 25/685 (3%)

Query: 227 DSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALL 286
           D  R S+SSA S+SS GS  +D D LGDV++WGE + +     + + V I S  + D LL
Sbjct: 9   DVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVVCDNSARTSSDTV-IRSTGKTDFLL 67

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           PK LES +VLD   + CG +HA LVT+ G++F+WGE SGG+LGHG   D  +P+L+++L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
             NI  VACGEFHTCAVT +G+LYTWGDG HN+GLLG  +++ HWIPR++SG +EGLQI+
Sbjct: 128 ACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIA 187

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            + CG WHTA ITS G+LFTFGDG+FG LGHGD  S S PREVE+L  LKT+  +CGVWH
Sbjct: 188 YVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWH 247

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           TAAIVEV   T  S  +S+ KLFTWGDG + +LGHGD E R+ P CV    D  F +VAC
Sbjct: 248 TAAIVEVI-VTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVAC 306

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
           GHS+T+ LT +G+V++MG++ YGQLG+  S G+ P  +E  I   ++  IACGSYH+AV+
Sbjct: 307 GHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGR-PCLVEDKIASEHVLQIACGSYHVAVL 365

Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSI 646
           +S+SEV+TWGKGANG+LGHGD E+++ PT VEALRD+ V+ + CG+NFTAAICLHK VS 
Sbjct: 366 TSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFTAAICLHKWVSG 425

Query: 647 ADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIK 706
           AD S CS CR  F F R+RHNCYNCGLV+C  C+S+K+++ ALAP   K +RVCD C+ K
Sbjct: 426 ADQSQCSSCRQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPSPGKLHRVCDSCYSK 485

Query: 707 LNTTSESGSNSQI-PRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGK-----SYHASP 760
           L   S S +   + P  S+G  +  K +    NM+   + D ++  +GK     S+  +P
Sbjct: 486 LKNASSSANKKDLAPGESNGEARVGKSILS-SNMDMIRSLDSKAAKQGKKTDALSFLRNP 544

Query: 761 SLNGKFQW---------EPNSDFIKSNKISASPPGSRRV--SRAPSPISRKSSPACSITM 809
            ++   Q          +PN   +     +A  P +R V  SRA SP SR+SSP  S T 
Sbjct: 545 QVSSLLQLRDIAFSGGADPNRPAVPR---AARTPAARSVTSSRAVSPFSRRSSPPRSTTP 601

Query: 810 NSFTD-LANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETT 868
              T  L+ S+   +   + N+  +QE + LRAQ++ L  +    E+EL ++++K++E  
Sbjct: 602 VPTTHGLSLSKSATDNLVKANELLSQEVERLRAQVDSLRNRCDHHELELHKSAKKVQEAM 661

Query: 869 QIAQEEAEKNKAAQEVIRSLTAQAR 893
            +  EE+ K+KAA+EVI+SLTAQ +
Sbjct: 662 TLVAEESAKSKAAKEVIKSLTAQLK 686


>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
          Length = 907

 Score =  647 bits (1669), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/685 (49%), Positives = 460/685 (67%), Gaps = 25/685 (3%)

Query: 227 DSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALL 286
           D  R S+SSA S+SS GS  +D D LGDV++WGE + +     + + V I S  + D LL
Sbjct: 9   DVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVVCDNSARTSSDTV-IRSTGKTDFLL 67

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           PK LES +VLD   + CG +HA LVT+ G++F+WGE SGG+LGHG   D  +P+L+++L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
             NI  VACGEFHTCAVT +G+LYTWGDG HN+GLLG  +++ HWIPR++SG +EGLQI+
Sbjct: 128 ACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIA 187

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            + CG WHTA ITS G+LFTFGDG+FG LGHGD  S S PREVE+L  LKT+  +CGVWH
Sbjct: 188 YVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWH 247

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           TAAIVEV   T  S  +S+ KLFTWGDG + +LGHGD E R+ P CV    D  F +VAC
Sbjct: 248 TAAIVEVI-VTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVAC 306

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
           GHS+T+ LT +G+V++MG++ YGQLG+  S G+ P  +E  I   ++  IACGSYH+AV+
Sbjct: 307 GHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGR-PCLVEDKIASEHVLQIACGSYHVAVL 365

Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSI 646
           +S+SEV+TWGKGANG+LGHGD E+++ PT VEALRD+ V+ + CG+NFTAAICLHK VS 
Sbjct: 366 TSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFTAAICLHKWVSG 425

Query: 647 ADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIK 706
           AD S CS CR  F F R+RHNCYNCGLV+C  C+S+K+++ ALAP   K +RVCD C+ K
Sbjct: 426 ADQSQCSSCRQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPSPGKLHRVCDSCYSK 485

Query: 707 LNTTSESGSNSQI-PRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGK-----SYHASP 760
           L   S S +   + P  S+G  +  K +    NM+   + D ++  +GK     S+  +P
Sbjct: 486 LKNASSSANKKDLAPGESNGEARVGKSILS-SNMDMIRSLDSKAAKQGKKTDALSFLRNP 544

Query: 761 SLNGKFQW---------EPNSDFIKSNKISASPPGSRRV--SRAPSPISRKSSPACSITM 809
            ++   Q          +PN   +     +A  P +R V  SRA SP SR+SSP  S T 
Sbjct: 545 QVSSLLQLRDIAFSGGADPNRPAVPR---AARTPAARSVTSSRAVSPFSRRSSPPRSTTP 601

Query: 810 NSFTD-LANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETT 868
              T  L+ S+   +   + N+  +QE + LRAQ++ L  +    E+EL ++++K++E  
Sbjct: 602 VPTTHGLSLSKSATDNLVKANELLSQEVERLRAQVDSLRNRCDHHELELHKSAKKVQEAM 661

Query: 869 QIAQEEAEKNKAAQEVIRSLTAQAR 893
            +  EE+ K+KAA+EVI+SLTAQ +
Sbjct: 662 TLVAEESAKSKAAKEVIKSLTAQLK 686


>gi|356539788|ref|XP_003538375.1| PREDICTED: uncharacterized protein LOC100794953 [Glycine max]
          Length = 1046

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/902 (41%), Positives = 538/902 (59%), Gaps = 54/902 (5%)

Query: 11  ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
           +R  EQA+  +KKG YLLK GRRGKPK CPFRLS DE+ LIWY+G++EK L+LS V++I+
Sbjct: 14  DRAIEQAIVSIKKGAYLLKCGRRGKPKLCPFRLSQDERNLIWYSGQQEKHLRLSVVTKIV 73

Query: 71  PGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCK 128
            GQ     QR  + EKE  SFSLI  N  RSLDLICKDK +A  WF AL+A+IS   RC+
Sbjct: 74  QGQEHIRSQRQNESEKECHSFSLICANGERSLDLICKDKAQAASWFVALKAVIS---RCQ 130

Query: 129 S-RSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLG-KAFS 186
             R+ S         +  +SP+ +     +L   D       + +   SP   L  + FS
Sbjct: 131 HPRAFSSLRSCKGVQSCVSSPAGILRRKKNLGLLDDTSQFTQVHSVCASPTMSLSERCFS 190

Query: 187 EVLS-----FTAAAKAYTRAESVSKSLNFVASGGLD------------DANSRSSTADSF 229
           + LS     F ++A   +    V+ S +  +S  +D            D   + + +DS+
Sbjct: 191 DGLSCTSDNFYSSASFLSSTHGVTDS-SVASSPYIDPDIHGNIESTRIDKEHKKNLSDSY 249

Query: 230 RISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKV 289
            +  ++     S        + L DV IWG G+G   L G VN   +       +L+PK+
Sbjct: 250 LMHFTTPHVGKS--------NVLKDVMIWGGGIG--CLVGIVNERFVHPGIY--SLVPKL 297

Query: 290 LESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN 349
           LEST +LD  +IA G KHA LVTKQG++F WG+G  G+LG  ++ D+S PK++D+LNG +
Sbjct: 298 LESTAMLDVHNIALGGKHAALVTKQGEVFCWGQGKWGRLGQKIDMDISSPKIVDSLNGLH 357

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
           +  VACGE+HTCA+T SG++YTWG+ +    LL +    S WIP+++ G ++G+ ISS+ 
Sbjct: 358 VKTVACGEYHTCALTDSGEVYTWGNDVCCADLLNEGRTRSQWIPQRLGGPLDGISISSVA 417

Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA 469
           CG WHTA ++S G+LFT+GDGTFG LGHGD  S S P+EVE+L  L+   A+CG WHTAA
Sbjct: 418 CGEWHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLNGLRVRSAACGSWHTAA 477

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHS 529
           IVEV       N  +S KLFTWGDG EG+LGH D   ++VP  V    D  F +V+CG  
Sbjct: 478 IVEVMFDRFRYNS-ASGKLFTWGDGDEGRLGHVDNGNKIVPTRVTQLVDYDFVQVSCGRM 536

Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
           +T+ALT  G+VF+MGSA YGQLG+P +  K    +EG +K  +++ I+ GSYH+AV++S 
Sbjct: 537 LTVALTNMGKVFAMGSAKYGQLGNPHARDKVVI-VEGQLKQEFVKVISTGSYHVAVLTSA 595

Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADH 649
             VYTWG+G  GQLG GD E++ TP  VEALRD+QV ++ CG +FTAAICLHK +SI+D 
Sbjct: 596 GSVYTWGRGEIGQLGLGDTEDRYTPCFVEALRDRQVNTITCGPSFTAAICLHKPISISDQ 655

Query: 650 SICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNT 709
           S CSGCR  F F R++HNCYNCGL++C+ CSSKK     LAP  +K +RVCD CF K   
Sbjct: 656 STCSGCRLPFGFTRKKHNCYNCGLLFCRACSSKKITNAPLAPSKSKAFRVCDQCFDKRQG 715

Query: 710 TSESGSNSQIPR-NSSGLFQNCKRVTE-KENMNSRSATDGQSKPKGKSYHASPSLNGKFQ 767
            + S   S+    N+  + ++  ++++  E+    + T G     G+S +     +G+  
Sbjct: 716 GAHSVMASKSRNYNTQQVLKHQHKISDVTEDRGETTVTQGPMLSLGQSCYRKSMPSGRKD 775

Query: 768 WEPNSDFIKSNKISASPPGSR-RVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSK 826
           W+ + +  +  + S+S  G   +  + P P   +             +   + V+   + 
Sbjct: 776 WKNHQEIQQDVEDSSSMLGGMPQWGQVPCPAMFQ------------INCTENPVVHTDTT 823

Query: 827 QTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIR 886
           +++    +E   LRA+ + L  + +    +++   +K++E+  +A+EEA K KAA+EVI+
Sbjct: 824 KSDKVLLEEVHRLRAEAKRLEEQCELKNRKIQECRQKIEESWFVAREEAAKCKAAKEVIK 883

Query: 887 SL 888
           +L
Sbjct: 884 AL 885


>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
           distachyon]
          Length = 913

 Score =  644 bits (1662), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/693 (48%), Positives = 470/693 (67%), Gaps = 24/693 (3%)

Query: 221 SRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSAD 280
           ++  ++D  R S+SSA S+SS GS  +D D LGDV++WGE + +     + + V I S  
Sbjct: 3   TKGPSSDVLRASISSAPSTSSHGSAPDDCDSLGDVYVWGEVVCDNSARTSSDTV-IRSTG 61

Query: 281 RRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPK 340
           + D LLPK LES +VLD   + CG +HA LVT+ G++F+WGE SGG+LGHG   D  +P+
Sbjct: 62  KTDFLLPKPLESNLVLDVYHVDCGVRHASLVTRSGEVFTWGEDSGGRLGHGTREDSVHPR 121

Query: 341 LIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM 400
           L+++L   NI  VACGEFHTCAVT +G+LYTWGDG HN+GLLG  +++ HWIPR++SG +
Sbjct: 122 LVESLAACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGAL 181

Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
           EGLQ++ + CG WHTA ITS G+LFTFGDG+FG LGHG+  S S PREVE+L  LKT+  
Sbjct: 182 EGLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNVKSISCPREVESLSGLKTIAV 241

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
           +CGVWHTAAIVEV   T  S  +S+ KLFTWGDG + +LGHGD E R+ P CV    D  
Sbjct: 242 ACGVWHTAAIVEVI-VTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNPTCVASLIDYD 300

Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS 580
           F +VACGHS+T+ LT +G+V++MG++ YGQLG+P S G+ P  +   I + ++  +ACGS
Sbjct: 301 FYRVACGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGR-PCLVGDKITNEHVLQVACGS 359

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           YH++V++S+SEV+TWGKGANG+LGHGD E+++ PTLVEAL+D+ V+ + CG+NFTAAICL
Sbjct: 360 YHVSVLTSRSEVFTWGKGANGRLGHGDIEDQKVPTLVEALKDRSVRHIACGANFTAAICL 419

Query: 641 HKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVC 700
           HK VS AD S CS CR  F F R+RHNCYNCGLV+C  C+S+K+++ ALAP   K +RVC
Sbjct: 420 HKWVSGADQSQCSSCRQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGKLHRVC 479

Query: 701 DDCFIKLNTTSESGSNSQ---IPRNSSGLFQNCKRVTEK---ENMNSRSATDGQSKPKGK 754
           D CF KL   S+S S ++   +  + SG      RV +     NM+   + D ++  +GK
Sbjct: 480 DSCFSKLKNASDSSSANKKKDLAPHLSGESNGEVRVGKSILPSNMDMIRSLDSKAAKQGK 539

Query: 755 -----SYHASPSLNGKFQWEPNSDFIKSNKISASPPGSRRV--------SRAPSPISRKS 801
                S+  +P ++   Q   +  F     ++ S P + R         SRA SP SRKS
Sbjct: 540 KTDALSFLRNPQVSSLMQLR-DIAFSGGIDLNRSVPRAVRTSAVRSVTSSRAVSPFSRKS 598

Query: 802 SPACSIT-MNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERT 860
           SP  S T + +   L+ S+   +   +TN+  NQE + LRAQ+++L  + +  E+EL ++
Sbjct: 599 SPPRSTTPIPTTHGLSFSKSATDNLVKTNEFLNQEVERLRAQVDNLRHRCEHHELELHKS 658

Query: 861 SRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
           ++K++E   +  EE+ ++KAA+EVI+SLTAQ +
Sbjct: 659 AKKVQEAMTLVAEESARSKAAKEVIKSLTAQLK 691


>gi|224079652|ref|XP_002305904.1| predicted protein [Populus trichocarpa]
 gi|222848868|gb|EEE86415.1| predicted protein [Populus trichocarpa]
          Length = 1078

 Score =  644 bits (1660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/910 (41%), Positives = 545/910 (59%), Gaps = 52/910 (5%)

Query: 8   ILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVS 67
           +  +R  EQA+  +KKG  LLK GRRGKPKFCPFRLS+DEK LIWY+G+EEKQL+LS V+
Sbjct: 9   VPFDRTVEQAILAMKKGAQLLKCGRRGKPKFCPFRLSTDEKYLIWYSGQEEKQLRLSLVT 68

Query: 68  RIIPGQRTAVFQRYPQPEKEYQSFSLIYRN----RSLDLICKDKDEAELWFTALRALISE 123
            I+PGQRT    R  QP+KE QSFSLIY N     SLDLICKD  +A+ WF  LRA+IS+
Sbjct: 69  TIVPGQRT----RQLQPDKENQSFSLIYTNGDHSSSLDLICKDNAQADSWFIGLRAVISK 124

Query: 124 DNRCKSRSDSISSDSPRSHTQKNSPSHVSSISSDL-TNKDSGDTQPILVAYENSPQNRLG 182
            +   SR      +   + +  NSP+       +L   +D  +   +   Y +  Q+   
Sbjct: 125 CHH--SRPFCALKNHRVAQSCVNSPAGFIRRKHNLGILEDDTELSQVHSLYGSPMQSISD 182

Query: 183 KAFSEVLSFTAAAKAYTRA-----ESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAV 237
           + FS+ LS ++ +  ++ A     ++V   L    +   +  N + + +D+        +
Sbjct: 183 RGFSDGLSLSSDSLCFSEASLPLLQTVEDFL-IPHTPNAEPQNIKKNGSDNGFAEFQKNM 241

Query: 238 SSSSQGSCH-----EDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLES 292
                GS H     E  D L DV IWGEG G G +G   N     S  + D+LLPK+LE 
Sbjct: 242 CHRIIGSNHRSQRTEKNDVLKDVLIWGEGAGGGNIGCVSNHFGYHSTLQVDSLLPKLLEP 301

Query: 293 TVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM 352
           TV+LD ++I+ G  HA L+TK+G++F WGEGS GKLGH V+ DVS P ++++L+G  +  
Sbjct: 302 TVMLDVRNISLGRNHAALITKRGEVFCWGEGSRGKLGHKVDMDVSSPTIVESLDGFLVKF 361

Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
           VACGE+ TCA+T SG+L+ WG+  +   L+ +    S W+PR++SG + G+ IS++ CG 
Sbjct: 362 VACGEYQTCALTDSGELFVWGENKYGGNLVCEERTGSQWLPRQISGPLAGVSISNVACGD 421

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           WHTAA++S+G+LFT+GDGTFG LGHG+  S S P+EVE+LK L     +CG WHTAAIV+
Sbjct: 422 WHTAAVSSSGQLFTYGDGTFGVLGHGNLQSVSHPKEVESLKGLWVKSVACGSWHTAAIVD 481

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
           V       NG+  K LFTWGDG +G+LGH D E ++ P CV    +  F +V+CG  +T+
Sbjct: 482 VIFDRFKFNGVGGK-LFTWGDGDKGRLGHADLEKKLQPTCVAQLVEHDFVQVSCGRMLTV 540

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
           ALT TG++++MGS+ +GQLG+P +  K    +EG +K  ++++I+ GSYH+A ++S   V
Sbjct: 541 ALTRTGKIYTMGSSVHGQLGNPQAKNKSIAIVEGKLKEEFVKEISSGSYHVAALTSGGSV 600

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSIC 652
           YTWGKG NGQLG G+ E++  PTLVEALRD+QV+S+ CGSN TAAICLHK +S++D S C
Sbjct: 601 YTWGKGTNGQLGLGNVEDRNVPTLVEALRDRQVQSIACGSNLTAAICLHKSISVSDQSAC 660

Query: 653 SGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSE 712
            GCR  F F R++HNCYNCGL++C+ CSSKK +  +LAP  +K  RVCD CF  L   + 
Sbjct: 661 KGCRMPFGFTRKKHNCYNCGLLFCRACSSKKLINASLAPNKSKLCRVCDSCFNSLQNITH 720

Query: 713 SGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYH--ASPSL-------- 762
            G  S+            K +++++ ++      G + P G      + PSL        
Sbjct: 721 PGGGSR------------KLLSQQKALSDEKEERGGATPPGHRLQLMSRPSLESQPGERK 768

Query: 763 NGKFQWEPNSDFIKSNKISASPPGSRRVSRAPSPIS---RKSSPACSITMNSFTDLANSE 819
             + Q E          ISA  P   +VS  P+      RK S      ++S +   N E
Sbjct: 769 TSRNQGEKQQHLETVPSISAGLPRWGQVS-CPAIFESCYRKDSVHPLEPISSSSSSLNLE 827

Query: 820 VIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNK 879
              E   ++N+   +E + LRAQ + L  + Q    +++   + +++T  +A+EEA K K
Sbjct: 828 ---EDKHESNNILVEEVERLRAQAKGLEMQCQTGSQKIQECQQTIEKTWLLAREEAAKRK 884

Query: 880 AAQEVIRSLT 889
           AA  +I++L 
Sbjct: 885 AANGIIKALV 894


>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
           protein, partial [Zea mays]
          Length = 688

 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/690 (48%), Positives = 456/690 (66%), Gaps = 35/690 (5%)

Query: 222 RSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADR 281
           +  ++D  R S+SSA S+SS GS  ++ D LGDV++WGE + +  +    + V ISS  R
Sbjct: 4   KGPSSDVLRASISSAPSTSSHGSAQDECDSLGDVYVWGEVVCDTSVRTGSDTV-ISSTGR 62

Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL 341
            D LLPK LES +VLD   + CG KHA LV K G++F+WGE SGG+LGHG   D   P+L
Sbjct: 63  IDILLPKPLESNLVLDVYHVDCGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRL 122

Query: 342 IDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQME 401
           +++L  SN+  VACGEFHTCAVT +G+LYTWGDG +N+GLLG  +++ HWIP+++SG +E
Sbjct: 123 VESLTVSNVDFVACGEFHTCAVTTTGELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALE 182

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           GLQ++ + CG WHTA ITS G+LFTFGDG+FG LGHGD  S S PREVE+L  LKT+  +
Sbjct: 183 GLQVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSVSYPREVESLSGLKTIAVA 242

Query: 462 CGVWHTAAIVEV-AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
           CGVWHTAAIVEV   ++S S  LS+ KLFTWGDG + +LGHGD E R+ P CV    D  
Sbjct: 243 CGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDHD 302

Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS 580
           F +VACGHS+T+ALT +GQV SMG+A YGQLG+P S G+ P  +E  I    +  IACGS
Sbjct: 303 FYRVACGHSLTVALTTSGQVLSMGNAVYGQLGNPHSDGRIPCLVEDKIVGEQVLQIACGS 362

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           YH+AV++++SEV+TWGKGANG+LGHGD E+++ PTLVEAL+D+ V+ + CG+NFTAAIC 
Sbjct: 363 YHVAVLTNRSEVFTWGKGANGRLGHGDTEDRKVPTLVEALKDRAVRYIACGANFTAAICQ 422

Query: 641 HKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVC 700
           +K VS AD S CS CR  F F R+R NCYNCGLV+C  C+S+K+++ +LAP   KPYRVC
Sbjct: 423 YKWVSGADQSQCSSCRQPFGFTRKRRNCYNCGLVHCNSCTSRKALRASLAPSPGKPYRVC 482

Query: 701 DDCFIKLNTTSESG---------------SNSQIPRNSSGLFQNCKRVTEKENMNSRSAT 745
           D CF+KLN  S+                 SN       + L  N + +    N++ ++A 
Sbjct: 483 DSCFLKLNNASDPNAANRRKDPVPYQPVESNGDAKVGKASLPSNMEMI---RNLDIKAAW 539

Query: 746 DGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNKISASPPGSRRV----------SRAPS 795
            G+ K  G S+  +P ++   Q    SD   S  +  +    R V          SRA S
Sbjct: 540 QGK-KTDGLSFLRNPQVSSLLQL---SDIALSGGLGMNRSAPRAVHISAARSVTTSRAVS 595

Query: 796 PISRKSSPACSIT-MNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLE 854
           P SRK SP  S T + +   L+ S+   +   + N+  NQE + LRAQ+++L  + +  E
Sbjct: 596 PFSRKPSPPRSTTPVPTAHGLSFSKSATDNIVKANELLNQEVERLRAQVDNLRNRCELQE 655

Query: 855 VELERTSRKLKETTQIAQEEAEKNKAAQEV 884
           +EL+++++K+ E   +  EE+ K+KAA+EV
Sbjct: 656 LELQKSAKKVLEAMTLVAEESAKSKAAKEV 685


>gi|302817810|ref|XP_002990580.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
 gi|300141748|gb|EFJ08457.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
          Length = 863

 Score =  639 bits (1649), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 350/732 (47%), Positives = 483/732 (65%), Gaps = 30/732 (4%)

Query: 173 YENSPQNRLGKAF-SEVLSFTAAAKAYTRAESVSKSLNFVASGG-LDDANSRSSTADSFR 230
           Y + P+N +GK F S  L    ++K  + A S + + +  + GG L DA+  ++T+ S  
Sbjct: 9   YGSPPRNGVGKTFPSGALYTVDSSKGRSAAHSAANAESLRSRGGALIDASVWTATSMSSA 68

Query: 231 ISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVL 290
           +S SS  S   +G      D  G++++WGEG+G+          ++ ++ R DA LP+ +
Sbjct: 69  VSSSSQGSGQEEG------DVFGELWMWGEGIGD-----GGGTKKLDTSFRTDAFLPRAV 117

Query: 291 ESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNI 350
            S VVLD Q IACG +HA LVT+QG++FSWGE SGG+LGHGV+ADV++P+LID+L  S +
Sbjct: 118 RSLVVLDVQQIACGVRHAALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDSLASSTV 177

Query: 351 HMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC 410
             VACGE+H+CAVT SGDLYTWGDG HN GLLG  + ISHW P++V G +EG+++SS+ C
Sbjct: 178 QYVACGEYHSCAVTQSGDLYTWGDGTHNFGLLGHGNNISHWTPKRVGGPLEGVRVSSVAC 237

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
           GPWHT  +TS G+LF+FGDGTFG LGHGDR S S+PREVE+LK LKT+ A+CG WHTAA+
Sbjct: 238 GPWHTVLVTSTGQLFSFGDGTFGVLGHGDRKSASMPREVESLKGLKTLRAACGPWHTAAV 297

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
           VEV  + S +    S KLFTWGDG + +LGHGD E ++VP CV    D +F +VACGHS+
Sbjct: 298 VEVMSRYSNAGSSLSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAALVDHNFRQVACGHSL 357

Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           T+ALT TG +++MGS  YGQLG P +TG+ P  +   +    IE+++CG+YH+A ++SK 
Sbjct: 358 TVALTTTGHLYTMGSVSYGQLGDPQATGRLPGVLR--LGRTLIEEVSCGAYHVAALTSKG 415

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHK---GVSIA 647
           +V TWGKGANG+LGHGD E++  P+LVEALRDKQVK V CGS+FT+AICLHK   GV   
Sbjct: 416 DVCTWGKGANGRLGHGDAEDRDVPSLVEALRDKQVKKVSCGSSFTSAICLHKSGPGVGTG 475

Query: 648 DHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKL 707
           + S+CSGCR  F F R++HNCYNCGL YC  CSSKK++  + AP   K +RVCD CF+K+
Sbjct: 476 N-SMCSGCRQPFGFTRKKHNCYNCGLPYCHSCSSKKALYASQAPNPRKLHRVCDTCFLKM 534

Query: 708 NTTSESGSNSQIPRNSSGLFQNCKRVTEKENMNSRS--ATDGQSKPKGKSYHASPSLNGK 765
           + +S S +  +   NS   F    +V  K ++  ++   T  +SK    +   SP  NG 
Sbjct: 535 SRSSVSVTAPK--ENSETRFL---KVQTKGDLFKQTDVKTTKRSKRPDSTSRVSPMPNGL 589

Query: 766 FQW---EPNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSIT-MNSFTDLANSEVI 821
            QW      + F      + S P SR  SRA SP+SR+ SP  S T + +   L + +  
Sbjct: 590 LQWGGVNAPAAFNAFLDAAKSIPQSRVGSRAVSPLSRRPSPPRSATPIPTVGGLTSPKHE 649

Query: 822 FEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAA 881
            E  K  N++   E   L+AQ+E LTR+ +  E EL  +S+++++   +A  E+ K KAA
Sbjct: 650 VEEVKLKNESLILEISRLKAQVEKLTRRCESHEKELLHSSKQIQDAFAVAGAESAKCKAA 709

Query: 882 QEVIRSLTAQAR 893
           +EVI SLTAQ +
Sbjct: 710 KEVIMSLTAQLK 721


>gi|356569687|ref|XP_003553028.1| PREDICTED: uncharacterized protein LOC100797223 [Glycine max]
          Length = 1043

 Score =  639 bits (1648), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 376/905 (41%), Positives = 533/905 (58%), Gaps = 54/905 (5%)

Query: 8   ILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVS 67
           +  +R  EQA+  +KKG YLLK  RRGKPK CPFRLS DE+ LIWY+G++EK L+LS V+
Sbjct: 11  VPFDRAIEQAIVSIKKGAYLLKCRRRGKPKLCPFRLSQDERNLIWYSGQQEKHLRLSVVT 70

Query: 68  RIIPGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDN 125
           +I+ GQ     Q+  + EKE  SFSLIY N  RSLDLICKDK +A  WF  L+A+IS   
Sbjct: 71  KIVQGQEHIRSQKQNESEKECHSFSLIYANGERSLDLICKDKAQAASWFVGLKAVIS--- 127

Query: 126 RCKS-RSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLG-K 183
           RC+  R+ S         +  +SP+ +     +L   D       + +   SP   L  +
Sbjct: 128 RCQHPRAFSSLRSCKGVQSCASSPAGILRRKKNLGLLDDTSQFTQVHSVCASPTLSLSER 187

Query: 184 AFSEVLS-----FTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVS 238
            FS+ LS     F +++   +    V+   N V S    D ++ S+  +S RI      +
Sbjct: 188 CFSDGLSCTSDNFYSSSSFLSNTHGVTD--NSVPSSPYIDPDNHSNI-ESTRIDKEHKKN 244

Query: 239 SSSQGSCHEDFDGLG------DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLES 292
            S +   H     +G      DV IWG G+G   L G VN  E     R  +L+PK+LES
Sbjct: 245 LSYRYLMHSTSPHVGKNNVLKDVMIWGGGIG--CLVGIVN--ERFVQPRIYSLVPKLLES 300

Query: 293 TVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM 352
           T +LD  +IA G KHA L TKQG++F WG G  G+LG  ++ D+S PK++D+LNG ++  
Sbjct: 301 TAMLDVHNIALGGKHAALATKQGEVFCWGHGKWGRLGQKIDMDISSPKIVDSLNGLHVKN 360

Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
           VACGE+HTCA+T SG++YTWG+ +    LL +    S WIP+K+ G ++G+ ISS+ CG 
Sbjct: 361 VACGEYHTCALTDSGEVYTWGNDVCCADLLIEGRTRSQWIPQKLGGSLDGISISSVACGE 420

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           WHTA ++S G+LFT+GDGTFG LGHGD  S S P+EVE+L  L+   A+CG WHTAAIVE
Sbjct: 421 WHTAIVSSCGRLFTYGDGTFGVLGHGDLRSYSSPKEVESLSGLRVRSAACGSWHTAAIVE 480

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
           V       N  +S KLFTWGDG EG+LGH D   ++VP  V    D  F +V+CG  +T+
Sbjct: 481 VMFDRFRYNS-ASGKLFTWGDGDEGRLGHVDNGSKLVPTRVTQLVDYDFVQVSCGRMLTV 539

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
           ALT  G+VF+MGSA YGQLG+P +  K    +EG +K  +++ I+ GSYH+AV++S   V
Sbjct: 540 ALTNMGKVFAMGSAKYGQLGNPHARDK-AVMVEGQLKQEFVKVISTGSYHVAVLTSGGSV 598

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSIC 652
           YTWG+G NGQLG GD E++ TP  VEALRD+QV ++ CG +FTAAI LHK +SI+D S C
Sbjct: 599 YTWGRGENGQLGLGDTEDRYTPCFVEALRDRQVNTITCGPSFTAAISLHKPISISDQSTC 658

Query: 653 SGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLN-TTS 711
           +GCR  F F R++HNCY+CGL++C+ CSSKK     LAP  +K +RVCD CF K    T 
Sbjct: 659 TGCRLPFGFTRKKHNCYSCGLLFCRACSSKKITNAPLAPSKSKAFRVCDQCFDKRQGGTH 718

Query: 712 ESGSNSQIPRNSSGLFQNCKRVTE-KENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEP 770
              ++     NS  L ++  ++ +  E+    + T G     G+S +     +G+  W+ 
Sbjct: 719 PVMASKSRNHNSQQLLKHQHKIADVTEDRGETTVTQGPLLSLGQSCYRKSMPSGRKDWKS 778

Query: 771 NSDFIKSNKISASPP---GSRRVSRAPSP----ISRKSSPACSITMNSFTDLANSEVIFE 823
           N +      +  S P   G  +  + P P    I+   +P       + TD   S+ +  
Sbjct: 779 NQE--SQQDVEDSSPMLGGMPQWGQVPCPAIFKINSTENPV------AHTDATKSDKVLL 830

Query: 824 YSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQE 883
                     +E   LRA+ + L  + +    +++   +K++E+  +A+EEA K KAA+E
Sbjct: 831 ----------EEVHRLRAEAKRLEEQCELKNHKIQECQQKIEESWFVAREEAAKCKAAKE 880

Query: 884 VIRSL 888
           VI++L
Sbjct: 881 VIKAL 885


>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
          Length = 882

 Score =  638 bits (1645), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 334/682 (48%), Positives = 454/682 (66%), Gaps = 19/682 (2%)

Query: 227 DSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALL 286
           D  R S+SSA S+SS GS  +D D LGDV++WGE + +     + + V I S  + D LL
Sbjct: 9   DVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVVCDNSARTSSDTV-IRSTGKTDFLL 67

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           PK LES +VLD   + CG +HA LVT+ G++F+WGE SGG+LGHG   D  +P+L+++L 
Sbjct: 68  PKPLESNLVLDVYHVDCGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLA 127

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
             NI  VACGEFHTCAVT +G+LYTWGDG HN+GLLG  +++ HWIPR++SG +EGLQI+
Sbjct: 128 ACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIA 187

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            + CG WHTA ITS G+LFTFGDG+FG LGHGD  S S PREVE+L  LKT+  +CGVWH
Sbjct: 188 YVSCGTWHTALITSMGQLFTFGDGSFGVLGHGDLKSISCPREVESLSGLKTIAVACGVWH 247

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           TAAIVEV   T  S  +S+ KLFTWGDG + +LGHGD E R+ P CV    D  F +VAC
Sbjct: 248 TAAIVEVI-VTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDFYRVAC 306

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
           GHS+T+ LT +G+V++MG++ YGQLG+  S G+ P  +E  I   ++  IACGSYH+AV+
Sbjct: 307 GHSLTVGLTTSGKVWTMGNSVYGQLGNLNSDGR-PCLVEDKIASEHVLQIACGSYHVAVL 365

Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSI 646
           +S+SEV+TWGKGANG+LGHGD E+++ PT VEALRD+ V+ + CG+NFTAAICLHK VS 
Sbjct: 366 TSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFTAAICLHKWVSG 425

Query: 647 ADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIK 706
           AD S CS CR  F F R+RHNCYNCGLV+C  C+S+K+++ ALAP   K +RVCD C+ K
Sbjct: 426 ADQSQCSSCRQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPSPGKLHRVCDSCYSK 485

Query: 707 LNTTSESGSNSQI-PRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGK-----SYHASP 760
           L   S S +   + P  S+G  +  K +    NM+   + D ++  +GK     S+  +P
Sbjct: 486 LKNASSSANKKDLAPGESNGEARVGKSILS-SNMDMIRSLDSKAAKQGKKTDALSFLRNP 544

Query: 761 SLNGKFQ-----WEPNSDF---IKSNKISASPPGSRRVSRAPSPISRKSSPACSITMNSF 812
            ++   Q     +   +D                S   SRA SP SR+SSP  S T    
Sbjct: 545 QVSSLLQLRDIAFSGGADLNRPAAPRAARTPAARSVTSSRAVSPFSRRSSPPRSTTPVPT 604

Query: 813 TD-LANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIA 871
           T  L+ S+   +   + N+  +QE + LRAQ++ L  +    E+EL ++++K++E   + 
Sbjct: 605 THGLSLSKSATDNLVKANELLSQEVERLRAQVDSLRNRCDHHELELHKSAKKVQEAMTLV 664

Query: 872 QEEAEKNKAAQEVIRSLTAQAR 893
            EE+ K+KAA+EVI+SLTAQ +
Sbjct: 665 AEESAKSKAAKEVIKSLTAQLK 686


>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
           distachyon]
          Length = 913

 Score =  637 bits (1644), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 332/699 (47%), Positives = 460/699 (65%), Gaps = 24/699 (3%)

Query: 208 LNFVASGGLD--DANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNG 265
           +N + S G D  D  ++  ++D  R+S SSA S+SS GS  +D D  GDV++WGE +   
Sbjct: 3   INSIVSWGSDATDMPTKGVSSDVIRVSTSSAPSTSSHGSAQDDCDSSGDVYVWGEVICEN 62

Query: 266 LLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSG 325
            +    + V I S  R D LLPK LES +VLD   + CG KHA LVTK G++F+WGE SG
Sbjct: 63  SVRAGSDAV-IRSTVRHDVLLPKPLESKLVLDVYHVDCGVKHAALVTKNGEVFTWGEESG 121

Query: 326 GKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           G+LGHG   D  +P L+++L  SN+  VACGEFHTCAVT +G+LYTWGDG HN+GLLG  
Sbjct: 122 GRLGHGSREDYIHPSLVESLAVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNIGLLGHG 181

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
           +++SHWIP+++SG +EG Q++ + CG WHTA ITS G+LFTFGDGTFG LGHG+R S   
Sbjct: 182 TDLSHWIPKRISGALEGQQVAYVSCGTWHTALITSTGQLFTFGDGTFGVLGHGNRESIPC 241

Query: 446 PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE 505
           PREVE+L  LKT+  +CGVWHTAA+VEV   T  S+ +SS KLFTWGDG + +LGHGD E
Sbjct: 242 PREVESLSGLKTIAVACGVWHTAAVVEVI-VTQSSSSISSGKLFTWGDGDKHRLGHGDKE 300

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIE 565
           PRV P CV    D  F ++ACGHS+T+ LT +GQV+ MG+  YGQLG+P S GK P  +E
Sbjct: 301 PRVKPTCVASLIDYDFHRIACGHSLTVGLTTSGQVWGMGNTVYGQLGNPRSDGKLPCLVE 360

Query: 566 GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQV 625
            +I    +  +ACGSYH+AV++ KSEV+TWGKGANG+LGHGD E+++ PTLVE LRD+ V
Sbjct: 361 -DIMGENVVQVACGSYHVAVLTVKSEVFTWGKGANGRLGHGDIEDRKIPTLVEVLRDRGV 419

Query: 626 KSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSM 685
           + + CG+NFTAAIC  K +S A+ S C+ CR  F F R+RHNC+NCG V+C  C+S+K +
Sbjct: 420 RHIACGANFTAAICQRKWMSGAEQSQCASCRQPFGFTRKRHNCHNCGHVHCNACTSRKVL 479

Query: 686 KTALAPEINKPYRVCDDCFIKLNTTSESGSNSQ----IPRNSSGLFQNCK--RVTEKENM 739
           + ALAP   KPYRVCD CF+KLN   +S + ++    +PR+S     + K  +     N+
Sbjct: 480 RAALAPNPAKPYRVCDSCFLKLNNAIDSSAVNKRKEAVPRHSGESNTDAKLAKAIIPSNL 539

Query: 740 NSRSATDGQSKPKGK-----SYHASPSLNGKFQWEPNSDFIKSNKISASPPGSRRVSRAP 794
           +   + D ++  +GK     S+  +P +N   Q     D   S     + P  + V    
Sbjct: 540 DMIRSLDSKAAKQGKKTDALSFLRNPQMNSLLQLR---DIALSGGFDLNRPVQKTVR--- 593

Query: 795 SPISRKSSPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLE 854
           +P  R  SP  S T      +A S    +   + N+  NQE + LR Q+++L  + +  +
Sbjct: 594 TPAVRSPSPPRSTTPTHGLSIAKSAT--DNLTKKNEMLNQEVERLRGQVDNLRHRCELQD 651

Query: 855 VELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
           +EL+++++K++E   +  EE+ K+KAA+EVI+SLTAQ +
Sbjct: 652 LELQKSAKKVQEAMTLVAEESGKSKAAKEVIKSLTAQLK 690


>gi|357460713|ref|XP_003600638.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355489686|gb|AES70889.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 1032

 Score =  629 bits (1622), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 365/898 (40%), Positives = 529/898 (58%), Gaps = 45/898 (5%)

Query: 11  ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
           +R  EQA+  +KKG YLLK G RGKPK CPFRLS DE+ LIW +G++EK L+LS V++I+
Sbjct: 15  DRALEQAIVSIKKGAYLLKCGGRGKPKLCPFRLSPDERNLIWCSGQQEKHLRLSGVTKIV 74

Query: 71  PGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCK 128
            G+     QR  + EKE  SFSLIY N   SLDLICKDK +A  WF  L+A+IS   + K
Sbjct: 75  QGEGNIRSQRQNETEKECHSFSLIYANGEHSLDLICKDKAQAATWFVGLKAVISRCQQPK 134

Query: 129 SRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLG-KAFSE 187
           + S   S    +S    +SPS +     +L   D       + +   SP   L  + FS+
Sbjct: 135 AFSSLRSCKGVQSCV--SSPSGILRRKKNLGLLDDTSQFTQVHSVCASPTLSLSERCFSD 192

Query: 188 VLSFTAAAKAYTRAESVSKSL--NFVASGGLDDANSRSSTADS-----FRISLSSAVSSS 240
            LS+ +   +   + S    +  N V S    + +  S+   S     ++  LSS  S  
Sbjct: 193 GLSYKSEFYSSVSSLSSIHGMTDNSVPSSPYINPDIHSNIKTSRFEKEYKKELSSNRSIM 252

Query: 241 SQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQS 300
              S     + L DV +WG G+G   L G VN   + ++    +L+PK+LEST +LD Q+
Sbjct: 253 PPASALVGNNVLKDVMVWGGGIG--CLVGIVNERFVQNSIY--SLVPKLLESTAMLDVQN 308

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           +A G  HA +VTKQG+++ WG+G  G+LG  ++ D+S PK++D L+   +  VACGE+HT
Sbjct: 309 VALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDTLSDIRVKNVACGEYHT 368

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           CA+T SG++Y WG+ +    L+ +    S W+  K+S  +EG+ ISSI CG WHTA ++S
Sbjct: 369 CALTDSGEVYAWGNDVSCSDLVDEGRIRSQWLTHKLSLPVEGISISSIACGEWHTAIVSS 428

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            G+LFT+GDGTFG LGHG   S S P+EVE+LK L     +CG WHTAAI+E++ +    
Sbjct: 429 CGRLFTYGDGTFGVLGHGSYHSFSSPKEVESLKGLCVRSVACGTWHTAAIIEISAERFKY 488

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
           N  S+ KLFTWGD  EG+LGH D   ++VP CV    D  F +V+CG  +T+ALT  G+V
Sbjct: 489 N-TSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDYDFVQVSCGRMMTLALTNMGKV 547

Query: 541 FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
           F+MGSA YGQLG+P    +    +EG +K  Y++ I+CGSYH+AV++S   VYTWGKG N
Sbjct: 548 FAMGSAKYGQLGNPHVKDR-AVVVEGMLKQEYVKMISCGSYHVAVLTSSGSVYTWGKGEN 606

Query: 601 GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFN 660
           G+LG GD EN+ TP  VEALRD+QV ++ CG +FT AICLHK +SI+D S C+GCR  F 
Sbjct: 607 GELGLGDTENRYTPCFVEALRDRQVDTITCGPSFTVAICLHKPISISDQSSCNGCRLPFG 666

Query: 661 FRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSE-------- 712
           F R++HNCYNCGL++C+ CSSKK M  +LAP  +K +RVCD CF +   +SE        
Sbjct: 667 FTRKKHNCYNCGLLFCRSCSSKKVMNASLAPVKSKAFRVCDSCFNRKQGSSEHPAMDSSK 726

Query: 713 --SGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEP 770
             + +N QI R+   +  +   VT  E+    + T+G      ++ +     +G+  W+ 
Sbjct: 727 SRNYNNQQIQRHHQNMTGD---VT--EDRGETNVTNGPMLSLSQTCYRKNMPSGRKVWKS 781

Query: 771 NSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQTND 830
             D   S   S+      +  +   P S +    C+          NS V    + +++ 
Sbjct: 782 QQDLEDS---SSKLGNVIQCGQGQVPYSAQFRINCT---------ENSVVHETETTKSDK 829

Query: 831 NFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSL 888
              +E   LRA+ + L ++ +    E++   +K++E+  +A++EA K KAA+EVI++L
Sbjct: 830 LLMEEVQRLRAEAKRLEKQCELKNQEIQECQQKVEESWSVAKDEAAKCKAAKEVIKAL 887


>gi|28874834|emb|CAC84086.1| ZR1 protein [Medicago sativa]
          Length = 1035

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 370/908 (40%), Positives = 531/908 (58%), Gaps = 62/908 (6%)

Query: 11  ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
           +R  EQA+  +KKG YLLK G RGKPK CPFRLS DE+ L+W +GK+EK L+LS V++I+
Sbjct: 15  DRAVEQAIVSIKKGAYLLKCGNRGKPKLCPFRLSPDERNLVWCSGKQEKHLRLSGVTKIV 74

Query: 71  PGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNR-- 126
            G+     QR    EKE  S SLIY N    LDLICKDK +A  WF  L+A+IS   +  
Sbjct: 75  QGEGNIRSQRQNGTEKECHSSSLIYANGEHPLDLICKDKAQAATWFVGLKAVISRCQQPK 134

Query: 127 -------CKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQN 179
                  CK     +SS S     +KN    +   +S  T   S    P L   E     
Sbjct: 135 AFSSLRSCKGVQGCVSSPSGILRRKKNLG--LLDDASQFTQVHSVCASPTLSLSE----- 187

Query: 180 RLGKAFSEVLSFTAAAKAYTRAESVSKSL--NFVASGGLDDANSRSSTADS-----FRIS 232
              + FS+ LS+ +   +   + S    +  N V S    + +  S+   S     ++  
Sbjct: 188 ---RCFSDGLSYKSDFYSSASSLSSIHGITDNSVPSSPYINPDIHSNIKTSRFEKEYKKE 244

Query: 233 LSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLES 292
           LSS  S     S     + L DV IWG G+G   L G VN   + ++    +L+PK+LES
Sbjct: 245 LSSNRSIMPPASALVGNNVLKDVMIWGGGIG--CLVGIVNERFVQNSIY--SLVPKLLES 300

Query: 293 TVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM 352
           T +LD Q++A G  HA +VTKQG+++ WG+G  G+LG  ++ D+S PK++D+L+   +  
Sbjct: 301 TAMLDVQNVALGGNHAAIVTKQGEVYCWGQGKCGRLGQRIDMDISSPKIVDSLSDIRVKK 360

Query: 353 VACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCG 411
           VACGE+HTCA+T SGD+YTWG D   +L   G++   S W+  K S  +EG+ ISSI CG
Sbjct: 361 VACGEYHTCALTDSGDVYTWGKDSCSDLVDEGRIR--SQWLTHKFSLPVEGISISSIACG 418

Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIV 471
            WHTA ++S G+LFT+GDGTFG LGHG+  S S P+EVE+LK L     +CG WHTAAI+
Sbjct: 419 EWHTAIVSSCGRLFTYGDGTFGVLGHGNYHSFSSPKEVESLKGLCVRSVACGTWHTAAII 478

Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
           EV+ +    N  S+ KLFTWGD  EG+LGH D   ++VP CV    D  F +V+CG  +T
Sbjct: 479 EVSAERFKYN-TSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDYDFVQVSCGRMMT 537

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
           +ALT  G+VF+MGSA YGQLG+P    +    +EG +K  Y++ I+CGSYH+AV++S   
Sbjct: 538 LALTNMGKVFAMGSAKYGQLGNPHVKDR-AVVVEGMLKQEYVKMISCGSYHVAVLTSSGS 596

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSI 651
           VYTWGKG NG+LG GD EN+ TP  VEALRD+QV ++ CG +FT AICLHK +SI+D S 
Sbjct: 597 VYTWGKGENGELGLGDTENRYTPCFVEALRDRQVDTITCGPSFTVAICLHKPISISDQSS 656

Query: 652 CSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIK----- 706
           C+GCR  F F R++HNCYNCGL++C+ CSSKK +  +LAP  +K +RVC+ CF K     
Sbjct: 657 CNGCRLPFGFTRKKHNCYNCGLLFCRSCSSKKVLNASLAPVKSKAFRVCESCFNKKQGSS 716

Query: 707 -----LNTTSESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPS 761
                 ++ S + +N QI R+   +  +   VT  E+    + T+G      ++ +    
Sbjct: 717 ERSSMDSSKSRNCNNQQIQRHHQNMIGD---VT--EDRGETNVTNGPLLSLSQTCYRKNM 771

Query: 762 LNGKFQWEPNSDFIKSNKISASPPGSR-RVSRAPSPISRKSSPACSITMNSFTDLANSEV 820
            +G+  W+   +  +  + S+S  GS  +  +   P S +    C+          NS V
Sbjct: 772 PSGRKVWKIQHESQRDVEDSSSTLGSVIQCGQGQVPYSAQFRINCT---------ENSVV 822

Query: 821 IFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKA 880
               + +++    +E   LRA+ + L ++ +    E++   +K++E+  +A+EEA K KA
Sbjct: 823 HETETTKSDKLLIEEVQRLRAEAKRLEKQCELKNQEIQECQQKVEESWSVAKEEAAKCKA 882

Query: 881 AQEVIRSL 888
           A+EVI++L
Sbjct: 883 AKEVIKAL 890


>gi|15218867|ref|NP_176767.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|6227017|gb|AAF06053.1|AC009513_9 Contains PF|00169 Pleckstrin homology domain, 6 PF|00415 Regulator
           of chromosome condensation (RCC1) domains and a PF|01363
           FYVE Zinc finger domain [Arabidopsis thaliana]
 gi|332196320|gb|AEE34441.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1006

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 365/908 (40%), Positives = 536/908 (59%), Gaps = 68/908 (7%)

Query: 1   MASFQQNILVERD--TEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEE 58
           M   Q ++ V RD   EQA+  LKKG  LLK  RRG PKFCPF+LS DEK LIWY+G+EE
Sbjct: 1   MGEQQISVTVPRDRTDEQAILALKKGAQLLKCRRRGNPKFCPFKLSMDEKYLIWYSGEEE 60

Query: 59  KQLKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTA 116
           +QL+LS V  I+ GQ T  FQ+  Q +++ QSFSLIY N   +LDLICKDK +A+ WF  
Sbjct: 61  RQLRLSSVITIVRGQITPNFQKQAQSDRKEQSFSLIYANGEHTLDLICKDKAQADSWFKG 120

Query: 117 LRALISEDNRCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENS 176
           LRA+I++ +  ++  +  SS   +S    NSP+       +L   +       + +   S
Sbjct: 121 LRAVITKHHNIRNSVNHRSSRGAQSCI--NSPAGFMRRKQNLGLLEETPDVTQIRSLCGS 178

Query: 177 PQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTAD--------- 227
           P   L +     LS   +  + + AES   +L  V+S    D + R+S  D         
Sbjct: 179 PSTLLEE---RCLSNGLSCSSDSFAES--DALGPVSSYYETDYDFRNSDCDRSTGSELCR 233

Query: 228 --SFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDAL 285
             S R + S  +S  +Q     +   L D+ IWG          A+ G+   S ++ DAL
Sbjct: 234 FSSQRFAASPPLSIITQPVTRSNV--LKDIMIWG----------AITGLIDGSKNQNDAL 281

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
            PK+LES  + D QSI+ G+KHA LVT+QG++F WG G+ GKLG  V  D+ +PK +++L
Sbjct: 282 SPKLLESATMFDVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESL 341

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEG-L 403
               +  VAC +  TCAVT SG+LY WG DG    G + Q    S ++ RK+S  + G L
Sbjct: 342 EDVAVRSVACSDHQTCAVTESGELYLWGIDG----GTIEQSG--SQFLTRKISDVLGGSL 395

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
            + S+ CG WHTA +TS+G+LFT+G GTFG LGHG   S + P+EVE+L+ +K +  SCG
Sbjct: 396 TVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCG 455

Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
            WHTAAIVE A      N  S  KLFTWGDG +G+LGH D++ ++VP CV    D  F K
Sbjct: 456 PWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIK 515

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHI 583
           V+CG ++T+AL+ +G V++MGS+ +GQLG P +  K    + GN+  ++++DIA GS+H+
Sbjct: 516 VSCGWTLTVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHV 575

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
           AV++S   VYTWGKG NGQLG GD  ++ +P LVE L D+ V+S+ CG N TAAICLHK 
Sbjct: 576 AVLTSFGNVYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLNLTAAICLHKE 635

Query: 644 VSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDC 703
           +S+ D + CS C++ F F RR+HNCYNCGL++C  CSSKK++  +LAP  +K  RVCD C
Sbjct: 636 ISLNDQTACSSCKSAFGFTRRKHNCYNCGLLFCNACSSKKAVNASLAPNKSKLSRVCDSC 695

Query: 704 FIKLNTTSESGSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLN 763
           F  L + +E   N ++  ++  +    +RV+E +    +S  + Q+ P+     A+ S +
Sbjct: 696 FDHLWSITEFSRNVKMDNHTPRMQMVTRRVSE-DLTEKQSENEMQNLPQ-----ANRSSD 749

Query: 764 GKFQWEPNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFE 823
           G+ +W              S P   R  +    IS  SS   S++    +    S     
Sbjct: 750 GQPRWG-----------QVSGPSLFRFDK----ISTSSSLNLSVSARRTSSTKIST---- 790

Query: 824 YSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQE 883
            S ++N    +E + L+A +++L R+ +    ++E   ++L +T ++A+EEAEK+KAA+E
Sbjct: 791 -SSESNKILTEEIERLKAVIKNLQRQCELGNEKMEECQQELDKTWEVAKEEAEKSKAAKE 849

Query: 884 VIRSLTAQ 891
           +I++L ++
Sbjct: 850 IIKALASK 857


>gi|449475602|ref|XP_004154499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229506 [Cucumis sativus]
          Length = 1079

 Score =  613 bits (1580), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 307/607 (50%), Positives = 424/607 (69%), Gaps = 20/607 (3%)

Query: 306 KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTL 365
           +H+ +VT+QG++F+WGE +GG+LG G+  DV+ P+L++AL  + + +VACGEFHTCAVT+
Sbjct: 247 RHSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTCAVTM 306

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            G+LYTWGDG+HN GLLG  +++SHW+P+++SG +EGLQ++ + CGPWHTA I+S G+LF
Sbjct: 307 DGELYTWGDGVHNAGLLGNGTDVSHWMPKRISGILEGLQVAYVACGPWHTALISSTGQLF 366

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
           TFGDGTFG LGHGD+ S S PREV++L  L+T+  +CGVWHTAA+VEV   T  S  + S
Sbjct: 367 TFGDGTFGVLGHGDKXSISYPREVDSLTGLRTIAVACGVWHTAAVVEVI-MTQSSTSIPS 425

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
            KLFTWGDG + +LGHGD EPR+ P CV    D +F K+ACGHSITI LT +GQVF++GS
Sbjct: 426 GKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNFHKIACGHSITIGLTTSGQVFTVGS 485

Query: 546 ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           + YGQLG+P + GK P  +E  +     E++ACG+YH+ V++SK+EVYTWGKGANG+LGH
Sbjct: 486 SVYGQLGNPHADGKQPCLVEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLGH 545

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRR 665
           GD E++++PTLVE+L+DK VK + CGSN++AAICLHK +S  + S CS CR  F F R+R
Sbjct: 546 GDVEDRKSPTLVESLKDKHVKIIACGSNYSAAICLHKSLSGTEQSQCSACRQAFGFTRKR 605

Query: 666 HNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQ---IPR- 721
           HNCYNCGLV+C  CSSKK+++ ALAP   K YRVCD C+ KL+  SESGSN +   +PR 
Sbjct: 606 HNCYNCGLVHCHSCSSKKALRAALAPTPRKSYRVCDSCYAKLSKVSESGSNYRKNAVPRL 665

Query: 722 ---NSSGLFQNCKRV--TEKENMNSRSATDGQSKPKGK---------SYHASPSLNGKFQ 767
              N   L ++  R   T   NM+     D ++  +GK            A   L  K  
Sbjct: 666 SGENRDKLDKSDTRPPKTALSNMDLIKQLDSKAAKQGKRTDTFAVVRPTQAHSLLQLKDG 725

Query: 768 WEPNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSIT-MNSFTDLANSEVIFEYSK 826
             PN+  I+       P  +   SR+ SP+SR+SSP  S T + + + L+ S+ I +  K
Sbjct: 726 PIPNTVDIRRLAPKPIPMANGVNSRSVSPLSRRSSPPRSGTPVPTASGLSFSKGIADSLK 785

Query: 827 QTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIR 886
           +TN+  NQE  +LRAQ+E L ++ +  E+EL ++ +K +E   +A EE+ K+KAA+EVI 
Sbjct: 786 KTNELLNQEVLMLRAQVESLRKRCELQELELRKSEKKTEEAIAVAAEESAKSKAAKEVIT 845

Query: 887 SLTAQAR 893
           SLTAQ +
Sbjct: 846 SLTAQIK 852



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 147/297 (49%), Gaps = 41/297 (13%)

Query: 253 GDVFIWGEGLGN-GLLGGAVNGVEISSADRRDALLPKVLESTVV-LDAQSIACGSKHAVL 310
           G+++ WG+G+ N GLLG   NG ++S        +PK +   +  L    +ACG  H  L
Sbjct: 308 GELYTWGDGVHNAGLLG---NGTDVSH------WMPKRISGILEGLQVAYVACGPWHTAL 358

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVT------ 364
           ++  GQ+F++G+G+ G LGHG +  +SYP+ +D+L G     VACG +HT AV       
Sbjct: 359 ISSTGQLFTFGDGTFGVLGHGDKXSISYPREVDSLTGLRTIAVACGVWHTAAVVEVIMTQ 418

Query: 365 -----LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
                 SG L+TWGDG  N   LG   +     P  V   ++      I CG   T  +T
Sbjct: 419 SSTSIPSGKLFTWGDGDKN--RLGHGDKEPRLKPTCVPALID-YNFHKIACGHSITIGLT 475

Query: 420 SAGKLFTFGDGTFGALG--HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           ++G++FT G   +G LG  H D     +  E + L E    +A CG +H   +       
Sbjct: 476 TSGQVFTVGSSVYGQLGNPHADGKQPCLV-EDKLLGESAEEVA-CGAYHVMVLT------ 527

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                 S  +++TWG GA G+LGHGD E R  P  V+   D     +ACG + + A+
Sbjct: 528 ------SKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIACGSNYSAAI 578



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 56/88 (63%), Gaps = 1/88 (1%)

Query: 283 DALLPKVLESTVVLD-AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL 341
           D   P ++E  ++ + A+ +ACG+ H +++T + ++++WG+G+ G+LGHG   D   P L
Sbjct: 497 DGKQPCLVEDKLLGESAEEVACGAYHVMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTL 556

Query: 342 IDALNGSNIHMVACGEFHTCAVTLSGDL 369
           +++L   ++ ++ACG  ++ A+ L   L
Sbjct: 557 VESLKDKHVKIIACGSNYSAAICLHKSL 584


>gi|449469320|ref|XP_004152369.1| PREDICTED: uncharacterized protein LOC101216037 [Cucumis sativus]
          Length = 1088

 Score =  612 bits (1578), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 367/908 (40%), Positives = 537/908 (59%), Gaps = 38/908 (4%)

Query: 8   ILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVS 67
           IL +R  EQA+  +KKG YLLK  RRGKPKFCPFRLS DEK L+WY+G +EKQL+LS V 
Sbjct: 9   ILHDRAVEQAILSMKKGAYLLKSRRRGKPKFCPFRLSMDEKFLVWYSGNQEKQLRLSLVV 68

Query: 68  RIIPGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDN 125
           +IIPG+         Q  K+ +SFSLIY N  RSL L CKDK +A+ WF  L ++IS ++
Sbjct: 69  KIIPGKMLPSLVNQLQITKKLESFSLIYSNCERSLVLTCKDKAQADCWFLGLSSIISRNH 128

Query: 126 RCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLG-KA 184
               R  +I  D     +  NSP+       +L   +     P + +   SP   L  + 
Sbjct: 129 H--PRPVTILKDQRGIVSCANSPAGFIRRKYNLGLLEDSADFPQVRSLCGSPTLSLSERC 186

Query: 185 FSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSF--RISLSSAVSSSSQ 242
            S+ LS +  +   +  +S      +       D  +R S  ++   + +LS  V+    
Sbjct: 187 LSDGLSHSFDSFYPSDGQSEGDISAWGTPVAEPDVLNRGSLDETIYEKNALSRFVAPVHT 246

Query: 243 GSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIA 302
               E  + L DV IWGEG+  GL+GG             DALLPK+LEST++LD QSI+
Sbjct: 247 SPYIEKNNILKDVMIWGEGIEGGLIGGGTERSASHKGMLVDALLPKLLESTMMLDVQSIS 306

Query: 303 CGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCA 362
            G KHA L+TK G+IFSWG+G  G+LGH +  D+ +PKL+D+LNG     VACGE+ TCA
Sbjct: 307 LGGKHAALITKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLNGIAAKSVACGEYQTCA 366

Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
           +T +G++YTWGD         + +  S W+P+K+SG ++G+ IS++ CG WHTA +++ G
Sbjct: 367 LTKAGEVYTWGDSRFGADFDCEENSRSRWLPQKLSGPLKGISISNVACGEWHTAVVSACG 426

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA---GKTSG 479
           +LFT+GDGTFGALGHG+  S S P+EVE+L  L     +CG WHTAAIV++     K   
Sbjct: 427 RLFTYGDGTFGALGHGNLISLSQPKEVESLNGLCVKSVACGSWHTAAIVDIMIDRFKFKS 486

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
           + G    KLFTWGDG +G+LGHGD E +++P CV    D  F +V+CG  +T+ LT  G+
Sbjct: 487 AVG----KLFTWGDGDKGKLGHGDNERKLLPTCVAPLVDCDFAQVSCGRMLTVGLTNMGR 542

Query: 540 VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
           V++MGS+ +GQLG+  S       +EG +K  +++ I+ GSYH+A ++S   VYTWGKGA
Sbjct: 543 VYTMGSSIHGQLGNLSSRDASVAIVEGKLKEEFVKAISSGSYHVASLTSTGRVYTWGKGA 602

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQF 659
           +GQLG GD++++  PT VEAL DKQV+S+ CGSNFTAAICLH+ ++ +D S C GC+  F
Sbjct: 603 HGQLGLGDSDDRNLPTFVEALGDKQVESIACGSNFTAAICLHRSITSSDQSSCYGCKLPF 662

Query: 660 NFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCF--IKLNTTSESGSNS 717
            F R++HNCY+CGL +C++CSSKK+   ALAP  +K +RVCD CF  ++ +   +     
Sbjct: 663 GFTRKKHNCYHCGLYFCRMCSSKKTTNAALAPNKSKAFRVCDPCFNILRRHIHLDRSLKQ 722

Query: 718 QIPRNSSGLFQNCKRVTEKENMNSRSATDGQS---KPKGKSYHASPSLNGKF--QWEPNS 772
           +  R  + L Q  ++V+  E ++ RS +   S    P  ++     S + KF  Q E   
Sbjct: 723 ENTRTQNSLKQ--QKVSGFERVDKRSMSSKHSPLLSPTKQNIDEMQS-HWKFINQGENQQ 779

Query: 773 DF--IKSNKISA----SPPGSRRVSRAPSPISRKSSPACSITMNSFTDL--ANSEVI--- 821
           D     S+ I +    S P S ++    +  +  S      T N    L   NS  I   
Sbjct: 780 DLETFTSSGIPSWGQVSCPASFKMCDRENTKTLFSPSQNQTTANDLVHLKSPNSSAISLD 839

Query: 822 -FEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKA 880
            F Y   +++  ++E   LR ++++L  +    + ++++  +K++E   +A+EEA K KA
Sbjct: 840 RFLYG--SSEKLSEEVQRLRTEVKNLELQCNDGDEKMQKCRQKIEEAWSVAREEAAKCKA 897

Query: 881 AQEVIRSL 888
           A+E+I++L
Sbjct: 898 AKEIIKAL 905


>gi|297841169|ref|XP_002888466.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297334307|gb|EFH64725.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1005

 Score =  610 bits (1572), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 361/901 (40%), Positives = 526/901 (58%), Gaps = 77/901 (8%)

Query: 11  ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
           +R  EQA+  LKKG  LLK  RRG PKFCPF+LS DEK LIWY+G+EE+QL+LS V  I+
Sbjct: 13  DRTDEQAILALKKGAQLLKCRRRGNPKFCPFKLSMDEKYLIWYSGEEERQLRLSSVITIV 72

Query: 71  PGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCK 128
            GQ T  FQ+  Q +++ QSFSLIY N   +LDLICKDK +A+ WF  LRA+I++ +  +
Sbjct: 73  RGQITPNFQKQAQSDRKEQSFSLIYANGEHTLDLICKDKAQADSWFKGLRAVITKHHNIR 132

Query: 129 SRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEV 188
           + ++  +S   +S    NSP+       +L   +       + +   SP   L +     
Sbjct: 133 NSANLRTSRGAQSCI--NSPAGFMRRKQNLGLLEETPDLTQIRSLCGSPSTLLEE---RC 187

Query: 189 LSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTAD----------SFRISLSSAVS 238
           LS   +  + + AES   +L  V+S    D + R+S  +          S R + S   S
Sbjct: 188 LSNGLSCSSDSFAES--DALGPVSSYNGTDYDFRNSDCERTGTELCRFSSQRFAASPPPS 245

Query: 239 SSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDA 298
             +Q     +   L D+ IWG          A+ G+   S ++ DAL PK+LES  + D 
Sbjct: 246 IITQPITRSNV--LKDIMIWG----------AITGLIDGSKNQNDALSPKLLESATMFDV 293

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           QSI+ G+KHA LVT+QG++F WG G+ GKLG  V  D+ +PK +++L    +  VAC + 
Sbjct: 294 QSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACSDH 353

Query: 359 HTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEG-LQISSICCGPWHTA 416
            TCAVT SG+LY WG DG    G + Q    S ++ RK+S  + G L I S+ CG WHTA
Sbjct: 354 QTCAVTESGELYLWGIDG----GTIEQSG--SQFLTRKISDVLGGSLSIFSVACGAWHTA 407

Query: 417 AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
            +TS+G+LFT+G  TFG LGHG   S + P+EVE+L+ +K +  SCG WHTAAIVE A  
Sbjct: 408 MVTSSGQLFTYGSRTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIVETAID 467

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
               N  S  KLFTWGDG +G+LGH D + ++VP CV    D  F KV+CG ++T+AL+ 
Sbjct: 468 RKFYNAKSCGKLFTWGDGDKGRLGHADNKRKLVPTCVTELIDHDFIKVSCGWTLTVALSV 527

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           +G V++MGS+ +GQLG P +  K    + GN+  ++++DIA GS+H+AV++S   VYTWG
Sbjct: 528 SGTVYTMGSSIHGQLGCPRAKDKSINVVLGNLTRQFVKDIASGSHHVAVLTSFGNVYTWG 587

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCR 656
           KG NGQLG GD  ++ +P LVE L D+ V+S+ CG N TAAICLHK +S+ D + CS C+
Sbjct: 588 KGTNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLNLTAAICLHKEISLTDQTACSSCK 647

Query: 657 NQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSN 716
           + F F R++HNCYNCGL++C  CSSKK++  +LAP  +K  RVCD CF  L + +E   N
Sbjct: 648 SAFGFTRKKHNCYNCGLLFCNACSSKKAVNASLAPNKSKLSRVCDSCFDHLWSITEFSRN 707

Query: 717 SQIPRNSSGLFQNCKRV----TEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNS 772
            +   ++  +    +RV    TEKE  N       Q+ P+   +      +G+ +W   S
Sbjct: 708 VKTENHTPRMQLVTRRVSEDWTEKEAENQM-----QNVPQANRFS-----DGQPRWGQVS 757

Query: 773 --DFIKSNKISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQTND 830
                  +K S S P +  VS A  P S K S                      S ++N 
Sbjct: 758 VPSLFHFDKFSTSSPINLSVS-ARRPSSTKIST---------------------SSESNK 795

Query: 831 NFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTA 890
              +E + L+A++ +L ++ +    ++E   ++L +T ++A+EEAEK+KAA+E+I++L +
Sbjct: 796 ILIEEIERLKAEIRNLQKQCELGNEKMEECQQELDKTWEVAKEEAEKSKAAKEIIKALAS 855

Query: 891 Q 891
           +
Sbjct: 856 K 856


>gi|449523373|ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
           sativus]
          Length = 958

 Score =  609 bits (1570), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 327/747 (43%), Positives = 468/747 (62%), Gaps = 51/747 (6%)

Query: 183 KAFSEVLSFT---AAAKAYTRAESVSKSLNFVASG-GLDDANS--RSSTADSFRISLSSA 236
           + F   L F+   A  +      S    L+ V+S  G + AN   R+S  D FR S+SS 
Sbjct: 12  RPFGATLEFSNSLARGRDSIDLNSRESHLHLVSSDVGSERANMQLRTSGGDGFRSSVSST 71

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
            S SS GS  +D + LGDV++WGE   + +L    +G       + D L PK LE+ VVL
Sbjct: 72  PSCSSGGSGPDDIESLGDVYVWGEIWTDLVLP---DGTSSQIPVKNDVLTPKPLETNVVL 128

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG 356
           D Q IACG +H  LVT+QG++F+WGE  GG+LGHG++ D S P L++ L  S++  VACG
Sbjct: 129 DVQQIACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACG 188

Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
           E+HTCA+T S DLYTWGDGI N G+LG  ++ISHWIP++V G +EGLQ+ S+ CG WH+A
Sbjct: 189 EYHTCAITSSNDLYTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACGTWHSA 248

Query: 417 AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
             TS GKL+TFGDGT+G LGHGDR S   PREV+ L  L+T+  +CGVWHTAAIVEV  +
Sbjct: 249 LATSNGKLYTFGDGTYGVLGHGDRESVVYPREVQLLSGLRTIKVACGVWHTAAIVEVMSQ 308

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           T GSN +SS+KLFTWGDG + +LGHG+ E  ++P CV    D +F ++ACGH++T+ALT 
Sbjct: 309 T-GSN-MSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFHQLACGHNMTVALTT 366

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           +G VF+MG   YGQLG+P S G  P  ++  +   ++E+I+CG+YH  V++S++EV++WG
Sbjct: 367 SGHVFTMGGTAYGQLGNPSSDGVIPCLVQDRLVGEFVEEISCGAYHTVVLTSRNEVFSWG 426

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCR 656
           +G+NG+LGHGD E+++ PTL+EAL+D+ VKS+ CGSNFTA+IC+HK VS AD S+C+GCR
Sbjct: 427 RGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCGSNFTASICIHKWVSGADQSVCTGCR 486

Query: 657 NQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSN 716
             F F R+RHNCYNCGLV+C  CSSKK++K ALAP   KP+RVCD C+ KL  ++E+G+N
Sbjct: 487 QAFGFTRKRHNCYNCGLVHCHSCSSKKALKAALAPTPGKPHRVCDSCYAKLK-SAEAGNN 545

Query: 717 SQIPRNSSGLFQNCKRVTEKENMN------SRSATDGQSKP---------KGKSYHASPS 761
             + R    L  N +    KE  +      SR      ++P         +  S   SPS
Sbjct: 546 FCVNRK---LTANRRSTDYKERFDRGDVRPSRILLSPTTEPVKYHEIKSVRPGSRPTSPS 602

Query: 762 LNGKFQ---WEPNSDFIKSNKISA----------SPPGSRRV--SRAPSPISRKSSPACS 806
           +    Q    +   D    + +SA          +PP    +  SR  SP +R+ SP  S
Sbjct: 603 MVRASQVPSLQQLKDIAFPSSLSAIQNALRPALVAPPSPPPMGNSRPASPYARRPSPPRS 662

Query: 807 ITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKE 866
            T         S+ + +  K++N+   Q+   L+ ++++L +K      E++   +   E
Sbjct: 663 TTP------VFSKSVIDSLKKSNETLVQDKSKLQREVKNLKQKCDIQGAEIQNLQKNATE 716

Query: 867 TTQIAQEEAEKNKAAQEVIRSLTAQAR 893
              + +EE+ K K A++++ ++T Q +
Sbjct: 717 AASLVEEESSKCKIAKKLVTTITEQLK 743


>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
 gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
          Length = 685

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 313/644 (48%), Positives = 428/644 (66%), Gaps = 23/644 (3%)

Query: 220 NSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSA 279
           ++R +++D  R S+SSA S+SS GS  +D D LGDV++WGE      +    + + I S 
Sbjct: 2   HTRGASSDVLRASISSAPSTSSHGSAQDDCDSLGDVYVWGEVFCENSVRVGSDTI-IRST 60

Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
           ++ D LLPK LES +VLD   + CG +HA LVT+ G +F+WGE SGG+LGHG   D  +P
Sbjct: 61  EKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHP 120

Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ 399
           +L+++L   N+  VACGEFHTCAVT +G+LYTWGDG HN+GLLG  ++  HWIP+++SG 
Sbjct: 121 RLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGA 180

Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
           ++GL ++ + CG WHTA ITS G+LFTFGDG+FG LGHG+ +S S P+EVE+L  LKT+ 
Sbjct: 181 LDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLGHGNLTSISCPKEVESLSGLKTIA 240

Query: 460 ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
            +CGVWHTAAIVEV   T  S+ +S+ KLFTWGDG + +LGHGD E R+ P CV    D 
Sbjct: 241 VACGVWHTAAIVEVI-VTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDY 299

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
            F +VACGHS+T+ LT +G+V SMG++ YGQLG+P S G+ P  +E  I   ++  +ACG
Sbjct: 300 DFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSDGRLPCLVEDRIAGEHVLQVACG 359

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
           SYH+AV++ +SEV+TWGKGANG+LGHGD E+++ PT VEAL+D+ V+ + CG+NFTAAIC
Sbjct: 360 SYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTAAIC 419

Query: 640 LHKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRV 699
           LHK VS AD S CS C+  F F R+RHNCYNCGLV+C  C+S+K+++ ALAP   KPYRV
Sbjct: 420 LHKWVSGADQSQCSSCQQPFGFTRKRHNCYNCGLVHCNACTSRKALRAALAPNPGKPYRV 479

Query: 700 CDDCFIKLNTTSESGS-------NSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPK 752
           CD CF+KL    +S S        S +   S+G  +  K +    NM+   + D ++  +
Sbjct: 480 CDSCFLKLKNALDSDSFNKRKDIVSHLAGESNGDTKASKTILS-SNMDIIRSLDSKAARQ 538

Query: 753 GK-----SYHASPSLNGKFQWEP-----NSDFIKS--NKISASPPGSRRVSRAPSPISRK 800
           GK     S+  +P ++   Q        ++D  +S    +  S   S   SRA SP SRK
Sbjct: 539 GKKTDALSFLRTPQVSSLLQLRDIALSGSADMNRSVPRAVRTSAVRSVTTSRAVSPFSRK 598

Query: 801 SSPACSITMNSFTD-LANSEVIFEYSKQTNDNFNQEPDVLRAQL 843
           SSP  S T    T  L+ S+   +   +TN+  NQE D L AQ+
Sbjct: 599 SSPPRSTTPVPTTHGLSFSKSATDNLAKTNELLNQEIDRLHAQV 642


>gi|449484483|ref|XP_004156895.1| PREDICTED: uncharacterized protein LOC101227493 [Cucumis sativus]
          Length = 1077

 Score =  601 bits (1549), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 352/884 (39%), Positives = 525/884 (59%), Gaps = 39/884 (4%)

Query: 17  AVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPGQRTA 76
           A+  +KKG YLLK  RRGKPKFCPFRLS DEK L+WY+G +EKQL+LS V +IIPG+   
Sbjct: 38  AILSMKKGAYLLKSRRRGKPKFCPFRLSMDEKFLVWYSGNQEKQLRLSLVVKIIPGKMLP 97

Query: 77  VFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCKSRSDSI 134
                 Q  K+ +SFSLIY N  RSL L CKDK +A+ WF  L ++IS ++    R  +I
Sbjct: 98  SLVNQLQITKKLESFSLIYSNCERSLVLTCKDKAQADCWFLGLSSIISRNHH--PRPVTI 155

Query: 135 SSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLG-KAFSEVLSFTA 193
             D     +  NSP+       +L   +     P + +   SP   L  +  S+ LS + 
Sbjct: 156 LKDQRGIVSCANSPAGFIRRKYNLGLLEDSADFPQVRSLCGSPTLSLSERCLSDGLSHSF 215

Query: 194 AAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSF--RISLSSAVSSSSQGSCHEDFDG 251
            +   +  +S      +       D  +R S  ++   + +LS  V+        E  + 
Sbjct: 216 DSFYPSDGQSEGDISAWGTPVAEPDVLNRGSLDETIYEKNALSRFVAPVHTSPYIEKNNI 275

Query: 252 LGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           L DV IWGEG+  GL+GG             DALLPK+LEST++LD QSI+ G KHA L+
Sbjct: 276 LKDVMIWGEGIEGGLIGGGTERSASHKGMLVDALLPKLLESTMMLDVQSISLGGKHAALI 335

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           TK G+IFSWG+G  G+LGH +  D+ +PKL+D+LNG     VACGE+ TCA+T +G++YT
Sbjct: 336 TKHGEIFSWGQGKCGRLGHKINMDLDHPKLVDSLNGIAAKSVACGEYQTCALTKAGEVYT 395

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WGD         + +  S W+P+K+SG ++G+ IS++ CG WHTA +++ G+LFT+GDGT
Sbjct: 396 WGDSRFGADFDCEENSRSRWLPQKLSGPLKGISISNVACGEWHTAVVSACGRLFTYGDGT 455

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA---GKTSGSNGLSSKKL 488
           FGALGHG+  S S P+EVE+L  L     +CG WHTAAIV++     K   + G    KL
Sbjct: 456 FGALGHGNLISLSQPKEVESLNGLCVKSVACGSWHTAAIVDIMIDRFKFKSAVG----KL 511

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           FTWGDG +G+LGHGD E +++P CV    D  F +V+CG  +T+ LT  G+V++MGS+ +
Sbjct: 512 FTWGDGDKGKLGHGDNERKLLPTCVAPLVDCDFAQVSCGRMLTVGLTNMGRVYTMGSSIH 571

Query: 549 GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           GQLG+  S       +EG +K  +++ I+ GSYH+A ++S   VYTWGKGA+GQLG GD+
Sbjct: 572 GQLGNLSSRDASVAIVEGKLKEEFVKAISSGSYHVASLTSTGRVYTWGKGAHGQLGLGDS 631

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNC 668
           +++  PT VEAL DKQV+S+ CGSNFTAAICLH+ ++ +D S C GC+  F F R++HNC
Sbjct: 632 DDRNLPTFVEALGDKQVESIACGSNFTAAICLHRSITSSDQSSCYGCKLPFGFTRKKHNC 691

Query: 669 YNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCF--IKLNTTSESGSNSQIPRNSSGL 726
           Y+CGL +C++CSSKK+   ALAP  +K +RVCD CF  ++ +   +     +  R  + L
Sbjct: 692 YHCGLYFCRMCSSKKTTNAALAPNKSKAFRVCDPCFNILRRHIHLDRSLKQENTRTQNSL 751

Query: 727 FQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNKISASPPG 786
            Q  ++V+  E ++ RS +   S         SP+     + + +  FI   + +     
Sbjct: 752 KQ--QKVSGFERVDKRSMSSKHSP------LLSPTKQNIDEMQSHWKFINQGE-NQQDLE 802

Query: 787 SRRVSRAPS--PISRKSSPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLE 844
           +   S  PS   +S  +S   +I+++ F               +++  ++E   LR +++
Sbjct: 803 TFTSSGIPSWGQVSCPASFKIAISLDRFL------------YGSSEKLSEEVQRLRTEVK 850

Query: 845 DLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSL 888
           +L  +    + ++++  +K++E   +A+EEA K KAA+E+I++L
Sbjct: 851 NLELQCNDGDEKMQKCRQKIEEAWSVAREEAAKCKAAKEIIKAL 894


>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
 gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
          Length = 879

 Score =  600 bits (1546), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 315/682 (46%), Positives = 448/682 (65%), Gaps = 21/682 (3%)

Query: 222 RSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADR 281
           +S ++   RIS+SSA+S+SS GS  ED +  GD+++WGE + + +     +    S    
Sbjct: 4   KSVSSSDIRISVSSALSTSSHGSGGEDSESFGDIYVWGEVICDTISRSGSDRSAYSPGTT 63

Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL 341
            D L+PK LES V+LD   +ACG KHA LVT+Q ++F+WGE   G+LGHG   +V  P+L
Sbjct: 64  TDVLVPKPLESNVMLDVSYVACGVKHAALVTRQSEVFTWGEECSGRLGHGTGTNVFQPRL 123

Query: 342 IDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQME 401
           +++L+  N+ ++ACGEFHTCAVT +GDLYTWGDG HN GLLG  S +SHWIP++VSG ++
Sbjct: 124 VESLSICNVELIACGEFHTCAVTATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLD 183

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           GL +S++ CG WHTA ITS+G+L+TFGDGTFG LGHG+R+S S P+EVE+LK L+T+  S
Sbjct: 184 GLPVSTVSCGTWHTALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESLKGLRTISVS 243

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
           CGVWHTAA+VEV    S SN  SS KLFTWGDG + +LGHGD   ++ P C+    D +F
Sbjct: 244 CGVWHTAAVVEVI--ISQSNA-SSGKLFTWGDGDKYRLGHGDRSSKLKPTCIPSLIDYNF 300

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
            K ACGH++TI LT +G +F++GS+ YGQLG+P + G++P  +E  +    + ++ACGSY
Sbjct: 301 HKAACGHTLTIGLTTSGHIFTVGSSVYGQLGNPNNDGRYPRLVEEQLGGGGVVEVACGSY 360

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
           H+AV+++  EVYTWGKGANG+LGHGD  +++ PTLVEALRD+ VK V CGS+FTAAIC H
Sbjct: 361 HVAVLTNAGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRVACGSSFTAAICQH 420

Query: 642 KGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCD 701
           K VS  + S CS CR  F F R+RHNCYNCGLV+C  CSSKK+++ AL+P   KPYRVCD
Sbjct: 421 KWVSGMEQSQCSACRQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRVCD 480

Query: 702 DCFIKLNTTSESG---SNSQIPRNSSGLFQNCKRVTEKENMNSRSAT-------DGQSKP 751
            C++KL+   +SG   S + IPR         +R+  K N  + S++       D ++  
Sbjct: 481 SCYVKLSKVLDSGVSYSRNTIPRIPGD--TKAERIDTKANKVAPSSSSDMIRNLDVKAAK 538

Query: 752 KGKSYHASPSLNGKFQWEPNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSITMNS 811
           + K    S  +    Q + +  FI +  +  S   S   ++ P   SR + P   +   +
Sbjct: 539 QTKKSDYSSQVPAMLQLK-DIPFISAPDLQNS---STVANQFPYD-SRSTLPFLRMPYLN 593

Query: 812 FTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIA 871
           ++   +SE      +  N+   QE   L+A++  L ++ +  + EL+++  K  E   +A
Sbjct: 594 YSSSLSSESSES-LRDANELLKQEVQKLQAEVNSLRQEREQQDTELKKSEAKAHEAMNLA 652

Query: 872 QEEAEKNKAAQEVIRSLTAQAR 893
            EEA K K A++VI++LTAQ +
Sbjct: 653 TEEASKLKTAKDVIKALTAQLK 674


>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
           [Brachypodium distachyon]
          Length = 1005

 Score =  593 bits (1530), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 349/925 (37%), Positives = 508/925 (54%), Gaps = 123/925 (13%)

Query: 12  RDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIP 71
           R  EQA+  LKKG +LLK G+RGKPKFCPF+LSSDEK+LIWY+ + EK L LS+VS ++ 
Sbjct: 13  RGVEQAIVALKKGAHLLKCGKRGKPKFCPFKLSSDEKMLIWYSKEREKHLSLSYVSSVVL 72

Query: 72  GQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISE-------- 123
           GQ+T                           ICKD+++ E W+  L AL+S         
Sbjct: 73  GQKT---------------------------ICKDREQVECWYLGLTALLSALYSPLLLV 105

Query: 124 DNRCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
           D+    R +S +S SP S+ Q+ S       +   T   S    P L+      QN+L K
Sbjct: 106 DSTSSRRINSCTS-SPPSYIQQKSRLFSVHDTRKFTQVHSLYGSPRLI------QNKLSK 158

Query: 184 A-------FSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFR---ISL 233
           +       F      T +   +   +   + +N V +   D      + AD+ +   I+ 
Sbjct: 159 SNLDCSEPFVSPRQRTWSDLDFYMEKFTPEMINRVKNSFQD-----LTVADTIKEQGITQ 213

Query: 234 SSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLEST 293
              +  S         D L D+F+WG+     +LG  ++  + S A+     LP++L ST
Sbjct: 214 MPKLKPSEGSHVAYGTDSLKDIFVWGD-----VLGSVLDDRDTSKAN---VSLPRLLNST 265

Query: 294 VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMV 353
            +LD Q+++CG KHA +VTKQG++FSWG+  GG+LGH V   V +PK+I++L  +++  +
Sbjct: 266 QILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAI 325

Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
           A G  HTCA+ +SG+L+ WG+G H+LG+     + S W P K+ G +EG+ +  + CG W
Sbjct: 326 AFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQW 385

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           HTA I+S+G+LFT+GDGTFG LGHGD SS + P+EVE+LK L+    +CG WHTAAIVE+
Sbjct: 386 HTAIISSSGQLFTYGDGTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAIVEI 445

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
            G T  SN   S KLFTWGD   G+LGH D E ++VP CVK   D  F +V+C  ++T+A
Sbjct: 446 LG-TVKSNA-PSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTDSDFAQVSCAKALTVA 503

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
           LT TG VF++GS ++GQLGS          +EG +K  ++ +I+ GS H+AV++   +V+
Sbjct: 504 LTITGVVFTIGSKEHGQLGSHRLDDSSICSVEGPLKTEFVREISSGSSHVAVLTMNGKVF 563

Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICS 653
           TWGKG  GQLG G+  ++ +PTLVEAL DKQV S+ CGSNFT A+CLH+ +S  D S+CS
Sbjct: 564 TWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACGSNFTVAVCLHRSISGKDQSVCS 623

Query: 654 GCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSES 713
            CR  F+F R++HNCYNCG ++C  CS+ K  + AL P+ NK YRVCD CF +L    E 
Sbjct: 624 RCRLSFSFARKKHNCYNCGSMFCNSCSNNKVSRAALGPDRNKRYRVCDACFTQLQKNEEC 683

Query: 714 GSNSQ---------IPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNG 764
           G+ S           P           R+ ++ N    S  +  +  +G  YH       
Sbjct: 684 GTVSSRLTIEKEEAFPTEIRAYTPKLSRIFKEAN----SIMEKMALAQG--YH------- 730

Query: 765 KFQWEPNSDFIKSNKISASPPGSRRVSR-----APSPI--SRKSSPACSITMNSFTDLAN 817
               + N D         + P   R+ R      PS    +R S P CS +     D   
Sbjct: 731 ----QRNQDL--------AAPDQLRIQRWGQVECPSQFRCARNSIPCCSTSKEQTVD--- 775

Query: 818 SEVIFEYSKQTNDNFNQEPDV-----------LRAQLEDLTRKSQFLEVELERTSRKLKE 866
            E +   S Q+  +   E D            L+A +  LT + ++  ++++   +K++E
Sbjct: 776 -ESVPAKSAQSASSLKAELDSTEKILLEEVKQLQAHVTTLTEQCRYRSLKVQLCKQKVEE 834

Query: 867 TTQIAQEEAEKNKAAQEVIRSLTAQ 891
           T  I ++EA K KAA+E+I+ LT Q
Sbjct: 835 TWLIVRDEAAKCKAAKEIIKVLTNQ 859


>gi|357165462|ref|XP_003580391.1| PREDICTED: uncharacterized protein LOC100842512 [Brachypodium
           distachyon]
          Length = 1023

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 346/906 (38%), Positives = 506/906 (55%), Gaps = 82/906 (9%)

Query: 12  RDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIP 71
           R  EQA+  LKKG +LLK G+RGKPKFCPFRLSSDEK L+WY+   EK L L+ VS +I 
Sbjct: 12  RGVEQAIVALKKGAHLLKCGKRGKPKFCPFRLSSDEKTLVWYSKDREKHLSLNSVSTVIL 71

Query: 72  GQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDNRCKS-- 129
           GQ+T                           IC+D+D+AE W   L ALIS  +   S  
Sbjct: 72  GQKT---------------------------ICRDRDQAECWHLGLTALISAHSPFSSVG 104

Query: 130 ----RSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAF 185
               R  +  +++PRS+ Q+ S   +S++     +K      P   + + +P++  G   
Sbjct: 105 SKSGRQITSCTNTPRSYIQRKS--KLSAVHDTPRHKQ---VYPSYGSPKMTPKDFFGSYL 159

Query: 186 --SEVLSFTAAAKAYTRAESVSKSLN----FVASGGLDD--ANSRSSTADSFRISLSSAV 237
             SE L F    + ++  +S  + LN      A  GL D    ++  T  + + +L +  
Sbjct: 160 DCSEAL-FYQRQQTFSDVDSYLEKLNPKVTNPARHGLKDILVGNKHKTQITQKPNLKTF- 217

Query: 238 SSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLD 297
               + +C    D L DVF+WG+     +LG  ++  +I  A      LP+++ ST +LD
Sbjct: 218 -EVPRAACR--LDSLNDVFLWGD-----VLGSMLDSEDIPKA------LPRLVASTTMLD 263

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            QSIACG  HA +VTK G++FSWG  S   LGH +   VS PKL++AL   ++  VA G 
Sbjct: 264 VQSIACGENHAAIVTKLGEVFSWGNESSRTLGHQINDSVSCPKLVEALASVHVKAVAFGS 323

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
            HTCAVT+SG+L  W +G H LGLL    E + W P K+ G M+ + +S I CG WHTA 
Sbjct: 324 KHTCAVTVSGELLEWSEGAHRLGLLSNWYERNQWSPHKLFGPMDSISVSKIACGEWHTAI 383

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           ITS+G+LFT+GDGTFG LGHGD+   + P+EVE+LK L+    +CG WHTAA+VEV   +
Sbjct: 384 ITSSGQLFTYGDGTFGVLGHGDKQGIARPKEVESLKGLRVKSVACGPWHTAAVVEVT--S 441

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
           S +    S KLFTWGD   G+LGH D + ++VP CV +     F +V+CG ++T+ LT+T
Sbjct: 442 SFNCNAPSGKLFTWGDADRGKLGHADKKIKLVPTCVDLLTSYDFLQVSCGAALTVVLTST 501

Query: 538 GQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
           G VF++GS+ +GQLG+P + G+    +EG +K+ ++ +I+ GS H+AV++ K +V+TWGK
Sbjct: 502 GVVFTIGSSKHGQLGNPHADGESICTVEGTLKNEFVREISSGSSHVAVLTLKGQVFTWGK 561

Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRN 657
           GA+GQLG GD +N+ +PTLVEAL+ + V+S+ CGSNF+AA+CLHKG+S+ D SICSGC+ 
Sbjct: 562 GADGQLGLGDYDNRSSPTLVEALQGRHVQSIACGSNFSAAVCLHKGMSVKDQSICSGCQM 621

Query: 658 QFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNS 717
            F F R++H+CYNCG ++C  CSS K  K     + N+ YRVCD CF +L    +S    
Sbjct: 622 AFGFTRKKHSCYNCGSMFCNSCSSNKIAKA----DKNRRYRVCDVCFCQLQKVVDSSKFK 677

Query: 718 QIPRNSSG-LFQ--------NCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQW 768
             P+ S G +F+           R+ ++ N+        Q   +     A P      +W
Sbjct: 678 PQPKISKGDMFRAEIKAYTPKLSRLFKEANLIVEKMAAVQGPNQKNVDSAIPIQEKTRRW 737

Query: 769 ---EPNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYS 825
              E    F+ + +     P S     + S   R          NS     +S+   E  
Sbjct: 738 GQVECPGQFVSARENFKHQPISNNQMHSVSFSQRMHDSVGLKVGNSLRRSTDSQK--EEL 795

Query: 826 KQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVI 885
             T     +E   LR+Q+  L  + Q   +  +   ++L ET  + ++EA K KAA+++I
Sbjct: 796 TMTETMLKEEVKQLRSQVTALGEQCQQKNLIAQLYKQRLDETWLLVRDEAAKCKAAKDII 855

Query: 886 RSLTAQ 891
           + LT Q
Sbjct: 856 KVLTNQ 861


>gi|297598384|ref|NP_001045490.2| Os01g0964800 [Oryza sativa Japonica Group]
 gi|255674106|dbj|BAF07404.2| Os01g0964800, partial [Oryza sativa Japonica Group]
          Length = 496

 Score =  572 bits (1475), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 277/498 (55%), Positives = 369/498 (74%), Gaps = 3/498 (0%)

Query: 220 NSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSA 279
           +++ +++D  R+S SSA S+SS GS  +D D  GDV++WGE + +  +    + V + S 
Sbjct: 2   HTKGASSDVIRVSTSSAPSTSSHGSAQDDCDSSGDVYVWGEVICDNSVRTGSDTV-VRST 60

Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
            R D L PK LES +VLDA  + CG KH+ LVTK G++F+WGE SGG+LGHG   D  +P
Sbjct: 61  VRTDVLRPKPLESNLVLDAYHVDCGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSIHP 120

Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ 399
           +LI++L   N+ +VACGEFHTCAVT +G+LYTWGDG HN+GLLG   ++SHWIP++++G 
Sbjct: 121 RLIESLAVCNVDIVACGEFHTCAVTTAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGA 180

Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
           +EGL ++ + CG WHTA IT+ G+LFTFGDGTFG LGHG+R S S P+EVE+L  LKT+ 
Sbjct: 181 LEGLAVAYVSCGTWHTALITTMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSGLKTIS 240

Query: 460 ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
            +CGVWHTAAIVEV   T  S+ +SS KLFTWGDG + +LGHGD EPR+ P CV    D 
Sbjct: 241 VACGVWHTAAIVEVI-VTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY 299

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
            F ++ACGHS+T+ LT +G+V SMG+  YGQLG+P S GK P  +E  +    ++ +ACG
Sbjct: 300 DFHRIACGHSLTVGLTTSGKVLSMGNTVYGQLGNPRSDGKIPCLVEEIVGENVVQ-VACG 358

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
           SYH+AV++ KSEV+TWGKGANG+LGHGD E+++ PTLVEALRD+ V+ + CG+NFTAAIC
Sbjct: 359 SYHVAVLTIKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSVRHIACGANFTAAIC 418

Query: 640 LHKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRV 699
            HK VS A+ S C+ CR  F F R+RHNC+NCGLV+C  C+S+K+++ ALAP   KPYRV
Sbjct: 419 QHKWVSGAEQSQCASCRQPFGFTRKRHNCHNCGLVHCNACTSRKAVRAALAPNPAKPYRV 478

Query: 700 CDDCFIKLNTTSESGSNS 717
           CD CF+KLN   +S + S
Sbjct: 479 CDSCFLKLNNAVDSSAIS 496


>gi|242066354|ref|XP_002454466.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
 gi|241934297|gb|EES07442.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
          Length = 1003

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 343/906 (37%), Positives = 493/906 (54%), Gaps = 102/906 (11%)

Query: 12  RDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIP 71
           R  EQA+  LKKG++LLK G+RGKPKFC  RLS DE+ LIWY+ + EK+L L+ VS ++ 
Sbjct: 15  RGVEQAIITLKKGSHLLKCGKRGKPKFCTVRLSYDERALIWYSKEREKRLSLNSVSSVVL 74

Query: 72  GQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCKS 129
           GQ+T    R   PEKE  S S+IY+N   SLDL+                          
Sbjct: 75  GQKTTKLLRLHWPEKESHSLSVIYKNGESSLDLV-------------------------- 108

Query: 130 RSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVL 189
                       H+   SP     I +   + +   ++P       SP+    KA+SE+ 
Sbjct: 109 ------------HSLYGSPR---LIQNKYLHSNLDCSEPFF-----SPRQ---KAWSELD 145

Query: 190 SFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDF 249
           S+          E +S  L       L D  S  +  D   I +       S+GS +   
Sbjct: 146 SY---------LEKISPELVNRVKNNLRDIRSAETIKDQRIIQMPKL--KQSEGS-NAAT 193

Query: 250 DGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAV 309
           D L D+F+WG+ LG     G V    IS        LP++L+S+ +L+ QSIACG KHA 
Sbjct: 194 DSLKDIFVWGDVLGRMSDHGHVPATNIS--------LPRLLKSSQILNVQSIACGEKHAA 245

Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
           +VTKQGQ+FSWGE +GG+LGH     VS PK+ID+L  + +  +A G  +TCAV++SG+L
Sbjct: 246 IVTKQGQVFSWGEENGGRLGHKTSDSVSDPKIIDSLASTPVKTIAFGAKYTCAVSVSGEL 305

Query: 370 YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
           Y WG+GIH+LG      + S W P K+    +G+ +  I CG WHTA I+S GKL+T+G 
Sbjct: 306 YEWGEGIHSLGFGKNQCQRSPWFPHKLISTSDGISVLKIACGQWHTAIISSLGKLYTYGY 365

Query: 430 GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG--KTSGSNGLSSKK 487
           GTFG LGHGD  S   P+EVE+L+  +    +CG WHTAAIVE +G  K+S   G    K
Sbjct: 366 GTFGVLGHGDTHSVVHPKEVESLRGSRAKSVACGPWHTAAIVETSGTLKSSAPGG----K 421

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           LFTWGD   G+LGH + + ++VP  V+   D  F +V+CG S+T  LT TG VF++GS +
Sbjct: 422 LFTWGDAGGGKLGHTNKKSKLVPTRVESLIDCDFTQVSCGMSLTAVLTITGVVFTIGSKE 481

Query: 548 YGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
           +GQLG+  S       +EG +K  +++DI+CGS H+AV++   +V+TWGKG  GQLG GD
Sbjct: 482 HGQLGNSRSDNTSICMVEGPLKTEFVKDISCGSSHVAVLTMNGKVFTWGKGTEGQLGLGD 541

Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHN 667
             ++ +PTLVEAL DKQV S+ C SNFTA  C+H+ +S  D S+CS CR  F F R++HN
Sbjct: 542 YVDRSSPTLVEALEDKQVDSIACSSNFTAVTCVHREISSKDQSVCSSCRLAFRFTRKKHN 601

Query: 668 CYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGS---NSQIPRNSS 724
           CYNCG ++C  CSS K  + ALAP+ +K  RVCD CF +LN T++ G     S+  +  S
Sbjct: 602 CYNCGSMFCNSCSSNKVQRAALAPDKSKRCRVCDACFNELNKTAQHGKMSCGSKTQKEES 661

Query: 725 GLFQN------CKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWE----PNSDF 774
            L +         R+ ++ N         QS  +     A+ +   + +W     P+   
Sbjct: 662 SLTETRTYTPKLSRMLKEANFIMEKMGSAQSPNQRNQESATLNQMQRQRWGQVECPDQFK 721

Query: 775 IKSNKISASPPGSRR------VSRAPSPISRKSS---PACSITMNSFTDLANSEVIFEYS 825
              + I       ++      + R   P+S+K++   P  +       DL   +++ E  
Sbjct: 722 CARDNIPHWLTSKKQTIDVLCIGRMTDPVSQKTTAPLPQATNDRRKEQDLME-KILLEEV 780

Query: 826 KQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVI 885
           KQ          +L  Q+  L  + +   ++++   RKL+ET  I ++EA K KAA+E+I
Sbjct: 781 KQLQAQM--VILLLPKQVTTLAEECRHRSLKVQLYKRKLEETWLIVKDEATKCKAAKEII 838

Query: 886 RSLTAQ 891
           + LT Q
Sbjct: 839 KILTNQ 844


>gi|356506490|ref|XP_003522014.1| PREDICTED: uncharacterized protein LOC100798841 [Glycine max]
          Length = 1162

 Score =  560 bits (1443), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 310/714 (43%), Positives = 443/714 (62%), Gaps = 56/714 (7%)

Query: 215 GLDDAN--SRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVN 272
           GL+ AN   R+S  D FR+S SS  S+SS GS  +D D    V+IWGE L NG+    + 
Sbjct: 118 GLEHANMQPRASVGDGFRVSASSTPSNSSGGSEPDDIDSFHAVYIWGEVLANGVSPDGI- 176

Query: 273 GVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV 332
           G +I S  + D L+PK LES V LD   IA G+ H  + T+QG +F+WG+ SGG+LGHG+
Sbjct: 177 GTQIPS--KTDVLIPKALESNV-LDVCHIATGAHHIAIATRQGHVFTWGQESGGRLGHGI 233

Query: 333 EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI 392
           + D S P L++ L G+N   VACGE+HT A++ S +LYTWGDG HN+GLLG  SE SHWI
Sbjct: 234 DKDFSSPVLVEFLEGNNFEFVACGEYHTSALSKSFELYTWGDGTHNVGLLGHGSEASHWI 293

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
           P+ V+G +EGLQ+ SI CG WH+A  TS GKLFTFGDG FG LGHGD+ S   P+EV+ L
Sbjct: 294 PKMVNGPLEGLQVVSIACGTWHSALATSNGKLFTFGDGAFGVLGHGDQESVWYPKEVQLL 353

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC 512
             LKT+  +CGVWHTAAI+EVA + SGSN  SS KLFTWGDG   +LGHG+ E  + P  
Sbjct: 354 TGLKTIKVACGVWHTAAIIEVAFQ-SGSNS-SSWKLFTWGDGDMHRLGHGNKETYLQPTR 411

Query: 513 VKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY 572
           V    + +F +V CGH++TIALT +G VF+MG  ++GQLG+P S GK PT ++  +   +
Sbjct: 412 VAPLMEYNFHQVECGHNMTIALTTSGHVFTMGGTEHGQLGNPMSLGKIPTLVQDKLLGEF 471

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
           +E I+CG++H+A++++KSE+YTWG GANG+LGHGD E++++PTLV AL+D+ +K+V CGS
Sbjct: 472 VEKISCGAHHVAILTNKSEIYTWGMGANGRLGHGDVEDRKSPTLVVALKDRNIKNVSCGS 531

Query: 633 NFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMK-TALAP 691
           NFT+ IC+HK VS  D SI +G R  F   ++RHNC+NCGL     CSSKK++K T L P
Sbjct: 532 NFTSCICVHKWVSETDQSIYNGFRQAFGLTKKRHNCHNCGLA----CSSKKTLKATTLTP 587

Query: 692 EINKPYRVCDDCFIKLNTTSESGSNSQIPRN---SSGLFQNCKRVTEKENMNSRSATDGQ 748
              KP+RVCD+C +KL   +++G+ S++ R    S       +R+ +    ++R+     
Sbjct: 588 TPEKPHRVCDNCNVKLKVVNDNGA-SKLDRKVTPSHHSINGNERLGQGTIRSTRTLLSPI 646

Query: 749 SKPKGKSYHASPSLNGKFQWEPNSDFIKSNKIS--------------------------- 781
           ++P    Y    + N K +++  S FI+++++                            
Sbjct: 647 TEP--IKYLEIKNSNPKNKFDSTS-FIRASQVPSHVQLKDIAFPSSLSSSQSVLKSTIPL 703

Query: 782 ASPPGSRRVSRAPSPI---SRKSSPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPDV 838
           ASPP +        PI   +RK SP    +   F  L N+       ++TND  NQE   
Sbjct: 704 ASPPRTPPPHTNSGPIFTNTRKQSPTRLASPRYFGSLNNN------LRRTNDALNQEVSK 757

Query: 839 LRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQA 892
           L+ Q++ L ++S   +VE+++ ++K+ E    +  E+  +   +E   S   Q+
Sbjct: 758 LQNQIQSLKQRSDMQDVEIKKLNKKVVEAIAFSAVESSNHGVTKEFFESTVYQS 811


>gi|296086390|emb|CBI31979.3| unnamed protein product [Vitis vinifera]
          Length = 429

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 296/457 (64%), Positives = 356/457 (77%), Gaps = 37/457 (8%)

Query: 1   MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ 60
           MA  Q+N L ERD EQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIWY+GKEEKQ
Sbjct: 1   MADPQRNGLAERDVEQAIVALKKGAYLLKYGRRGKPKFCPFRLSNDESMLIWYSGKEEKQ 60

Query: 61  LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRAL 120
           LKL++VSRIIPGQRT +FQRYP+PEKEYQSFSLIY +RSLDLICKDKDEAE+WF  L+ L
Sbjct: 61  LKLNNVSRIIPGQRTPIFQRYPRPEKEYQSFSLIYGDRSLDLICKDKDEAEVWFIGLKGL 120

Query: 121 ISEDN----RCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENS 176
           IS  N    R + R DSISS+SP S  ++ SPS        L++ D GDTQ   V +EN 
Sbjct: 121 ISRGNYRKWRSEIRDDSISSESPHSRARRISPS--------LSSSDPGDTQQTQVTFENI 172

Query: 177 PQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSA 236
           PQ+ LGKAFS+V+S+TA+ K++T+AESV+ SL+ ++SGG+D++N R+S +++FR+SLSSA
Sbjct: 173 PQSGLGKAFSDVISYTASTKSFTQAESVASSLSSLSSGGVDNSNGRTSASENFRVSLSSA 232

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           VSSSSQGS H+DFD LGDVF+WGEG+G+G++G  V+ V  SS+ + DALLPK LESTVVL
Sbjct: 233 VSSSSQGSGHDDFDALGDVFMWGEGIGDGIMGAGVHRVGSSSSTKIDALLPKALESTVVL 292

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG 356
           D  SIACG KHAVLVTK+G++FSWGE  G +LGHGVE DVS+PKLIDAL G NI +VACG
Sbjct: 293 DVHSIACGGKHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACG 352

Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
           E+H+CAVTLSGDLYTWGDG HN GLLG  SE SHWIP+KVS                   
Sbjct: 353 EYHSCAVTLSGDLYTWGDGTHNSGLLGHGSEASHWIPKKVS------------------- 393

Query: 417 AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
                 +LFTFGDGTFGALGHGD SS S+PREVE L+
Sbjct: 394 ------QLFTFGDGTFGALGHGDHSSMSIPREVEALR 424



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 29/171 (16%)

Query: 367 GDLYTWGDGIHNLGLLG---------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           GD++ WG+GI + G++G           ++I   +P+ +   +  L + SI CG  H   
Sbjct: 249 GDVFMWGEGIGD-GIMGAGVHRVGSSSSTKIDALLPKALESTVV-LDVHSIACGGKHAVL 306

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI-----VE 472
           +T  G++F++G+     LGHG     S P+ ++ L  +   + +CG +H+ A+     + 
Sbjct: 307 VTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTLSGDLY 366

Query: 473 VAGKTSGSNGL-------------SSKKLFTWGDGAEGQLGHGDAEPRVVP 510
             G  + ++GL                +LFT+GDG  G LGHGD     +P
Sbjct: 367 TWGDGTHNSGLLGHGSEASHWIPKKVSQLFTFGDGTFGALGHGDHSSMSIP 417



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 46/204 (22%)

Query: 427 FGDGTFGALGH--GDRSSTSV----PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            GDG  GA  H  G  SST +    P+ +E+   L     +CG  H A +V   G+    
Sbjct: 258 IGDGIMGAGVHRVGSSSSTKIDALLPKALESTVVLDVHSIACGGKH-AVLVTKKGE---- 312

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
                  +F+WG+    +LGHG       P  +     ++   VACG   + A+T +G +
Sbjct: 313 -------VFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGEYHSCAVTLSGDL 365

Query: 541 FSMGSADY--GQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
           ++ G   +  G LG       + P ++                         S+++T+G 
Sbjct: 366 YTWGDGTHNSGLLGHGSEASHWIPKKV-------------------------SQLFTFGD 400

Query: 598 GANGQLGHGDNENKQTPTLVEALR 621
           G  G LGHGD+ +   P  VEALR
Sbjct: 401 GTFGALGHGDHSSMSIPREVEALR 424



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 38/68 (55%)

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
           +  IACG  H  +V+ K EV++WG+    +LGHG   +   P L++AL    ++ V CG 
Sbjct: 294 VHSIACGGKHAVLVTKKGEVFSWGEECGSRLGHGVEVDVSHPKLIDALCGMNIELVACGE 353

Query: 633 NFTAAICL 640
             + A+ L
Sbjct: 354 YHSCAVTL 361


>gi|125549477|gb|EAY95299.1| hypothetical protein OsI_17124 [Oryza sativa Indica Group]
          Length = 1042

 Score =  552 bits (1423), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 342/915 (37%), Positives = 490/915 (53%), Gaps = 96/915 (10%)

Query: 12  RDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIP 71
           R  EQA+  LKKG +LLK+G+RGKPKFCPFRLSSDEK L+WY+   EK L L+ VS ++ 
Sbjct: 12  RGVEQAIVALKKGAHLLKFGKRGKPKFCPFRLSSDEKTLVWYSKDREKHLSLNSVSTVVL 71

Query: 72  GQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDNRCKSRS 131
           GQ+T                           IC+D+D+AE WF  L AL S        +
Sbjct: 72  GQKT---------------------------ICRDRDQAECWFLGLTALTSSPYSPLPLA 104

Query: 132 DSIS-------SDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKA 184
            S S       + SPRS+ Q+        +S+ L   D+     +  +Y  SP+    K 
Sbjct: 105 GSKSGRQINSCAISPRSYLQRKC-----RLSAAL---DTPRHTQVYPSY-GSPKIIQKKI 155

Query: 185 F------SEVLSFTAAAKAYTRAESVSKSLN----FVASGGLDDANSRSSTADSFRISLS 234
           F      SE L F      +   +S  + LN         GL D    +  A +   +  
Sbjct: 156 FGGNLDSSEAL-FYPRHPTFCDIDSYIEKLNPKIATPVKHGLKDIMVANRRAQNITHTPK 214

Query: 235 SAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTV 294
                  + +C    D L DVF+WG  LG+ +LG      +I  +      LP+++ S  
Sbjct: 215 LKTFEGPRVACR--LDSLKDVFLWGSVLGS-MLGSE----DIPKS------LPRLVGSAK 261

Query: 295 VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA 354
           +LD QSIACG  HA ++TKQG++++WG  S G+L   V  + S PK++++L   ++  VA
Sbjct: 262 MLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVA 321

Query: 355 CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G  HTCA+T+SG+L+ WG+G H+LGL+      + W P K  G M+ + +S I CG WH
Sbjct: 322 FGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWH 381

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           TA ITS+G+LFT+GDGTFG LGHGD    + P+EVE+LK  +    +CG WHTAAIVEV 
Sbjct: 382 TAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPWHTAAIVEVM 441

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
               G+    S KLFTWGD   G+LGH D + +++P CV         +V+CG ++T+ L
Sbjct: 442 SSFKGN--APSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVVL 499

Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
           T TG VF++GS+ +GQLG+P + G+    +EG +K  ++ +I+ GS H+AV++   +V+T
Sbjct: 500 TVTGMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFT 559

Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSG 654
           WGKGA GQLG GD  N+ +PTLVEAL  + V+SVVCG NFTAAICLHK +S+ D S+CS 
Sbjct: 560 WGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFNFTAAICLHKTMSMKDQSVCSS 619

Query: 655 CRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESG 714
           C+  F F R++HNCYNCG ++C  C+S K    ALAP+ N+ YRVCD CF +L    +S 
Sbjct: 620 CQMVFGFTRKKHNCYNCGSMFCSSCTSNKITMAALAPDTNRRYRVCDACFYQLQKVVDSS 679

Query: 715 SNSQIPRNSSG----------------LFQNCKRVTEKENMNSRSATDGQSKPKGKSYHA 758
            +    + S G                LF+      EK  M S   T+ +++    +   
Sbjct: 680 KDKSRLKISKGEMFKLELKAYTPKLSRLFKEANFFAEK--MASVQGTNQRNEEPATAVQT 737

Query: 759 SPSLNGKFQWEPNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPAC--SITMNSFTDLA 816
                G  Q E  + FI +     + P S     A S   R    A   S     FTD  
Sbjct: 738 KTERWG--QVECPALFISAQDSFQTQPVSNSEGCAISFSQRMHDSAVLKSGVSLRFTDAQ 795

Query: 817 NSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAE 876
             E+     +        +   L +Q+  LT + Q   V ++   +KL +T  + ++EA 
Sbjct: 796 REEI-----EMMQTELQGQVKQLHSQVAVLTEQCQQKSVMVQLYKQKLDDTWLVVRDEAA 850

Query: 877 KNKAAQEVIRSLTAQ 891
           + KAA+++I+ LT Q
Sbjct: 851 RCKAAKDIIKVLTDQ 865


>gi|414585739|tpg|DAA36310.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1044

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 333/908 (36%), Positives = 493/908 (54%), Gaps = 78/908 (8%)

Query: 12  RDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIP 71
           R  EQA+  LKKG +LLK G+RGKPKFC FR+SSDE  LIWY+   EK L LS VS ++ 
Sbjct: 12  RGVEQAIVALKKGAHLLKCGKRGKPKFCAFRISSDETTLIWYSKGREKHLSLSSVSAVVL 71

Query: 72  GQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISED-NRCKSR 130
           GQ+T                           IC D+D+AE W+  LRAL+    N C   
Sbjct: 72  GQKT---------------------------ICSDRDQAENWYLGLRALLPTPCNPC--- 101

Query: 131 SDSISSDSPRS-HTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAF---- 185
             SI S S R   +  N+PS    + S L +         + + +  P+   G  F    
Sbjct: 102 -SSIESRSSRQIDSCTNTPSSYIQLKSKLLSVHGTPRHIQVCSSQRKPKKAHGTFFGGSA 160

Query: 186 --SEVLSFT---AAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSS 240
             SE L +T     +   T  E++++ ++      L D    +   +  +I+ +  + + 
Sbjct: 161 DCSESLFYTRQRTFSDIGTYLENLTRKMSNPEIHDLKDVMVGNQEKEQ-KITQTPKLKTF 219

Query: 241 SQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQS 300
                    D L DVF WG+  G+ L  G  +             LP +++ST +LD QS
Sbjct: 220 EGPRAACRLDSLKDVFFWGDAFGSILECGDTS-----------KPLPMLVDSTNMLDVQS 268

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           IACG  HA ++TKQG+++SWG  S G++G+ V   VS PK++ +L   ++  VA G  HT
Sbjct: 269 IACGETHAAIITKQGEVYSWGNESSGRIGNQVNIKVSRPKVVQSLASLHVKDVAYGSKHT 328

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEIS--HWIPRKVSGQMEGLQISSICCGPWHTAAI 418
           CAVT+SG+L  WG+G +    +GQ+   +   W P K+   ++G+ +  I CGPWHTA I
Sbjct: 329 CAVTVSGELIEWGEGPY----MGQLDSYARNQWFPHKLFSPLDGISVVKIACGPWHTAII 384

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           TS+G+L+T+GDGTFG LGHGD   T+ P+EVE+LK  +    +CG WHTAAIVEV     
Sbjct: 385 TSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVESLKGSRVKCVACGPWHTAAIVEVISDFK 444

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
            ++  S  KLFTWGD   G+LGH D + +++P CV    D  F +V+CG ++T+AL+ TG
Sbjct: 445 SNSPRS--KLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYDFIQVSCGTALTVALSVTG 502

Query: 539 QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            VF+ GS+ +GQLG+P + GK  + +EG +K  ++  I+ GS H+AVV++  +V+TWGKG
Sbjct: 503 VVFTSGSSMHGQLGNPHADGKTVSAVEGLLKSEFVRHISSGSSHVAVVTTNGKVFTWGKG 562

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQ 658
             GQLG GD  N+ TPTLV+AL  + V+S+ CG N+TAA+CLHK +S  D S+CSGC+  
Sbjct: 563 KEGQLGLGDFLNRSTPTLVDALEGRHVESLSCGYNYTAAVCLHKVISRKDLSVCSGCKMA 622

Query: 659 FNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGS--- 715
           F F R++HNCY+CG ++C  CSS K  K ALAP+ ++ YRVCD CF +L    +SG    
Sbjct: 623 FGFTRKKHNCYHCGSMFCNSCSSNKVAKAALAPDKSRRYRVCDGCFSQLLKVVDSGKVKS 682

Query: 716 ------NSQIPRNS----SGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGK 765
                  ++I R+     S +F++     EKE +     ++ +++       A     G 
Sbjct: 683 ELNTSKGAEIIRSYTPKLSRIFRDVNLPVEKEKVALVQRSNQRNEVLYTPVQAKSQRWG- 741

Query: 766 FQWEPNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYS 825
            Q E  + F+ +   S     S+    + S   R   P    +  S     N +   + +
Sbjct: 742 -QVECPAQFLSAEDSSHYQSISKNHMYSASVSERMHDPTVLKSGRSLQQ-PNDDQRKDLN 799

Query: 826 KQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVI 885
                   +E   LR+Q+  L  +     +++E   +KL ET  I + EA K KAA+++I
Sbjct: 800 SIEETLLTEEVKQLRSQMTLLMEQYHQKALQVELYKQKLDETWLIVRNEAAKCKAAKDII 859

Query: 886 RSLTAQAR 893
           + LT Q +
Sbjct: 860 KVLTDQCK 867


>gi|225466229|ref|XP_002267377.1| PREDICTED: uncharacterized protein LOC100253065 [Vitis vinifera]
          Length = 1023

 Score =  549 bits (1415), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 352/929 (37%), Positives = 492/929 (52%), Gaps = 116/929 (12%)

Query: 8   ILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVS 67
           +  +R  EQA+  LKKG YLL+ GRRGKPKFCPFRLS+DEK LIWY+G+EEKQL+LS ++
Sbjct: 9   VPFDRAVEQAIVTLKKGAYLLRCGRRGKPKFCPFRLSTDEKFLIWYSGQEEKQLRLSSIT 68

Query: 68  RIIPGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDN 125
           +IIPGQRT  FQR  Q E+E +SFSL+Y N  RSLDLICKDK +A+ WF  L+A+IS   
Sbjct: 69  KIIPGQRTVNFQRQLQEERECRSFSLVYANGERSLDLICKDKAQADSWFLGLKAVIS--- 125

Query: 126 RCK-SRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLG-K 183
           RC+  R  S   +     T  NSP+       +L   +       + +   SP   L  +
Sbjct: 126 RCQHPRQLSTFRNCVGVQTCFNSPAGYFRRKHNLGLLEDTPKFSQVRSLCGSPTQSLSER 185

Query: 184 AFSEVLSFTAAAKAYTRAES------VSKSLN---FVASGGLDDANSRSSTADSFRISLS 234
            FS+ LS++A +   + +        V  SL    +V    L       +  +     LS
Sbjct: 186 CFSDGLSYSADSFYSSESSVSNVKNVVDVSLPSSPYVEPDHLKQGEEIYAGTEIQTDMLS 245

Query: 235 SAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTV 294
              + S      E  D L DV IWGEG+  G+LGG V      +  + DALLPK+LEST 
Sbjct: 246 QVAAPSHASPQMEKNDILRDVMIWGEGIEGGILGGGVYRFGNQNGMQSDALLPKLLESTT 305

Query: 295 VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA 354
           +LD + I+ G KHA LVTK G++F WGEGSGG+LGH V  D+  PK++++L G  +  V+
Sbjct: 306 MLDVREISLGGKHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESLTGVLVKSVS 365

Query: 355 CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
           CGE+ TCA+T SG+LYTWGD    + L+G+  + S WIP ++SG + G  IS++ CG WH
Sbjct: 366 CGEYQTCALTHSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWH 425

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            A ++++G+LFT+GDGTFG LGHG   S S P+EVE+L  L    A+CG WHTAAIVEV 
Sbjct: 426 MAIVSTSGQLFTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVEVR 485

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                 N     KLFTWGDG +G+LGHGD E +++P CV    D  F +V+CG  +T+ L
Sbjct: 486 ADRLKFN-TKGGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDHDFVQVSCGRMLTVGL 544

Query: 535 TATGQVFSMGS-ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
           T  G V++MG   D     SP         +   +++R +E IACGS   A +       
Sbjct: 545 TCLGTVYTMGRLGDTEDRNSPA--------VVEELRYRQVESIACGSGFTAAI------- 589

Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICS 653
                                                        CLHK +S  D S CS
Sbjct: 590 ---------------------------------------------CLHKSISSTDQSACS 604

Query: 654 GCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSES 713
           GCR  F F R++HNCYNCGL++C+ CS+KK +  +LAP   KP+RVCD C+  L     S
Sbjct: 605 GCRMAFGFTRKKHNCYNCGLLFCRACSNKKVLNASLAPNKKKPFRVCDPCYTYLQRIKHS 664

Query: 714 GSNSQIPRNSSGLFQNCKRVT--EKENMNSRSATDGQSKPKG-------KSYHASPSLN- 763
               ++  +S       ++ +  EKE+    +    Q    G       +SY   P  N 
Sbjct: 665 SRLLKLENHSPRQLLMTQKTSFDEKEDRGEGTPARTQFSSVGQPCNEASQSYEKKPFKNQ 724

Query: 764 --GKFQWEPNS-------------------DFIKSNKISASPPGSRRVSRAPSPISRKSS 802
              +   EP S                    + + N I+  P  + ++S    P+  K S
Sbjct: 725 VENQQTVEPVSSLSNGLPRWGQVPCPFLFEKYCRENSIALVPLSNNQLSSV--PLCWKHS 782

Query: 803 PACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSR 862
           P  S  M S   + N E  F     T+    +E + LR++   L +  Q    +++   +
Sbjct: 783 PRGSKYMVS--TVVNMEKDF---PDTDKILIEEVERLRSEARSLEKLCQMRSEKIQECQQ 837

Query: 863 KLKETTQIAQEEAEKNKAAQEVIRSLTAQ 891
           KL+ET  +A+EEA K KAA+EVI++L+++
Sbjct: 838 KLQETWSLAREEAAKCKAAKEVIKALSSR 866


>gi|297603248|ref|NP_001053665.2| Os04g0583700 [Oryza sativa Japonica Group]
 gi|255675724|dbj|BAF15579.2| Os04g0583700 [Oryza sativa Japonica Group]
          Length = 1065

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 340/915 (37%), Positives = 490/915 (53%), Gaps = 97/915 (10%)

Query: 12  RDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIP 71
           R  EQA+  LKKG +LLK+G+RGKPKFCPFRLSSDEK L+WY+   EK L L+ VS ++ 
Sbjct: 12  RGVEQAIVALKKGAHLLKFGKRGKPKFCPFRLSSDEKTLVWYSKDREKHLSLNSVSTVVL 71

Query: 72  GQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDNRCKSRS 131
           GQ+T                           IC+D+D+AE WF  L AL S        +
Sbjct: 72  GQKT---------------------------ICRDRDQAECWFLGLTALTSSPYSPLPLA 104

Query: 132 DSIS-------SDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKA 184
            S S       + SPRS+ Q+        +S+ L   D+     +  +Y  SP+ +  K 
Sbjct: 105 GSKSGRQINSCAISPRSYLQRKC-----RLSAAL---DTPRHTQVYPSY-GSPKIQ-KKI 154

Query: 185 FSEVLSFTAAAKAYTR----------AESVSKSLNFVASGGLDDANSRSSTADSFRISLS 234
           F   L  ++ A  Y R           E ++  +      GL D    +  A +   +  
Sbjct: 155 FGGNLD-SSEALFYPRHPTSCDIDSYIEKLNPKIATPVKHGLKDIMVANRRAQNITHTPK 213

Query: 235 SAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTV 294
                  + +C    D L DVF+WG  LG+ +LG      +I  +      LP+++ S  
Sbjct: 214 LKTFEGPRVACR--LDSLKDVFLWGSVLGS-MLGSE----DIPKS------LPRLVGSAK 260

Query: 295 VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA 354
           +LD QSIACG  HA ++TKQG++++WG  S G+L   V  + S PK++++L   ++  VA
Sbjct: 261 MLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVA 320

Query: 355 CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G  HTCA+T+SG+L+ WG+G H+LGL+      + W P K  G M+ + +S I CG WH
Sbjct: 321 FGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWH 380

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           TA ITS+G+LFT+GDGTFG LGHGD    + P+EVE+LK  +    +CG WHTAAIVEV 
Sbjct: 381 TAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPWHTAAIVEVM 440

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
               G+    S KLFTWGD   G+LGH D + +++P CV         +V+CG ++T+ L
Sbjct: 441 SSFKGN--APSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVVL 498

Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
           T TG VF++GS+ +GQLG+P + G+    +EG +K  ++ +I+ GS H+AV++   +V+T
Sbjct: 499 TVTGMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFT 558

Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSG 654
           WGKGA GQLG GD  N+ +PTLVEAL  + V+SVVCG NFTAAICLHK +S+ D S+CS 
Sbjct: 559 WGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFNFTAAICLHKTMSMKDQSVCSS 618

Query: 655 CRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESG 714
           C+  F F R+ HNCYNCG ++C  C+S K    ALAP+ N+ YRVCD CF +L    +S 
Sbjct: 619 CQMVFGFTRKEHNCYNCGSMFCSSCTSNKITMAALAPDTNRRYRVCDACFYQLQKVVDSS 678

Query: 715 SNSQIPRNSSG----------------LFQNCKRVTEKENMNSRSATDGQSKPKGKSYHA 758
            +    + S G                LF+      EK  M S   T+ +++    +   
Sbjct: 679 KDKSRLKISKGEMFKLELKAYTPKLSRLFKEANFFAEK--MASVQGTNQRNEEPATAVQT 736

Query: 759 SPSLNGKFQWEPNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPAC--SITMNSFTDLA 816
                G  Q E  + FI +     + P S     A S   R    A   S     FTD  
Sbjct: 737 KTERWG--QVECPALFISAQDSFQTQPVSNSEGCAISFSQRMHDSAVLKSGVSLRFTDAQ 794

Query: 817 NSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAE 876
             E+     +        +   L +Q+  LT + Q   V ++   +KL +T  + ++EA 
Sbjct: 795 REEI-----EMMQTELQGQVKQLHSQVAVLTEQCQQKSVMVQLYKQKLDDTWLVVRDEAA 849

Query: 877 KNKAAQEVIRSLTAQ 891
           + KAA+++I+ LT Q
Sbjct: 850 RCKAAKDIIKVLTDQ 864


>gi|38346811|emb|CAD41378.2| OSJNBa0088A01.18 [Oryza sativa Japonica Group]
 gi|125591414|gb|EAZ31764.1| hypothetical protein OsJ_15916 [Oryza sativa Japonica Group]
          Length = 1041

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 340/915 (37%), Positives = 490/915 (53%), Gaps = 97/915 (10%)

Query: 12  RDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIP 71
           R  EQA+  LKKG +LLK+G+RGKPKFCPFRLSSDEK L+WY+   EK L L+ VS ++ 
Sbjct: 12  RGVEQAIVALKKGAHLLKFGKRGKPKFCPFRLSSDEKTLVWYSKDREKHLSLNSVSTVVL 71

Query: 72  GQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDNRCKSRS 131
           GQ+T                           IC+D+D+AE WF  L AL S        +
Sbjct: 72  GQKT---------------------------ICRDRDQAECWFLGLTALTSSPYSPLPLA 104

Query: 132 DSIS-------SDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKA 184
            S S       + SPRS+ Q+        +S+ L   D+     +  +Y  SP+ +  K 
Sbjct: 105 GSKSGRQINSCAISPRSYLQRKC-----RLSAAL---DTPRHTQVYPSY-GSPKIQ-KKI 154

Query: 185 FSEVLSFTAAAKAYTR----------AESVSKSLNFVASGGLDDANSRSSTADSFRISLS 234
           F   L  ++ A  Y R           E ++  +      GL D    +  A +   +  
Sbjct: 155 FGGNLD-SSEALFYPRHPTSCDIDSYIEKLNPKIATPVKHGLKDIMVANRRAQNITHTPK 213

Query: 235 SAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTV 294
                  + +C    D L DVF+WG  LG+ +LG      +I  +      LP+++ S  
Sbjct: 214 LKTFEGPRVACR--LDSLKDVFLWGSVLGS-MLGSE----DIPKS------LPRLVGSAK 260

Query: 295 VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA 354
           +LD QSIACG  HA ++TKQG++++WG  S G+L   V  + S PK++++L   ++  VA
Sbjct: 261 MLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLASVHVKAVA 320

Query: 355 CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G  HTCA+T+SG+L+ WG+G H+LGL+      + W P K  G M+ + +S I CG WH
Sbjct: 321 FGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDNISVSKIACGEWH 380

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           TA ITS+G+LFT+GDGTFG LGHGD    + P+EVE+LK  +    +CG WHTAAIVEV 
Sbjct: 381 TAIITSSGQLFTYGDGTFGVLGHGDTQGVARPKEVESLKGSRVKSVACGPWHTAAIVEVM 440

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
               G+    S KLFTWGD   G+LGH D + +++P CV         +V+CG ++T+ L
Sbjct: 441 SSFKGN--APSGKLFTWGDADRGKLGHADRKMKLLPTCVDSLTAYDLIQVSCGTAVTVVL 498

Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
           T TG VF++GS+ +GQLG+P + G+    +EG +K  ++ +I+ GS H+AV++   +V+T
Sbjct: 499 TVTGMVFTIGSSRHGQLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFT 558

Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSG 654
           WGKGA GQLG GD  N+ +PTLVEAL  + V+SVVCG NFTAAICLHK +S+ D S+CS 
Sbjct: 559 WGKGAEGQLGLGDYSNRSSPTLVEALEGRDVESVVCGFNFTAAICLHKTMSMKDQSVCSS 618

Query: 655 CRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESG 714
           C+  F F R+ HNCYNCG ++C  C+S K    ALAP+ N+ YRVCD CF +L    +S 
Sbjct: 619 CQMVFGFTRKEHNCYNCGSMFCSSCTSNKITMAALAPDTNRRYRVCDACFYQLQKVVDSS 678

Query: 715 SNSQIPRNSSG----------------LFQNCKRVTEKENMNSRSATDGQSKPKGKSYHA 758
            +    + S G                LF+      EK  M S   T+ +++    +   
Sbjct: 679 KDKSRLKISKGEMFKLELKAYTPKLSRLFKEANFFAEK--MASVQGTNQRNEEPATAVQT 736

Query: 759 SPSLNGKFQWEPNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPAC--SITMNSFTDLA 816
                G  Q E  + FI +     + P S     A S   R    A   S     FTD  
Sbjct: 737 KTERWG--QVECPALFISAQDSFQTQPVSNSEGCAISFSQRMHDSAVLKSGVSLRFTDAQ 794

Query: 817 NSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAE 876
             E+     +        +   L +Q+  LT + Q   V ++   +KL +T  + ++EA 
Sbjct: 795 REEI-----EMMQTELQGQVKQLHSQVAVLTEQCQQKSVMVQLYKQKLDDTWLVVRDEAA 849

Query: 877 KNKAAQEVIRSLTAQ 891
           + KAA+++I+ LT Q
Sbjct: 850 RCKAAKDIIKVLTDQ 864


>gi|222623461|gb|EEE57593.1| hypothetical protein OsJ_07959 [Oryza sativa Japonica Group]
          Length = 976

 Score =  547 bits (1410), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 333/914 (36%), Positives = 476/914 (52%), Gaps = 136/914 (14%)

Query: 3   SFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLK 62
           SF+      R  EQA+  LKKG +LLK G+RGKPK CPFRLSSDEK+L+WY+   EK+L 
Sbjct: 4   SFEGRSPAARGVEQALVALKKGAHLLKCGKRGKPKLCPFRLSSDEKMLMWYSKDREKRLN 63

Query: 63  LSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALIS 122
           LS VS ++ G +T V   Y  P        L+ +N    ++  + D +E +F        
Sbjct: 64  LSSVSSVVLGHKT-VHSIYGSPR-------LMQKN----VLQSNLDFSEPFF-------- 103

Query: 123 EDNRCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLG 182
                          SPR  T  +   ++  ++ D+ N+     + I VA          
Sbjct: 104 ---------------SPRQRTWSDLDYYMEKVTPDVVNRVKHSCRDIKVA---------D 139

Query: 183 KAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQ 242
           K   ++++     K               +S GL  A   +S  D F             
Sbjct: 140 KLNEQIITQLPKQK---------------SSEGLHVAYGATSLKDIF------------- 171

Query: 243 GSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIA 302
                         +WGE  GN L  G V+   +S        LP++L +T ++D QS+A
Sbjct: 172 --------------VWGEVPGNVLDHGDVSKANVS--------LPRLLNTTHIIDVQSVA 209

Query: 303 CGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCA 362
           CG KHA +VTKQG++FSWG  +GG+LGH V   VS PK+I++L  + +  +A G  HTCA
Sbjct: 210 CGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHTCA 269

Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
           V++SG+LY WG+G H LGL G   + S W P K+ G ++G+ I  I CG WHTA I+SAG
Sbjct: 270 VSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAG 329

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           +LF +GDGTFG LGHGD  + + P++VE+LK ++    +CG WHTAAIVE  G T  SN 
Sbjct: 330 QLFAYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERMG-TVKSNA 388

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S KLFTWGD   G+LGH D + ++VP CV+  +D  F +V+C  + TI LT TG VF+
Sbjct: 389 -PSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVVFT 447

Query: 543 MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
           +GS ++G+LG+P S       IEG +K  ++ +I+ GS HIAV++   +V+TWGKG  GQ
Sbjct: 448 IGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTEGQ 507

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFR 662
           LG GD  ++  PTLVEAL DKQV S+ CG NFT AICLH+ +S  D S+CS C+  F F 
Sbjct: 508 LGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAICLHRPLSSKDQSVCSNCQLTFGFT 567

Query: 663 RRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSES--------- 713
           R++HNCYNCG ++C  CS+ K  + ALAP+ +K YRVCD CF ++    E          
Sbjct: 568 RKKHNCYNCGSMFCNSCSNNKVSRAALAPDRSKRYRVCDACFSQMQKVEEHRKLDPQQKI 627

Query: 714 GSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWE---- 769
             +   P           R+ ++ N         QS  +     A P      +W     
Sbjct: 628 QKDEVCPIEIRSYTPKLARIFKEANAIMEKMASAQSPHQRSQNLAVPDHVRTLRWGLVEC 687

Query: 770 -----------PNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANS 818
                      P    +    +S S       + AP P S     A     +S  +L   
Sbjct: 688 PSQFRCVRESIPYCSTLNKQTVSGSIVRVMNETMAPKPASSLLKSA----NDSKAELDLM 743

Query: 819 E-VIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEK 877
           E ++ E  KQ           L+ Q+  L ++ +   ++++   RK++ET  IA++EA K
Sbjct: 744 ENILLEEVKQ-----------LQEQVTTLAKQCRQRSLKVQLYKRKVEETWLIAKDEAAK 792

Query: 878 NKAAQEVIRSLTAQ 891
            KAA+++I+ L  Q
Sbjct: 793 CKAAKDIIKVLIDQ 806


>gi|242074110|ref|XP_002446991.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
 gi|241938174|gb|EES11319.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
          Length = 1024

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 331/925 (35%), Positives = 484/925 (52%), Gaps = 117/925 (12%)

Query: 12  RDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIP 71
           R   QA+  LKKG ++LK G+RGKPKFC FRLSSDE  LIWY+   EK L LS VS ++ 
Sbjct: 11  RGVVQAIVALKKGAHILKCGKRGKPKFCAFRLSSDETTLIWYSKGREKHLSLSSVSAVVL 70

Query: 72  GQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDNRCKSRS 131
           GQ+T                           IC D+D+AE W+  LRAL+     C   S
Sbjct: 71  GQKT---------------------------ICSDRDQAEYWYLGLRALLP--TPCSPCS 101

Query: 132 DSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLSF 191
              S  S +  +  N+PS    + S L    S    P  +   +S +N     F    + 
Sbjct: 102 SIGSRSSRQMDSCTNTPSSYVQLKSRLP---SAHGTPRHIQVYSSHRNPKKATFFGGSAD 158

Query: 192 TAAAKAYTRAESVSKSLNFVAS----------GGLDDANSRSSTADSFRISLSSAVSSSS 241
            + A  Y R  + S    ++             GL D    +   +  +I+ +  + +  
Sbjct: 159 CSEALFYPRQRTFSDIDTYLGKLTRKMSNPEIHGLQDIMVGNREKEE-KITQTPKLKTFE 217

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
                   D L DVF WG+  G+           I   D     LP +++ST +LD QSI
Sbjct: 218 GPRAACRLDSLKDVFFWGDAFGS-----------ILDYDDTSKSLPMLVDSTNMLDVQSI 266

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           ACG  HA ++TKQG+++SWG  S G +G+ V   VS PKL++++   ++  VA G  H C
Sbjct: 267 ACGETHAAIITKQGEVYSWGNESSGGIGNQVNIKVSRPKLVESVASLHVKAVAYGSKHAC 326

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           AVT+SG+L+ WG+G H    +GQ+   ++  W P K+   ++G+ +  I CGPWHTA IT
Sbjct: 327 AVTVSGELFEWGEGPH----MGQLDCYANNLWFPHKLFSPLDGISVVKIACGPWHTAIIT 382

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
           S+G+L+T+GDGTFG LGHGD   T+ P+EVE LK  +    +CG WHTAAIVEV      
Sbjct: 383 SSGQLYTYGDGTFGVLGHGDTQGTTRPKEVEYLKGSRVKCVACGPWHTAAIVEVLSDFKS 442

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
           ++  S  KLFTWGD   G+LGH D + +++P CV    D  F +V+CG ++T+ L+ TG 
Sbjct: 443 NSPRS--KLFTWGDADRGKLGHADKKMKLIPTCVDSLTDYDFIQVSCGMALTVVLSITGV 500

Query: 540 VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
           VF++GS+ +GQLG+P + G+    +EG +K  ++  I+ GS H+AV+++  +V+TWGKG 
Sbjct: 501 VFTIGSSMHGQLGNPHADGRTVCAVEGLLKTEFVRHISSGSSHVAVLTTNGKVFTWGKGK 560

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQF 659
            GQLG GD  N+ TPTLV+AL  +QV+S+ CG N+TAA+CLHK +S  D S+CSGC+  F
Sbjct: 561 EGQLGLGDYLNRSTPTLVDALEGRQVESISCGYNYTAAVCLHKIISRKDLSVCSGCKMAF 620

Query: 660 NFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSN--- 716
            F R++HNCY+CG ++C  CSS K  + ALAP+  + YRVCD CF +L    +S      
Sbjct: 621 GFTRKKHNCYHCGSMFCNSCSSNKVARAALAPDKIRRYRVCDGCFSQLLRVVDSAKVKSE 680

Query: 717 -----------------SQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHAS 759
                            S+I R+++   +    V      N   AT  Q+K +       
Sbjct: 681 LKISKGAEIIRSYTPKLSRIFRDANLPVEKVALVQRPNQRNEVPATPVQAKSQRWGQVEC 740

Query: 760 PSLNGKFQWEPNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSE 819
           P+     Q+ P  D  +   IS +   S  VS                 M+  T L +  
Sbjct: 741 PA-----QFLPGEDSFRYQSISKNHMCSASVSE---------------RMHDLTVLKSGR 780

Query: 820 VIFEYSKQTNDN-----------FNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETT 868
            +    +Q ND+             +E   LR+Q+  L  +     +++E   +KL ET 
Sbjct: 781 SL----QQPNDDQRKDLNTTETLLTEEVKQLRSQVTLLVEQYHQKALQVELYKQKLDETW 836

Query: 869 QIAQEEAEKNKAAQEVIRSLTAQAR 893
            I ++EA K KAA+++I+ LT Q +
Sbjct: 837 LIVRDEAAKCKAAKDIIKVLTDQCK 861


>gi|297738141|emb|CBI27342.3| unnamed protein product [Vitis vinifera]
          Length = 925

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 342/888 (38%), Positives = 470/888 (52%), Gaps = 147/888 (16%)

Query: 8   ILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVS 67
           +  +R  EQA+  LKKG YLL+ GRRGKPKFCPFRLS+DEK LIWY+G+EEKQL+LS ++
Sbjct: 9   VPFDRAVEQAIVTLKKGAYLLRCGRRGKPKFCPFRLSTDEKFLIWYSGQEEKQLRLSSIT 68

Query: 68  RIIPGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDN 125
           +IIPGQRT  FQR  Q E+E +SFSL+Y N  RSLDLICKDK +A+ WF  L+A+IS   
Sbjct: 69  KIIPGQRTVNFQRQLQEERECRSFSLVYANGERSLDLICKDKAQADSWFLGLKAVIS--- 125

Query: 126 RCK-SRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKA 184
           RC+  R  S   +     T  NSP+       +L               E++P+      
Sbjct: 126 RCQHPRQLSTFRNCVGVQTCFNSPAGYFRRKHNLG------------LLEDTPK------ 167

Query: 185 FSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGS 244
           FS+V S   +          S  L++                        SA S  S  S
Sbjct: 168 FSQVRSLCGSPTQSLSERCFSDGLSY------------------------SADSFYSSES 203

Query: 245 CHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACG 304
              + D L DV IWGEG+  G+LGG V      +  + DALLPK+LEST +LD + I+ G
Sbjct: 204 SVSNNDILRDVMIWGEGIEGGILGGGVYRFGNQNGMQSDALLPKLLESTTMLDVREISLG 263

Query: 305 SKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVT 364
            KHA LVTK G++F WGEGSGG+LGH V  D+  PK++++L G  +  V+CGE+ TCA+T
Sbjct: 264 GKHAALVTKHGEVFCWGEGSGGRLGHKVNMDMGNPKIVESLTGVLVKSVSCGEYQTCALT 323

Query: 365 LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG+LYTWGD    + L+G+  + S WIP ++SG + G  IS++ CG WH A ++++G+L
Sbjct: 324 HSGELYTWGDNGSGIDLVGERRKRSQWIPSRLSGPLNGTSISNVACGEWHMAIVSTSGQL 383

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           FT+GDGTFG LGHG   S S P+EVE+L  L    A+CG WHTAAIVEV       N   
Sbjct: 384 FTYGDGTFGVLGHGKLESISQPKEVESLSGLWVKAAACGPWHTAAIVEVRADRLKFN-TK 442

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
             KLFTWGDG +G+LGHGD E +++P CV    D  F +V+CG  +T+ LT  G V++M 
Sbjct: 443 GGKLFTWGDGDKGRLGHGDQERKLLPTCVAQLVDHDFVQVSCGRMLTVGLTCLGTVYTM- 501

Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
               G+LG        P  +E  +++R +E IACGS   A +                  
Sbjct: 502 ----GRLGDTEDRNS-PAVVE-ELRYRQVESIACGSGFTAAI------------------ 537

Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRR 664
                                             CLHK +S  D S CSGCR  F F R+
Sbjct: 538 ----------------------------------CLHKSISSTDQSACSGCRMAFGFTRK 563

Query: 665 RHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRNSS 724
           +HNCYNCGL++C+ CS+KK +  +LAP   KP+RVCD C+  L     S           
Sbjct: 564 KHNCYNCGLLFCRACSNKKVLNASLAPNKKKPFRVCDPCYTYLQRIKHSS---------- 613

Query: 725 GLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNKISASP 784
                  R+ + EN + R      ++   +SY   P  N   Q E        + +S   
Sbjct: 614 -------RLLKLENHSPRQLL--MTQKTSQSYEKKPFKN---QVENQQTVEPVSSLSNGL 661

Query: 785 PGSRRVSRAPSP-ISRKSSPACSITMNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQL 843
           P   R  + P P +  K     SI +  F D             T+    +E + LR++ 
Sbjct: 662 P---RWGQVPCPFLFEKYCRENSIALKDFPD-------------TDKILIEEVERLRSEA 705

Query: 844 EDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQ 891
             L +  Q    +++   +KL+ET  +A+EEA K KAA+EVI++L+++
Sbjct: 706 RSLEKLCQMRSEKIQECQQKLQETWSLAREEAAKCKAAKEVIKALSSR 753


>gi|357470133|ref|XP_003605351.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355506406|gb|AES87548.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1096

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 252/492 (51%), Positives = 350/492 (71%), Gaps = 14/492 (2%)

Query: 216 LDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVE 275
           L +   R+S  D  R S SS  S+SS GS  +D +  GDV+IWGE   +G          
Sbjct: 23  LANMQPRASAVDVIRFSASSTPSNSSGGSEADDIESKGDVYIWGEVFADGF--------- 73

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
                + D L P++LESTVVLD + I  G+ H  +V+++G++F+WGE SGG+LGHG++ D
Sbjct: 74  ---PSKTDVLTPRLLESTVVLDVRDIVSGTHHLAIVSREGKVFTWGEESGGRLGHGIDKD 130

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRK 395
              P L++  +   + +VACGEFHT AV+   + +TWGDG HN+GLLG  +EISHWIP+ 
Sbjct: 131 FGKPHLVEFPDVVTLDIVACGEFHTSAVSKCDNFFTWGDGTHNVGLLGHGNEISHWIPKS 190

Query: 396 VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
           V+G ++GL++ S+ CG WH+A  TS GKLFTFGDGTFG LGHGD+ S   P+EV+ L  L
Sbjct: 191 VNGFLDGLRVVSVACGSWHSALATSNGKLFTFGDGTFGVLGHGDQESVMYPKEVQLLSGL 250

Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
           KTV  +CGVWHTAAI+EVA + SGSN  SS KLFTWGDG + +LGHG+ +  + P  V  
Sbjct: 251 KTVKVACGVWHTAAIIEVAFQ-SGSNA-SSWKLFTWGDGDKFRLGHGNKDMYLKPTRVSP 308

Query: 516 SDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIED 575
             + +F ++ACGH++T+ALT +G VF+MGS + GQLG+P + GK PT ++  +   +IE+
Sbjct: 309 LIEYNFQQIACGHTMTVALTTSGHVFTMGSTENGQLGNPNAAGKVPTLVQDKLLGEFIEE 368

Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           I+CG++H+A V+S+SE+YTWGKG+NG+LGHGD +++++PTLV AL+D+ +K++ CGSNFT
Sbjct: 369 ISCGAHHVAAVTSRSELYTWGKGSNGRLGHGDTDDRKSPTLVLALKDRHLKNISCGSNFT 428

Query: 636 AAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINK 695
           + +C  K VS  D S+C GCR  F   R RHNC NCGLV+C  CSSKK++K A+AP ++K
Sbjct: 429 SCVCNQKYVSGTDQSVCFGCRQPFGLTRIRHNCNNCGLVFCHNCSSKKAIKAAMAPTLDK 488

Query: 696 PYRVCDDCFIKL 707
           P+RVCD C+ KL
Sbjct: 489 PHRVCDTCYTKL 500


>gi|41052709|dbj|BAD07566.1| putative ZR1 protein [Oryza sativa Japonica Group]
 gi|50251941|dbj|BAD27877.1| putative ZR1 protein [Oryza sativa Japonica Group]
          Length = 978

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 333/916 (36%), Positives = 476/916 (51%), Gaps = 138/916 (15%)

Query: 3   SFQQNILVERDTEQ--AVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ 60
           SF+      R  EQ  A+  LKKG +LLK G+RGKPK CPFRLSSDEK+L+WY+   EK+
Sbjct: 4   SFEGRSPAARGVEQDIALVALKKGAHLLKCGKRGKPKLCPFRLSSDEKMLMWYSKDREKR 63

Query: 61  LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRAL 120
           L LS VS ++ G +T V   Y  P        L+ +N    ++  + D +E +F      
Sbjct: 64  LNLSSVSSVVLGHKT-VHSIYGSPR-------LMQKN----VLQSNLDFSEPFF------ 105

Query: 121 ISEDNRCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNR 180
                            SPR  T  +   ++  ++ D+ N+     + I VA        
Sbjct: 106 -----------------SPRQRTWSDLDYYMEKVTPDVVNRVKHSCRDIKVA-------- 140

Query: 181 LGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSS 240
             K   ++++     K               +S GL  A   +S  D F           
Sbjct: 141 -DKLNEQIITQLPKQK---------------SSEGLHVAYGATSLKDIF----------- 173

Query: 241 SQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQS 300
                           +WGE  GN L  G V+   +S        LP++L +T ++D QS
Sbjct: 174 ----------------VWGEVPGNVLDHGDVSKANVS--------LPRLLNTTHIIDVQS 209

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           +ACG KHA +VTKQG++FSWG  +GG+LGH V   VS PK+I++L  + +  +A G  HT
Sbjct: 210 VACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRVKAIAFGAKHT 269

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           CAV++SG+LY WG+G H LGL G   + S W P K+ G ++G+ I  I CG WHTA I+S
Sbjct: 270 CAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISS 329

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           AG+LF +GDGTFG LGHGD  + + P++VE+LK ++    +CG WHTAAIVE  G T  S
Sbjct: 330 AGQLFAYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAIVERMG-TVKS 388

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
           N   S KLFTWGD   G+LGH D + ++VP CV+  +D  F +V+C  + TI LT TG V
Sbjct: 389 NA-PSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQTIVLTITGVV 447

Query: 541 FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
           F++GS ++G+LG+P S       IEG +K  ++ +I+ GS HIAV++   +V+TWGKG  
Sbjct: 448 FTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNGKVFTWGKGTE 507

Query: 601 GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFN 660
           GQLG GD  ++  PTLVEAL DKQV S+ CG NFT AICLH+ +S  D S+CS C+  F 
Sbjct: 508 GQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAICLHRPLSSKDQSVCSNCQLTFG 567

Query: 661 FRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSES------- 713
           F R++HNCYNCG ++C  CS+ K  + ALAP+ +K YRVCD CF ++    E        
Sbjct: 568 FTRKKHNCYNCGSMFCNSCSNNKVSRAALAPDRSKRYRVCDACFSQMQKVEEHRKLDPQQ 627

Query: 714 --GSNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWE-- 769
               +   P           R+ ++ N         QS  +     A P      +W   
Sbjct: 628 KIQKDEVCPIEIRSYTPKLARIFKEANAIMEKMASAQSPHQRSQNLAVPDHVRTLRWGLV 687

Query: 770 -------------PNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLA 816
                        P    +    +S S       + AP P S     A     +S  +L 
Sbjct: 688 ECPSQFRCVRESIPYCSTLNKQTVSGSIVRVMNETMAPKPASSLLKSA----NDSKAELD 743

Query: 817 NSE-VIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEA 875
             E ++ E  KQ           L+ Q+  L ++ +   ++++   RK++ET  IA++EA
Sbjct: 744 LMENILLEEVKQ-----------LQEQVTTLAKQCRQRSLKVQLYKRKVEETWLIAKDEA 792

Query: 876 EKNKAAQEVIRSLTAQ 891
            K KAA+++I+ L  Q
Sbjct: 793 AKCKAAKDIIKVLIDQ 808


>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
          Length = 988

 Score =  540 bits (1391), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 333/926 (35%), Positives = 477/926 (51%), Gaps = 148/926 (15%)

Query: 3   SFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSS------------DEKLL 50
           SF+      R  EQA+  LKKG +LLK G+RGKPK CPFRLSS            DEK+L
Sbjct: 4   SFEGRSPAARGVEQALVALKKGAHLLKCGKRGKPKLCPFRLSSAYLLNARNFDEEDEKML 63

Query: 51  IWYAGKEEKQLKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEA 110
           +WY+   EK+L LS VS ++ G +T V   Y  P        L+ +N    ++  + D +
Sbjct: 64  MWYSKDREKRLNLSSVSSVVLGHKT-VHSIYGSPR-------LMQKN----VLQSNLDFS 111

Query: 111 ELWFTALRALISEDNRCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPIL 170
           E +F                       SPR  T  +   ++  ++ D+ N+     + I 
Sbjct: 112 EPFF-----------------------SPRQRTWSDLDYYMEKVTPDVVNRVKHSCRDIK 148

Query: 171 VAYENSPQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFR 230
           VA          K   ++++     K               +S GL  A   +S  D F 
Sbjct: 149 VA---------DKLNEQIITQLPKQK---------------SSEGLHVAYGATSLKDIF- 183

Query: 231 ISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVL 290
                                     +WGE  GN L  G V+   +S        LP++L
Sbjct: 184 --------------------------VWGEVPGNVLDHGDVSKANVS--------LPRLL 209

Query: 291 ESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNI 350
            +T ++D QS+ACG KHA +VTKQG++FSWG  +GG+LGH V   VS PK+I++L  + +
Sbjct: 210 NTTHIIDVQSVACGEKHAAIVTKQGEVFSWGVDNGGRLGHKVSVSVSDPKIIESLASTRV 269

Query: 351 HMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC 410
             +A G  HTCAV++SG+LY WG+G H LGL G   + S W P K+ G ++G+ I  I C
Sbjct: 270 KAIAFGAKHTCAVSISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIAC 329

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
           G WHTA I+SAG++FT+GDGTFG LGHGD  + + P++VE+LK ++    +CG WHTAAI
Sbjct: 330 GHWHTAIISSAGQIFTYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKAIACGPWHTAAI 389

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
           VE  G T  SN   S KLFTWGD   G+LGH D + ++VP CV+  +D  F +V+C  + 
Sbjct: 390 VERMG-TVKSNA-PSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFAQVSCAKAQ 447

Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           TI LT TG VF++GS ++G+LG+P S       IEG +K  ++ +I+ GS HIAV++   
Sbjct: 448 TIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISSGSSHIAVLTMNG 507

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHS 650
           +V+TWGKG  GQLG GD  ++  PTLVEAL DKQV S+ CG NFT AICLH+ +S  D S
Sbjct: 508 KVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAICLHRPLSSKDQS 567

Query: 651 ICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTT 710
           +CS C+  F F R++HNCYNCG ++C  CS+ K  + ALAP+ +K YRVCD CF ++   
Sbjct: 568 VCSNCQLTFGFTRKKHNCYNCGSMFCNSCSNNKVSRAALAPDRSKRYRVCDACFSQMQKV 627

Query: 711 SESG---------SNSQIPRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPS 761
            E            +   P           R+ ++ N         QS  +     A P 
Sbjct: 628 EEHSKLDPQQKIQKDEVCPIEIRSYTPKLARIFKEANAIMEKMASAQSPHQRSQNLAVPD 687

Query: 762 LNGKFQWE---------------PNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACS 806
                +W                P    +    +S S       + AP P S     A  
Sbjct: 688 HVRTLRWGLVECPSQFRCVRESIPYCSTLNKQTVSGSIVRVMNETMAPKPASSLLKSA-- 745

Query: 807 ITMNSFTDLANSE-VIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLK 865
              +S  +L   E ++ E  KQ           L+ Q+  L ++ +   ++++   RK++
Sbjct: 746 --NDSKAELDLMENILLEEVKQ-----------LQEQVTTLAKQCRQRSLKVQLYKRKVE 792

Query: 866 ETTQIAQEEAEKNKAAQEVIRSLTAQ 891
           ET  IA++EA K KAA+++I+ L  Q
Sbjct: 793 ETWLIAKDEAAKCKAAKDIIKVLIDQ 818


>gi|296090337|emb|CBI40156.3| unnamed protein product [Vitis vinifera]
          Length = 905

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 283/475 (59%), Positives = 355/475 (74%), Gaps = 10/475 (2%)

Query: 1   MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ 60
            A F+ +I +      A+  LKKG +LLKYGRRGKPKFCPFRLS+DE +LIW +GKEEK+
Sbjct: 3   FAWFRSSIFILLVKVLAIIALKKGAHLLKYGRRGKPKFCPFRLSNDESVLIWLSGKEEKR 62

Query: 61  LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRAL 120
           LKLSHVSRIIPGQRT +FQRYP+PEKEYQSFSLIY +RSLDLICKDKDEAE+W T L+AL
Sbjct: 63  LKLSHVSRIIPGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWLTGLKAL 122

Query: 121 ISEDNRCKSRSDSIS-----SDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYEN 175
           IS  +  K R++S S     ++SPR+HTQ++SP      S D   KD  D   +   YE+
Sbjct: 123 ISRGHHQKGRTESRSGVSSEANSPRTHTQRSSPLSSPFGSGDSMQKDGVDPLRLHTPYES 182

Query: 176 SPQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSR--SSTADSFRISL 233
            P+  L KA S+V+ +    KA+  +ES   S++ ++SGG D  N R      D+FR+SL
Sbjct: 183 PPKIGLEKALSDVILYAVPPKAFFPSESGCNSVHSLSSGGSDGINGRLKGMGVDAFRVSL 242

Query: 234 SSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLEST 293
           SSAVSSSSQGS H+D D LGDVFIWGEG G+G LGG V  V  SS+ + D+ +PK LES 
Sbjct: 243 SSAVSSSSQGSGHDDGDALGDVFIWGEGTGDGTLGGGVLRVGSSSSVKMDSFVPKPLESA 302

Query: 294 VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMV 353
           V+LD Q+IACG +HA LVTKQG++FSWGE SGG+LGHGV++DVS+PKLIDAL   NI +V
Sbjct: 303 VLLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVSHPKLIDALKNMNIELV 362

Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
           ACGE+H+CAVTLSGDLYTWG G +N GLLG+ +++SHW+P+++ G  EG+ +SSI CGPW
Sbjct: 363 ACGEYHSCAVTLSGDLYTWGGGSYNFGLLGRGNDMSHWVPKRLIGPSEGIHVSSISCGPW 422

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTA 468
           HTA +TSAG+LFTFGDGTFG LGHGD  S  +PREVE+LK L+T +     W T+
Sbjct: 423 HTAVVTSAGQLFTFGDGTFGVLGHGDCRSVPIPREVESLKGLRTQLL---FWETS 474



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 178/481 (37%), Positives = 251/481 (52%), Gaps = 69/481 (14%)

Query: 445 VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA 504
           VP+ +E+   L     +CG  H AA+V   G+           +F+WG+ + G+LGHG  
Sbjct: 295 VPKPLESAVLLDVQNIACGGRH-AALVTKQGE-----------VFSWGEESGGRLGHGVD 342

Query: 505 EPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG--SADYGQLGSPGSTGKF-P 561
                P  +    +++   VACG   + A+T +G +++ G  S ++G LG       + P
Sbjct: 343 SDVSHPKLIDALKNMNIELVACGEYHSCAVTLSGDLYTWGGGSYNFGLLGRGNDMSHWVP 402

Query: 562 TRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALR 621
            R+ G  +  ++  I+CG +H AVV+S  +++T+G G  G LGHGD  +   P  VE+L 
Sbjct: 403 KRLIGPSEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDCRSVPIPREVESL- 461

Query: 622 DKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSS 681
            K +++ +     +   CL                       +RHNCYNCGLV+C  CSS
Sbjct: 462 -KGLRTQLLFWETSQKYCL-----------------------KRHNCYNCGLVFCHSCSS 497

Query: 682 KKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRNSSG-LFQNCKRVTEK-ENM 739
           KKS+KT++AP  NKPYRVCD+CF KL   +E+ S+S    +  G + Q    + EK E +
Sbjct: 498 KKSLKTSMAPNPNKPYRVCDNCFSKLRKATETDSSSHSSLSRRGSMNQGLNELAEKDEKL 557

Query: 740 NSRS---------------ATDGQSKPKGK----SYHASPSLNGKFQWEP-------NSD 773
           +SRS                  G S+   K    S   SP  NG  QW         N  
Sbjct: 558 DSRSHVQLGKYSSMQSFKQVESGTSRRNKKLEFNSSRVSPLPNGASQWSATNNSKSFNPA 617

Query: 774 FIKSNK-ISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQTNDNF 832
           F  S K ISAS PGSR  SRA SP SR+SSP    T         S  I   +K TNDN 
Sbjct: 618 FPPSKKFISASVPGSRIASRATSPTSRQSSPPRPATPTPILAGLTSSKIVVDAKSTNDNL 677

Query: 833 NQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQA 892
           +QE   LRAQ+E+LTRK+Q  +VELERT+++LK+   +A EE+ K KAA+EVI+SLTAQ 
Sbjct: 678 SQEVLKLRAQVENLTRKAQLQDVELERTAKQLKDAIAVAGEESAKCKAAKEVIKSLTAQL 737

Query: 893 R 893
           +
Sbjct: 738 K 738


>gi|224085093|ref|XP_002307488.1| predicted protein [Populus trichocarpa]
 gi|222856937|gb|EEE94484.1| predicted protein [Populus trichocarpa]
          Length = 1061

 Score =  517 bits (1332), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 275/616 (44%), Positives = 395/616 (64%), Gaps = 48/616 (7%)

Query: 315 GQIFSWGE-------GSGGKLGH-GVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
           G ++ WGE       G+     +    ADV  P+ +++    ++H +ACG  H   VT  
Sbjct: 237 GDVYIWGEVLCSVKVGADKNTSYLSTRADVLLPRPLESNVVLDVHHIACGVRHAAMVTRQ 296

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIP-RKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
           G+++TWG+   + G LG  +      P  ++SG +EGLQ++S+ CGPWHTA +TS G+LF
Sbjct: 297 GEVFTWGE--ESGGRLGHGAGKDVIQPCLRISGPLEGLQVASVTCGPWHTALVTSMGQLF 354

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
           TFGDGTFG LGHG+R + + PREVE+L  L+T+  +CGVWHTAA+VEV   T  S+  SS
Sbjct: 355 TFGDGTFGVLGHGNRENVAYPREVESLAGLRTIAVACGVWHTAAVVEVI-VTQSSSSASS 413

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
            KLFTWGDG + +LGHGD EPR+ P CV    D +F K+ACGHS+T+ LT  G VF+MGS
Sbjct: 414 GKLFTWGDGDKNRLGHGDKEPRLEPTCVPALIDYNFHKIACGHSLTVGLTTAGHVFTMGS 473

Query: 546 ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
             YGQLG+P + GK P  +E  +    +E+IACG+YH+A ++S++EVYTWGKGANG+LGH
Sbjct: 474 TVYGQLGNPCADGKVPCLVEDKLYGESVEEIACGAYHVAALTSRNEVYTWGKGANGRLGH 533

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRR 665
           GD E+++TPT+VEAL+D+ VK + CG+N++AAIC HK VS ++ S CS CR  F F R+R
Sbjct: 534 GDGEDRKTPTIVEALKDRHVKYIACGANYSAAICFHKWVSGSEQSQCSSCRQAFGFTRKR 593

Query: 666 HNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRNSSG 725
           HNCYNCGLV+C  CSS+K+ + ALAP  +KPYRVCD CF+KLN  SE  + ++  RN+  
Sbjct: 594 HNCYNCGLVHCHSCSSRKATRAALAPNPSKPYRVCDSCFVKLNKMSEPSNTNR--RNAGP 651

Query: 726 LF--QNCKRV----------TEKENMNSRSATDGQSKPKGKSYHA--------SPSLNGK 765
               +N  R+          T   N++     D ++  +GK            +PSL   
Sbjct: 652 RLSGENKDRLDKADLRLSKSTPPSNLDLIKQLDSKAAKQGKKADTFSLVRSSQAPSL--- 708

Query: 766 FQWEPNSDFIKSNKISASPPGSRRV-------SRAPSPISRKSSPACSIT-MNSFTDLAN 817
            Q +   D + S+ I   P  S+ V       SR+ SP SR+ SP  S T + + + L+ 
Sbjct: 709 LQLK---DVVLSSAIDLRPKVSKPVLTPSGVSSRSVSPFSRRPSPPRSATPVPTMSGLSF 765

Query: 818 SEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEK 877
           ++ I +  K+TN+  NQE   LR Q+E L ++ +F E+EL+++++K++E   +A EE+ K
Sbjct: 766 TKSIADSLKKTNELLNQEALKLRTQVESLRQRCEFQELELQKSAKKIQEAMAVAAEESAK 825

Query: 878 NKAAQEVIRSLTAQAR 893
           +KAA++VI+SLTAQ +
Sbjct: 826 SKAAKDVIKSLTAQLK 841


>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
           [Brachypodium distachyon]
          Length = 940

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 272/669 (40%), Positives = 395/669 (59%), Gaps = 66/669 (9%)

Query: 250 DGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAV 309
           D L D+F+WG+     +LG  ++  + S A+     LP++L ST +LD Q+++CG KHA 
Sbjct: 165 DSLKDIFVWGD-----VLGSVLDDRDTSKAN---VSLPRLLNSTQILDVQNVSCGEKHAA 216

Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
           +VTKQG++FSWG+  GG+LGH V   V +PK+I++L  +++  +A G  HTCA+ +SG+L
Sbjct: 217 IVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAIAFGAKHTCALAISGEL 276

Query: 370 YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
           + WG+G H+LG+     + S W P K+ G +EG+ +  + CG WHTA I+S+G+LFT+GD
Sbjct: 277 FEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQWHTAIISSSGQLFTYGD 336

Query: 430 GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
           GTFG LGHGD SS + P+EVE+LK L+    +CG WHTAAIVE+ G T  SN   S KLF
Sbjct: 337 GTFGVLGHGDTSSVARPKEVESLKGLRVKAVACGPWHTAAIVEILG-TVKSNA-PSGKLF 394

Query: 490 TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
           TWGD   G+LGH D E ++VP CVK   D  F +V+C  ++T+ALT TG VF++GS ++G
Sbjct: 395 TWGDADRGKLGHSDKESKLVPTCVKALTDSDFAQVSCAKALTVALTITGVVFTIGSKEHG 454

Query: 550 QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           QLGS          +EG +K  ++ +I+ GS H+AV++   +V+TWGKG  GQLG G+  
Sbjct: 455 QLGSHRLDDSSICSVEGPLKTEFVREISSGSSHVAVLTMNGKVFTWGKGTEGQLGLGNYV 514

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCY 669
           ++ +PTLVEAL DKQV S+ CGSNFT A+CLH+ +S  D S+CS CR  F+F R++HNCY
Sbjct: 515 DRSSPTLVEALEDKQVDSIACGSNFTVAVCLHRSISGKDQSVCSRCRLSFSFARKKHNCY 574

Query: 670 NCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQ---------IP 720
           NCG ++C  CS+ K  + AL P+ NK YRVCD CF +L    E G+ S           P
Sbjct: 575 NCGSMFCNSCSNNKVSRAALGPDRNKRYRVCDACFTQLQKNEECGTVSSRLTIEKEEAFP 634

Query: 721 RNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNKI 780
                      R+ ++ N    S  +  +  +G  YH           + N D       
Sbjct: 635 TEIRAYTPKLSRIFKEAN----SIMEKMALAQG--YH-----------QRNQDL------ 671

Query: 781 SASPPGSRRVSR-----APSPI--SRKSSPACSITMNSFTDLANSEVIFEYSKQTNDNFN 833
             + P   R+ R      PS    +R S P CS +     D    E +   S Q+  +  
Sbjct: 672 --AAPDQLRIQRWGQVECPSQFRCARNSIPCCSTSKEQTVD----ESVPAKSAQSASSLK 725

Query: 834 QEPDV-----------LRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQ 882
            E D            L+A +  LT + ++  ++++   +K++ET  I ++EA K KAA+
Sbjct: 726 AELDSTEKILLEEVKQLQAHVTTLTEQCRYRSLKVQLCKQKVEETWLIVRDEAAKCKAAK 785

Query: 883 EVIRSLTAQ 891
           E+I+ LT Q
Sbjct: 786 EIIKVLTNQ 794


>gi|296083842|emb|CBI24230.3| unnamed protein product [Vitis vinifera]
          Length = 953

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 258/540 (47%), Positives = 347/540 (64%), Gaps = 49/540 (9%)

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
           L + +I CG  H A +T  G++F++G+ + G LGHG  S    P+ +++L      + +C
Sbjct: 244 LDVQNIACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDSLSNTNIELVAC 303

Query: 463 GVWHTAAIV-----------------EVAGKTSGSNGL----SSKKLFTWGDGAEGQLGH 501
           G +HT A+                  +  GK S S       SS KLFTWGDG +G+LGH
Sbjct: 304 GEYHTCAVTLSGDLYTWGDGTYNFVFQNPGKWSPSRATALNCSSGKLFTWGDGDKGRLGH 363

Query: 502 GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFP 561
           GD E ++VP CV    D +FC+VACGHS+T+ALT +G V++MGS  YGQLG+P + GK P
Sbjct: 364 GDKEAKLVPTCVAALVDPNFCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLP 423

Query: 562 TRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALR 621
           TR+EG +   ++E+IACG+YH+AV++S++EVYTWGKGANG+LGHGD +++ +PTLVEAL+
Sbjct: 424 TRVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALK 483

Query: 622 DKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSS 681
           DKQVKS+ CG+NFTA ICLHK VS  D S+CSGCR  FNF+R+RHNCYNCGLV+C  CSS
Sbjct: 484 DKQVKSIACGTNFTATICLHKWVSGVDQSMCSGCRLPFNFKRKRHNCYNCGLVFCHSCSS 543

Query: 682 KKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRNSSGLF-QNCKRVTEK-ENM 739
           KKS+K ++AP  NKPYRVCD+CF KL    E+ ++SQ   +  G+  Q    + +K E +
Sbjct: 544 KKSLKASMAPNPNKPYRVCDNCFSKLRKAIETDASSQSAVSRRGVTNQGLNELIDKDEKL 603

Query: 740 NSRS---------------ATDGQSKPKGK----SYHASPSLNGKFQW-----EPNSDFI 775
           +SRS               A    SK   K    S   SP  NG  QW       N  F 
Sbjct: 604 DSRSRVQLARFSSMESLKQAESRTSKRNKKLEFNSSRVSPIPNGGSQWGGALKSLNPVFG 663

Query: 776 KSNK-ISASPPGSRRVSRAPSPISRKSSPACSITMN-SFTDLANSEVIFEYSKQTNDNFN 833
            S K  SAS PGSR VSR  SPISR+ SP  + T   +   L + +++ + +K+TND+ +
Sbjct: 664 SSKKFFSASVPGSRIVSRTTSPISRRPSPPRAATPTPTLEGLTSPKIVVDDAKRTNDSLS 723

Query: 834 QEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
           QE   LR Q+E+LTRK+Q  EVELERT+++LKE   IA EE  + KAA+EVI+SLTAQ +
Sbjct: 724 QEVIKLRVQVENLTRKAQLQEVELERTTKQLKEAIAIAGEETARCKAAKEVIKSLTAQLK 783



 Score =  348 bits (892), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 208/503 (41%), Positives = 282/503 (56%), Gaps = 55/503 (10%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
            ERDTEQA+  LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++GKEEK LKLSHVSRI
Sbjct: 11  AERDTEQALTALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKLLKLSHVSRI 70

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDN---- 125
           I GQRT +FQRYP+PEKEYQSFSLIY +RSLDLICKDKDEAE+WF+ L+ALIS       
Sbjct: 71  ISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEVWFSGLKALISRGGHHRK 130

Query: 126 -RCKSRSDSISSD--SPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLG 182
            R +SRSD I S+  SPR++T+++SP +    S+D   KD GD   +   YE+ P++ + 
Sbjct: 131 WRTESRSDGIPSEANSPRTYTRRSSPLNSPFGSADSLQKDGGDHLRLHSPYESPPKSVME 190

Query: 183 KAFSEVLSFTAAAKAYTRAESVSKSLN-FVASGGLDDANSRSSTADSFRISLSSAVSSSS 241
           KAFS+V+ +    K +  ++S S S++ F   G        S    +   ++   V + +
Sbjct: 191 KAFSDVILYAVPPKGFFPSDSASGSVHSFHRVGSCFGMKMDSLLPKALESAVVLDVQNIA 250

Query: 242 QGSCHEDF-DGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQS 300
            G  H       G++F WGE  G G LG  V+          D L PK+++S    + + 
Sbjct: 251 CGGRHAALVTKQGEIFSWGEESG-GRLGHGVDS---------DVLHPKLIDSLSNTNIEL 300

Query: 301 IACGSKHAVLVT---------------------------------KQGQIFSWGEGSGGK 327
           +ACG  H   VT                                   G++F+WG+G  G+
Sbjct: 301 VACGEYHTCAVTLSGDLYTWGDGTYNFVFQNPGKWSPSRATALNCSSGKLFTWGDGDKGR 360

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG +     P  + AL   N   VACG   T A+T SG +YT G  ++  G LG   +
Sbjct: 361 LGHGDKEAKLVPTCVAALVDPNFCRVACGHSLTVALTTSGHVYTMGSPVY--GQLGN-PQ 417

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPR 447
               +P +V G++    +  I CG +H A +TS  +++T+G G  G LGHGD    + P 
Sbjct: 418 ADGKLPTRVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPT 477

Query: 448 EVETLKELKTVMASCGVWHTAAI 470
            VE LK+ +    +CG   TA I
Sbjct: 478 LVEALKDKQVKSIACGTNFTATI 500



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 5/95 (5%)

Query: 283 DALLPKVLESTVVLD-AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL 341
           D  LP  +E  +     + IACG+ H  ++T + ++++WG+G+ G+LGHG   D + P L
Sbjct: 419 DGKLPTRVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTL 478

Query: 342 IDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           ++AL    +  +ACG   T  +     L+ W  G+
Sbjct: 479 VEALKDKQVKSIACGTNFTATIC----LHKWVSGV 509


>gi|413938284|gb|AFW72835.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 801

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 260/649 (40%), Positives = 374/649 (57%), Gaps = 65/649 (10%)

Query: 269 GAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKL 328
           G V+G  IS        LP++L+S+ +LD QSIACG KHA +VTKQG++FSWGE +GG+L
Sbjct: 5   GHVSGTNIS--------LPRLLKSSQILDVQSIACGEKHAAIVTKQGKVFSWGEENGGRL 56

Query: 329 GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI 388
           GH     VS PK+ID+L  + +  +A G  +TCAV++SG+LY WG+GIH+LG      + 
Sbjct: 57  GHKTSDSVSDPKIIDSLASTPMKTIALGAKYTCAVSVSGELYEWGEGIHSLGFKNNQCQR 116

Query: 389 SHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPRE 448
           S W P K+    +G+ ++ I CG WHTA ++S GKLFT+G GTFG LGHGD  S   P+E
Sbjct: 117 SPWFPHKLIRTSDGISVAKIACGQWHTAIVSSTGKLFTYGHGTFGVLGHGDTRSVVQPKE 176

Query: 449 VETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV 508
           VE+L+ L+    +CG WHTAAIVE +G T  SN     KLFTWG+ +  +LGH D + ++
Sbjct: 177 VESLRGLRVKSVACGPWHTAAIVETSG-TPKSNA-PGGKLFTWGNASGEKLGHTDKKSKL 234

Query: 509 VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNI 568
           VP  V+   D  F +V+CG            VF++GS D+GQLG+P S       +EG +
Sbjct: 235 VPTRVESLIDCDFTQVSCG-----------VVFTIGSKDHGQLGNPRSDSACICMVEGPL 283

Query: 569 KHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSV 628
           K  +++DI+ G+ H+AV++   +V+TWGKG  GQLG GD  ++  PTLVEAL DKQV S+
Sbjct: 284 KTEFVKDISSGNSHVAVLTMNGKVFTWGKGTEGQLGLGDYLDRTFPTLVEALEDKQVDSI 343

Query: 629 VCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTA 688
           VC SNFTA IC+H  +S  D ++CS CR  F F R++HNCYNCG ++C  CSS K  +  
Sbjct: 344 VCSSNFTAVICVHGEISSKD-TVCSSCRLAFRFTRKKHNCYNCGSMFCNSCSSNKVQRAT 402

Query: 689 LAPEINKPYRVCDDCFIKLNTTSESGSNS----------------------QIPRNSSGL 726
           LAP+ +K  RVCD CF +LN T+E G  S                      ++ + ++ +
Sbjct: 403 LAPDKSKRCRVCDACFNELNKTAEHGKMSCESKIQKEPPLTETRTYTPKLSRMLKEANFI 462

Query: 727 FQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNKISASPPG 786
            +    +      N  SAT  Q + +       P      Q++   D I     S   P 
Sbjct: 463 MEKMGSIRSPNQRNQESATLNQMQKQRWGQVECPD-----QFKCARDNISHCLTSKKQPV 517

Query: 787 S-RRVSRAPSPISRKSSPACSITMNSF---TDLANSEVIFEYSKQTNDNFNQEPDVLRAQ 842
              R+ R   P+S+K++   + T +      DL   +++ E  KQ           L+AQ
Sbjct: 518 DIGRIGRMNDPVSQKTAAPLTRTTDKRRKEQDLIE-KIMLEEVKQ-----------LQAQ 565

Query: 843 LEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQ 891
           +  L  + +   ++++   RKL+ET  IA++EA K  AA+E+I+ LT Q
Sbjct: 566 VTTLAEECRHRSLKVQLYKRKLEETWLIARDEATKCNAAKEIIKILTNQ 614


>gi|440577319|emb|CCI55326.1| PH01B001I13.22 [Phyllostachys edulis]
          Length = 1426

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 267/655 (40%), Positives = 386/655 (58%), Gaps = 65/655 (9%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
             D L D+F+WG+ LG+ +LG         S D   AL P+++ ST +LD QSIACG  HA
Sbjct: 451  LDSLKDIFLWGDVLGS-MLG---------SEDLPKAL-PRLVGSTKMLDVQSIACGENHA 499

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
             ++TKQG++FSWG+ S G+LGH V   +S PK++  L   ++ +VA G  HTCAVT+SG+
Sbjct: 500  AIITKQGEVFSWGKESSGRLGHKVNVSLSCPKIVKTLASVHVKVVAFGSKHTCAVTVSGE 559

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            L+ WG+G ++LGLL      + W+P K+ G M+ + +S I CG WH A ITS+G+LFT+G
Sbjct: 560  LFEWGEGANSLGLLNDWYGRNQWVPHKLFGPMDNISVSKIACGEWHMAIITSSGQLFTYG 619

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
            DGTFG LGHGD    + P+EVE+LK L+    +CG WHTAAIVEV   +S      S KL
Sbjct: 620  DGTFGVLGHGDTQGIARPKEVESLKGLRMSSVACGPWHTAAIVEVM--SSFKANAPSGKL 677

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            FTWG+   G+L H D + ++VP CV       F +V+CG ++T+ LT TG VF++GS+ +
Sbjct: 678  FTWGNADRGKLDHADKKMKLVPTCVDSLIVYDFIQVSCGMALTVVLTVTGVVFTVGSSRH 737

Query: 549  GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            GQLG+P   G++   +EG +K  ++ +I+ GS H+AV++   +V+TWGKGA GQLG GD 
Sbjct: 738  GQLGNPQVDGEYICTVEGLLKTEFVREISSGSSHVAVLTMNGKVFTWGKGAEGQLGLGDY 797

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNC 668
             N+ +PTLVEAL  + V+S+ CGS+FTAAICLHK +SI D S+CSGC+  F F R++HNC
Sbjct: 798  VNRSSPTLVEALEGRHVESIACGSSFTAAICLHKAISIKDQSVCSGCQMAFGFTRKKHNC 857

Query: 669  YNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGS-NSQIPRNSSGLF 727
            YNCG ++C  CSS K  K + APE N+ YRVCD CF +L    +S    S++  +   +F
Sbjct: 858  YNCGSMFCNSCSSNKIAKASFAPE-NRRYRVCDVCFCQLQKAVDSSKVKSELKTSKGEMF 916

Query: 728  QNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNKISASPPGS 787
                                  K + KSY  +P L+  F+    ++FI         P  
Sbjct: 917  ----------------------KTEMKSY--TPKLSRIFK---EANFIVEKMALLQGPNQ 949

Query: 788  RRVSRAPSPISRKSS-------PACSIT-MNSFTDLA---NSEVIFEYSKQTNDNFNQEP 836
            R    A +P+  K+        PA  I+  +SF +     N      +S++ +D+     
Sbjct: 950  RNEDSA-TPVQVKTQRWGQVECPAQFISAQDSFQNKPMSKNQMCGISFSQRMHDSV---- 1004

Query: 837  DVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQ 891
             VLR+         +  E ++      L +   + ++EA K K A++VI+ LT Q
Sbjct: 1005 -VLRSGSSLQQSADELKEYDI------LVDVQAVVRDEAAKCKPAKDVIKVLTDQ 1052


>gi|218195863|gb|EEC78290.1| hypothetical protein OsI_18002 [Oryza sativa Indica Group]
          Length = 1012

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 246/606 (40%), Positives = 352/606 (58%), Gaps = 47/606 (7%)

Query: 315 GQIFSWGE---------GSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVT 364
           G ++ WGE         GS         A D+  PK +++    ++  VACG  H   VT
Sbjct: 218 GDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALVT 277

Query: 365 LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG----QME----GLQISSIC-CGPWHT 415
              +++TWG+     G LG  +  S + PR V       +E    GLQ+  +  CG WHT
Sbjct: 278 RQAEVFTWGEECS--GRLGHGAGTSIFQPRLVESLSICNVETLPVGLQVVKLLSCGTWHT 335

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A  TS+GKL+TFGDGTFG LGHG+R + S P+EVE+LK L+T+  SCGVWHTAA+VEV  
Sbjct: 336 ALRTSSGKLYTFGDGTFGVLGHGNRETISYPKEVESLKGLRTISVSCGVWHTAAVVEVIM 395

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             S +   SS KLFTWGDG + +LGHGD   ++ P CV    D +F K  CGH++TI LT
Sbjct: 396 AQSNT---SSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNFHKAVCGHTLTIGLT 452

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
            +G +F+ GS+ YGQLG+P + G++P  +E  +    + ++ CG+YH+AV++   EVYTW
Sbjct: 453 TSGHIFTAGSSVYGQLGNPNNDGRYPRLVEEKLGGGGVVEVVCGAYHVAVLTQSGEVYTW 512

Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGC 655
           GKGANG+LGHGD  +++TPT VEALRD+ VK + CGS FTAAIC HK VS  + S CS C
Sbjct: 513 GKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTAAICQHKSVSGMEQSQCSSC 572

Query: 656 RNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESG- 714
           R  F F R+RHNCYNCGLV+C  CSSKK+++ AL+P   KPYRVCD C++KL+   +SG 
Sbjct: 573 RQPFGFTRKRHNCYNCGLVHCHSCSSKKALRAALSPNPGKPYRVCDSCYLKLSKVLDSGI 632

Query: 715 -----SNSQIPRNSSGLFQNCK--RVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQ 767
                +  +IP +S     + K  RV    + +     D ++  + K Y   P      Q
Sbjct: 633 GHNKNNTPRIPGDSKADKMDSKGNRVASANSSDMIKNLDVKAAKQTKKYDYPPQFPAILQ 692

Query: 768 WEPNSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSITMNSFTDLANSEVIFEYSKQ 827
            + +  FI +              + P+  S  SSP   +   + +  + S   F+  + 
Sbjct: 693 LK-DIPFIGA------------ADQQPND-STYSSPLLRLPNLN-SSSSLSSESFDILRD 737

Query: 828 TNDNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRS 887
            N+   QE   L+ ++  L ++ +  + +L+++  K  E   +A EEA K+KAA++VI+S
Sbjct: 738 ANELLKQEVQKLKEEVNSLRQQREQQDADLQKSEAKAHEAMTLASEEASKSKAAKDVIKS 797

Query: 888 LTAQAR 893
           LTAQ +
Sbjct: 798 LTAQLK 803


>gi|22770461|gb|AAN06607.1| chromosome condensation regulator protein [Cicer arietinum]
          Length = 358

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 169/290 (58%), Positives = 216/290 (74%), Gaps = 4/290 (1%)

Query: 435 LGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG 494
           LGHGDR + S PREVE+L  L+TV  +CGVWHTAAIVEV    S S  +SS KLFTWGDG
Sbjct: 2   LGHGDRENISYPREVESLSGLRTVAGACGVWHTAAIVEVIVAQS-SASISSGKLFTWGDG 60

Query: 495 AEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSP 554
            + +LGHGD + R+ P CV    D +F ++ACGHS+T+ LT +G VF+MGS  YGQLG+P
Sbjct: 61  DKNRLGHGDKDARLEPTCVSALIDYNFHRIACGHSLTVGLTTSGHVFTMGSTVYGQLGNP 120

Query: 555 GSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
            S GK P  +E  +    +E+IACG+YH+ V++SK+EVYTWGKGANG+LGHGD E+++ P
Sbjct: 121 QSDGKLPCLVEDKLAGECVEEIACGAYHVTVLTSKNEVYTWGKGANGRLGHGDIEDRKMP 180

Query: 615 TLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLV 674
           TLVEAL+D+ VK + CGSN++AAICLHK VS A+ S CS CR  F F R+RHNCYNCGLV
Sbjct: 181 TLVEALKDRHVKYIACGSNYSAAICLHKWVSGAEQSQCSTCRQAFGFTRKRHNCYNCGLV 240

Query: 675 YCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQ---IPR 721
           +C  CSS+K+ + ALAP   KPYRVCD C+ KL   +ES +N++   +PR
Sbjct: 241 HCHSCSSRKAFRAALAPNPGKPYRVCDSCYTKLIKIAESSNNNRRNGMPR 290



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 14/206 (6%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK-----------QGQIFSWGEGS 324
           +   DR +   P+ +ES   L   + ACG  H   + +            G++F+WG+G 
Sbjct: 2   LGHGDRENISYPREVESLSGLRTVAGACGVWHTAAIVEVIVAQSSASISSGKLFTWGDGD 61

Query: 325 GGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQ 384
             +LGHG +     P  + AL   N H +ACG   T  +T SG ++T G  ++  G LG 
Sbjct: 62  KNRLGHGDKDARLEPTCVSALIDYNFHRIACGHSLTVGLTTSGHVFTMGSTVY--GQLGN 119

Query: 385 VSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS 444
             +    +P  V  ++ G  +  I CG +H   +TS  +++T+G G  G LGHGD     
Sbjct: 120 -PQSDGKLPCLVEDKLAGECVEEIACGAYHVTVLTSKNEVYTWGKGANGRLGHGDIEDRK 178

Query: 445 VPREVETLKELKTVMASCGVWHTAAI 470
           +P  VE LK+      +CG  ++AAI
Sbjct: 179 MPTLVEALKDRHVKYIACGSNYSAAI 204



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 52/84 (61%), Gaps = 1/84 (1%)

Query: 283 DALLPKVLESTVVLD-AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL 341
           D  LP ++E  +  +  + IACG+ H  ++T + ++++WG+G+ G+LGHG   D   P L
Sbjct: 123 DGKLPCLVEDKLAGECVEEIACGAYHVTVLTSKNEVYTWGKGANGRLGHGDIEDRKMPTL 182

Query: 342 IDALNGSNIHMVACGEFHTCAVTL 365
           ++AL   ++  +ACG  ++ A+ L
Sbjct: 183 VEALKDRHVKYIACGSNYSAAICL 206


>gi|296088111|emb|CBI35500.3| unnamed protein product [Vitis vinifera]
          Length = 910

 Score =  355 bits (910), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 242/606 (39%), Positives = 328/606 (54%), Gaps = 88/606 (14%)

Query: 11  ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRII 70
           ERD EQA+  LKKG  LLKYGR+GKPKFCPFRLS+DE  LIW +   E+ LKL+ VSRII
Sbjct: 11  ERDVEQALIALKKGAQLLKYGRKGKPKFCPFRLSNDESSLIWISSSGERILKLASVSRII 70

Query: 71  PGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALISEDNRCK 128
           PGQRTAVFQRY +PEK+Y SFSLIY N  RSLDLICKDK EAE+W   L+ALIS     +
Sbjct: 71  PGQRTAVFQRYLRPEKDYLSFSLIYNNGKRSLDLICKDKVEAEVWIAGLKALISSGQGGR 130

Query: 129 SRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEV 188
           S+ D  S         K           DLT+    D+        +SP+  +G      
Sbjct: 131 SKIDGWSDGGLYFDDSK-----------DLTSNSPSDSSVSATRDISSPEVSVG------ 173

Query: 189 LSFTAAAKAYTRAESVSKSLNFVASGGLDDAN--SRSSTADSFRISLSSAVSSSSQGSCH 246
            +   +  +Y    SV    + VA   LD  N  ++ S +D+FR+S+SSA S+SS GS  
Sbjct: 174 FNSNTSPNSYRPENSVPPERSHVA---LDHTNMQTKGSGSDAFRVSVSSAPSTSSHGSAP 230

Query: 247 EDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSK 306
           +D D LGDV+IWGE + + L+                    K LES VVLD   IACG +
Sbjct: 231 DDCDALGDVYIWGEVICDNLV--------------------KPLESNVVLDVHHIACGVR 270

Query: 307 HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA------------ 354
           HA LVT+QG+IF+WGE SGG+LGHGV  DV  P+L+++L  +++  VA            
Sbjct: 271 HAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACPLEGLQVASVT 330

Query: 355 CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
           CG +HT  VT +  L+T+GDG    G+LG   + +   PR+V   + GL+  ++ CG WH
Sbjct: 331 CGPWHTALVTTTRQLFTFGDG--TFGVLGHGDKDNVAYPREVE-SLSGLRTIAVACGVWH 387

Query: 415 TAAI-----------TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
           TAA+            S+GKLFT+GDG    LGHGD+     P  V  L E      +CG
Sbjct: 388 TAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQKVACG 447

Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC- 522
              T  +             +S ++ T G    GQLG+  ++ ++   C      +  C 
Sbjct: 448 HSLTVGLT------------TSGQVCTMGSTVYGQLGNPQSDGKLP--CFVEDKLLGECV 493

Query: 523 -KVACGHSITIALTATGQVFSMGSADYGQLGSPG-STGKFPTRIEGNIKHRYIEDIACGS 580
            ++ACG      LT+  +V++ G    G+LG       K PT +E  +K R+++ IACGS
Sbjct: 494 EEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIEDRKTPTLVE-TLKDRHVKYIACGS 552

Query: 581 YHIAVV 586
            + A +
Sbjct: 553 NYTAAI 558



 Score =  352 bits (904), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 173/342 (50%), Positives = 230/342 (67%), Gaps = 24/342 (7%)

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           G ++ WGE     L   +E++V            ++H +ACG  H   VT  G+++TWG+
Sbjct: 237 GDVYIWGEVICDNLVKPLESNVVL----------DVHHIACGVRHAALVTRQGEIFTWGE 286

Query: 375 GIHNLGLLGQVSEISHWIPRKVSG-----------QMEGLQISSICCGPWHTAAITSAGK 423
              + G LG         PR V              +EGLQ++S+ CGPWHTA +T+  +
Sbjct: 287 --ESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACPLEGLQVASVTCGPWHTALVTTTRQ 344

Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
           LFTFGDGTFG LGHGD+ + + PREVE+L  L+T+  +CGVWHTAA+VEV   T  S  +
Sbjct: 345 LFTFGDGTFGVLGHGDKDNVAYPREVESLSGLRTIAVACGVWHTAAVVEVI-VTQSSASV 403

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
           SS KLFTWGDG + +LGHGD EPR+ P CV    + +F KVACGHS+T+ LT +GQV +M
Sbjct: 404 SSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNFQKVACGHSLTVGLTTSGQVCTM 463

Query: 544 GSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           GS  YGQLG+P S GK P  +E  +    +E+IACG+YH+AV++S++EVYTWGKGANG+L
Sbjct: 464 GSTVYGQLGNPQSDGKLPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANGRL 523

Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVS 645
           GHGD E+++TPTLVE L+D+ VK + CGSN+TAAICLHK VS
Sbjct: 524 GHGDIEDRKTPTLVETLKDRHVKYIACGSNYTAAICLHKWVS 565



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/104 (43%), Positives = 71/104 (68%), Gaps = 1/104 (0%)

Query: 791 SRAPSPISRKSSPACSIT-MNSFTDLANSEVIFEYSKQTNDNFNQEPDVLRAQLEDLTRK 849
           SR+ SP SRK SP  S T + + + L+ S+ I +  K+TN+  NQE   LR Q+E L  +
Sbjct: 573 SRSVSPFSRKPSPPRSATPVPTTSGLSFSKSIADSLKKTNELLNQEVLKLRGQVESLRER 632

Query: 850 SQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQAR 893
            +  E+EL+++++K++E   +A EE+ K+KAA+EVI+SLTAQ +
Sbjct: 633 CELQELELQKSAKKVQEAMVVATEESAKSKAAKEVIKSLTAQLK 676



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 51/84 (60%), Gaps = 1/84 (1%)

Query: 283 DALLPKVLESTVVLD-AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL 341
           D  LP  +E  ++ +  + IACG+ H  ++T + ++++WG+G+ G+LGHG   D   P L
Sbjct: 477 DGKLPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIEDRKTPTL 536

Query: 342 IDALNGSNIHMVACGEFHTCAVTL 365
           ++ L   ++  +ACG  +T A+ L
Sbjct: 537 VETLKDRHVKYIACGSNYTAAICL 560


>gi|297733996|emb|CBI15243.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 147/246 (59%), Positives = 189/246 (76%), Gaps = 5/246 (2%)

Query: 16  QAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPGQRT 75
           QA+  LKKGTYLLKYGRRGKP FCPFR+S+DEK+L+WYAG+EEKQL+L  VSRII GQ T
Sbjct: 20  QAITALKKGTYLLKYGRRGKPTFCPFRISNDEKVLLWYAGREEKQLQLCQVSRIIQGQHT 79

Query: 76  AVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDNR----CKSRS 131
           A F++YP+ EKE QSFSL+Y++ SLD+ICKDKDEAE+WF ALRALIS+ N      ++RS
Sbjct: 80  ATFRQYPRLEKEDQSFSLMYKDGSLDIICKDKDEAEVWFVALRALISQCNYHNWINETRS 139

Query: 132 DSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLSF 191
           DS S D   +  ++N+P  VS+ SSD+ +KD  + Q IL+ +++  + RLG+AFS+++S+
Sbjct: 140 DSGSLDH-HTDIRRNTPLTVSANSSDIISKDPENVQTILIPFQHPRKKRLGRAFSDIISY 198

Query: 192 TAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDG 251
           T A K +TR ESV  SL+ ++ GG+DD N  SS  D+F ISLSSAVSS  QGS  EDFD 
Sbjct: 199 TGATKGFTRVESVPSSLSSLSVGGIDDPNGCSSAVDTFHISLSSAVSSPGQGSSREDFDA 258

Query: 252 LGDVFI 257
           LGDVFI
Sbjct: 259 LGDVFI 264


>gi|414590766|tpg|DAA41337.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 521

 Score =  258 bits (659), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 154/389 (39%), Positives = 219/389 (56%), Gaps = 64/389 (16%)

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           KLFTWGDG + +LGHGD EP++ P             +ACGHS+T+ LT + QV SMG+ 
Sbjct: 38  KLFTWGDGDKHRLGHGDKEPKLKPT------------IACGHSLTVGLTTSRQVLSMGNI 85

Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            YGQLG+P S                            V+++KSEV+TWGKGANG+LGHG
Sbjct: 86  VYGQLGNPRSN---------------------------VLTNKSEVFTWGKGANGRLGHG 118

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRH 666
           D E+++ PT+VE+LRD+ ++ + CGSNFT+AIC HK VS A+ S  + CR  F F R+RH
Sbjct: 119 DVEDRKIPTVVESLRDRAIRHIACGSNFTSAICQHKWVSGAEQSQYASCRQPFGFTRKRH 178

Query: 667 NCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQ----IPRN 722
           NC+NCGLV+C +C+S K ++ ALAP   KPYRVCD CF+KLN+ + S + ++    +PR+
Sbjct: 179 NCHNCGLVHCNVCTSHKVLRAALAPNPAKPYRVCDSCFMKLNSATYSSTINKKKEVVPRH 238

Query: 723 SSGLFQNCK--RVTEKENMNSRSATDGQSKPKGK-----SYHASPSLNGKFQWEPNSDFI 775
           S     + K  R     N++   + D ++  +GK     S+  +P ++   Q     D  
Sbjct: 239 SGESNHDAKLARAIVPSNLDMIRSLDSKAAKQGKKTDALSFLRTPQMSSLLQLR---DIT 295

Query: 776 KSNKISASPPGSRRV---------SRAPSPISRKSSPACSITMNSFTD-LANSEVIFEYS 825
            S  I  +    R V         SR  SP SRK SP  S T    T  L+ ++   +  
Sbjct: 296 LSGVIDLNKSVPRAVRTSVRSLNSSRVVSPFSRKPSPPRSTTPVPTTHGLSIAKTAADSL 355

Query: 826 KQTNDNFNQEPDVLRAQLEDLTRKSQFLE 854
            +TN+  +QE + LRAQ E + +KS+  E
Sbjct: 356 AKTNEMLSQEVERLRAQSE-IVKKSKKRE 383



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 62/134 (46%), Gaps = 1/134 (0%)

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           GKLFT+GDG    LGHGD+     P           +  S  V     IV        SN
Sbjct: 37  GKLFTWGDGDKHRLGHGDKEPKLKPTIACGHSLTVGLTTSRQVLSMGNIVYGQLGNPRSN 96

Query: 482 GLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
            L++K ++FTWG GA G+LGHGD E R +P  V+   D +   +ACG + T A+     V
Sbjct: 97  VLTNKSEVFTWGKGANGRLGHGDVEDRKIPTVVESLRDRAIRHIACGSNFTSAICQHKWV 156

Query: 541 FSMGSADYGQLGSP 554
                + Y     P
Sbjct: 157 SGAEQSQYASCRQP 170



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 51/191 (26%)

Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQ------GQIFSWGEGSGGKLGHGVEADVSYPKL 341
           ++L++T+     SI   +   V+VT+       G++F+WG+G   +LGHG +     PKL
Sbjct: 7   RILKNTI---KGSIPSTTAREVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKE----PKL 59

Query: 342 IDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQME 401
                      +ACG   T  +T S  + + G+ ++  G LG         PR       
Sbjct: 60  KPT--------IACGHSLTVGLTTSRQVLSMGNIVY--GQLGN--------PR------- 94

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
                        +  +T+  ++FT+G G  G LGHGD     +P  VE+L++      +
Sbjct: 95  -------------SNVLTNKSEVFTWGKGANGRLGHGDVEDRKIPTVVESLRDRAIRHIA 141

Query: 462 CGVWHTAAIVE 472
           CG   T+AI +
Sbjct: 142 CGSNFTSAICQ 152



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 23/124 (18%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKV----------LESTVVLDAQSIA 302
           G +F WG+G  + L  G          D+   L P +            S  VL   +I 
Sbjct: 37  GKLFTWGDGDKHRLGHG----------DKEPKLKPTIACGHSLTVGLTTSRQVLSMGNIV 86

Query: 303 ---CGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
               G+  + ++T + ++F+WG+G+ G+LGHG   D   P ++++L    I  +ACG   
Sbjct: 87  YGQLGNPRSNVLTNKSEVFTWGKGANGRLGHGDVEDRKIPTVVESLRDRAIRHIACGSNF 146

Query: 360 TCAV 363
           T A+
Sbjct: 147 TSAI 150


>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
           magnipapillata]
          Length = 809

 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 156/467 (33%), Positives = 234/467 (50%), Gaps = 41/467 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           D++ WG     G+LG           +  + L P+V+E+ +  D +++ACG++H + V+ 
Sbjct: 374 DIYTWGAS-PKGVLG---------HGEETEELFPRVVEALLGRDIRTVACGTEHTLAVSV 423

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G++FSWG G GGKLG     D   P  I A    NI  V+C E H+ +VT SG+LYT+G
Sbjct: 424 NGEMFSWGCGRGGKLGLKNILDRYMPLKIGAFENVNITFVSCNELHSASVTESGELYTFG 483

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
               +LG   +  +    +PRKV       +I ++ CG   T A+ S G+L++FG    G
Sbjct: 484 RSGPHLGYTTE--DRKQAVPRKVDFSTAN-KIKAVSCGLEFTIALNSEGELYSFGKNDCG 540

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
            LG G  +    P  ++ L  ++    SCG  H  A+          NG     ++ WG 
Sbjct: 541 QLGAGHFNDIEEPYLIKHLNGVRISKVSCGSKHVGAVT--------VNG----DVWLWGS 588

Query: 494 GAEGQLGHGDAEPRVVPL---CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
              GQLG    E   +P        +++I    + CG S T+ L+ TG V+  G+   GQ
Sbjct: 589 NEFGQLGTDKLEAHDIPFEAPSTFWNEEIQ--DIKCGGSHTVVLSCTGVVYVFGNGQSGQ 646

Query: 551 LG------SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
           LG      SP  T      +  N K   I  + CG  H A V+    +YTWG G+ G+LG
Sbjct: 647 LGVAVNQTSPYITNPCILSMPNNTK---IAKVDCGIEHTAAVTESGCLYTWGNGSRGRLG 703

Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRR 664
           HGD++++  PTLVE+L  KQV+S+ CG+  TAA  +   V   +   C  C+ +F   RR
Sbjct: 704 HGDHQDRYVPTLVESLAYKQVQSIACGAYHTAACVIRAWVHDQETKSCMACKQRFTTVRR 763

Query: 665 RHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTS 711
           RH+C  CG ++C  CS +K     L    ++P RVCD C+  L  ++
Sbjct: 764 RHHCRKCGGIFCGTCSQRKC--PLLEIGYSEPVRVCDRCYFILTEST 808



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 130/509 (25%), Positives = 200/509 (39%), Gaps = 133/509 (26%)

Query: 90  SFSLIYRN----RSLDLICKDKDEAELWFTALRALISE-DN----RCKSRSDSISSDSPR 140
           SFS+IY+     RSLD++CKD+ E ++W   L+ALI+  DN    R  S +D   +D   
Sbjct: 296 SFSVIYKQGNTKRSLDIVCKDRVEYDIWTVGLQALINGFDNLDGLRLMSEADLSKADGKL 355

Query: 141 SHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLSFTAAAKAYTR 200
                     VS        +D+ D    +  +  SP+  LG        F    +A   
Sbjct: 356 MLELGLFGDRVS------VKEDACD----IYTWGASPKGVLGHGEETEELFPRVVEAL-- 403

Query: 201 AESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGE 260
              + + +  VA G          T  +  +S++                  G++F WG 
Sbjct: 404 ---LGRDIRTVACG----------TEHTLAVSVN------------------GEMFSWGC 432

Query: 261 GLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSW 320
           G G  L  G  N +        D  +P  + +   ++   ++C   H+  VT+ G+++++
Sbjct: 433 GRGGKL--GLKNIL--------DRYMPLKIGAFENVNITFVSCNELHSASVTESGELYTF 482

Query: 321 GEGSGGKLGHGVE---------ADVSYPKLIDA--------------------------- 344
           G  SG  LG+  E          D S    I A                           
Sbjct: 483 GR-SGPHLGYTTEDRKQAVPRKVDFSTANKIKAVSCGLEFTIALNSEGELYSFGKNDCGQ 541

Query: 345 -----------------LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
                            LNG  I  V+CG  H  AVT++GD++ WG   +  G LG    
Sbjct: 542 LGAGHFNDIEEPYLIKHLNGVRISKVSCGSKHVGAVTVNGDVWLWGS--NEFGQLGTDKL 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSV- 445
            +H IP +        +I  I CG  HT  ++  G ++ FG+G  G LG   +++S  + 
Sbjct: 600 EAHDIPFEAPSTFWNEEIQDIKCGGSHTVVLSCTGVVYVFGNGQSGQLGVAVNQTSPYIT 659

Query: 446 -PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA 504
            P  +      K     CG+ HTAA+ E            S  L+TWG+G+ G+LGHGD 
Sbjct: 660 NPCILSMPNNTKIAKVDCGIEHTAAVTE------------SGCLYTWGNGSRGRLGHGDH 707

Query: 505 EPRVVPLCVKVSDDISFCKVACGHSITIA 533
           + R VP  V+         +ACG   T A
Sbjct: 708 QDRYVPTLVESLAYKQVQSIACGAYHTAA 736



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 33/56 (58%)

Query: 583 IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           ++V     ++YTWG    G LGHG+   +  P +VEAL  + +++V CG+  T A+
Sbjct: 366 VSVKEDACDIYTWGASPKGVLGHGEETEELFPRVVEALLGRDIRTVACGTEHTLAV 421


>gi|345292925|gb|AEN82954.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292927|gb|AEN82955.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292935|gb|AEN82959.1| AT5G12350-like protein, partial [Capsella rubella]
          Length = 169

 Score =  238 bits (607), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 104/156 (66%), Positives = 133/156 (85%), Gaps = 2/156 (1%)

Query: 318 FSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH 377
           FSWGE S G+LGHGV+++V +PKLIDAL  +NI +VACGE+H+CAV+LSGDLYTWG G  
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKG-- 58

Query: 378 NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH 437
           + G+LG  +E+SHW+P++V+  MEG+ +SSI CGP+HTA +TSAG+LFTFGDGTFG LGH
Sbjct: 59  DFGILGHGNEVSHWVPKRVNFLMEGMHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGH 118

Query: 438 GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           GDR S  +PREV++LK L+TV A+CGVWHTAA+VEV
Sbjct: 119 GDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEV 154



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 1/151 (0%)

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           F+WG+ +EG+LGHG       P  +      +   VACG   + A++ +G +++ G  D+
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDF 60

Query: 549 GQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
           G LG       + P R+   ++  ++  IACG YH AVV+S  +++T+G G  G LGHGD
Sbjct: 61  GILGHGNEVSHWVPKRVNFLMEGMHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 120

Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            ++   P  V++L+  +     CG   TAA+
Sbjct: 121 RKSVFIPREVDSLKGLRTVRAACGVWHTAAV 151



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 16/159 (10%)

Query: 370 YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
           ++WG+   + G LG   + +   P+ +   +    I  + CG +H+ A++ +G L+T+G 
Sbjct: 1   FSWGE--ESEGRLGHGVDSNVQHPKLIDA-LGTTNIELVACGEYHSCAVSLSGDLYTWGK 57

Query: 430 GTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           G FG LGHG+  S  VP+ V  L E   V + +CG +HTA +             S+ +L
Sbjct: 58  GDFGILGHGNEVSHWVPKRVNFLMEGMHVSSIACGPYHTAVVT------------SAGQL 105

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
           FT+GDG  G LGHGD +   +P  V     +   + ACG
Sbjct: 106 FTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACG 144



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 63/112 (56%), Gaps = 11/112 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVV-LDAQSIACGSKHAVLV 311
           GD++ WG+G   G+LG   +G E+S        +PK +   +  +   SIACG  H  +V
Sbjct: 50  GDLYTWGKG-DFGILG---HGNEVSH------WVPKRVNFLMEGMHVSSIACGPYHTAVV 99

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAV 363
           T  GQ+F++G+G+ G LGHG    V  P+ +D+L G      ACG +HT AV
Sbjct: 100 TSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAV 151



 Score = 44.7 bits (104), Expect = 0.24,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 30/48 (62%)

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           ++WG+ + G+LGHG + N Q P L++AL    ++ V CG   + A+ L
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSL 48


>gi|345292929|gb|AEN82956.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292931|gb|AEN82957.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292933|gb|AEN82958.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292937|gb|AEN82960.1| AT5G12350-like protein, partial [Capsella rubella]
 gi|345292939|gb|AEN82961.1| AT5G12350-like protein, partial [Capsella rubella]
          Length = 169

 Score =  238 bits (607), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 104/156 (66%), Positives = 133/156 (85%), Gaps = 2/156 (1%)

Query: 318 FSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH 377
           FSWGE S G+LGHGV+++V +PKLIDAL  +NI +VACGE+H+CAV+LSGDLYTWG G  
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKG-- 58

Query: 378 NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH 437
           + G+LG  +E+SHW+P++V+  MEG+ +SSI CGP+HTA +TSAG+LFTFGDGTFG LGH
Sbjct: 59  DFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGH 118

Query: 438 GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           GDR S  +PREV++LK L+TV A+CGVWHTAA+VEV
Sbjct: 119 GDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEV 154



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 1/151 (0%)

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           F+WG+ +EG+LGHG       P  +      +   VACG   + A++ +G +++ G  D+
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDF 60

Query: 549 GQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
           G LG       + P R+   ++  ++  IACG YH AVV+S  +++T+G G  G LGHGD
Sbjct: 61  GILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 120

Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            ++   P  V++L+  +     CG   TAA+
Sbjct: 121 RKSVFIPREVDSLKGLRTVRAACGVWHTAAV 151



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 16/159 (10%)

Query: 370 YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
           ++WG+   + G LG   + +   P+ +   +    I  + CG +H+ A++ +G L+T+G 
Sbjct: 1   FSWGE--ESEGRLGHGVDSNVQHPKLIDA-LGTTNIELVACGEYHSCAVSLSGDLYTWGK 57

Query: 430 GTFGALGHGDRSSTSVPREVETLKE-LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           G FG LGHG+  S  VP+ V  L E +     +CG +HTA +             S+ +L
Sbjct: 58  GDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVT------------SAGQL 105

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
           FT+GDG  G LGHGD +   +P  V     +   + ACG
Sbjct: 106 FTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACG 144



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 43/112 (38%), Positives = 63/112 (56%), Gaps = 11/112 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVV-LDAQSIACGSKHAVLV 311
           GD++ WG+G   G+LG   +G E+S        +PK +   +  +   SIACG  H  +V
Sbjct: 50  GDLYTWGKG-DFGILG---HGNEVSH------WVPKRVNFLMEGIHVSSIACGPYHTAVV 99

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAV 363
           T  GQ+F++G+G+ G LGHG    V  P+ +D+L G      ACG +HT AV
Sbjct: 100 TSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAV 151



 Score = 44.7 bits (104), Expect = 0.24,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 30/48 (62%)

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           ++WG+ + G+LGHG + N Q P L++AL    ++ V CG   + A+ L
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSL 48


>gi|345292913|gb|AEN82948.1| AT5G12350-like protein, partial [Capsella grandiflora]
 gi|345292917|gb|AEN82950.1| AT5G12350-like protein, partial [Capsella grandiflora]
 gi|345292919|gb|AEN82951.1| AT5G12350-like protein, partial [Capsella grandiflora]
 gi|345292921|gb|AEN82952.1| AT5G12350-like protein, partial [Capsella grandiflora]
 gi|345292923|gb|AEN82953.1| AT5G12350-like protein, partial [Capsella grandiflora]
          Length = 169

 Score =  238 bits (606), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 103/156 (66%), Positives = 133/156 (85%), Gaps = 2/156 (1%)

Query: 318 FSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH 377
           FSWGE S G+LGHGV+++V +PKLIDAL  +NI +VACGE+H+CAV+LSGDLYTWG G  
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKG-- 58

Query: 378 NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH 437
           + G+LG  +E+SHW+P++V+  MEG+ +SSI CGP+HTA +TSAG+LFTFGDGTFG LGH
Sbjct: 59  DFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGH 118

Query: 438 GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           GDR S  +PRE+++LK L+TV A+CGVWHTAA+VEV
Sbjct: 119 GDRKSVFIPREIDSLKGLRTVRAACGVWHTAAVVEV 154



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 49/151 (32%), Positives = 82/151 (54%), Gaps = 1/151 (0%)

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           F+WG+ +EG+LGHG       P  +      +   VACG   + A++ +G +++ G  D+
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSLSGDLYTWGKGDF 60

Query: 549 GQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
           G LG       + P R+   ++  ++  IACG YH AVV+S  +++T+G G  G LGHGD
Sbjct: 61  GILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 120

Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            ++   P  +++L+  +     CG   TAA+
Sbjct: 121 RKSVFIPREIDSLKGLRTVRAACGVWHTAAV 151



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 16/159 (10%)

Query: 370 YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
           ++WG+   + G LG   + +   P+ +   +    I  + CG +H+ A++ +G L+T+G 
Sbjct: 1   FSWGE--ESEGRLGHGVDSNVQHPKLIDA-LGTTNIELVACGEYHSCAVSLSGDLYTWGK 57

Query: 430 GTFGALGHGDRSSTSVPREVETLKE-LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           G FG LGHG+  S  VP+ V  L E +     +CG +HTA +             S+ +L
Sbjct: 58  GDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVT------------SAGQL 105

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
           FT+GDG  G LGHGD +   +P  +     +   + ACG
Sbjct: 106 FTFGDGTFGVLGHGDRKSVFIPREIDSLKGLRTVRAACG 144



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 44/112 (39%), Positives = 63/112 (56%), Gaps = 11/112 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVV-LDAQSIACGSKHAVLV 311
           GD++ WG+G   G+LG   +G E+S        +PK +   +  +   SIACG  H  +V
Sbjct: 50  GDLYTWGKG-DFGILG---HGNEVSH------WVPKRVNFLMEGIHVSSIACGPYHTAVV 99

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAV 363
           T  GQ+F++G+G+ G LGHG    V  P+ ID+L G      ACG +HT AV
Sbjct: 100 TSAGQLFTFGDGTFGVLGHGDRKSVFIPREIDSLKGLRTVRAACGVWHTAAV 151



 Score = 44.7 bits (104), Expect = 0.24,   Method: Composition-based stats.
 Identities = 18/48 (37%), Positives = 30/48 (62%)

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           ++WG+ + G+LGHG + N Q P L++AL    ++ V CG   + A+ L
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYHSCAVSL 48


>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 599

 Score =  235 bits (599), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 162/468 (34%), Positives = 230/468 (49%), Gaps = 44/468 (9%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           D+++WG G   G LG           D +   LP V+ES +  +   IACG  H + +  
Sbjct: 163 DLYLWGGG-DRGRLG---------HKDDKPRFLPNVVESLLGQNVTMIACGGSHTIALNS 212

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           +GQ+FSWG G  G LGHG   D   P +ID  L   N+  VAC E H+  ++  G+LYTW
Sbjct: 213 KGQVFSWGAGPQGCLGHGNLRDRYSPLMIDGPLRDVNVVHVACYENHSAVISEDGNLYTW 272

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           G     LG +   S      PR V   + G +I  + CG  HT  I   G++++FG   F
Sbjct: 273 GKAGPFLGYMDD-SVTKQTKPRLVDA-LYGTRIVQVACGRSHTLVIDEEGRVYSFGINKF 330

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           G LG G   + + P  V  L  +  V  SCG  H+AAI E        +G+    LF WG
Sbjct: 331 GELGQGHDKAITKPTMVPNLVSICKV--SCGRHHSAAIDE--------DGV----LFMWG 376

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            GA GQLG G+ +    P  V   +D     V+CG+  T A+TA G  +  G     Q G
Sbjct: 377 WGARGQLGQGEPKSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASSQCG 436

Query: 553 SPGSTGKFPTRIEGNIKHRYIE--DIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            P S     +   G +    I    I CG+    +V+S  +++TWG   +GQLG+G  E 
Sbjct: 437 VPSSVYGELSSPRGIVLPSGIRPTQINCGANFTVLVTSIGQLFTWGCNMSGQLGNG--EA 494

Query: 611 KQT---PTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHN 667
           K+T   P  VE+L +K+VK V CG +    +  H  V   +   C  C+  F   RRRH+
Sbjct: 495 KKTFSQPMPVESLSEKRVKMVACGEDHIGCLVGHGWVPDEEVKSCMACKKSFTAIRRRHH 554

Query: 668 CYNCGLVYCKLCSSKKSMKTALAPEINK----PYRVCDDCFIKLNTTS 711
           C  CG ++C  CS+K+       P ++K    P RVCD C++ L+++S
Sbjct: 555 CRQCGGIFCGSCSTKR------YPLLDKGHADPVRVCDKCYVSLSSSS 596



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 87/158 (55%), Gaps = 4/158 (2%)

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
           +S  L+ WG G  G+LGH D +PR +P  V+     +   +ACG S TIAL + GQVFS 
Sbjct: 160 NSCDLYLWGGGDRGRLGHKDDKPRFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSW 219

Query: 544 GSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
           G+   G LG      ++ P  I+G ++   +  +AC   H AV+S    +YTWGK A   
Sbjct: 220 GAGPQGCLGHGNLRDRYSPLMIDGPLRDVNVVHVACYENHSAVISEDGNLYTWGK-AGPF 278

Query: 603 LGHGDNE-NKQT-PTLVEALRDKQVKSVVCGSNFTAAI 638
           LG+ D+   KQT P LV+AL   ++  V CG + T  I
Sbjct: 279 LGYMDDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVI 316


>gi|384245633|gb|EIE19126.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 1375

 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 151/457 (33%), Positives = 217/457 (47%), Gaps = 89/457 (19%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           GD ++WG           +   + S  DR+ +  P ++E +  LD   +A G +HA LVT
Sbjct: 249 GDCYVWGSS------DAGIPPAQGSICDRQQSATPAIVEDSTHLDVCQVAVGLRHAALVT 302

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           + G++++WG G+GGKLG G   D   P+ +D L G  I  +  G      V+  G LYTW
Sbjct: 303 RSGEVYTWGNGAGGKLGLGHATDACAPQRVDTLWGQRIRSIVAG----AVVSEEGFLYTW 358

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           GDG    G LG  + +  +IPR+V G +    I+ + CGP+H+AA++S G LFT+GDG  
Sbjct: 359 GDGA--AGNLGYSNALRQFIPRRVEGTLLDHTITQVSCGPYHSAALSSTGALFTWGDGLC 416

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG------------- 479
           G LGHG   S   PR+V+ LK+ + +  +CGVWHTAAI   AG   G             
Sbjct: 417 GKLGHGCLDSCLEPRQVDALKDKRVLHVACGVWHTAAI--AAGPIGGSSLPSSLSELSFQ 474

Query: 480 -SNGLSSK-------------KLFTWG--------------------DGAEGQLGHGDAE 505
            +  L  K              LFTWG                    D   G LGHGD  
Sbjct: 475 EAEALRHKLSAAYSMLDEEGGALFTWGGHFTWVDHRKNSAGHPVDKRDHHRGCLGHGDTA 534

Query: 506 PRVVPLCVKVS-DDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT-- 562
             + P  V  +   ++  +V CG ++T+ALTA G+++ M     G+ G+PG   K     
Sbjct: 535 GCLAPTRVGGALQGLAVRQVECGLNLTVALTADGRIWQM-----GETGAPGH--KLAPWE 587

Query: 563 ----RIEGNIKHRYIEDIACGSYHIAVVSSK--------------SEVYTWGKGANGQLG 604
                ++  I   Y+E IA G  H A ++                S ++TWG+G  GQLG
Sbjct: 588 GAREAVQVPIPDHYVERIAVGMQHAAALAGPLDGQTGRAEEGAECSVIFTWGRGREGQLG 647

Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
            G + +   P  V+ LR + V  V CG   T A+C H
Sbjct: 648 VGMHADSAIPAPVDELRGRHVLQVACGGCHTLAVCRH 684



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 73/117 (62%), Gaps = 6/117 (5%)

Query: 10  VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWY-AGKEEKQLKLSHVSR 68
             R  ++ +  L+KGT LLK+GR GKPK   FRL+  + +L W  A  + + + L+ V +
Sbjct: 63  TRRTADEMLTALRKGTDLLKHGRLGKPKMHFFRLAEGDSVLTWRSANGKPRSIPLASVKQ 122

Query: 69  IIPGQRTAVFQRYPQPEKEYQSFSLIY-----RNRSLDLICKDKDEAELWFTALRAL 120
           +I GQ T +F+R+P P   + SFSL+Y      +R+LDL C+++ E +LW+  ++A+
Sbjct: 123 VIKGQLTEIFKRHPLPHMAHASFSLMYIDLDLSSRTLDLTCRNQQEFDLWYWGIQAI 179


>gi|345292915|gb|AEN82949.1| AT5G12350-like protein, partial [Capsella grandiflora]
          Length = 169

 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 102/156 (65%), Positives = 132/156 (84%), Gaps = 2/156 (1%)

Query: 318 FSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH 377
           FSWGE S G+LGHGV+++V +PKLIDAL  +NI +VACGE+ +CAV+LSGDLYTWG G  
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYXSCAVSLSGDLYTWGKG-- 58

Query: 378 NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH 437
           + G+LG  +E+SHW+P++V+  MEG+ +SSI CGP+HTA +TSAG+LFTFGDGTFG LGH
Sbjct: 59  DFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGH 118

Query: 438 GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           GDR S  +PRE+++LK L+TV A+CGVWHTAA+VEV
Sbjct: 119 GDRKSVFIPREIDSLKGLRTVRAACGVWHTAAVVEV 154



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 82/151 (54%), Gaps = 1/151 (0%)

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           F+WG+ +EG+LGHG       P  +      +   VACG   + A++ +G +++ G  D+
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYXSCAVSLSGDLYTWGKGDF 60

Query: 549 GQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
           G LG       + P R+   ++  ++  IACG YH AVV+S  +++T+G G  G LGHGD
Sbjct: 61  GILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGD 120

Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            ++   P  +++L+  +     CG   TAA+
Sbjct: 121 RKSVFIPREIDSLKGLRTVRAACGVWHTAAV 151



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 13/125 (10%)

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE-LKTVMASC 462
            I  + CG + + A++ +G L+T+G G FG LGHG+  S  VP+ V  L E +     +C
Sbjct: 32  NIELVACGEYXSCAVSLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIAC 91

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
           G +HTA +             S+ +LFT+GDG  G LGHGD +   +P  +     +   
Sbjct: 92  GPYHTAVVT------------SAGQLFTFGDGTFGVLGHGDRKSVFIPREIDSLKGLRTV 139

Query: 523 KVACG 527
           + ACG
Sbjct: 140 RAACG 144



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 13/114 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISS--ADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
           GD++ WG+G   G+LG   +G E+S     R + L+  +          SIACG  H  +
Sbjct: 50  GDLYTWGKG-DFGILG---HGNEVSHWVPKRVNFLMEGI-------HVSSIACGPYHTAV 98

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVT 364
           VT  GQ+F++G+G+ G LGHG    V  P+ ID+L G      ACG +HT AV 
Sbjct: 99  VTSAGQLFTFGDGTFGVLGHGDRKSVFIPREIDSLKGLRTVRAACGVWHTAAVV 152



 Score = 43.5 bits (101), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 30/48 (62%)

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           ++WG+ + G+LGHG + N Q P L++AL    ++ V CG   + A+ L
Sbjct: 1   FSWGEESEGRLGHGVDSNVQHPKLIDALGTTNIELVACGEYXSCAVSL 48


>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
 gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
          Length = 596

 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 134/382 (35%), Positives = 204/382 (53%), Gaps = 31/382 (8%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           I++WGEG+ G LGHG +   ++P +++AL G +I  VACG  HT A++  G++++WG G 
Sbjct: 209 IYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGEVFSWGSGY 268

Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA---GKLFTFGDGTFG 433
              G LGQ      + P ++ G +E L ++ + C  +H+AA+ +    G LF+FG+  +G
Sbjct: 269 G--GRLGQGHLRDRFTPIRICG-LESLNLTQVACNEFHSAAVCACSKQGALFSFGENDYG 325

Query: 434 ALG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            LG   D+  TS  + V +L E K    +CG +H+AA+ E      GS       L+ WG
Sbjct: 326 QLGIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAE-----HGS-------LWLWG 373

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDI---SFCKVACGHSITIALTATGQVFSMGSADYG 549
               GQLG+G+     +P  ++  +D+   +  +VACG   +  +T  G++F  G   YG
Sbjct: 374 CNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTYG 433

Query: 550 QLGS-------PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
           QLG+          T     R+      R +  +ACG  H AVV+   E++TWG+G  G+
Sbjct: 434 QLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVH-VACGDSHTAVVTDGGEIFTWGRGKGGR 492

Query: 603 LGHGDNENKQTPTLVE-ALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           LGHGDN N+  PT +E  +  K V+ V CG   TA       V   +   C  C+ +F  
Sbjct: 493 LGHGDNLNRHLPTEIEIGMEGKHVRGVSCGRAHTACTVTRAWVPDQEVKTCMACKTRFTT 552

Query: 662 RRRRHNCYNCGLVYCKLCSSKK 683
            RRRH+C  CG V+C  CSSK+
Sbjct: 553 VRRRHHCRKCGGVFCGACSSKR 574



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 146/533 (27%), Positives = 234/533 (43%), Gaps = 87/533 (16%)

Query: 29  KYGRRGKPKFCPFRLSSDEKLLIWYA---GKEEKQLKLSHVSRIIPGQRTAVFQRYPQPE 85
           ++   G+P F  F+LS D   L W +   GKE+  + +S + ++I GQ+T VF+    P+
Sbjct: 62  RFISNGRPHFRRFKLSKDLSSLEWDSPRKGKEKSVVPISMMIQLIIGQKTKVFESCQVPQ 121

Query: 86  KEYQSFSLIYRN-----RSLDLICKDKDEAELWFTALRALISEDNRCKSRSDSISSDSPR 140
            E  SFS++Y+      RSLD++CK + E ++W   ++AL+S  +  ++ +     DS  
Sbjct: 122 YECLSFSIMYKVNNGPIRSLDIVCKSRREFDIWTCGIQALLSGFSDIQAMNKVDFEDS-- 179

Query: 141 SHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLSFTAAAKAYTR 200
                               +D  D+  + V +       LG+A   V     A   YT 
Sbjct: 180 --------------------QDQTDSGTVEVEF-----GLLGQATVHVKE--DACDIYTW 212

Query: 201 AESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE-DFDGLGDVFIWG 259
            E  +  L      G D   +     ++    L   +   + G+ H       G+VF WG
Sbjct: 213 GEGTNGMLGH----GEDTQEAHPHVVEAL---LGKDIRKVACGATHTLALSKDGEVFSWG 265

Query: 260 EGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV---TKQGQ 316
            G G  L  G +          RD   P  +     L+   +AC   H+  V   +KQG 
Sbjct: 266 SGYGGRLGQGHL----------RDRFTPIRICGLESLNLTQVACNEFHSAAVCACSKQGA 315

Query: 317 IFSWGEGSGGKLGHGVEAD---VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           +FS+GE   G+L  G+  D    SY + + +L+   I  VACG FH+ A+   G L+ W 
Sbjct: 316 LFSFGENDYGQL--GIPEDKLLTSYIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLW- 372

Query: 374 DGIHNLGLLGQVSEISHWIPR--KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            G +  G LG  +  S  +P   +    +    +  + CG  H+A IT  G++F  GD T
Sbjct: 373 -GCNESGQLGNGNYTSTSLPSLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNT 431

Query: 432 FGALG------HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
           +G LG        D  + +V   V    + + V  +CG  HTA + +             
Sbjct: 432 YGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTD------------G 479

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK-VACGHSITIALTAT 537
            ++FTWG G  G+LGHGD   R +P  +++  +    + V+CG + T A T T
Sbjct: 480 GEIFTWGRGKGGRLGHGDNLNRHLPTEIEIGMEGKHVRGVSCGRAHT-ACTVT 531



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 36/60 (60%)

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G   + V     ++YTWG+G NG LGHG++  +  P +VEAL  K ++ V CG+  T A+
Sbjct: 196 GQATVHVKEDACDIYTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLAL 255


>gi|145351110|ref|XP_001419929.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580162|gb|ABO98222.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 783

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/389 (36%), Positives = 201/389 (51%), Gaps = 43/389 (11%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+VLE T  LD   IA G++H +  T+ G ++SWGEG+GGKLG     D   P  ++ L+
Sbjct: 65  PRVLEGTDTLDVVEIAIGARHGLARTRAGAVYSWGEGAGGKLGLPSAQDAEMPTRVE-LD 123

Query: 347 GSNIHMVACGEFHTCAVTLS---------GDLYTWGDGIHNLGLLGQV-SEISHWIPRKV 396
           G  + + ACG  H+ AV            GD   WGD     GLLG+  +    + P K+
Sbjct: 124 GRAVTL-ACGVAHSLAVVRDADASSDGDGGDACVWGDPNAAPGLLGRPEARAVTFFPGKI 182

Query: 397 SGQME------GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
           S  M+      G+++  + CGP HTA +T  G  FT+G+G+F ALGHGDR     PRE+E
Sbjct: 183 SFAMDSISAGGGVKVVQVSCGPCHTACVTETGACFTWGEGSFYALGHGDRECQRAPRELE 242

Query: 451 TLKELKTVM--ASCGVWHTAAIVEVAGKTSGSNGLSSK---------KLFTWGDGAEGQL 499
           T +    V+   +CGVWHTAAIV   G T     + +          +LFTWGDG  GQL
Sbjct: 243 TFRRDNRVVLRVACGVWHTAAIVAAVGNTIRKVPVVADDDEFDTVDGELFTWGDGESGQL 302

Query: 500 GHGDAEPRVVPLCVKVSDDI-----SFCKVACGHSITIALTATGQVFSMGSADYGQLGSP 554
           G    E   VP     SD +       C V+CG   T+ALT+ G V+  G    G++ + 
Sbjct: 303 GIRGVEEASVPTA--TSDQLGKPGSEVCNVSCGQHHTVALTSKGDVWLAGC--VGKVDNS 358

Query: 555 GSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE-NKQT 613
                F TR+  N +   +  +  G  H+   +    V++WG G NG+LGHG N+ +K  
Sbjct: 359 LRVKVF-TRLP-NFETGSVSAVESGDNHVVAATRDGRVFSWGVGKNGRLGHGKNDRDKAA 416

Query: 614 PTLVEALRDKQVKSVVCGSNFTAAICLHK 642
           P  +E+LR + V  + CG   T++ C+ K
Sbjct: 417 PEEIESLRGRTVLRIACGP--TSSACVLK 443



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 162/399 (40%), Gaps = 99/399 (24%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLD--AQSIACGSKHAVL 310
           G V+ WGEG G G LG       + SA  +DA +P  +E    LD  A ++ACG  H++ 
Sbjct: 93  GAVYSWGEGAG-GKLG-------LPSA--QDAEMPTRVE----LDGRAVTLACGVAHSLA 138

Query: 311 VTKQ---------GQIFSWGE--GSGGKLGHGVEADVSY--------PKLIDALNGSNIH 351
           V +          G    WG+   + G LG      V++           I A  G  + 
Sbjct: 139 VVRDADASSDGDGGDACVWGDPNAAPGLLGRPEARAVTFFPGKISFAMDSISAGGGVKVV 198

Query: 352 MVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV-SGQMEGLQISSICC 410
            V+CG  HT  VT +G  +TWG+G  +   LG         PR++ + + +   +  + C
Sbjct: 199 QVSCGPCHTACVTETGACFTWGEG--SFYALGHGDRECQRAPRELETFRRDNRVVLRVAC 256

Query: 411 GPWHTAAITSA---------------------GKLFTFGDGTFGALGHGDRSSTSVPREV 449
           G WHTAAI +A                     G+LFT+GDG  G LG       SVP   
Sbjct: 257 GVWHTAAIVAAVGNTIRKVPVVADDDEFDTVDGELFTWGDGESGQLGIRGVEEASVP--T 314

Query: 450 ETLKEL-----KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA 504
            T  +L     +    SCG  HT A+              + K   W  G  G++ +   
Sbjct: 315 ATSDQLGKPGSEVCNVSCGQHHTVAL--------------TSKGDVWLAGCVGKVDNS-- 358

Query: 505 EPRVVPLCVKVSDDI------SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG 558
                 L VKV   +      S   V  G +  +A T  G+VFS G    G+LG  G   
Sbjct: 359 ------LRVKVFTRLPNFETGSVSAVESGDNHVVAATRDGRVFSWGVGKNGRLGH-GKND 411

Query: 559 K---FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
           +    P  IE +++ R +  IACG    A V   + + T
Sbjct: 412 RDKAAPEEIE-SLRGRTVLRIACGPTSSACVLKPARMTT 449



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 125/282 (44%), Gaps = 69/282 (24%)

Query: 237 VSSSSQGSCHED-FDGLGDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLE 291
           V   S G CH       G  F WGEG    LG+G              DR     P+ LE
Sbjct: 197 VVQVSCGPCHTACVTETGACFTWGEGSFYALGHG--------------DRECQRAPRELE 242

Query: 292 S-----TVVLDAQSIACGSKHAVLV---------------------TKQGQIFSWGEGSG 325
           +      VVL    +ACG  H   +                     T  G++F+WG+G  
Sbjct: 243 TFRRDNRVVL---RVACGVWHTAAIVAAVGNTIRKVPVVADDDEFDTVDGELFTWGDGES 299

Query: 326 GKLG-HGVEADVSYPKLI-DALN--GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGL 381
           G+LG  GVE + S P    D L   GS +  V+CG+ HT A+T  GD++          L
Sbjct: 300 GQLGIRGVE-EASVPTATSDQLGKPGSEVCNVSCGQHHTVALTSKGDVW----------L 348

Query: 382 LGQVSEISHWIPRKVSGQMEGLQ---ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG 438
            G V ++ + +  KV  ++   +   +S++  G  H  A T  G++F++G G  G LGHG
Sbjct: 349 AGCVGKVDNSLRVKVFTRLPNFETGSVSAVESGDNHVVAATRDGRVFSWGVGKNGRLGHG 408

Query: 439 --DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
             DR   + P E+E+L+    +  +CG   +A +++ A  T+
Sbjct: 409 KNDRDK-AAPEEIESLRGRTVLRIACGPTSSACVLKPARMTT 449


>gi|255080574|ref|XP_002503867.1| predicted protein [Micromonas sp. RCC299]
 gi|226519134|gb|ACO65125.1| predicted protein [Micromonas sp. RCC299]
          Length = 1066

 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 198/682 (29%), Positives = 312/682 (45%), Gaps = 110/682 (16%)

Query: 16  QAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYA-GKEEKQLKLSHVSRIIPGQR 74
           +A   L++G  LLK  R  KP    F+LS DE  L W   G   K +++  V ++I G+ 
Sbjct: 19  EARTALRRGANLLKLCRNAKPHVAYFQLSKDETKLEWVGKGARVKAVRMGLVLQVIAGRE 78

Query: 75  TAVFQRYPQPEKEYQSFSLIYRN------RSLDLICKDKDEAELWFTALRALISEDNRCK 128
           T  F+   QP    Q  SL+YR       RSLDL+C+D  +A +W   L A+        
Sbjct: 79  TPAFKSSKQPSPPDQCLSLMYREGVGKKPRSLDLVCEDAGQARMWRLGLDAVRERGG--- 135

Query: 129 SRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEV 188
                                  + ++++  + D  D  P      ++  + +   F   
Sbjct: 136 -----------------------AGVTAEAFSSDDEDVVPASSPVRDAKLDEMAADFGVA 172

Query: 189 LSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHED 248
           +   +AA  + + +S          GG +  +         R   SSA+S   +      
Sbjct: 173 MKVNSAASKFMKLKS--------PRGGAEQGD----VGRGRRSLRSSAISDPRE------ 214

Query: 249 FDGLGDVFIWGE----------GLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDA 298
                 +F+WG            +G+     A  GV  +    R+  +P        LD 
Sbjct: 215 ------LFLWGRMPSEFEPPPIDVGDP---DAAAGVGPAVGGWREWSVPARAPGADGLDV 265

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGS--------- 348
            ++A G++HAV V +   +++WG+G+GG+LG GV+      P  +  ++G          
Sbjct: 266 VAVALGARHAVAVVRHQGVYTWGDGAGGRLGRGVDQRGRGRPSKLSVVSGGEVSDRGAGF 325

Query: 349 -NIHMVACGEFHTCAVTLS-GDLYTWGD---GIHN-LGLL----GQVSEISHWIPRKVS- 397
             I  V+CG  +T AV    G  Y WGD   G H  LG+     G V+ +S  +P KVS 
Sbjct: 326 ERIREVSCGGQYTVAVNYGDGAAYAWGDASGGCHGALGMASPSKGIVAGVS--LPTKVSV 383

Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH-GDRSSTSVPREVETLKEL- 455
           G   G ++S + CG +H AA+T+AG LF +G+G F ALGH GD+S+   PR V  L +  
Sbjct: 384 GFPVGTRVSRVSCGAFHAAAVTAAGDLFCWGEGAFHALGHDGDKSTCQHPRRVRGLWDAG 443

Query: 456 -KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD--AEPRVVPLC 512
            +    SCGV+HTAA+  +   T+G  G    +L+TWGD   G+LGHG   A+ + V   
Sbjct: 444 RRVSNVSCGVYHTAAVA-IDRTTTGCAGRG--ELWTWGDADGGKLGHGAEAAKEKAVVAP 500

Query: 513 VKVS---DDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIK 569
            +VS   ++     V+CG   T+A  A G V+  GS   G++ +P      P R+ G   
Sbjct: 501 RRVSGLDENADVTTVSCGQWHTLAACADGVVWVCGS--VGKV-APAEPALTPERVPGIPG 557

Query: 570 HRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSV 628
               E IA G +H +A+     ++++WG+G  G LGH    ++  P  VEAL  ++V  V
Sbjct: 558 G--AEAIASGEWHAVAIGRGGEKMFSWGRGRRGALGHAGGRDEHAPRAVEALAGRRVHHV 615

Query: 629 VCGSNFTAAICLHKGVSIADHS 650
            CG   TAA+   + +++ + +
Sbjct: 616 ACGPESTAAVVSSRSMTVQERA 637



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 11/97 (11%)

Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHG-DNENKQTPTLVEALRD----------KQ 624
           +A G+ H   V     VYTWG GA G+LG G D   +  P+ +  +            ++
Sbjct: 268 VALGARHAVAVVRHQGVYTWGDGAGGRLGRGVDQRGRGRPSKLSVVSGGEVSDRGAGFER 327

Query: 625 VKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           ++ V CG  +T A+    G + A      GC      
Sbjct: 328 IREVSCGGQYTVAVNYGDGAAYAWGDASGGCHGALGM 364


>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 545

 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 136/387 (35%), Positives = 198/387 (51%), Gaps = 28/387 (7%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           V+ WG G    L      G+  +S   R   +  + E  +V     IACGS H V++T++
Sbjct: 3   VYSWGRGEDGQL------GLGDTSDQHRPVPIDALAERRIV----QIACGSGHTVVLTEE 52

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           G++++WG G  G+LGHG       P+L++ L G NI  V CG +HT AVT+SGDLYTWG 
Sbjct: 53  GEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGG 112

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
           G++  G LG  +E  H  P  V   ++ +Q+  + CG  HT  +     ++T+GD   G 
Sbjct: 113 GMY--GKLGHGNETGHSTPYLVE-TLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGV 169

Query: 435 LGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
            GHGD      +P  VE L+    V  S   +HTAA+ E              ++FT+G+
Sbjct: 170 SGHGDTEGHQYLPCPVEELRGKSIVQISACGFHTAALSEFG------------EVFTFGE 217

Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS 553
           G  G+LGH     + V   V         +VACG   T A+T TG+V++ G  ++GQLG 
Sbjct: 218 GKFGRLGHNSERNQPVARFVDALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGH 277

Query: 554 PGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                K  PTR+E ++  + +  I CG  H   ++   EVYTWG G +G+LGH D     
Sbjct: 278 GDKVNKTVPTRVE-SLLEKLVLQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVT 336

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAIC 639
            P  V+ L  K+V SV   +  T A+ 
Sbjct: 337 LPKPVDVLDGKRVISVASYNEHTVALV 363



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 119/223 (53%), Gaps = 20/223 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI----ACGSKHAV 309
           DV+ WG+           NGV           LP  +E    L  +SI    ACG  H  
Sbjct: 158 DVYTWGD---------KENGVSGHGDTEGHQYLPCPVEE---LRGKSIVQISACGF-HTA 204

Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
            +++ G++F++GEG  G+LGH  E +    + +DAL G  +  VACG FHT AVT +G++
Sbjct: 205 ALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVDALAGKRVKQVACGGFHTAAVTETGEV 264

Query: 370 YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
           YTWG G H  G LG   +++  +P +V   +E L +  I CG  HT  +T  G+++T+G+
Sbjct: 265 YTWGGGEH--GQLGHGDKVNKTVPTRVESLLEKL-VLQITCGWSHTVTLTDTGEVYTWGN 321

Query: 430 GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           G  G LGH D +  ++P+ V+ L   + +  +    HT A+V+
Sbjct: 322 GDHGKLGHNDTAKVTLPKPVDVLDGKRVISVASYNEHTVALVD 364



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 89/157 (56%)

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           +++WG G +GQLG GD   +  P+ +    +    ++ACG   T+ LT  G+V++ G  D
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGRGD 62

Query: 548 YGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG   +  KF  R+   ++ + I  + CGSYH A V+   ++YTWG G  G+LGHG+
Sbjct: 63  DGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGN 122

Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
                TP LVE L+  QV+ V CGS  T  +  +K V
Sbjct: 123 ETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKDV 159


>gi|320162832|gb|EFW39731.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 591

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 155/466 (33%), Positives = 237/466 (50%), Gaps = 47/466 (10%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           DV+ WGEG   G+LG      E S         P+V+E+ +  D + +  GS H + +  
Sbjct: 160 DVYTWGEGT-RGMLGHGEEDPEAS---------PRVVEALLGHDIKMLCLGSGHTMALAV 209

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G+++SWG G GG+LG G E D   P  +  L G +I  +AC E H+ AV  +G+ Y WG
Sbjct: 210 SGEVYSWGLGLGGRLGQGRERDRFTPLRLAGLRGFDITHIACNENHSVAVADNGEAYVWG 269

Query: 374 DGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            GI  +LG+ G      H  P ++   ++G ++    CG   T  +  +G+++  G+   
Sbjct: 270 RGIDGSLGVEGD----KHVSPTQIHA-LDGKRVVHAACGAAFTLFVIESGEVYACGNNEH 324

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           G LG G   + S P  V  L E + V  +CG  H  A+ E            + +L+ WG
Sbjct: 325 GQLGIGSNEAMSEPTLVTNLPE-RIVRIACGNSHAVALSE------------TGRLYAWG 371

Query: 493 DGAEGQLGHGDA-EPRVVPLCVK---VSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
             + GQLG G+  E R+ P+ V+   V DD++    ACG + TI L+ +G +++ GS   
Sbjct: 372 AHSSGQLGVGEPLEDRLSPVRVESNVVRDDVA--DFACGGNHTIILSNSGLLYAFGSGAQ 429

Query: 549 GQLGSPGSTGKFPTRIEG------NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
           GQLG     G   T+ +       N + R    I+CG    A VS + ++YTWG GA+  
Sbjct: 430 GQLG----LGPLATKNQATPAALPNPEGRKYTAISCGQDISAAVSDRGKIYTWGSGASNA 485

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFR 662
           LG  D   K  PTL+E++ DK+ ++V CG    AA  +H  V   + + C  C+ +F   
Sbjct: 486 LGLPDGRTKYAPTLIESMADKRCRTVACGFFHMAATIIHGWVPDDEATQCMACKLKFTTI 545

Query: 663 RRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLN 708
           RRRH+C  CG ++C  CS+KK     L    ++  RVCD C++ L+
Sbjct: 546 RRRHHCRKCGGIFCGNCSAKKF--PLLEAGFSESVRVCDKCYVILS 589


>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 545

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/386 (34%), Positives = 195/386 (50%), Gaps = 28/386 (7%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           V+ WG G  +G LG           D  D   P ++E+        I+CGS H V++T  
Sbjct: 3   VYTWGRG-EDGQLG---------LGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDD 52

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           G++++WG G  G+LGHG       P+L++ L    +  V CG +HT AVT+SG+LYTWG 
Sbjct: 53  GKVYTWGRGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGG 112

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
           G++  G LG  +E  H  P  V   ++GL +  + CG  HT  +     ++T+GD   G 
Sbjct: 113 GMY--GKLGHGNENGHSTPSLVE-SIKGLYVRQVACGSRHTVVLLENQDVYTWGDKENGV 169

Query: 435 LGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
            GHGD S     P  V  L E+     S   +HTAA+ E        NG    ++FT+G+
Sbjct: 170 SGHGDTSGHQYSPYCVSELVEINIKQISACGFHTAALSE--------NG----QVFTFGE 217

Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS 553
           G  G+LGH     + V  C+         +VACG   T A+T +G VF+ G  ++GQLG 
Sbjct: 218 GKFGRLGHNSERNQPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGH 277

Query: 554 PGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                +  PTR+E  I    I+ + CG  H   ++ K EV+TWG G +G+LGH D     
Sbjct: 278 GDKVNQIIPTRVESLIDKNIIQ-LTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDTNKVT 336

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P L+E    K+V SV   +  T A+
Sbjct: 337 EPKLIETFNSKRVISVASYNEHTVAL 362



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 119/219 (54%), Gaps = 14/219 (6%)

Query: 254 DVFIWGEGLGNGLLG-GAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           DV+ WG+   NG+ G G  +G + S         P  +   V ++ + I+    H   ++
Sbjct: 158 DVYTWGDK-ENGVSGHGDTSGHQYS---------PYCVSELVEINIKQISACGFHTAALS 207

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           + GQ+F++GEG  G+LGH  E +    K IDAL G  I  VACG FHT AVT SG ++TW
Sbjct: 208 ENGQVFTFGEGKFGRLGHNSERNQPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTW 267

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           G G H  G LG   +++  IP +V   ++   I  + CG  HT A+T  G++FT+G+G  
Sbjct: 268 GGGEH--GQLGHGDKVNQIIPTRVESLIDK-NIIQLTCGWSHTVALTDKGEVFTWGNGDH 324

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIV 471
           G LGH D +  + P+ +ET    + +  +    HT A+V
Sbjct: 325 GKLGHNDTNKVTEPKLIETFNSKRVISVASYNEHTVALV 363


>gi|440793979|gb|ELR15150.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 566

 Score =  209 bits (533), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 142/422 (33%), Positives = 206/422 (48%), Gaps = 63/422 (14%)

Query: 326 GKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           G++GHG E D   P++++AL G ++  +ACG  HT A   +G LYTWG G    G LG  
Sbjct: 156 GRVGHGDEEDHKVPRVVEALLGKDVRGIACGAAHTAAWNGAGVLYTWGAG---QGRLGHD 212

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
            E   +IP +VS  + G ++    CG  HTAAIT AG+++T+G G  G LGHGD S+ S 
Sbjct: 213 HERDRFIPLEVSA-LGGKKVVQAACGYAHTAAITDAGRVYTWGQGKGGVLGHGDESACST 271

Query: 446 PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE 505
           PREV +L     V+          +V VA   +G +G     ++ WG   +GQLG GD  
Sbjct: 272 PREVASLALQVIVVVI-------VVVVVAAVVAGGSG----TVYAWGGNEKGQLGFGDRT 320

Query: 506 PRVVPLCVKVSDDISFCKVACGH---SITI-----ALTATGQVFSMGSADYGQLGSPGST 557
           PR+ P    ++D  S  ++AC +   ++ +     A     ++++ G    GQLG     
Sbjct: 321 PRMSP--ALLADLSSISRIACTYLQSNLPVKRRHRARQLMMRMWTWGDGASGQLGHGTEE 378

Query: 558 GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG----------- 606
            +   R    ++   I  +A G  H A ++S+ EV+TWG G++GQLGHG           
Sbjct: 379 EELVPRQVMALEQVNIIAVAAGKAHTAALTSQGEVWTWGDGSDGQLGHGAAILRYCKPLL 438

Query: 607 -------------------------DNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
                                      E    P  VEA+  K+VK+V CG    AA+ LH
Sbjct: 439 IESLKDSGHLYAWGNSRRGALGGGLAEEVVSVPRAVEAMEGKKVKAVACGKRHCAALVLH 498

Query: 642 KGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCD 701
             +   + ++C  C+  F   RRRH+C NCG ++C  CSSK+     L      P RVCD
Sbjct: 499 AWIPDEESTLCMACKAPFTMIRRRHHCRNCGGLFCGSCSSKRI--ALLDAGFASPVRVCD 556

Query: 702 DC 703
            C
Sbjct: 557 RC 558



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 137/516 (26%), Positives = 216/516 (41%), Gaps = 92/516 (17%)

Query: 16  QAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIPGQRT 75
           +A+ ++K+G   LK G RG P F   +LS D   L W + K  K    S +  I  GQ T
Sbjct: 13  EAIALMKRGCSFLKCGSRGSPHFRELKLSGDLTTLSWTSPK--KTSNQSTIDEIRIGQNT 70

Query: 76  AVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDNRCKSRSDSIS 135
            VF++  +PE E  SFS+IY +++LDL+ K+  E ++W   L+ L  E +   S  DS++
Sbjct: 71  PVFKKNRKPEYENVSFSIIYGDKTLDLVSKNVRERDIWVQGLKVLTLEPHLL-SEVDSVA 129

Query: 136 SDSPRSHTQ---KNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLSFT 192
           +D  +   +   K +      +S+D      GD +   V      +  LGK    +    
Sbjct: 130 TDEEKVSVKFKGKRTIVEKREVSNDNGRVGHGDEEDHKVP--RVVEALLGKDVRGI---- 183

Query: 193 AAAKAYTRAESVSKSLNFVASG----GLDDANSRSSTADSFRISLSSAVSSSSQGSCHED 248
           A   A+T A + +  L    +G    G D    R    +   +     V ++   +    
Sbjct: 184 ACGAAHTAAWNGAGVLYTWGAGQGRLGHDHERDRFIPLEVSALGGKKVVQAACGYAHTAA 243

Query: 249 FDGLGDVFIWGEGLGNGLLG---------------------------------------- 268
               G V+ WG+G G G+LG                                        
Sbjct: 244 ITDAGRVYTWGQGKG-GVLGHGDESACSTPREVASLALQVIVVVIVVVVVAAVVAGGSGT 302

Query: 269 ----GAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ--------GQ 316
               G     ++   DR   + P +L     +    IAC    + L  K+         +
Sbjct: 303 VYAWGGNEKGQLGFGDRTPRMSPALLADLSSIS--RIACTYLQSNLPVKRRHRARQLMMR 360

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           +++WG+G+ G+LGHG E +   P+ + AL   NI  VA G+ HT A+T  G+++TWGDG 
Sbjct: 361 MWTWGDGASGQLGHGTEEEELVPRQVMALEQVNIIAVAAGKAHTAALTSQGEVWTWGDG- 419

Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
            + G LG  + I  +                  C P    ++  +G L+ +G+   GALG
Sbjct: 420 -SDGQLGHGAAILRY------------------CKPLLIESLKDSGHLYAWGNSRRGALG 460

Query: 437 HG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIV 471
            G      SVPR VE ++  K    +CG  H AA+V
Sbjct: 461 GGLAEEVVSVPRAVEAMEGKKVKAVACGKRHCAALV 496



 Score = 46.2 bits (108), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 19/38 (50%), Positives = 27/38 (71%)

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           NG++GHGD E+ + P +VEAL  K V+ + CG+  TAA
Sbjct: 155 NGRVGHGDEEDHKVPRVVEALLGKDVRGIACGAAHTAA 192


>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 438

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/348 (34%), Positives = 194/348 (55%), Gaps = 18/348 (5%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT-KQGQIFSWGEGSGGKLGHGVE 333
           ++   D  D L P  L +    +  S+ CG+ H    +  + +++SWG G  G+LGHG  
Sbjct: 39  QLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNS 98

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +D+  PK I AL+G  I  +ACG+ H  AVT+ G++ +WG   +  G LG  +     +P
Sbjct: 99  SDLLTPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGR--NQNGQLGLGTTEDSLVP 156

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           +K+    EG+ I  +  G  HTAA+T  G+LF +G G +G LG GDR+   VP++V ++ 
Sbjct: 157 QKIQA-FEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVD 215

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
             K VM +CG  HT ++  + G            L+T+G    GQLGHGD E R+VP  +
Sbjct: 216 GDKMVMVACGWRHTISVSSLGG------------LYTYGWSKYGQLGHGDFEDRLVPHRL 263

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRY 572
           +     +  +++ G   T+ALT  G+++  G   +GQ+G+  +     P +I+     + 
Sbjct: 264 EALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKV 323

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           I+ I+CG  H   V+ K  V++WG+G NGQLGHG++ ++ TP ++EAL
Sbjct: 324 IQ-ISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMILEAL 370



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 80/157 (50%), Gaps = 1/157 (0%)

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT-ATGQVF 541
           LS   + +WG G +GQLGHGDAE R+ P  +   D      V CG   T A + A  +V+
Sbjct: 24  LSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSVARTEVY 83

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           S G  D+G+LG   S+     +    +    I  IACG  H   V+ + EV +WG+  NG
Sbjct: 84  SWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQNG 143

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           QLG G  E+   P  ++A     +K V  G+  TAA+
Sbjct: 144 QLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAV 180



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 3/119 (2%)

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYH 582
           ++ G S ++AL +   V S G  + GQLG   +  +  PT++     H  +  + CG+ H
Sbjct: 13  ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVS-VTCGADH 71

Query: 583 IAVVS-SKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
               S +++EVY+WG G  G+LGHG++ +  TP  ++AL   +++ + CG +   A+ +
Sbjct: 72  TTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIACGDSHCLAVTM 130



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 32/46 (69%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           I+CG +H + VT +  +FSWG G+ G+LGHG   D + P +++AL+
Sbjct: 326 ISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMILEALS 371


>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
           gaditana CCMP526]
          Length = 511

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/359 (34%), Positives = 194/359 (54%), Gaps = 18/359 (5%)

Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
           D  +P  +E    L    IACGS H V++T+   ++SWG G  G+LGH        P L+
Sbjct: 26  DQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGDDGRLGHADNHWKYVPHLV 85

Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
            AL G +I  V CG +HT A++ +G L+TWG G++  G LG  +E+ H  P +V   + G
Sbjct: 86  SALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMY--GKLGHGNEVGHPAPCRVEAFI-G 142

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS-VPREVETLKELK-TVMA 460
            ++  I CG  HTAA+ + G+++ +GD   G  G G+ +    +P+++E LK +K T +A
Sbjct: 143 REVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAAEHQYLPKKLEALKGVKITQIA 202

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
           +CG +HTAAI +               L++WG+G  G+LG G+ + +V P CV+    + 
Sbjct: 203 ACG-FHTAAITQ------------DGALWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGVR 249

Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS 580
             +VACG   +  +T  G V + G  ++GQLG    T +    +   ++   I  + CG 
Sbjct: 250 VKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCLVKALEGAGIVQVTCGW 309

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H   +S   +V+T+G G +G+LGHG N     P LVE+L + +V  V   +  T A+C
Sbjct: 310 SHTVTLSEDGKVFTFGNGDHGKLGHGANAKSALPKLVESLANMKVAKVASYNEHTVALC 368



 Score =  145 bits (367), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 155/297 (52%), Gaps = 26/297 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G ++ WG G+  G LG   +G E+          P  +E+ +  + + IACGS+H   + 
Sbjct: 110 GALWTWGGGM-YGKLG---HGNEVGHP------APCRVEAFIGREVEQIACGSRHTAALL 159

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             G+++ WG+   G  G G  A+  Y PK ++AL G  I  +A   FHT A+T  G L++
Sbjct: 160 AGGEVYCWGDRENGVCGIGEAAEHQYLPKKLEALKGVKITQIAACGFHTAAITQDGALWS 219

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG+G    G LGQ +E +   P  V G ++G+++  + CG +H+A +T  G + TFG G 
Sbjct: 220 WGEG--KFGRLGQGNEKNQVTPCCVEG-LQGVRVKQVACGGFHSACVTEDGDVLTFGGGE 276

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGHGD+++ +VP  V+ L+    V  +CG  HT  + E              K+FT+
Sbjct: 277 HGQLGHGDKTNRTVPCLVKALEGAGIVQVTCGWSHTVTLSE------------DGKVFTF 324

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           G+G  G+LGHG      +P  V+   ++   KVA  +  T+AL    Q  ++ S D+
Sbjct: 325 GNGDHGKLGHGANAKSALPKLVESLANMKVAKVASYNEHTVALCHAEQEQAVMSFDF 381



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 84/151 (55%)

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           L++WG G +GQ G+G    + +P+ V+    ++  ++ACG   T+ LT    V+S G  D
Sbjct: 8   LYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGD 67

Query: 548 YGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG   +  K+   +   +  + I+ + CGSYH A +S    ++TWG G  G+LGHG+
Sbjct: 68  DGRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLGHGN 127

Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
                 P  VEA   ++V+ + CGS  TAA+
Sbjct: 128 EVGHPAPCRVEAFIGREVEQIACGSRHTAAL 158



 Score = 44.7 bits (104), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 31/55 (56%)

Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           S +Y+WG+G +GQ G+G   +++ P  VE L+   V  + CGS  T  +   K V
Sbjct: 6   SMLYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDV 60


>gi|413923469|gb|AFW63401.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 502

 Score =  204 bits (518), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/356 (35%), Positives = 191/356 (53%), Gaps = 45/356 (12%)

Query: 564 IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDK 623
           +EG +K  +++DI+CGS H+AV++   +V+TWGKG  GQLG GD  ++ +PTLVEAL DK
Sbjct: 2   VEGPLKTEFVKDISCGSSHVAVLAMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALEDK 61

Query: 624 QVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKK 683
           QV S+VC SN TAAIC+H  +S  D S+CS CR  F F R++HNCYNCG + C  CSS K
Sbjct: 62  QVDSIVCSSNSTAAICVHGEISSKDQSVCSSCRLAFRFTRKKHNCYNCGSMVCNSCSSNK 121

Query: 684 SMKTALAPEINKPYRVCDDCFIKLNTTSESGS---NSQIPRNSSGLFQN-------CKRV 733
             + ALAP+ +K  RVCD CF +LN T+E G     S+I +  S L +         + +
Sbjct: 122 VHRAALAPDKSKRCRVCDACFNELNKTAEHGKMSCGSKIQKEPSYLAETRTYTPKLSRML 181

Query: 734 TEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWE---------------PNSDFIKSN 778
            E   +  +  +  QS  +     A+P+   K +W                P+    K  
Sbjct: 182 KEANFIMEKMGSSAQSPGQRNQEPATPNQMQKERWGQVECPDRFKCARDNIPHRLTPKKQ 241

Query: 779 KISASPPGSRRVSRAPSPISRKSSPACSITMNSF---TDLANSEVIFEYSKQTNDNFNQE 835
            I   P     + R   P+S+K++   + T +      DL   +++ E  KQ        
Sbjct: 242 TIDDYP-----MRRMADPVSQKTAAPLTQTTSDRRKEQDLIE-KILLEEVKQ-------- 287

Query: 836 PDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLTAQ 891
              L+AQ+  L  + +   +++    RKL+ET  I ++EA K +AA+E+I+ LT Q
Sbjct: 288 ---LQAQVTTLAEECRHRSLKVRLYKRKLEETWLIVRDEATKCEAAEEIIKVLTNQ 340



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 42/71 (59%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + I+CGS H  ++   G++F+WG+G+ G+LG G   D S P L++AL    +  + C   
Sbjct: 12  KDISCGSSHVAVLAMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALEDKQVDSIVCSSN 71

Query: 359 HTCAVTLSGDL 369
            T A+ + G++
Sbjct: 72  STAAICVHGEI 82



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 38/75 (50%)

Query: 396 VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
           V G ++   +  I CG  H A +   GK+FT+G GT G LG GD    S P  VE L++ 
Sbjct: 2   VEGPLKTEFVKDISCGSSHVAVLAMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALEDK 61

Query: 456 KTVMASCGVWHTAAI 470
           +     C    TAAI
Sbjct: 62  QVDSIVCSSNSTAAI 76



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 17/97 (17%)

Query: 446 PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE 505
           P + E +K++     SCG  H A +          NG    K+FTWG G EGQLG GD  
Sbjct: 5   PLKTEFVKDI-----SCGSSHVAVL--------AMNG----KVFTWGKGTEGQLGLGDYV 47

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
            R  P  V+  +D     + C  + T A+   G++ S
Sbjct: 48  DRSSPTLVEALEDKQVDSIVCSSNSTAAICVHGEISS 84



 Score = 40.8 bits (94), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)

Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
           ++CG  H   + ++G ++TWG G    G LG    +    P  V   +E  Q+ SI C  
Sbjct: 14  ISCGSSHVAVLAMNGKVFTWGKGTE--GQLGLGDYVDRSSPTLVEA-LEDKQVDSIVCSS 70

Query: 413 WHTAAITSAGKL 424
             TAAI   G++
Sbjct: 71  NSTAAICVHGEI 82


>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
          Length = 4791

 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 196/391 (50%), Gaps = 25/391 (6%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            +DG G ++ WG     G LGG + G +I         LP   ES   L    +A G +  
Sbjct: 3928 WDGSGAIYGWGHN-HRGQLGG-LEGAKIK--------LPAPCESLSALRPIQLAGGEQTL 3977

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT  G+++S G G+ G+LG G    V  P L++++    I  VA   G  H  A++  
Sbjct: 3978 FAVTADGKVYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSE 4037

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G +Y+WG+G  + G LG  + +S+  P+ V   + G++I  I CG  H+AAITSAG L+T
Sbjct: 4038 GHVYSWGEG--DDGKLGHGNRLSYDRPKLVE-DLLGIEIVDIACGGHHSAAITSAGWLYT 4094

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+ VE L++ K +  +CG          +G           
Sbjct: 4095 WGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACG----------SGDAQTLCVTDDD 4144

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   VPL +     +   KV CG   ++ALT +G V++ G  
Sbjct: 4145 NVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKG 4204

Query: 547  DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            DY +LG          R    ++ + I  IA GS H    S K EV+TWG    GQLG G
Sbjct: 4205 DYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDG 4264

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K++  V CGS  T A
Sbjct: 4265 TTSALQRPRLVHALQGKKITRVACGSAHTLA 4295



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 125/390 (32%), Positives = 203/390 (52%), Gaps = 29/390 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            V++WG    + L  G + G +I    R + L          L    IA GSK   +V+++
Sbjct: 2953 VYVWGLNDKDQL--GGLKGSKIKIPVRSEVLSK--------LKPIHIAGGSKTLFIVSQE 3002

Query: 315  GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTW 372
            G++++ GEG+ G+LG G + ++  PKLI  L+   I  VA   G  H  A+T  G +++W
Sbjct: 3003 GKLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSW 3062

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            G+G    G LG  +  +   PR +   ++  +I  I CG  H+AAI S G+L+T+G G +
Sbjct: 3063 GEG--EDGKLGHGNCTTLDKPRLIES-LKSKRIRDIACGSGHSAAIASNGELYTWGLGEY 3119

Query: 433  GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK-LFTW 491
            G LGHGD ++   P+ V+ L   + V  +CG            + + +  L++   ++TW
Sbjct: 3120 GRLGHGDTATQMKPKLVQALSGQRVVQVACG-----------SRDAQTMSLTADGCVYTW 3168

Query: 492  GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
            GDG  G+LG G ++    PL V   + +   +V CG   ++ALT  G+V++ G  DY +L
Sbjct: 3169 GDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRL 3228

Query: 552  GSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            G       + PT +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G    
Sbjct: 3229 GHGNDHHVRKPTLVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTIV 3287

Query: 611  KQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
             + P+LV  L D ++  V CGS+ + A  L
Sbjct: 3288 NRKPSLVHELDDTRMNRVSCGSSHSIAWIL 3317



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 109/325 (33%), Positives = 161/325 (49%), Gaps = 33/325 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++ +WG   G K G+G     S P   DA+    I  + C E     ++LSG++Y     
Sbjct: 441 EVLAWG---GVKFGNG-----SSPFYCDAIAELGIKHLCCTERALLILSLSGNVY----- 487

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
           I   G   Q  +  H    K         I+S   G  H  A+T  G ++++G+G  G L
Sbjct: 488 IMYYGSETQYPQRMHSFSDKPV-----TMIASHSDGK-HYLALTQDGCVYSWGNGDGGRL 541

Query: 436 GHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGA 495
           GHGD  S   P+ +ETL E   +  +CG  ++AA+             +S +L+TWG G 
Sbjct: 542 GHGDNISHDEPKLIETLLEKNIIFIACGSTYSAALS------------ASGELYTWGRGN 589

Query: 496 EGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQLGS 553
            G+LGHG  +   VP  V          VACG   S T+ +TA+G VFS G  DYG+LG 
Sbjct: 590 YGRLGHGSNDDVTVPTLVTTLKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGR 649

Query: 554 PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQT 613
            GS G    +I   +    +  + CG    A ++++ EVYTWGKG   +LGHG+ E+ + 
Sbjct: 650 GGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLGHGNEEHVRY 709

Query: 614 PTLVEALRDKQVKSVVCGSNFTAAI 638
           P L+E+LRDK++K +  G     A+
Sbjct: 710 PKLIESLRDKKIKDLSVGGTHILAL 734



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 160/334 (47%), Gaps = 29/334 (8%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE--STVVLDAQSIACGSKHAVL 310
            G ++  GEG  NG LG           D  +   PK++   S  V+   ++  G KHA+ 
Sbjct: 3003 GKLYACGEGT-NGRLG---------LGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALA 3052

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
            +T+ G++FSWGEG  GKLGHG    +  P+LI++L    I  +ACG  H+ A+  +G+LY
Sbjct: 3053 LTQDGKVFSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAIASNGELY 3112

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFG 428
            TWG G    G LG     +   P+ V   + G ++  + CG     T ++T+ G ++T+G
Sbjct: 3113 TWGLG--EYGRLGHGDTATQMKPKLVQA-LSGQRVVQVACGSRDAQTMSLTADGCVYTWG 3169

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
            DG FG LG G       P  V+ L  L  V   CG   + A+ +              ++
Sbjct: 3170 DGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYG------------EV 3217

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            +TWG G   +LGHG+      P  V+         VA G    +A+T TGQV++ G  D+
Sbjct: 3218 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3277

Query: 549  GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
            GQ G+  +       +   +    +  ++CGS H
Sbjct: 3278 GQQGNGTTIVNRKPSLVHELDDTRMNRVSCGSSH 3311



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 171/357 (47%), Gaps = 27/357 (7%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   ++   L  + + C  +  ++++  G ++    GS          +  YP+ + + +
Sbjct: 456 PFYCDAIAELGIKHLCCTERALLILSLSGNVYIMYYGS----------ETQYPQRMHSFS 505

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
              + M+A      H  A+T  G +Y+WG+G  + G LG    ISH  P+ +   +E   
Sbjct: 506 DKPVTMIASHSDGKHYLALTQDGCVYSWGNG--DGGRLGHGDNISHDEPKLIETLLEK-N 562

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           I  I CG  ++AA++++G+L+T+G G +G LGHG     +VP  V TLK    V  +CG 
Sbjct: 563 IIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVHVACG- 621

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
                    +G +      +S  +F+WGDG  G+LG G ++    P  V    DI+  +V
Sbjct: 622 ---------SGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVVRV 672

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHI 583
            CG   + ALTA G+V++ G  D  +LG       ++P  IE +++ + I+D++ G  HI
Sbjct: 673 FCGGQFSAALTARGEVYTWGKGDAYRLGHGNEEHVRYPKLIE-SLRDKKIKDLSVGGTHI 731

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
             ++    VY WG+   GQ+          P+L   L  K V  +  G   + A C+
Sbjct: 732 LALTEDQFVYGWGRNDYGQIDPTLGPVVSEPSLCPTLSSKNVIGLASGPTQSFAWCM 788



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 145/289 (50%), Gaps = 31/289 (10%)

Query: 228 SFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLP 287
           SF     + ++S S G  +      G V+ WG G G G LG   +G  IS  +      P
Sbjct: 503 SFSDKPVTMIASHSDGKHYLALTQDGCVYSWGNGDG-GRLG---HGDNISHDE------P 552

Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
           K++E+ +  +   IACGS ++  ++  G++++WG G+ G+LGHG   DV+ P L+  L G
Sbjct: 553 KLIETLLEKNIIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKG 612

Query: 348 SNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
             +  VAC  G+  T  VT SG +++WGDG  + G LG+        P K+  ++  + +
Sbjct: 613 HMVVHVACGSGDSQTLCVTASGIVFSWGDG--DYGKLGRGGSDGSKTP-KIVDKLLDINV 669

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
             + CG   +AA+T+ G+++T+G G    LGHG+      P+ +E+L++ K    S G  
Sbjct: 670 VRVFCGGQFSAALTARGEVYTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGT 729

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ----LGHGDAEPRVVP 510
           H  A+ E             + ++ WG    GQ    LG   +EP + P
Sbjct: 730 HILALTE------------DQFVYGWGRNDYGQIDPTLGPVVSEPSLCP 766



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 113/222 (50%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   +P   E+L  L+ +  + G     A+          
Sbjct: 3931 SGAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRPIQLAGGEQTLFAVT--------- 3981

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  K+++ G GA G+LG G  +  +VP  ++    +   KVA   G    +AL++ G
Sbjct: 3982 ---ADGKVYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4038

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
             V+S G  D G+LG          ++  ++    I DIACG +H A ++S   +YTWGKG
Sbjct: 4039 HVYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKG 4098

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD++++  P +VEAL+D +V  V CGS     +C+
Sbjct: 4099 RYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCV 4140



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 132/278 (47%), Gaps = 21/278 (7%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GK+
Sbjct: 3931 SGAIYGWG---HNHRGQLGGLEGAKIKLPAPCES-LSALRPIQLAGGEQTLFAVTADGKV 3986

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            ++ G G  G LG G   S  VP  +E+++   +K V  + G  H  A+            
Sbjct: 3987 YSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4035

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S   +++WG+G +G+LGHG+      P  V+    I    +ACG   + A+T+ G +++
Sbjct: 4036 -SEGHVYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYT 4094

Query: 543  MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGAN 600
             G   YG+LG   S  +   ++   ++   + D+ACGS       V+    V++WG G  
Sbjct: 4095 WGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDY 4154

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4155 GKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVAL 4192



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 122/280 (43%), Gaps = 63/280 (22%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WGEG  +G LG        ++ D+     P+++ES      + IACGS H+  + 
Sbjct: 3057 GKVFSWGEG-EDGKLGHG----NCTTLDK-----PRLIESLKSKRIRDIACGSGHSAAIA 3106

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
              G++++WG G  G+LGHG  A    PKL+ AL+G  +  VACG  +  T ++T  G +Y
Sbjct: 3107 SNGELYTWGLGEYGRLGHGDTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGCVY 3166

Query: 371  TWGDG---------------------IHNLGL------------LGQVSEISHW------ 391
            TWGDG                     ++ LG+            L +  E+  W      
Sbjct: 3167 TWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYF 3226

Query: 392  -----------IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR 440
                        P  V G + G +I  +  G  H  A+T  G+++ +GD   G  G+G  
Sbjct: 3227 RLGHGNDHHVRKPTLVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTT 3285

Query: 441  SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
                 P  V  L + +    SCG  H+ A + V   T+G+
Sbjct: 3286 IVNRKPSLVHELDDTRMNRVSCGSSHSIAWILVDQPTNGN 3325



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 29/218 (13%)

Query: 238  SSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLD 297
            S  +Q  C  D D   +V+ WG+G    L  G  +G ++          P  ++S   L 
Sbjct: 4132 SGDAQTLCVTDDD---NVWSWGDGDYGKLGRGGSDGCKV----------PLKIDSLAGLG 4178

Query: 298  AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
               + CGS+ +V +T+ G +++WG+G   +LGHG +  V  P+ + AL G  I  +A G 
Sbjct: 4179 VIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGS 4238

Query: 358  FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
             H  A +  G+++TWGD  ++ G LG  +  +   PR V   ++G +I+ + CG  HT A
Sbjct: 4239 LHCVACSDKGEVFTWGD--NDEGQLGDGTTSALQRPRLVHA-LQGKKITRVACGSAHTLA 4295

Query: 418  ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
             ++A                  R   S P E + +KE+
Sbjct: 4296 WSTAK-------------ATQSRMPASAPMEYDLVKEI 4320



 Score = 41.6 bits (96), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 28/135 (20%), Positives = 56/135 (41%), Gaps = 14/135 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+V+ WG+G          +   +   +      PK++ES      + ++ G  H + +T
Sbjct: 686 GEVYTWGKG----------DAYRLGHGNEEHVRYPKLIESLRDKKIKDLSVGGTHILALT 735

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           +   ++ WG    G++   +   VS P L   L+  N+  +A G   + A  +S     W
Sbjct: 736 EDQFVYGWGRNDYGQIDPTLGPVVSEPSLCPTLSSKNVIGLASGPTQSFAWCMSA----W 791

Query: 373 GDGIHNLGLLGQVSE 387
             G + +  +  + E
Sbjct: 792 SGGANRVAFVVDICE 806


>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
 gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
          Length = 430

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/349 (34%), Positives = 186/349 (53%), Gaps = 19/349 (5%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK-QGQIFSWGEGSGGKLGHGVE 333
           ++   D  D LLP+++ +    +   +ACG+ H    +  +  I+SWG G  G+LGHG  
Sbjct: 36  QLGHGDAEDRLLPRIIGALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNS 95

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +D+  P  I AL G  I  +ACG+ H  AVT  G++Y+WG   +  G LG        +P
Sbjct: 96  SDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGR--NQNGQLGLGDTDDSLVP 153

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
            K+    EG+ +  +  G  HTAA+T +GKL+ +G G +G LG GDR    +P EV  + 
Sbjct: 154 HKLL-AFEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVG 212

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
           + K  M +CG  HT A+ +            S KL+T+G    GQLGHGD    ++P  V
Sbjct: 213 DEKMCMVACGWRHTIAVSQ------------SGKLYTYGWSKYGQLGHGDYADHLLPHQV 260

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHR 571
               + +  +V+ G   T+ALT  G+++  G   +GQ+GS G       P  I    +H+
Sbjct: 261 AALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGS-GDVDDHTSPQLISIPGQHQ 319

Query: 572 YIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
            +  ++CG  H   V+ K+ VY+WG+G +GQLGHGD  ++  P  ++AL
Sbjct: 320 RVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQAL 368



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 168/340 (49%), Gaps = 17/340 (5%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++ G+ H V +     + S+G G  G+LGHG   D   P++I ALN   I +VACG  HT
Sbjct: 10  VSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVACGADHT 69

Query: 361 CAVTLSG-DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
            A + +   +Y+WG G  + G LG  +    ++P  +   ++GL+I  I CG  H  A+T
Sbjct: 70  TAYSATRLTIYSWGWG--DFGRLGHGNSSDLFVPHPIK-ALQGLEIRQIACGDSHCLAVT 126

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
           + G+++++G    G LG GD   + VP ++   + +   M + G  HTAA+ +       
Sbjct: 127 ADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTD------- 179

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                S KL+ WG G  G LG GD   R++P  V    D   C VACG   TIA++ +G+
Sbjct: 180 -----SGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGK 234

Query: 540 VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
           +++ G + YGQLG               +    I  ++ G  H   ++   ++Y WG   
Sbjct: 235 LYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNK 294

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQ-VKSVVCGSNFTAAI 638
            GQ+G GD ++  +P L+      Q V  V CG   T A+
Sbjct: 295 FGQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAV 334



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 133/273 (48%), Gaps = 27/273 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+V+ WG    NG LG           D  D+L+P  L +   +  + +A G++H   VT
Sbjct: 129 GEVYSWGRNQ-NGQLG---------LGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVT 178

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G+++ WG G  G LG G   D   P  + A+    + MVACG  HT AV+ SG LYT+
Sbjct: 179 DSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTY 238

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
             G    G LG      H +P +V+   E   I+ +  G  HT A+T AGKL+ +G   F
Sbjct: 239 --GWSKYGQLGHGDYADHLLPHQVAALAE-FNITQVSGGWRHTVALTEAGKLYGWGWNKF 295

Query: 433 GALGHGDRSSTSVPREVETL-KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           G +G GD    + P+ +    +  + V  SCG  HT A+ +               +++W
Sbjct: 296 GQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTD------------KNNVYSW 343

Query: 492 GDGAEGQLGHGDAEPRVVPLCVK-VSDDISFCK 523
           G G  GQLGHGDA  R  P  ++ +S D S C+
Sbjct: 344 GRGTSGQLGHGDAVDRSAPKGIQALSADGSACE 376



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 96/186 (51%), Gaps = 13/186 (6%)

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
           E K ++ S G  HT A+            LS + + ++G G +GQLGHGDAE R++P  +
Sbjct: 4   ERKVLLVSAGASHTVAL------------LSGQVVCSFGRGEDGQLGHGDAEDRLLPRII 51

Query: 514 KVSDDISFCKVACGHSITIALTATG-QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY 572
              +D     VACG   T A +AT   ++S G  D+G+LG   S+  F       ++   
Sbjct: 52  GALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLE 111

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
           I  IACG  H   V++  EVY+WG+  NGQLG GD ++   P  + A     VK +  G+
Sbjct: 112 IRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGA 171

Query: 633 NFTAAI 638
             TAA+
Sbjct: 172 EHTAAV 177


>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 440

 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/351 (34%), Positives = 197/351 (56%), Gaps = 24/351 (6%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQ---SIACGSKHAVLVTK-QGQIFSWGEGSGGKLGH 330
           ++   D  D LLP  L +   LDAQ   SIACG+ H +  ++ + +++SWG G  G+LGH
Sbjct: 44  QLGHGDTDDRLLPTHLSA---LDAQQIDSIACGADHTLAYSESRNELYSWGWGDFGRLGH 100

Query: 331 GVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH 390
           G  +D+  P+ I AL G  I  +ACG+ H  AVT+ G++ +WG   +  G LG  +    
Sbjct: 101 GNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGR--NQNGQLGLGTSEDS 158

Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
            +P+K+    +G+ I  +  G  H+ AIT  G+L+ +G G +G LG GDR+   +P +V 
Sbjct: 159 LVPQKIQ-TFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVS 217

Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
           ++   K VM +CG  HT ++  + G            L+T+G    GQLGHG+ E  +VP
Sbjct: 218 SVDCDKMVMVACGWRHTISVSSLGG------------LYTYGWSKYGQLGHGNFEDSLVP 265

Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIK 569
             ++   D    +V+ G   ++ALT+TG ++  G   +GQ+G   +  +  P +++    
Sbjct: 266 QKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHD 325

Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
            + ++ I+CG  H   V+ K  V++WG+G NGQLGHGD  ++ +P ++EAL
Sbjct: 326 QKVVQ-ISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIEAL 375



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 173/344 (50%), Gaps = 26/344 (7%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+ G+ H V +     + SWG G  G+LGHG   D   P  + AL+   I  +ACG  HT
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHT 77

Query: 361 CAVTLS-GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
            A + S  +LY+WG G  + G LG  +     IP+ +   ++GL+I  I CG  H  A+T
Sbjct: 78  LAYSESRNELYSWGWG--DFGRLGHGNSSDLLIPQPIIA-LQGLRIKQIACGDSHCLAVT 134

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G++ ++G    G LG G    + VP++++T + +   M + G  H+ AI E       
Sbjct: 135 MEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE------- 187

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
            NG    +L+ WG G  G LG GD   R +P  V   D      VACG   TI++++ G 
Sbjct: 188 -NG----ELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGG 242

Query: 540 VFSMGSADYGQLGSPGSTGKF-----PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
           +++ G + YGQLG     G F     P +++  +  + I  ++ G  H   ++S   +Y 
Sbjct: 243 LYTYGWSKYGQLGH----GNFEDSLVPQKLQA-LSDKLISQVSGGWRHSMALTSTGLLYG 297

Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           WG    GQ+G GDN ++ +P  V+   D++V  + CG   T A+
Sbjct: 298 WGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAV 341



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 143/293 (48%), Gaps = 18/293 (6%)

Query: 348 SNIHMVACGEFHTCAVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
           S + +++ G  HT A+ LSG++  +WG G    G LG        +P  +S  ++  QI 
Sbjct: 13  SRVLLISAGASHTVAL-LSGNVVCSWGRG--EDGQLGHGDTDDRLLPTHLSA-LDAQQID 68

Query: 407 SICCGPWHTAAIT-SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
           SI CG  HT A + S  +L+++G G FG LGHG+ S   +P+ +  L+ L+    +CG  
Sbjct: 69  SIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDS 128

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
           H  A+                ++ +WG    GQLG G +E  +VP  ++    +    VA
Sbjct: 129 HCLAVT------------MEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVA 176

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAV 585
            G   ++A+T  G+++  G   YG LG      ++      ++    +  +ACG  H   
Sbjct: 177 AGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTIS 236

Query: 586 VSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           VSS   +YT+G    GQLGHG+ E+   P  ++AL DK +  V  G   + A+
Sbjct: 237 VSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMAL 289



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 68/119 (57%), Gaps = 3/119 (2%)

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYH 582
           ++ G S T+AL +   V S G  + GQLG   +  +  PT +   +  + I+ IACG+ H
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSA-LDAQQIDSIACGADH 76

Query: 583 -IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +A   S++E+Y+WG G  G+LGHG++ +   P  + AL+  ++K + CG +   A+ +
Sbjct: 77  TLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTM 135



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           I+CG +H + VT++  +FSWG G+ G+LGHG   D + PK+I+AL+
Sbjct: 331 ISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIEALS 376


>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
          Length = 440

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/351 (34%), Positives = 197/351 (56%), Gaps = 24/351 (6%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQ---SIACGSKHAVLVTK-QGQIFSWGEGSGGKLGH 330
           ++   D  D LLP  L +   LDAQ   SIACG+ H +  ++ + +++SWG G  G+LGH
Sbjct: 44  QLGHGDTDDRLLPTHLSA---LDAQQIDSIACGADHTLAYSESRNELYSWGWGDFGRLGH 100

Query: 331 GVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH 390
           G  +D+  P+ I AL G  I  +ACG+ H  AVT+ G++ +WG   +  G LG  +    
Sbjct: 101 GNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGR--NQNGQLGLGTSEDS 158

Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
            +P+K+    +G+ I  +  G  H+ AIT  G+L+ +G G +G LG GDR+   +P +V 
Sbjct: 159 LVPQKIQ-TFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVS 217

Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
           ++   K VM +CG  HT ++  + G            L+T+G    GQLGHG+ E  +VP
Sbjct: 218 SVDCDKMVMVACGWRHTISVSSLGG------------LYTYGWSKYGQLGHGNFEDSLVP 265

Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIK 569
             ++   D    +V+ G   ++ALT+TG ++  G   +GQ+G   +  +  P +++    
Sbjct: 266 QKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHD 325

Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
            + ++ I+CG  H   V+ K  V++WG+G NGQLGHGD  ++ +P ++EAL
Sbjct: 326 QKVVQ-ISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIEAL 375



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 173/344 (50%), Gaps = 26/344 (7%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+ G+ H V +     + SWG G  G+LGHG   D   P  + AL+   I  +ACG  HT
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIACGADHT 77

Query: 361 CAVTLS-GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
            A + S  +LY+WG G  + G LG  +     IP+ +   ++GL+I  I CG  H  A+T
Sbjct: 78  LAYSESRNELYSWGWG--DFGRLGHGNSSDLLIPQPIIA-LQGLRIKQIACGDSHCLAVT 134

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G++ ++G    G LG G    + VP++++T + +   M + G  H+ AI E       
Sbjct: 135 MEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE------- 187

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
            NG    +L+ WG G  G LG GD   R +P  V   D      VACG   TI++++ G 
Sbjct: 188 -NG----ELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTISVSSLGG 242

Query: 540 VFSMGSADYGQLGSPGSTGKF-----PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
           +++ G + YGQLG     G F     P +++  +  + I  ++ G  H   ++S   +Y 
Sbjct: 243 LYTYGWSKYGQLGH----GNFEDSLVPQKLQA-LSDKLISQVSGGWRHSMALTSTGLLYG 297

Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           WG    GQ+G GDN ++ +P  V+   D++V  + CG   T A+
Sbjct: 298 WGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTIAV 341



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 143/293 (48%), Gaps = 18/293 (6%)

Query: 348 SNIHMVACGEFHTCAVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
           S + +++ G  HT A+ LSG++  +WG G    G LG        +P  +S  ++  QI 
Sbjct: 13  SRVLLISAGASHTVAL-LSGNVVCSWGRG--EDGQLGHGDTDDRLLPTHLSA-LDAQQID 68

Query: 407 SICCGPWHTAAIT-SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
           SI CG  HT A + S  +L+++G G FG LGHG+ S   +P+ +  L+ L+    +CG  
Sbjct: 69  SIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDS 128

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
           H  A+                ++ +WG    GQLG G +E  +VP  ++    +    VA
Sbjct: 129 HCLAVT------------MEGEVQSWGRNQNGQLGLGTSEDSLVPQKIQTFQGVPIKMVA 176

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAV 585
            G   ++A+T  G+++  G   YG LG      ++      ++    +  +ACG  H   
Sbjct: 177 AGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMVMVACGWRHTIS 236

Query: 586 VSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           VSS   +YT+G    GQLGHG+ E+   P  ++AL DK +  V  G   + A+
Sbjct: 237 VSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMAL 289



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 68/119 (57%), Gaps = 3/119 (2%)

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYH 582
           ++ G S T+AL +   V S G  + GQLG   +  +  PT +   +  + I+ IACG+ H
Sbjct: 18  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSA-LDAQQIDSIACGADH 76

Query: 583 -IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +A   S++E+Y+WG G  G+LGHG++ +   P  + AL+  ++K + CG +   A+ +
Sbjct: 77  TLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTM 135



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           I+CG +H + VT++  +FSWG G+ G+LGHG   D + PK+I+AL+
Sbjct: 331 ISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIEALS 376


>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
           sp. JC66]
          Length = 851

 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/402 (33%), Positives = 217/402 (53%), Gaps = 39/402 (9%)

Query: 262 LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWG 321
            G G+ G      ++   D  + L PK +E   + D Q+IA G+ H++ +TK G ++S+G
Sbjct: 52  FGMGMYG------KLGHGDTANQLAPKKIEG--LSDIQAIAAGTNHSLALTKSGDVYSFG 103

Query: 322 EGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGL 381
            G  G+LGHG       PK I+ L  S+I  +A G+FH+ A+T SGD+Y++G+G   LG 
Sbjct: 104 FGLFGRLGHGNTDSQLEPKKIEGL--SDIQAIAAGDFHSLALTKSGDVYSFGNGTSGLGH 161

Query: 382 LGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS 441
            G   + S   P+K+    +   + +I  G  H+ A+T +G +++FG G FG LGHGD  
Sbjct: 162 -GNTEDQS--TPKKIESLSD---VQAIAAGGNHSLALTKSGDVYSFGFGLFGRLGHGDTD 215

Query: 442 STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH 501
           S   P+++E L +++ + A  G  H+ A+ +            S  ++++G G  GQLGH
Sbjct: 216 SQLEPKKIEDLSDIQAIAA--GGNHSLALTK------------SGDVYSFGWGLHGQLGH 261

Query: 502 GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF- 560
           GD E ++ P  ++   DI        HS+  ALT +G+V+S G  + GQLG   +  +  
Sbjct: 262 GDTENQLTPKKIEDLSDIQAVAAGANHSL--ALTKSGEVYSFGRGNTGQLGHGDTDDQLT 319

Query: 561 PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           P +IEG    + I+ IA G +H   ++   +VY++G G +G LGHGD  N+  P  +E L
Sbjct: 320 PKKIEG---LKDIQAIAAGDFHSLALTKSGDVYSFGNGTSG-LGHGDTANQLEPKKIEGL 375

Query: 621 RDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFR 662
            D  ++++  G+N + A+ + +  S  D    S  +N  N R
Sbjct: 376 TD--IQAIAAGANHSLALAVEEQDSTIDPDEASFDKNILNQR 415



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 110/324 (33%), Positives = 186/324 (57%), Gaps = 30/324 (9%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           +FS+G G  GKLGHG  A+   PK I+ L  S+I  +A G  H+ A+T SGD+Y++G G+
Sbjct: 49  VFSFGMGMYGKLGHGDTANQLAPKKIEGL--SDIQAIAAGTNHSLALTKSGDVYSFGFGL 106

Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
              G LG  +  S   P+K+ G  +   I +I  G +H+ A+T +G +++FG+GT G LG
Sbjct: 107 --FGRLGHGNTDSQLEPKKIEGLSD---IQAIAAGDFHSLALTKSGDVYSFGNGTSG-LG 160

Query: 437 HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
           HG+    S P+++E+L +++ + A  G  H+ A+ +            S  ++++G G  
Sbjct: 161 HGNTEDQSTPKKIESLSDVQAIAA--GGNHSLALTK------------SGDVYSFGFGLF 206

Query: 497 GQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGS 556
           G+LGHGD + ++ P  ++   DI    +A G + ++ALT +G V+S G   +GQLG   +
Sbjct: 207 GRLGHGDTDSQLEPKKIEDLSDIQ--AIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDT 264

Query: 557 TGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPT 615
             +  P +IE       I+ +A G+ H   ++   EVY++G+G  GQLGHGD +++ TP 
Sbjct: 265 ENQLTPKKIE---DLSDIQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQLTPK 321

Query: 616 LVEALRDKQVKSVVCGSNFTAAIC 639
            +E L+D  ++++  G   + A+ 
Sbjct: 322 KIEGLKD--IQAIAAGDFHSLALT 343



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 112/331 (33%), Positives = 177/331 (53%), Gaps = 41/331 (12%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           GDV+ +G GL  G LG           +    L PK +E   + D Q+IA G  H++ +T
Sbjct: 97  GDVYSFGFGL-FGRLG---------HGNTDSQLEPKKIEG--LSDIQAIAAGDFHSLALT 144

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K G ++S+G G+ G LGHG   D S PK I++L  S++  +A G  H+ A+T SGD+Y++
Sbjct: 145 KSGDVYSFGNGTSG-LGHGNTEDQSTPKKIESL--SDVQAIAAGGNHSLALTKSGDVYSF 201

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           G G+   G LG     S   P+K+    +   I +I  G  H+ A+T +G +++FG G  
Sbjct: 202 GFGL--FGRLGHGDTDSQLEPKKIEDLSD---IQAIAAGGNHSLALTKSGDVYSFGWGLH 256

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           G LGHGD  +   P+++E L +++ V A  G  H+ A+ +            S +++++G
Sbjct: 257 GQLGHGDTENQLTPKKIEDLSDIQAVAA--GANHSLALTK------------SGEVYSFG 302

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            G  GQLGHGD + ++ P  ++   DI    +A G   ++ALT +G V+S G+   G LG
Sbjct: 303 RGNTGQLGHGDTDDQLTPKKIEGLKDIQ--AIAAGDFHSLALTKSGDVYSFGNGTSG-LG 359

Query: 553 SPGSTGKF-PTRIEGNIKHRYIEDIACGSYH 582
              +  +  P +IEG      I+ IA G+ H
Sbjct: 360 HGDTANQLEPKKIEGLTD---IQAIAAGANH 387



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 95/166 (57%), Gaps = 20/166 (12%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           GDV+ +G GL +G LG           D  + L PK +E   + D Q++A G+ H++ +T
Sbjct: 246 GDVYSFGWGL-HGQLG---------HGDTENQLTPKKIED--LSDIQAVAAGANHSLALT 293

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K G+++S+G G+ G+LGHG   D   PK I+ L   +I  +A G+FH+ A+T SGD+Y++
Sbjct: 294 KSGEVYSFGRGNTGQLGHGDTDDQLTPKKIEGLK--DIQAIAAGDFHSLALTKSGDVYSF 351

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
           G+G   LG     +++    P+K+ G  +   I +I  G  H+ A+
Sbjct: 352 GNGTSGLGHGDTANQLE---PKKIEGLTD---IQAIAAGANHSLAL 391


>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
          Length = 4853

 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 134/391 (34%), Positives = 196/391 (50%), Gaps = 25/391 (6%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            +DG G ++ WG     G LGG + G ++         LP   ES   L    +A G +  
Sbjct: 3990 WDGSGAIYGWGHN-HRGQLGG-LEGPKVK--------LPAPCESLSALRPIQLAGGEQTL 4039

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT  G+I+S G G+ G+LG G    V  P L++++    I  VA   G  H  A++  
Sbjct: 4040 FAVTADGKIYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSE 4099

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G +Y+WG+G  + G LG  +++S+  P+ +   + G++I  I CG  H+AAITSAG L+T
Sbjct: 4100 GHVYSWGEG--DDGKLGHGNKVSYDRPKLIE-DLLGVEIVDIACGGHHSAAITSAGWLYT 4156

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+ VE L++ K +  +CG          +G           
Sbjct: 4157 WGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACG----------SGDAQTLCVTDDD 4206

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   VPL +     +   KV CG   ++ALT +G V++ G  
Sbjct: 4207 NVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKG 4266

Query: 547  DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            DY +LG          R    ++ + I  IA GS H    S K EV+TWG    GQLG G
Sbjct: 4267 DYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDG 4326

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                   P LV AL+ K++  V CGS  T A
Sbjct: 4327 TTSALHRPRLVHALQGKKITRVACGSAHTLA 4357



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 126/390 (32%), Positives = 205/390 (52%), Gaps = 29/390 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            V++WG    + L  G + G +I         LP   E+   L    IA GSK   +V+++
Sbjct: 3014 VYVWGLNDKDQL--GGLKGSKIK--------LPVYSETLSKLKPIHIAGGSKTLFIVSQE 3063

Query: 315  GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTW 372
            G++++ GEG+ G+LG G + ++  PK I  L+   I  VA   G  H  A+T  G +++W
Sbjct: 3064 GKLYACGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSW 3123

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            G+G    G LG  + IS   P+ +   ++  +I  I CG  H+AAI S G+L+T+G G +
Sbjct: 3124 GEG--EDGKLGHGNCISLDKPKLIE-VLKSKRIRDIACGSGHSAAIASNGELYTWGLGEY 3180

Query: 433  GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTW 491
            G LGHGD  + + P+ V+ L   + V  +CG            + + +  L++   +++W
Sbjct: 3181 GRLGHGDTITQTRPKLVQALIGHRVVQVACG-----------SRDAQTMALTTDGYVYSW 3229

Query: 492  GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
            GDG  G+LG G ++    PL V   +++   +V CG   ++ALT  G+V++ G  DY +L
Sbjct: 3230 GDGDFGKLGRGGSDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRL 3289

Query: 552  GSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            G       + PT +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G    
Sbjct: 3290 GHGNDHHVRKPTLVEG-LRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSV 3348

Query: 611  KQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
             + P+LV  L D +V  V CGS+ + A  L
Sbjct: 3349 NRKPSLVHDLEDARVNRVSCGSSHSIAWVL 3378



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 162/334 (48%), Gaps = 29/334 (8%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE--STVVLDAQSIACGSKHAVL 310
            G ++  GEG  NG LG           D  +   PK +   S  V+   ++  G KHA+ 
Sbjct: 3064 GKLYACGEGT-NGRLG---------LGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALA 3113

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
            +T+ G++FSWGEG  GKLGHG    +  PKLI+ L    I  +ACG  H+ A+  +G+LY
Sbjct: 3114 LTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEVLKSKRIRDIACGSGHSAAIASNGELY 3173

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFG 428
            TWG G    G LG    I+   P+ V   + G ++  + CG     T A+T+ G ++++G
Sbjct: 3174 TWGLG--EYGRLGHGDTITQTRPKLVQALI-GHRVVQVACGSRDAQTMALTTDGYVYSWG 3230

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
            DG FG LG G       P  V+ L  L  +   CG   + A+ +              ++
Sbjct: 3231 DGDFGKLGRGGSDGCYTPLLVDRLNNLGVIQVECGAQFSLALTKYG------------EV 3278

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            +TWG G   +LGHG+      P  V+         VA G    +A+T TGQV++ G  D+
Sbjct: 3279 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDH 3338

Query: 549  GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
            GQ G+  ++      +  +++   +  ++CGS H
Sbjct: 3339 GQQGNGTTSVNRKPSLVHDLEDARVNRVSCGSSH 3372



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 167/327 (51%), Gaps = 37/327 (11%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++ +WG   G K G+G     S P   DA+    I  + C E     ++L+G++Y    G
Sbjct: 500 EVLAWG---GVKFGNG-----STPFYCDAIAELGIKQLCCTERALMILSLNGNVYNMYHG 551

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEG--LQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
                     SE  +  P++V G  +     I+S   G  H  A+T  G ++++G+G  G
Sbjct: 552 ----------SETQY--PQRVHGFSDKPITMIASHADGK-HYLALTQDGCVYSWGNGDGG 598

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
            LGHGD  S   P+ +E L E   +  +CG  ++AA+         +NG    +L+TWG 
Sbjct: 599 RLGHGDTISYDEPKLIEALLEKNIIFIACGSTYSAAL--------SANG----ELYTWGR 646

Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQL 551
           G  G+LGHG+ +  + P  V      +   VACG   S T+ +TA+G VFS G  DYG+L
Sbjct: 647 GNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKL 706

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
           G  G+ G    +I   +    +  + CGS   A +++  EVYTWGKG   +LGHG  E+ 
Sbjct: 707 GRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHV 766

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + P ++E+LRD++VK +  G+    A+
Sbjct: 767 RYPKVIESLRDRKVKDLSVGTTHILAL 793



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 169/357 (47%), Gaps = 27/357 (7%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   ++   L  + + C  +  ++++  G +++   GS          +  YP+ +   +
Sbjct: 515 PFYCDAIAELGIKQLCCTERALMILSLNGNVYNMYHGS----------ETQYPQRVHGFS 564

Query: 347 GSNIHMVA--CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
              I M+A      H  A+T  G +Y+WG+G  + G LG    IS+  P+ +   +E   
Sbjct: 565 DKPITMIASHADGKHYLALTQDGCVYSWGNG--DGGRLGHGDTISYDEPKLIEALLEK-N 621

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           I  I CG  ++AA+++ G+L+T+G G +G LGHG+      P  V TLK    V  +CG 
Sbjct: 622 IIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACG- 680

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
                    +G +      +S  +F+WGDG  G+LG G  +    P  V    DI+  KV
Sbjct: 681 ---------SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKV 731

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHI 583
            CG   + ALTA G+V++ G  D  +LG       ++P  IE +++ R ++D++ G+ HI
Sbjct: 732 FCGSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIE-SLRDRKVKDLSVGTTHI 790

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
             ++    VY WG+   GQ+          PTL   L  K V  +  G   + A C+
Sbjct: 791 LALTEDQFVYGWGRNDYGQIDPTLGPIISEPTLCPTLSSKTVIGLASGPTQSFAWCM 847



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 139/289 (48%), Gaps = 27/289 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WGEG  +G LG   N + +          PK++E       + IACGS H+  + 
Sbjct: 3118 GKVFSWGEG-EDGKLGHG-NCISLDK--------PKLIEVLKSKRIRDIACGSGHSAAIA 3167

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
              G++++WG G  G+LGHG     + PKL+ AL G  +  VACG  +  T A+T  G +Y
Sbjct: 3168 SNGELYTWGLGEYGRLGHGDTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTDGYVY 3227

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+      + P  V  ++  L +  + CG   + A+T  G+++T+G G
Sbjct: 3228 SWGDG--DFGKLGRGGSDGCYTPLLVD-RLNNLGVIQVECGAQFSLALTKYGEVWTWGKG 3284

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +  LGHG+      P  VE L+  K +  + G  H  A+ +              +++ 
Sbjct: 3285 DYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTG------------QVYA 3332

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
            WGD   GQ G+G       P  V   +D    +V+CG S +IA     Q
Sbjct: 3333 WGDNDHGQQGNGTTSVNRKPSLVHDLEDARVNRVSCGSSHSIAWVLVDQ 3381



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 125/266 (46%), Gaps = 29/266 (10%)

Query: 377  HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
            HN+   G   ++  W+ R+                 W T +   +G ++ +G    G LG
Sbjct: 3964 HNIFKQGHDEQLLQWLNRRPED--------------W-TLSWDGSGAIYGWGHNHRGQLG 4008

Query: 437  HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
              +     +P   E+L  L+ +  + G     A+             +  K+++ G GA 
Sbjct: 4009 GLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVT------------ADGKIYSTGYGAA 4056

Query: 497  GQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATGQVFSMGSADYGQLGSP 554
            G+LG G  +  ++P  ++    +   KVA   G    IAL++ G V+S G  D G+LG  
Sbjct: 4057 GRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHG 4116

Query: 555  GSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
                    ++  ++    I DIACG +H A ++S   +YTWGKG  G+LGHGD++++  P
Sbjct: 4117 NKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRP 4176

Query: 615  TLVEALRDKQVKSVVCGSNFTAAICL 640
             +VEAL+D +V  V CGS     +C+
Sbjct: 4177 KVVEALQDYKVIDVACGSGDAQTLCV 4202



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 132/278 (47%), Gaps = 21/278 (7%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GK+
Sbjct: 3993 SGAIYGWG---HNHRGQLGGLEGPKVKLPAPCE-SLSALRPIQLAGGEQTLFAVTADGKI 4048

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            ++ G G  G LG G   S  +P  +E+++   +K V  S G  H  A+            
Sbjct: 4049 YSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALS----------- 4097

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S   +++WG+G +G+LGHG+      P  ++    +    +ACG   + A+T+ G +++
Sbjct: 4098 -SEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYT 4156

Query: 543  MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGAN 600
             G   YG+LG   S  +   ++   ++   + D+ACGS       V+    V++WG G  
Sbjct: 4157 WGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDY 4216

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4217 GKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVAL 4254



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 98/184 (53%), Gaps = 13/184 (7%)

Query: 470 IVEVAGKTSGSNGLSSKK---LFTWGDGAEGQLGHGDA----EPRVVPLCVKVSDDISFC 522
           I  +A    G + L+  +   +++WG+G  G+LGHGD     EP+++   ++   +I F 
Sbjct: 568 ITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLE--KNIIF- 624

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS-- 580
            +ACG + + AL+A G++++ G  +YG+LG           +   +K   +  +ACGS  
Sbjct: 625 -IACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVACGSGD 683

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
                V++   V++WG G  G+LG G  +  +TP +V+ L D  V  V CGS F+AA+  
Sbjct: 684 SQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTA 743

Query: 641 HKGV 644
           H  V
Sbjct: 744 HGEV 747



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 29/218 (13%)

Query: 238  SSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLD 297
            S  +Q  C  D D   +V+ WG+G    L  G  +G ++          P  ++S   L 
Sbjct: 4194 SGDAQTLCVTDDD---NVWSWGDGDYGKLGRGGSDGCKV----------PLKIDSLAGLG 4240

Query: 298  AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
               + CGS+ +V +T+ G +++WG+G   +LGHG +  V  P+ + AL G  I  +A G 
Sbjct: 4241 VVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGS 4300

Query: 358  FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
             H  A +  G+++TWGD  ++ G LG  +  +   PR V   ++G +I+ + CG  HT A
Sbjct: 4301 LHCVACSDKGEVFTWGD--NDEGQLGDGTTSALHRPRLVHA-LQGKKITRVACGSAHTLA 4357

Query: 418  ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
             ++A                  R   S P E + +K+L
Sbjct: 4358 WSTAK-------------ATQSRMPASTPMEYDLVKDL 4382


>gi|308808460|ref|XP_003081540.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
 gi|116060005|emb|CAL56064.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
          Length = 937

 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 135/414 (32%), Positives = 213/414 (51%), Gaps = 49/414 (11%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P  +E    LD   I+ G++H +  T+ G ++SWGEG GGKLG     D   P  +D L+
Sbjct: 236 PSAIEGMETLDVVEISIGARHTLARTRTGAVYSWGEGKGGKLGIPSGQDFDRPTRVD-LD 294

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEIS--HWIPRKV-----SGQ 399
           G  + + +CG  H+ AV + G+++ WGD     GLLG +S++    W P K+     +G 
Sbjct: 295 GRAVAL-SCGSAHSVAV-VEGEVFAWGDPNAAPGLLG-LSDVRSVMWFPGKILFPSATGT 351

Query: 400 MEGLQ-----------ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPRE 448
           +   +           +  + CGP HTA +T  G  +T+G+G+F ALGHGDR S+  PR+
Sbjct: 352 LSAHRGARSLGGGGVKVVQVSCGPCHTACVTETGACYTWGEGSFFALGHGDRESSREPRK 411

Query: 449 VETL-KELKTVM-ASCGVWHTAAIVEVAGKTSGSNGLSSK----------KLFTWGDGAE 496
           +ET  +E + V+  SCGVWHTAAIV  +G +     + +           +LFTWGDG  
Sbjct: 412 LETFTRERRVVLRVSCGVWHTAAIVAASGSSVVRVPVPTNEESEFDSVDGELFTWGDGET 471

Query: 497 GQLGHGDAEPRVVPLCVKVSDDI-----SFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           GQLG  D+    VP   K S+ +       C V+CG   T+ALT+ G ++  G    G++
Sbjct: 472 GQLGIRDSTEAPVP--TKTSNRLGEPGSEVCSVSCGQHHTVALTSQGDLWLAGC--VGKV 527

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            +  S          + +   +  +A G  H+   +  + V++WG G NG+LG G N+  
Sbjct: 528 DN--SLRTTTFTRLTDFETGSVRTVASGENHVVASTRDARVFSWGVGKNGRLGLGRNDRD 585

Query: 612 Q-TPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCR-NQFNFRR 663
           Q  P  +  +R ++V  + CG   T++ C+ +GV +      S  R + F+ R+
Sbjct: 586 QPVPQEIVNMRGREVLHIACGP--TSSACVLRGVQMTIKEKASMARLSTFSIRQ 637



 Score =  105 bits (263), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 170/650 (26%), Positives = 263/650 (40%), Gaps = 122/650 (18%)

Query: 15  EQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGK-EEKQLKLSHVSRIIPGQ 73
           ++A+  +K+G  L+KY    KP       +  E+ L W   + +EK +  S ++R+I G+
Sbjct: 8   DEALTAVKRGASLIKYCTNAKPHV--VYATCTERGLTWVGKRRKEKTIAASAIARVIAGR 65

Query: 74  RTAVFQRYPQPEKEYQ----SFSLIYRN------RSLDLICKDKDEAELWFTALRALISE 123
            T  F+R    + +      SFS++Y +      ++ D +C+ + + +LW  AL  +++E
Sbjct: 66  HTEKFRRRRDGDADADADARSFSVVYEDGSGKASKTWDGVCESECQRDLWVRALERVMAE 125

Query: 124 DNRCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQ---PILVAYE---NSP 177
                +R    S D  R   +      +S  ++   +   G  +   P L   E      
Sbjct: 126 AREDAARR--TSDDGGRREFEDARDGGISIGTAVRVSSAIGKFKVKSPSLREREIQREME 183

Query: 178 QNRLGKAFSEVLSFTAAAKAYT-RAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSA 236
           + R+ +A + V +      A+  RA+   +S     SGG   A S   T    R+   SA
Sbjct: 184 ETRM-RATARVCNVPNETVAWGWRADVTPESAVESVSGGGFAAKSERWT----RVDAPSA 238

Query: 237 VSSSSQGSCHEDFDG---------LGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLP 287
           +         E   G          G V+ WGEG G  L  G  +G +     R D    
Sbjct: 239 IEGMETLDVVEISIGARHTLARTRTGAVYSWGEGKGGKL--GIPSGQDFDRPTRVD---- 292

Query: 288 KVLESTVVLDAQSIA--CGSKHAVLVTKQGQIFSWGE--GSGGKLG-HGVEADVSYPKLI 342
                   LD +++A  CGS H+V V  +G++F+WG+   + G LG   V + + +P  I
Sbjct: 293 --------LDGRAVALSCGSAHSVAVV-EGEVFAWGDPNAAPGLLGLSDVRSVMWFPGKI 343

Query: 343 ---DALNGSNIHMVA--------------CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
               A    + H  A              CG  HT  VT +G  YTWG+G  +   LG  
Sbjct: 344 LFPSATGTLSAHRGARSLGGGGVKVVQVSCGPCHTACVTETGACYTWGEG--SFFALGHG 401

Query: 386 SEISHWIPRKV-SGQMEGLQISSICCGPWHTAAITSA----------------------G 422
              S   PRK+ +   E   +  + CG WHTAAI +A                      G
Sbjct: 402 DRESSREPRKLETFTRERRVVLRVSCGVWHTAAIVAASGSSVVRVPVPTNEESEFDSVDG 461

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKEL-----KTVMASCGVWHTAAIVEVAGKT 477
           +LFT+GDG  G LG   R ST  P   +T   L     +    SCG  HT A+      T
Sbjct: 462 ELFTWGDGETGQLGI--RDSTEAPVPTKTSNRLGEPGSEVCSVSCGQHHTVAL------T 513

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
           S  +         W  G  G++   ++        +   +  S   VA G +  +A T  
Sbjct: 514 SQGD--------LWLAGCVGKV--DNSLRTTTFTRLTDFETGSVRTVASGENHVVASTRD 563

Query: 538 GQVFSMGSADYGQLGSPGSTGKFPTRIE-GNIKHRYIEDIACGSYHIAVV 586
            +VFS G    G+LG   +    P   E  N++ R +  IACG    A V
Sbjct: 564 ARVFSWGVGKNGRLGLGRNDRDQPVPQEIVNMRGREVLHIACGPTSSACV 613


>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
 gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
          Length = 4625

 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 127/390 (32%), Positives = 204/390 (52%), Gaps = 29/390 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG     G LGG   G ++ S        P  +++   L   SIA GSK   +VT  
Sbjct: 2871 VFVWGLN-DKGQLGGC-KGSKVKS--------PTEMKNIAALRPVSIAGGSKTVFIVTYD 2920

Query: 315  GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTW 372
            G+++  GEG+ G+LG G   ++S P  +D LN   +  V    G  H+  +T  G +++W
Sbjct: 2921 GKVYVSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREGKVFSW 2980

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            G+GI   G LG     S   P  +   +E   I  I CG  H+AA+T+ G+L+T+G G +
Sbjct: 2981 GEGID--GKLGHGDVTSRLSPTLIEA-LESKLIVEIACGSSHSAAVTADGELYTWGLGDY 3037

Query: 433  GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK-LFTW 491
            G LGHGD  +  +P++V+ L++ K +  +CG            + + +  L+    +++W
Sbjct: 3038 GRLGHGDSKTLHIPKQVKALQDYKVIDIACG-----------SRDAQTLALTDNNCVWSW 3086

Query: 492  GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
            GDG  G+LG G +E   +P  +        C++ACG   ++AL+ TG+V++ G  DY +L
Sbjct: 3087 GDGDFGKLGRGGSEGCNIPQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRL 3146

Query: 552  GSPG-STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE- 609
            G    S  + P  IEG +K + I +IA G+ H   V+   EVY+WG   +GQ G+G+   
Sbjct: 3147 GHGNDSHYRSPQLIEGPLKKKRITEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNGNTTV 3206

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            NK+    +  L   ++  + CGS+ + A C
Sbjct: 3207 NKRPQICLGELDGVKISHIACGSSHSIAWC 3236



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 120/384 (31%), Positives = 191/384 (49%), Gaps = 25/384 (6%)

Query: 256  FIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQG 315
            ++WG     G LGG V G ++ S        P + +    L   ++A G +   ++T +G
Sbjct: 3773 YVWGHN-HRGQLGG-VQGTKVKS--------PVINDIIAALRPTAVAGGEQTLFILTSEG 3822

Query: 316  QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTWG 373
            ++++ G G  G+LG G   ++  P +I+ L    I  ++   G  H   +T + ++++WG
Sbjct: 3823 KVYASGLGGSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWG 3882

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
            DG    G LG   ++S   PRK+   + G QI  I CG  H+AAITS G+L+T+G G +G
Sbjct: 3883 DG--EDGKLGHGDKLSSETPRKIEALL-GKQIVHISCGSSHSAAITSKGELYTWGKGRYG 3939

Query: 434  ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
             LGHGD      P+ +E LK  K +  +CG          +G            +++WGD
Sbjct: 3940 RLGHGDGDDCLKPKLLEALKSYKVIDVACG----------SGDAQTLAITDDDCVWSWGD 3989

Query: 494  GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS 553
            G  G+LG G ++    PL ++    ++ CKV CG   ++ALT  G +++ G  DY +LG 
Sbjct: 3990 GDYGKLGRGGSDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGH 4049

Query: 554  PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQT 613
              +      R    ++ + I  +A GS H    +   EV+TWG    GQLG+G       
Sbjct: 4050 GTNDHVRRPRKVACLQGKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNPIPE 4109

Query: 614  PTLVEALRDKQVKSVVCGSNFTAA 637
            PTLV  L + ++  V CGS  + A
Sbjct: 4110 PTLVTVLENVKLNRVGCGSAHSFA 4133



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/339 (33%), Positives = 174/339 (51%), Gaps = 37/339 (10%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G V++ GEG  NG LG   N   IS   + D L    ++        ++  G +H++ +T
Sbjct: 2921 GKVYVSGEG-ANGRLGLG-NTENISIPVQLDTLNMHFVKKV------TVHPGGRHSLCIT 2972

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            ++G++FSWGEG  GKLGHG       P LI+AL    I  +ACG  H+ AVT  G+LYTW
Sbjct: 2973 REGKVFSWGEGIDGKLGHGDVTSRLSPTLIEALESKLIVEIACGSSHSAAVTADGELYTW 3032

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDG 430
            G G  + G LG     +  IP++V   ++  ++  I CG     T A+T    ++++GDG
Sbjct: 3033 GLG--DYGRLGHGDSKTLHIPKQVKA-LQDYKVIDIACGSRDAQTLALTDNNCVWSWGDG 3089

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             FG LG G     ++P++++ L        +CG     A   +A  T+G       K++T
Sbjct: 3090 DFGKLGRGGSEGCNIPQKIDALCGRDVCRIACG-----AQFSLALSTTG-------KVWT 3137

Query: 491  WGDGAEGQLGHGD----AEPRVV--PLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            WG G   +LGHG+      P+++  PL  K   +I+   + C     +A+T TG+V+S G
Sbjct: 3138 WGKGDYYRLGHGNDSHYRSPQLIEGPLKKKRITEIAVGALHC-----LAVTDTGEVYSWG 3192

Query: 545  SADYGQLGSPGST-GKFPTRIEGNIKHRYIEDIACGSYH 582
              D+GQ G+  +T  K P    G +    I  IACGS H
Sbjct: 3193 DNDHGQQGNGNTTVNKRPQICLGELDGVKISHIACGSSH 3231



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/341 (33%), Positives = 165/341 (48%), Gaps = 29/341 (8%)

Query: 297  DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG 356
            D  S+  GS H        + + WG    G+LG      V  P + D +       VA G
Sbjct: 3760 DDWSLLWGSNH--------KFYVWGHNHRGQLGGVQGTKVKSPVINDIIAALRPTAVAGG 3811

Query: 357  EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS--SICCGPWH 414
            E     +T  G +Y  G G      +G+   I   +   +   ++ L+I   S+  G  H
Sbjct: 3812 EQTLFILTSEGKVYASGLGGSGRLGIGRSDNI---VTPVIIEPLQHLKIEKLSVHSGGRH 3868

Query: 415  TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
               +TS  ++F++GDG  G LGHGD+ S+  PR++E L   + V  SCG  H+AAI    
Sbjct: 3869 AMVLTSNFEVFSWGDGEDGKLGHGDKLSSETPRKIEALLGKQIVHISCGSSHSAAIT--- 3925

Query: 475  GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITI 532
                     S  +L+TWG G  G+LGHGD +  + P  ++         VACG   + T+
Sbjct: 3926 ---------SKGELYTWGKGRYGRLGHGDGDDCLKPKLLEALKSYKVIDVACGSGDAQTL 3976

Query: 533  ALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            A+T    V+S G  DYG+LG  GS G K P RIE  I     + + CGS     ++   +
Sbjct: 3977 AITDDDCVWSWGDGDYGKLGRGGSDGCKKPLRIESLIGMAVCK-VECGSQFSVALTKNGD 4035

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
            +YTWGKG   +LGHG N++ + P  V  L+ KQ+ +V  GS
Sbjct: 4036 LYTWGKGDYYRLGHGTNDHVRRPRKVACLQGKQIVTVAAGS 4076



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 155/331 (46%), Gaps = 36/331 (10%)

Query: 287  PKVLEST--VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
            P ++E    + ++  S+  G +HA+++T   ++FSWG+G  GKLGHG +     P+ I+A
Sbjct: 3846 PVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSETPRKIEA 3905

Query: 345  LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
            L G  I  ++CG  H+ A+T  G+LYTWG G +  G LG   +    +  K+   ++  +
Sbjct: 3906 LLGKQIVHISCGSSHSAAITSKGELYTWGKGRY--GRLGH-GDGDDCLKPKLLEALKSYK 3962

Query: 405  ISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
            +  + CG     T AIT    ++++GDG +G LG G       P  +E+L  +      C
Sbjct: 3963 VIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGSDGCKKPLRIESLIGMAVCKVEC 4022

Query: 463  GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
            G   + A+ +        NG     L+TWG G   +LGHG  +    P  V         
Sbjct: 4023 GSQFSVALTK--------NG----DLYTWGKGDYYRLGHGTNDHVRRPRKVACLQGKQIV 4070

Query: 523  KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFP----TRIEGNIKHRYIEDIAC 578
             VA G    +A T  G+VF+ G  D GQLG+ G+    P      +  N+K   +  + C
Sbjct: 4071 TVAAGSLHCVACTDAGEVFTWGDNDEGQLGN-GTLNPIPEPTLVTVLENVK---LNRVGC 4126

Query: 579  GSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            GS H          + W   A   +G+  N+
Sbjct: 4127 GSAH---------SFAWSTEAPIDIGYMPNQ 4148



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 144/299 (48%), Gaps = 24/299 (8%)

Query: 287 PKVLESTVVLDAQSIACG--SKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLID 343
           P +L+S + +  + IA     +H + ++  G ++SWG G GG+LGHG   D+   P+L+ 
Sbjct: 502 PVLLDSLIDIKIKKIAANVEGEHYLALSSDGCVYSWGSGDGGRLGHG---DIRREPELVK 558

Query: 344 ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
            L    I  +ACG  ++ AVT +G+LYTWG G  + G LG  +     +P  V+G + G 
Sbjct: 559 ELVNKKITQIACGSTYSAAVTSNGELYTWGRG--SYGRLGHGNSEDRLLPTLVAG-LSGS 615

Query: 404 QISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
            +  + CG    HT AI   G ++++GDG +G LG G      VP+ VETLK        
Sbjct: 616 HVVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKH------- 668

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
               H   IV V   +  S  L     ++TWG     +LGHG  +    P  V+   +  
Sbjct: 669 ----HNKYIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYH 724

Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
              +A G S  +ALT   Q+F+ GS       S  +    PT I   I   +I  +ACG
Sbjct: 725 IVDIAVGPSHCLALTDNCQIFTWGSDVQKYALSSDNYNMEPTCISA-INKEFIAGVACG 782



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 170/353 (48%), Gaps = 40/353 (11%)

Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
           K+ E+   L  + I C S + + +T  G+++S              A    P L+D+L  
Sbjct: 461 KIYETVAELGIKQIMCSSDNIIALTNNGRVYSLA----------YNARCEAPVLLDSLID 510

Query: 348 SNIHMVAC---GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
             I  +A    GE H  A++  G +Y+WG G  + G LG   +I      ++  ++   +
Sbjct: 511 IKIKKIAANVEGE-HYLALSSDGCVYSWGSG--DGGRLGH-GDIRR--EPELVKELVNKK 564

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           I+ I CG  ++AA+TS G+L+T+G G++G LGHG+     +P  V  L     V  +CG 
Sbjct: 565 ITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGS 624

Query: 465 --WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV--SDDIS 520
              HT AI          +G+    +++WGDG  G+LG G ++   VP  V+     +  
Sbjct: 625 GDAHTLAI--------DKDGI----VWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKY 672

Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIAC 578
              V CG   ++AL   G V++ G +D  +LG  G+    ++P  +EG I + +I DIA 
Sbjct: 673 IVNVLCGSQFSVALGKDGTVWTWGKSDGYRLGH-GTLDHVRYPKMVEGLINY-HIVDIAV 730

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
           G  H   ++   +++TWG          DN N + PT + A+  + +  V CG
Sbjct: 731 GPSHCLALTDNCQIFTWGSDVQKYALSSDNYNME-PTCISAINKEFIAGVACG 782



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 165/339 (48%), Gaps = 45/339 (13%)

Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
           L T + ++  WG  +      G E++    K+ + +    I  + C   +  A+T +G +
Sbjct: 435 LSTPKTEVLGWGNINW----LGGESNDGSLKIYETVAELGIKQIMCSSDNIIALTNNGRV 490

Query: 370 YT--WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           Y+  +        LL  + +I     +K++  +EG           H  A++S G ++++
Sbjct: 491 YSLAYNARCEAPVLLDSLIDIK---IKKIAANVEGE----------HYLALSSDGCVYSW 537

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKEL---KTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           G G  G LGHGD     + RE E +KEL   K    +CG  ++AA+         SNG  
Sbjct: 538 GSGDGGRLGHGD-----IRREPELVKELVNKKITQIACGSTYSAAVT--------SNG-- 582

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFS 542
             +L+TWG G+ G+LGHG++E R++P  V          VACG   + T+A+   G V+S
Sbjct: 583 --ELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIVWS 640

Query: 543 MGSADYGQLGSPGSTG-KFPTRIEGNIKH--RYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
            G  DYG+LG  GS   K P  +E  +KH  +YI ++ CGS     +     V+TWGK  
Sbjct: 641 WGDGDYGKLGRGGSDCCKVPKVVE-TLKHHNKYIVNVLCGSQFSVALGKDGTVWTWGKSD 699

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             +LGHG  ++ + P +VE L +  +  +  G +   A+
Sbjct: 700 GYRLGHGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLAL 738



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 142/307 (46%), Gaps = 30/307 (9%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           ++++ +G  +      G V+ WG G G  L  G +         RR+   P++++  V  
Sbjct: 516 IAANVEGEHYLALSSDGCVYSWGSGDGGRLGHGDI---------RRE---PELVKELVNK 563

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  VT  G++++WG GS G+LGHG   D   P L+  L+GS++  VAC 
Sbjct: 564 KITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACG 623

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV-SGQMEGLQISSICCGPW 413
            G+ HT A+   G +++WGDG  + G LG+       +P+ V + +     I ++ CG  
Sbjct: 624 SGDAHTLAIDKDGIVWSWGDG--DYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQ 681

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
            + A+   G ++T+G      LGHG       P+ VE L     V  + G  H  A+ + 
Sbjct: 682 FSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLALTD- 740

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
                      + ++FTWG   +      D    + P C+   +      VACG +    
Sbjct: 741 -----------NCQIFTWGSDVQKYALSSD-NYNMEPTCISAINKEFIAGVACGPAQNFL 788

Query: 534 LTATGQV 540
            T+ G++
Sbjct: 789 WTSGGKL 795



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 114/222 (51%), Gaps = 18/222 (8%)

Query: 423  KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            ++F +G    G LG    S    P E++ +  L+ V  + G   T  IV   GK      
Sbjct: 2870 RVFVWGLNDKGQLGGCKGSKVKSPTEMKNIAALRPVSIAGGS-KTVFIVTYDGK------ 2922

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK---VACGHSITIALTATGQ 539
                 ++  G+GA G+LG G+ E   +P+ +  + ++ F K   V  G   ++ +T  G+
Sbjct: 2923 -----VYVSGEGANGRLGLGNTENISIPVQLD-TLNMHFVKKVTVHPGGRHSLCITREGK 2976

Query: 540  VFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            VFS G    G+LG    T +  PT IE  ++ + I +IACGS H A V++  E+YTWG G
Sbjct: 2977 VFSWGEGIDGKLGHGDVTSRLSPTLIEA-LESKLIVEIACGSSHSAAVTADGELYTWGLG 3035

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD++    P  V+AL+D +V  + CGS     + L
Sbjct: 3036 DYGRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQTLAL 3077



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 131/276 (47%), Gaps = 23/276 (8%)

Query: 369  LYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
             Y WG   HN  G LG V       P  ++  +  L+ +++  G      +TS GK++  
Sbjct: 3772 FYVWG---HNHRGQLGGVQGTKVKSP-VINDIIAALRPTAVAGGEQTLFILTSEGKVYAS 3827

Query: 428  GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL---S 484
            G G  G LG G   +   P  +E L+ LK             I +++  + G + +   S
Sbjct: 3828 GLGGSGRLGIGRSDNIVTPVIIEPLQHLK-------------IEKLSVHSGGRHAMVLTS 3874

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            + ++F+WGDG +G+LGHGD      P  ++         ++CG S + A+T+ G++++ G
Sbjct: 3875 NFEVFSWGDGEDGKLGHGDKLSSETPRKIEALLGKQIVHISCGSSHSAAITSKGELYTWG 3934

Query: 545  SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGANGQ 602
               YG+LG          ++   +K   + D+ACGS       ++    V++WG G  G+
Sbjct: 3935 KGRYGRLGHGDGDDCLKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGK 3994

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G ++  + P  +E+L    V  V CGS F+ A+
Sbjct: 3995 LGRGGSDGCKKPLRIESLIGMAVCKVECGSQFSVAL 4030



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 45/111 (40%), Positives = 68/111 (61%), Gaps = 2/111 (1%)

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
           +AL++ G V+S GS D G+LG  G   + P  ++  + ++ I  IACGS + A V+S  E
Sbjct: 526 LALSSDGCVYSWGSGDGGRLGH-GDIRREPELVK-ELVNKKITQIACGSTYSAAVTSNGE 583

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHK 642
           +YTWG+G+ G+LGHG++E++  PTLV  L    V  V CGS     + + K
Sbjct: 584 LYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDK 634


>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
 gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
          Length = 430

 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 120/349 (34%), Positives = 184/349 (52%), Gaps = 19/349 (5%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK-QGQIFSWGEGSGGKLGHGVE 333
           ++   D  D  LP+++ +    +   +ACG+ H    +  +  I+SWG G  G+LGHG  
Sbjct: 36  QLGHGDAEDRHLPRIIGALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNS 95

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +D+  P  I AL G  I  +ACG+ H  AVT  G++Y+WG   +  G LG        +P
Sbjct: 96  SDLFVPHPIKALQGLEIRQIACGDSHCLAVTADGEVYSWGR--NQNGQLGLGDTDDSLVP 153

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
            K+    EG+ +  +  G  HTAA+T  GKL+ +G G +G LG GDR    +P EV  + 
Sbjct: 154 HKLL-AFEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVG 212

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
           + K  M +CG  HT A+ +            S KL+T+G    GQLGHGD    ++P  V
Sbjct: 213 DEKMCMVACGWRHTIAVSQ------------SGKLYTYGWSKYGQLGHGDYADHLLPHQV 260

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHR 571
               + +  +V+ G   T+ALT  G+++  G   +GQ+GS G       P  I    +H+
Sbjct: 261 AALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGS-GDVDDHTSPQLISIPGQHQ 319

Query: 572 YIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
            +  ++CG  H   V+ K+ VY+WG+G +GQLGHGD  ++  P  ++AL
Sbjct: 320 RVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSAPKGIQAL 368



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 132/273 (48%), Gaps = 27/273 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+V+ WG    NG LG           D  D+L+P  L +   +  + +A G++H   VT
Sbjct: 129 GEVYSWGRNQ-NGQLG---------LGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVT 178

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G+++ WG G  G LG G   D   P  + A+    + MVACG  HT AV+ SG LYT+
Sbjct: 179 DGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLYTY 238

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
             G    G LG      H +P +V+   E   I+ +  G  HT A+T AGKL+ +G   F
Sbjct: 239 --GWSKYGQLGHGDYADHLLPHQVAALAE-FNITQVSGGWRHTVALTEAGKLYGWGWNKF 295

Query: 433 GALGHGDRSSTSVPREVETL-KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           G +G GD    + P+ +    +  + V  SCG  HT A+ +               +++W
Sbjct: 296 GQVGSGDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTD------------KNNVYSW 343

Query: 492 GDGAEGQLGHGDAEPRVVPLCVK-VSDDISFCK 523
           G G  GQLGHGDA  R  P  ++ +S D   C+
Sbjct: 344 GRGTSGQLGHGDAVDRSAPKGIQALSADGKACE 376



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 95/186 (51%), Gaps = 13/186 (6%)

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
           E K ++ S G  HT A+            LS + + ++G G +GQLGHGDAE R +P  +
Sbjct: 4   ERKVLLVSAGASHTVAL------------LSGQVVCSFGRGEDGQLGHGDAEDRHLPRII 51

Query: 514 KVSDDISFCKVACGHSITIALTATG-QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY 572
              +D     VACG   T A +AT   ++S G  D+G+LG   S+  F       ++   
Sbjct: 52  GALNDCEISLVACGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLE 111

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
           I  IACG  H   V++  EVY+WG+  NGQLG GD ++   P  + A     VK +  G+
Sbjct: 112 IRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVKMLAAGA 171

Query: 633 NFTAAI 638
             TAA+
Sbjct: 172 EHTAAV 177


>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
            [Strongylocentrotus purpuratus]
          Length = 4064

 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/391 (32%), Positives = 195/391 (49%), Gaps = 25/391 (6%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            + G G ++ WG     G LGG + G ++         +P  +ES   L    I  G +  
Sbjct: 3177 WGGSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTAIESLTSLRPIQIVGGEQTL 3226

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT  G++++ G G+ G+LG G    VS P L++++   +I  VA   G  H  A+++ 
Sbjct: 3227 FAVTADGKLYATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVE 3286

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G++Y+WG+G    G LG  +      PR +   + G ++  I CG  H+A +TS+G+L+T
Sbjct: 3287 GEVYSWGEG--EDGKLGHGNRTQCDRPRVIE-SLRGKEVIDIACGGAHSACVTSSGELYT 3343

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+  + LK  + +  +CG          +G +         
Sbjct: 3344 WGKGRYGRLGHGDSEDQLRPKMADALKGYRVIDVACG----------SGDSQTLCISDDD 3393

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   VP  V     I  CKV CG   +IALT +G V++ G  
Sbjct: 3394 NVWSWGDGDYGKLGRGGSDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKG 3453

Query: 547  DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            DY +LG          R    ++ + I  IA GS H    S + EVYTWG    GQLG G
Sbjct: 3454 DYHRLGHGSDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLGDG 3513

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P +V AL+DK++ +V CGS  T A
Sbjct: 3514 TTNAIQRPRIVTALQDKKITNVACGSAHTVA 3544



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 198/385 (51%), Gaps = 25/385 (6%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G   G +I +        P + E    L     A GSK   +VT +
Sbjct: 2208 VFVWGLNDKDQL--GGPRGSKIKT--------PVLNEFLSSLKVVCCAGGSKSLFVVTAE 2257

Query: 315  GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTW 372
            G++++ GEG+ G+LG G   +V  PK ++ L+   +  VA   G  H  A+T+ G +++W
Sbjct: 2258 GKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSW 2317

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            G+G  + G LG +S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G +
Sbjct: 2318 GEG--DDGKLGHLSRMNCEKPRLLEA-LKTKRIRDIACGSSHSAAVTSSGELYTWGLGEY 2374

Query: 433  GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            G LGHGD ++   P+ V+ L   + +  +CG      +      T    G+    +++WG
Sbjct: 2375 GRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTL------TLTDEGM----VYSWG 2424

Query: 493  DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            DG  G+LG G +E   VP  V+  +     ++ CG   ++ALT  GQV++ G  DY +LG
Sbjct: 2425 DGDFGKLGRGGSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLG 2484

Query: 553  SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                +     ++   +K + I  +A G+ H   V+   +V+ WG   +GQ G G     +
Sbjct: 2485 HGTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAVTDTGQVFAWGDNDHGQQGDGSTTVNK 2544

Query: 613  TPTLVEALRDKQVKSVVCGSNFTAA 637
             P LV+ L   ++  V CGS+ + A
Sbjct: 2545 KPALVQGLEGVRITRVACGSSHSTA 2569



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 167/329 (50%), Gaps = 19/329 (5%)

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            Q ++F WG     +LG    + +  P L + L+   +   A G      VT  G +Y  G
Sbjct: 2205 QTKVFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSLKVVCCAGGSKSLFVVTAEGKVYACG 2264

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDGTF 432
            +G +  G LG  S  +  IP++V+G  + + +  ++  G  H  A+T  GK+F++G+G  
Sbjct: 2265 EGTN--GRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDD 2322

Query: 433  GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+TWG
Sbjct: 2323 GKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVT------------SSGELYTWG 2370

Query: 493  DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
             G  G+LGHGD+  ++ P  VK        +VACG   + T+ LT  G V+S G  D+G+
Sbjct: 2371 LGEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGK 2430

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG  GS G   P  +E  +  + +  I CG+     ++   +V+TWGKG   +LGHG + 
Sbjct: 2431 LGRGGSEGCSVPHNVE-RLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTDS 2489

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + P + E L+ K++  V  G+    A+
Sbjct: 2490 HVRKPQVAEGLKGKKIIHVAVGALHCLAV 2518



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 153/311 (49%), Gaps = 19/311 (6%)

Query: 287  PKVLESTVVLDAQSIAC--GSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
            P +LES   +  + +A   G KHA+ ++ +G+++SWGEG  GKLGHG       P++I++
Sbjct: 3257 PTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQCDRPRVIES 3316

Query: 345  LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
            L G  +  +ACG  H+  VT SG+LYTWG G +  G LG         P K++  ++G +
Sbjct: 3317 LRGKEVIDIACGGAHSACVTSSGELYTWGKGRY--GRLGHGDSEDQLRP-KMADALKGYR 3373

Query: 405  ISSICCGPW--HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
            +  + CG     T  I+    ++++GDG +G LG G      VP++V+ L  +      C
Sbjct: 3374 VIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKVPQKVDALSSIGVCKVEC 3433

Query: 463  GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
            G   + A+ +            S  ++TWG G   +LGHG  +    P  V         
Sbjct: 3434 GSQFSIALTK------------SGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKKII 3481

Query: 523  KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
             +A G    +A +  G+V++ G  D GQLG   +      RI   ++ + I ++ACGS H
Sbjct: 3482 SIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQRPRIVTALQDKKITNVACGSAH 3541

Query: 583  IAVVSSKSEVY 593
                S+   ++
Sbjct: 3542 TVAWSTSKPLH 3552



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 150/319 (47%), Gaps = 41/319 (12%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WGEG  +G LG            R +   P++LE+      + IACGS H+  VT
Sbjct: 2312 GKVFSWGEG-DDGKLG---------HLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVT 2361

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
              G++++WG G  G+LGHG       PKL+ AL G  +  VACG  +  T  +T  G +Y
Sbjct: 2362 SSGELYTWGLGEYGRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTLTDEGMVY 2421

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+       +P  V  ++ G  +  I CG   + A+T AG+++T+G G
Sbjct: 2422 SWGDG--DFGKLGRGGSEGCSVPHNVE-RLNGQGVIQIECGAQFSLALTKAGQVWTWGKG 2478

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +  LGHG  S    P+  E LK  K +  + G  H  A+ +              ++F 
Sbjct: 2479 DYFRLGHGTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAVTDTG------------QVFA 2526

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATG-------QVF 541
            WGD   GQ G G       P  V+  + +   +VACG  HS   A T T         +F
Sbjct: 2527 WGDNDHGQQGDGSTTVNKKPALVQGLEGVRITRVACGSSHSTAWATTDTAIPSMHEPVLF 2586

Query: 542  S-----MGSADYGQLGSPG 555
            +     +G+ + G  G PG
Sbjct: 2587 TTPRDPLGATELGVFGDPG 2605



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 135/278 (48%), Gaps = 21/278 (7%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P  +   +  L+   I  G     A+T+ GKL
Sbjct: 3180 SGTIYGWG---HNHRGQLGGIEGAKVKVPTAIE-SLTSLRPIQIVGGEQTLFAVTADGKL 3235

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+  V G+      
Sbjct: 3236 YATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALAL-SVEGE------ 3288

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
                 +++WG+G +G+LGHG+      P  ++         +ACG + +  +T++G++++
Sbjct: 3289 -----VYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYT 3343

Query: 543  MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGAN 600
             G   YG+LG   S  +   ++   +K   + D+ACGS       +S    V++WG G  
Sbjct: 3344 WGKGRYGRLGHGDSEDQLRPKMADALKGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDY 3403

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G ++  + P  V+AL    V  V CGS F+ A+
Sbjct: 3404 GKLGRGGSDGCKVPQKVDALSSIGVCKVECGSQFSIAL 3441



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 113/222 (50%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP  +E+L  L+ +              V G+ +  
Sbjct: 3180 SGTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQI------------VGGEQTLF 3227

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  +    P  ++    +   KVA   G    +AL+  G
Sbjct: 3228 AVTADGKLYATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEG 3287

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G  + G+LG    T     R+  +++ + + DIACG  H A V+S  E+YTWGKG
Sbjct: 3288 EVYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKG 3347

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++  P + +AL+  +V  V CGS  +  +C+
Sbjct: 3348 RYGRLGHGDSEDQLRPKMADALKGYRVIDVACGSGDSQTLCI 3389



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/220 (35%), Positives = 103/220 (46%), Gaps = 14/220 (6%)

Query: 423  KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            K+F +G      LG    S    P   E L  LK V  + G   +  +V   GK      
Sbjct: 2207 KVFVWGLNDKDQLGGPRGSKIKTPVLNEFLSSLKVVCCAGGS-KSLFVVTAEGK------ 2259

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATGQV 540
                 ++  G+G  G+LG G ++   +P  V         KVA   G    +ALT  G+V
Sbjct: 2260 -----VYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKV 2314

Query: 541  FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
            FS G  D G+LG          R+   +K + I DIACGS H A V+S  E+YTWG G  
Sbjct: 2315 FSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEY 2374

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            G+LGHGD+  +  P LV+AL  K+V  V CGS     + L
Sbjct: 2375 GRLGHGDSTTQLRPKLVKALVGKRVIQVACGSRDAQTLTL 2414



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 48/108 (44%), Gaps = 13/108 (12%)

Query: 283 DALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPK 340
           D L PK++          IA GS     + VT  G +FS+G G  GKLG G       PK
Sbjct: 4   DQLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPK 63

Query: 341 LIDALNGSNIHMVACGEFHTCAVTLSGDLYT-----------WGDGIH 377
           L+D L G +  +  CG   +  +T +G +YT           W  G+H
Sbjct: 64  LVDKLQGQHAVIACCGNQFSVILTKTGTVYTCLTFAWTSSAHWSVGLH 111



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 29/50 (58%)

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
            T A+T  G LF+FG+G +G LG G      +P+ V+ L+    V+A CG
Sbjct: 30  QTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPKLVDKLQGQHAVIACCG 79



 Score = 43.9 bits (102), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 9/110 (8%)

Query: 503 DAEPRVVPLCVKVSDDISFCKVACGHS--ITIALTATGQVFSMGSADYGQLGSPGSTG-K 559
           +++ ++ P  V    +  F  +A G +   T+A+T TG +FS G+ DYG+LG  GS G K
Sbjct: 1   NSDDQLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCK 60

Query: 560 FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT-----WGKGANGQLG 604
            P  ++  ++ ++     CG+    +++    VYT     W   A+  +G
Sbjct: 61  LPKLVD-KLQGQHAVIACCGNQFSVILTKTGTVYTCLTFAWTSSAHWSVG 109


>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|194702882|gb|ACF85525.1| unknown [Zea mays]
 gi|224030327|gb|ACN34239.1| unknown [Zea mays]
 gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 443

 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/355 (33%), Positives = 191/355 (53%), Gaps = 32/355 (9%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK-QGQIFSWGEGSGGKLGHGVE 333
           ++   D  D L+P VL         S+ CG+ H    ++ + Q++SWG G  G+LGHG  
Sbjct: 44  QLGHGDAEDRLVPTVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNS 103

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +DV  P+ + AL G  I  +ACG+ H  AVT++G++ +WG   +  G LG  +     +P
Sbjct: 104 SDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGR--NQNGQLGLGTTEDSLLP 161

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           +K+    E + +  I  G  HTAA+T  G L+ +G G +G LG GDR+   +P +V +++
Sbjct: 162 QKIQA-FESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVE 220

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
             K V+ +CG  HT  + +            S  L+T+G    GQLGHGD E  +VP  V
Sbjct: 221 GEKMVLVACGWRHTITVSD------------SGNLYTYGWSKYGQLGHGDFEDHLVPHKV 268

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG--------SPGSTGKFPTRIE 565
           +   D +  +++ G   T+ALT+ G+++  G   +GQ+G        SPG    FP    
Sbjct: 269 EALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQV-SFP---- 323

Query: 566 GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
              + + I  +ACG  H   +S K  V++WG+G +GQLG+G+  ++ TP L++AL
Sbjct: 324 ---EDQKISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDAL 375



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 176/364 (48%), Gaps = 30/364 (8%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P     TVVL    ++ G+ H+V +     + SWG G  G+LGHG   D   P ++   +
Sbjct: 8   PDSPPQTVVL----VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFD 63

Query: 347 GSNIHMVACGEFHTCAVTLSG-DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
              I  V CG  HT A +     +Y+WG G  + G LG  +    + P+ V   ++GL+I
Sbjct: 64  APAITSVICGADHTTAYSEDELQVYSWGWG--DFGRLGHGNSSDVFTPQPVKA-LQGLKI 120

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
             I CG  H  A+T AG++ ++G    G LG G    + +P++++  + +   M + G  
Sbjct: 121 KQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAE 180

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
           HTAA+ E               L+ WG G  G LG GD   R++P  V   +      VA
Sbjct: 181 HTAAVTE------------DGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVA 228

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-----PTRIEGNIKHRYIEDIACGS 580
           CG   TI ++ +G +++ G + YGQLG     G F     P ++E  +K   I  I+ G 
Sbjct: 229 CGWRHTITVSDSGNLYTYGWSKYGQLGH----GDFEDHLVPHKVEA-LKDSTISQISGGW 283

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            H   ++S+ ++Y WG    GQ+G G+N++  +P  V    D+++  V CG   T A+  
Sbjct: 284 RHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQKISQVACGWRHTLALSE 343

Query: 641 HKGV 644
            K V
Sbjct: 344 KKNV 347



 Score = 48.1 bits (113), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 33/46 (71%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           +ACG +H + ++++  +FSWG G+ G+LG+G   D + P LIDAL+
Sbjct: 331 VACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALS 376


>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
          Length = 4802

 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/391 (34%), Positives = 196/391 (50%), Gaps = 25/391 (6%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            +DG G ++ WG     G LGG + G ++         LP   ES   L    +A G +  
Sbjct: 3939 WDGSGAIYGWGHN-HRGQLGG-LEGPKVK--------LPAPCESLSALRPIQLAGGEQTL 3988

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT  G+++S G G+ G+LG G    V  P L++++    I  VA   G  H  A++  
Sbjct: 3989 FAVTADGKVYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSE 4048

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G +Y+WG+G  + G LG  +++S+  P+ +   + G++I  I CG  H+AAITSAG L+T
Sbjct: 4049 GHVYSWGEG--DDGKLGHGNKMSYDRPKLIE-DLLGVEIIDIACGGHHSAAITSAGWLYT 4105

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+ VE L++ K +  +CG          +G           
Sbjct: 4106 WGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACG----------SGDAQTLCVTDDD 4155

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   VPL +     +   KV CG   ++ALT +G V++ G  
Sbjct: 4156 NVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKG 4215

Query: 547  DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            DY +LG          R    ++ + I  IA GS H    S K EV+TWG    GQLG G
Sbjct: 4216 DYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDG 4275

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                   P LV AL+ K++  V CGS  T A
Sbjct: 4276 TTSALHRPRLVHALQGKKITRVACGSAHTLA 4306



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/389 (33%), Positives = 204/389 (52%), Gaps = 27/389 (6%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            V++WG    + L  G + G +I         LP   E    L    IA GSK   +V+++
Sbjct: 2963 VYVWGLNDKDQL--GGLKGSKIK--------LPVYSEVLSKLKPIHIAGGSKTLFIVSQE 3012

Query: 315  GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTW 372
            G++++ GEG+ G+LG G + +V  PK I  L+   I  VA   G  H  A+T  G +++W
Sbjct: 3013 GKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSW 3072

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            G+G    G LG  + +S   P+ +   ++  +I  I CG  H+AAI S G+L+T+G G +
Sbjct: 3073 GEG--EDGKLGHGNNMSLDKPKLIE-TLKSKRIRDIACGSGHSAAIASNGELYTWGLGEY 3129

Query: 433  GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            G LGHGD  + + P+ V+TL   + V  +CG   +     +A  T G        +++WG
Sbjct: 3130 GRLGHGDTVTQARPKLVQTLVGHRVVQVACG---SRDAQTMALTTDGC-------VYSWG 3179

Query: 493  DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            DG  G+LG G ++    PL V+  + +   +V CG   ++ALT  G+V++ G  DY +LG
Sbjct: 3180 DGDFGKLGRGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLG 3239

Query: 553  SPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
                   + PT +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G     
Sbjct: 3240 HGNDHHVRKPTLVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVN 3298

Query: 612  QTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            + P+LV  L D +V  V CGS+ + A  L
Sbjct: 3299 RKPSLVHELEDARVNRVSCGSSHSIAWVL 3327



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/327 (33%), Positives = 168/327 (51%), Gaps = 37/327 (11%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++ +WG   G K G+G     S P   DA+    I  + C E     ++L+G++Y    G
Sbjct: 441 EVLAWG---GVKFGNG-----STPFYCDAIAELGIKQLCCTERALMILSLNGNVYNMYHG 492

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGL--QISSICCGPWHTAAITSAGKLFTFGDGTFG 433
                     SE  +  P++V G  + L   I+S   G  H  A+T  G ++++G+G  G
Sbjct: 493 ----------SETQY--PQRVHGFSDKLVTMIASHSDGK-HHLALTQDGCVYSWGNGDGG 539

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
            LGHGD  S   P+ +E L E   V  +CG  ++AA+  V+G+           L+TWG 
Sbjct: 540 RLGHGDTVSYDEPKLIEALLEKNIVFIACGSTYSAAL-SVSGE-----------LYTWGR 587

Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQL 551
           G  G+LGHG+ +  ++P  V      +   VACG   S T+ +TA+G VFS G  DYG+L
Sbjct: 588 GNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKL 647

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
           G  G+ G    +I   +    +  + CGS   A +++  EVYTWGKG   +LGHG  E+ 
Sbjct: 648 GRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHV 707

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + P ++E+LRDK++K +  G+     +
Sbjct: 708 RYPKIIESLRDKKIKDLSVGATHILVL 734



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 161/334 (48%), Gaps = 29/334 (8%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE--STVVLDAQSIACGSKHAVL 310
            G ++  GEG  NG LG           D  +   PK +   S  V+   ++  G KHA+ 
Sbjct: 3013 GKLYACGEGT-NGRLG---------LGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALA 3062

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
            +T+ G++FSWGEG  GKLGHG    +  PKLI+ L    I  +ACG  H+ A+  +G+LY
Sbjct: 3063 LTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHSAAIASNGELY 3122

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFG 428
            TWG G    G LG    ++   P+ V   + G ++  + CG     T A+T+ G ++++G
Sbjct: 3123 TWGLG--EYGRLGHGDTVTQARPKLVQ-TLVGHRVVQVACGSRDAQTMALTTDGCVYSWG 3179

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
            DG FG LG G       P  VE L  L  V   CG   + A+ +              ++
Sbjct: 3180 DGDFGKLGRGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYG------------EV 3227

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            +TWG G   +LGHG+      P  V+         VA G    +A+T TGQV++ G  D+
Sbjct: 3228 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDH 3287

Query: 549  GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
            GQ G+  ++      +   ++   +  ++CGS H
Sbjct: 3288 GQQGNGTTSVNRKPSLVHELEDARVNRVSCGSSH 3321



 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 162/328 (49%), Gaps = 15/328 (4%)

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            ++  ++ WG     +LG    + +  P   + L+      +A G      V+  G LY  
Sbjct: 2959 QESAVYVWGLNDKDQLGGLKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYAC 3018

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            G+G +    LG  + +    P     Q   ++  ++  G  H  A+T  GK+F++G+G  
Sbjct: 3019 GEGTNGRLGLGDDNNVCEPKPIPFLSQFV-IKKVAVHSGGKHALALTQDGKVFSWGEGED 3077

Query: 433  GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            G LGHG+  S   P+ +ETLK  +    +CG  H+AAI         SNG    +L+TWG
Sbjct: 3078 GKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHSAAI--------ASNG----ELYTWG 3125

Query: 493  DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
             G  G+LGHGD   +  P  V+        +VACG   + T+ALT  G V+S G  D+G+
Sbjct: 3126 LGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGK 3185

Query: 551  LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            LG  GS G +   +   +    +  + CG+     ++   EV+TWGKG   +LGHG++ +
Sbjct: 3186 LGRGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHH 3245

Query: 611  KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             + PTLVE LR K++  V  G+    A+
Sbjct: 3246 VRKPTLVEGLRGKKIVHVAVGALHCLAV 3273



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 173/358 (48%), Gaps = 29/358 (8%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   ++   L  + + C  +  ++++  G +++   GS          +  YP+ +   +
Sbjct: 456 PFYCDAIAELGIKQLCCTERALMILSLNGNVYNMYHGS----------ETQYPQRVHGFS 505

Query: 347 GSNIHMVAC---GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
              + M+A    G+ H  A+T  G +Y+WG+G  + G LG    +S+  P+ +   +E  
Sbjct: 506 DKLVTMIASHSDGKHH-LALTQDGCVYSWGNG--DGGRLGHGDTVSYDEPKLIEALLEK- 561

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
            I  I CG  ++AA++ +G+L+T+G G +G LGHG+     +P  V TLK    V  +CG
Sbjct: 562 NIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVACG 621

Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
                     +G +      +S  +F+WGDG  G+LG G  +    P  V    DI+  K
Sbjct: 622 ----------SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVK 671

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYH 582
           V CG   + ALTA G+V++ G  D  +LG       ++P  IE +++ + I+D++ G+ H
Sbjct: 672 VFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIE-SLRDKKIKDLSVGATH 730

Query: 583 IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           I V++    VY WG+   GQ+          PTL   L  K V  +  G   + A C+
Sbjct: 731 ILVLTEDQFVYGWGRNDYGQIDPTLGSVISEPTLCPTLSSKTVIGLASGPTQSFAWCM 788



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 141/289 (48%), Gaps = 27/289 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WGEG  +G LG   N     S D+     PK++E+      + IACGS H+  + 
Sbjct: 3067 GKVFSWGEG-EDGKLGHGNN----MSLDK-----PKLIETLKSKRIRDIACGSGHSAAIA 3116

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
              G++++WG G  G+LGHG     + PKL+  L G  +  VACG  +  T A+T  G +Y
Sbjct: 3117 SNGELYTWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVY 3176

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+      + P  V  ++ GL +  + CG   + A+T  G+++T+G G
Sbjct: 3177 SWGDG--DFGKLGRGGSDGCYTPLVVE-RLNGLGVVQVECGAQFSLALTKYGEVWTWGKG 3233

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +  LGHG+      P  VE L+  K V  + G  H  A+ +              +++ 
Sbjct: 3234 DYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTG------------QVYA 3281

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
            WGD   GQ G+G       P  V   +D    +V+CG S +IA     Q
Sbjct: 3282 WGDNDHGQQGNGTTSVNRKPSLVHELEDARVNRVSCGSSHSIAWVLVDQ 3330



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 142/288 (49%), Gaps = 31/288 (10%)

Query: 229 FRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK 288
           F   L + ++S S G  H      G V+ WG G G G LG   +G  +S  +      PK
Sbjct: 504 FSDKLVTMIASHSDGKHHLALTQDGCVYSWGNGDG-GRLG---HGDTVSYDE------PK 553

Query: 289 VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
           ++E+ +  +   IACGS ++  ++  G++++WG G+ G+LGHG   DV  P L+  L G 
Sbjct: 554 LIEALLEKNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGH 613

Query: 349 NIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
            +  VAC  G+  T  VT SG +++WGDG  + G LG+        P K+  ++  + + 
Sbjct: 614 TVVHVACGSGDSQTLCVTASGIVFSWGDG--DYGKLGRGGTDGSKTP-KIVDKLLDINVV 670

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            + CG   +AA+T+ G+++T+G G    LGHG       P+ +E+L++ K    S G  H
Sbjct: 671 KVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDLSVGATH 730

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ----LGHGDAEPRVVP 510
              + E             + ++ WG    GQ    LG   +EP + P
Sbjct: 731 ILVLTE------------DQFVYGWGRNDYGQIDPTLGSVISEPTLCP 766



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 131/281 (46%), Gaps = 30/281 (10%)

Query: 363  VTLSGDL-YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            + + GD  YT     HN+   G   ++  W+ R+                 W T +   +
Sbjct: 3898 MAMDGDTEYTKDHENHNIFKQGHDEQLLQWLNRRPED--------------W-TLSWDGS 3942

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            G ++ +G    G LG  +     +P   E+L  L+ +  + G     A+           
Sbjct: 3943 GAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVT---------- 3992

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATGQ 539
              +  K+++ G GA G+LG G  +  ++P  ++    +   KVA   G    +AL++ G 
Sbjct: 3993 --ADGKVYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGH 4050

Query: 540  VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
            V+S G  D G+LG          ++  ++    I DIACG +H A ++S   +YTWGKG 
Sbjct: 4051 VYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGR 4110

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
             G+LGHGD++++  P +VEAL+D +V  V CGS     +C+
Sbjct: 4111 YGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCV 4151



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 132/278 (47%), Gaps = 21/278 (7%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GK+
Sbjct: 3942 SGAIYGWG---HNHRGQLGGLEGPKVKLPAPCE-SLSALRPIQLAGGEQTLFAVTADGKV 3997

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            ++ G G  G LG G   S  +P  +E+++   +K V  S G  H  A+            
Sbjct: 3998 YSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALS----------- 4046

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S   +++WG+G +G+LGHG+      P  ++    +    +ACG   + A+T+ G +++
Sbjct: 4047 -SEGHVYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYT 4105

Query: 543  MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGAN 600
             G   YG+LG   S  +   ++   ++   + D+ACGS       V+    V++WG G  
Sbjct: 4106 WGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDY 4165

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4166 GKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVAL 4203



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 119/249 (47%), Gaps = 32/249 (12%)

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE-LKTVMAS 461
           L I  +CC        T    +    +G    + HG  S T  P+ V    + L T++AS
Sbjct: 465 LGIKQLCC--------TERALMILSLNGNVYNMYHG--SETQYPQRVHGFSDKLVTMIAS 514

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA----EPRVVPLCVKVSD 517
               H+     +A    G        +++WG+G  G+LGHGD     EP+++   ++   
Sbjct: 515 ----HSDGKHHLALTQDGC-------VYSWGNGDGGRLGHGDTVSYDEPKLIEALLE--K 561

Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIA 577
           +I F  +ACG + + AL+ +G++++ G  +YG+LG           +   +K   +  +A
Sbjct: 562 NIVF--IACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVA 619

Query: 578 CGS--YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           CGS       V++   V++WG G  G+LG G  +  +TP +V+ L D  V  V CGS F+
Sbjct: 620 CGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFS 679

Query: 636 AAICLHKGV 644
           AA+  H  V
Sbjct: 680 AALTAHGEV 688



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 29/218 (13%)

Query: 238  SSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLD 297
            S  +Q  C  D D   +V+ WG+G    L  G  +G ++          P  ++S   L 
Sbjct: 4143 SGDAQTLCVTDDD---NVWSWGDGDYGKLGRGGSDGCKV----------PLKIDSLAGLG 4189

Query: 298  AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
               + CGS+ +V +T+ G +++WG+G   +LGHG +  V  P+ + AL G  I  +A G 
Sbjct: 4190 VIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGS 4249

Query: 358  FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
             H  A +  G+++TWGD  ++ G LG  +  +   PR V   ++G +I+ + CG  HT A
Sbjct: 4250 LHCVACSDKGEVFTWGD--NDEGQLGDGTTSALHRPRLVHA-LQGKKITRVACGSAHTLA 4306

Query: 418  ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
             ++A                  R   S P E + +K+L
Sbjct: 4307 WSTAK-------------ATQSRMPASTPMEYDLVKDL 4331


>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 341

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/366 (34%), Positives = 186/366 (50%), Gaps = 28/366 (7%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           VF WG G  +G LG           D  D   P  +++   +  Q IACGS H V++T  
Sbjct: 2   VFTWGRGE-DGQLG---------LGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTD 51

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           G++F+WG G  G+LGHG       P++  +L G  +  V CG +HT AVT +GDLYTWG 
Sbjct: 52  GEVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGG 111

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
           G++  G LG   E  H  P++V   + G  ++ I CG  HTA +T++G L+T+GD   G 
Sbjct: 112 GMY--GKLGHGDEAGHATPKRVE-ALVGATVAQIACGSRHTAIVTASGALYTWGDKENGV 168

Query: 435 LGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
            GHG+      +PR +E++   +    S   +HTA + +            + +LFTWG+
Sbjct: 169 AGHGETEGHQYLPRLLESMAAKRVAQISACGFHTAIVTD------------AGELFTWGE 216

Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS 553
           G  G+LGH        P  V         +V+CG   T  ++  G++++ G  ++GQLG 
Sbjct: 217 GKFGRLGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGH 276

Query: 554 PGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                K  PT +E  +   ++  I CG  H   ++ K  VYTWG G +G+LGHG+     
Sbjct: 277 NDRVNKMTPTFVE-ALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGNGRKVA 335

Query: 613 TPTLVE 618
            P  VE
Sbjct: 336 VPQAVE 341



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/330 (35%), Positives = 168/330 (50%), Gaps = 26/330 (7%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           +F+WG G  G+LG G  +D   P  +DAL G  +  +ACG  HT  +T  G+++TWG G 
Sbjct: 2   VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRG- 60

Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
            + G LG       ++PR     + G  +  + CG +HTAA+T  G L+T+G G +G LG
Sbjct: 61  -DDGRLGHGDNGWKYVPRMTQ-SLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLG 118

Query: 437 HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
           HGD +  + P+ VE L        +CG  HTA +             +S  L+TWGD   
Sbjct: 119 HGDEAGHATPKRVEALVGATVAQIACGSRHTAIVT------------ASGALYTWGDKEN 166

Query: 497 GQLGHGDAE-----PRVVP-LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G  GHG+ E     PR++  +  K    IS    ACG    I +T  G++F+ G   +G+
Sbjct: 167 GVAGHGETEGHQYLPRLLESMAAKRVAQIS----ACGFHTAI-VTDAGELFTWGEGKFGR 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG           I   +  +    ++CG +H AVVS    +YT+G G +GQLGH D  N
Sbjct: 222 LGHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVN 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           K TPT VEAL    V  + CG + + A+ +
Sbjct: 282 KMTPTFVEALDGMFVSQITCGWSHSVALTV 311



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 10/126 (7%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++F WGEG   G LG             R+   P +++  V    + ++CG  H  +V+
Sbjct: 209 GELFTWGEGK-FGRLG---------HMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVS 258

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           + G+++++G G  G+LGH    +   P  ++AL+G  +  + CG  H+ A+T+ G +YTW
Sbjct: 259 EDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEALDGMFVSQITCGWSHSVALTVKGLVYTW 318

Query: 373 GDGIHN 378
           G+G H 
Sbjct: 319 GNGDHG 324


>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
 gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
 gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
 gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/351 (33%), Positives = 192/351 (54%), Gaps = 22/351 (6%)

Query: 275 EISSADRRDALLPKVLES--TVVLDAQSIACGSKHAVLVTK-QGQIFSWGEGSGGKLGHG 331
           ++   D  D L+P VL           S+ CG+ H    ++ + Q++SWG G  G+LGHG
Sbjct: 53  QLGHGDAEDRLVPTVLSGFDAAAPGITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHG 112

Query: 332 VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHW 391
             +DV  P+ + AL G  I  +ACG+ H  AVT++G++ +WG   +  G LG  +     
Sbjct: 113 NSSDVFTPQPVKALQGIKIKQIACGDSHCLAVTMAGEVQSWGR--NQNGQLGLGTTEDSL 170

Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
           +P+K+    EG+ +  I  G  HTAA+T  G L+ +G G +G LG GDR+   VP +V +
Sbjct: 171 LPQKIQ-SFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSS 229

Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPL 511
           ++  K V+ +CG  HT  +             SS  L+T+G    GQLGHGD E  +VP 
Sbjct: 230 VEGEKMVLIACGWRHTITVS------------SSGSLYTYGWSKYGQLGHGDFEDHLVPH 277

Query: 512 CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIK 569
            ++   D S  +++ G   T+ALT+ G+++  G   +GQ+G  G T    FP +++   +
Sbjct: 278 KLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGV-GDTDDHCFPVQVK-FPE 335

Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
            + +  +ACG  H    + K  V++WG+G +GQLGHG+  ++  P +++AL
Sbjct: 336 DQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLGHGEIVDRNKPVMIDAL 386



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 171/352 (48%), Gaps = 28/352 (7%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS--NIHMVACGEF 358
           ++ G+ H+V +     + SWG G  G+LGHG   D   P ++   + +   I  V CG  
Sbjct: 27  VSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGAD 86

Query: 359 HTCAVTLS-GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           HT A +     +Y+WG G  + G LG  +    + P+ V   ++G++I  I CG  H  A
Sbjct: 87  HTTAYSEDEQQVYSWGWG--DFGRLGHGNSSDVFTPQPVKA-LQGIKIKQIACGDSHCLA 143

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +T AG++ ++G    G LG G    + +P+++++ + +   M + G  HTAA+ E     
Sbjct: 144 VTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTE----- 198

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
                     L+ WG G  G LG GD   R+VP  V   +      +ACG   TI ++++
Sbjct: 199 -------DGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITVSSS 251

Query: 538 GQVFSMGSADYGQLGSPGSTGKF-----PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
           G +++ G + YGQLG     G F     P ++E  +K   I  I+ G  H   ++S  ++
Sbjct: 252 GSLYTYGWSKYGQLGH----GDFEDHLVPHKLEA-LKDSSISQISGGWRHTMALTSDGKL 306

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           Y WG    GQ+G GD ++   P  V+   D++V  V CG   T A    K V
Sbjct: 307 YGWGWNKFGQVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEKKNV 358



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 136/291 (46%), Gaps = 16/291 (5%)

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG-QMEGLQISSI 408
           + +V+ G  H+ A+     L +WG G    G LG        +P  +SG       I+S+
Sbjct: 24  VVLVSAGASHSVALLAGNVLCSWGRG--EDGQLGHGDAEDRLVPTVLSGFDAAAPGITSV 81

Query: 409 CCGPWHTAAIT-SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
            CG  HT A +    +++++G G FG LGHG+ S    P+ V+ L+ +K    +CG  H 
Sbjct: 82  ICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSHC 141

Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
            A V +AG+             +WG    GQLG G  E  ++P  ++  + +    +A G
Sbjct: 142 LA-VTMAGEVQ-----------SWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAG 189

Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
              T A+T  G ++  G   YG LG      +       +++   +  IACG  H   VS
Sbjct: 190 AEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMVLIACGWRHTITVS 249

Query: 588 SKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           S   +YT+G    GQLGHGD E+   P  +EAL+D  +  +  G   T A+
Sbjct: 250 SSGSLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHTMAL 300



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 89/174 (51%), Gaps = 3/174 (1%)

Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS--FCKVA 525
           A ++  AG +     L+   L +WG G +GQLGHGDAE R+VP  +   D  +     V 
Sbjct: 23  AVVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVI 82

Query: 526 CGHSITIALTAT-GQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIA 584
           CG   T A +    QV+S G  D+G+LG   S+  F  +    ++   I+ IACG  H  
Sbjct: 83  CGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSHCL 142

Query: 585 VVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            V+   EV +WG+  NGQLG G  E+   P  +++     VK +  G+  TAA+
Sbjct: 143 AVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAV 196



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 39/72 (54%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           ++   D  D   P  ++         +ACG +H +  T++  +FSWG G+ G+LGHG   
Sbjct: 316 QVGVGDTDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLGHGEIV 375

Query: 335 DVSYPKLIDALN 346
           D + P +IDAL+
Sbjct: 376 DRNKPVMIDALS 387


>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
            rotundata]
          Length = 4755

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/391 (32%), Positives = 197/391 (50%), Gaps = 25/391 (6%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            +DG G ++ WG     G LGG + G ++         LP + ES   L    +  G +  
Sbjct: 3892 WDGSGAIYGWGHN-HRGQLGG-LEGAKVK--------LPVLCESLSALRPVQLTGGEQTL 3941

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT  G++++ G G+ G+LG G    V  P L++++    +  VA   G  H  A++  
Sbjct: 3942 FAVTADGKVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSE 4001

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G +Y+WG+G  + G LG  + +S+  P+ +  ++ G +I  + CG  H+AAITSAG L+T
Sbjct: 4002 GHVYSWGEG--DDGKLGHGNRLSYDRPKLIE-ELLGTEIVDVACGGHHSAAITSAGWLYT 4058

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+ VE L++ K +  +CG          +G           
Sbjct: 4059 WGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACG----------SGDAQTLCVTDDD 4108

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   VP+ ++    +   KV CG   ++ALT +G +++ G  
Sbjct: 4109 NVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKG 4168

Query: 547  DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            DY +LG          R    ++ + I  IA GS H    S K EV+TWG    GQLG G
Sbjct: 4169 DYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDG 4228

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K++  V CGS  T A
Sbjct: 4229 TTCALQRPRLVHALQGKKITRVACGSAHTLA 4259



 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 203/389 (52%), Gaps = 27/389 (6%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            V++WG    + L  G + G +I         LP   ES   L    IA GSK   +V+++
Sbjct: 2911 VYVWGLNDKDQL--GGLKGSKIK--------LPVYSESLSKLKPVHIAGGSKTLFVVSQE 2960

Query: 315  GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTW 372
            G++++ GEG+ G+LG G + +   PK I  L+   I  VA   G  H  A+T  G +++W
Sbjct: 2961 GKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFSW 3020

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            G+G    G LG  +  S   PR +   ++  +I  + CG  H+AAITS+G+L+T+G G +
Sbjct: 3021 GEG--EDGKLGHGNCSSLDKPRLIE-SLKSKRIRDVACGSGHSAAITSSGELYTWGLGEY 3077

Query: 433  GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            G LGHGD ++   P+ V++L   + +  +CG      +   A    GS       +++WG
Sbjct: 3078 GRLGHGDTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTA---DGS-------VYSWG 3127

Query: 493  DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            DG  G+LG G ++    PL V   + +   ++ CG   ++ALT  G+V++ G  DY +LG
Sbjct: 3128 DGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLG 3187

Query: 553  SPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
                   + PT +EG ++ + +  +A G+ H   V+   +VY WG   +GQ G+G     
Sbjct: 3188 HGNDHHVRKPTLVEG-LRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVN 3246

Query: 612  QTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            + P+LV  L D +V  V CGS+ + A  L
Sbjct: 3247 KKPSLVHELDDARVNRVSCGSSHSIAWVL 3275



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/336 (33%), Positives = 168/336 (50%), Gaps = 33/336 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE--STVVLDAQSIACGSKHAVL 310
            G ++  GEG  NG LG   +G         +A  PK +   S  V+   ++  G KHA+ 
Sbjct: 2961 GKLYACGEGT-NGRLGLGDDG---------NACEPKPIPFLSQYVIKKVAVHSGGKHALA 3010

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
            +T+ G++FSWGEG  GKLGHG  + +  P+LI++L    I  VACG  H+ A+T SG+LY
Sbjct: 3011 LTQDGRVFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITSSGELY 3070

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFG 428
            TWG G    G LG     +   P+ V   + G ++  + CG     T A+T+ G ++++G
Sbjct: 3071 TWGLG--EYGRLGHGDTNTQLKPKLVQ-SLVGQRVIQVACGSRDAQTMALTADGSVYSWG 3127

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
            DG FG LG G       P  V+ L  L  V   CG   + A+ +              ++
Sbjct: 3128 DGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYG------------EV 3175

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            +TWG G   +LGHG+      P  V+         VA G    +A+T TGQV++ G  D+
Sbjct: 3176 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDH 3235

Query: 549  GQLGSPGST--GKFPTRIEGNIKHRYIEDIACGSYH 582
            GQ G+ GST   K P+ +   +    +  ++CGS H
Sbjct: 3236 GQQGN-GSTIVNKKPSLVH-ELDDARVNRVSCGSSH 3269



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 162/327 (49%), Gaps = 36/327 (11%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++ +WG    G  G       S P   DA+    I  + C E     ++ SG++Y    G
Sbjct: 437 EVLAWGSVKFGGTG-------SSPFYCDAIAELGIKQLCCTERALMILSTSGNVYMMYYG 489

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
                     SE  +  P++V G  +   ++ I   P   H  A+T    ++++G+G  G
Sbjct: 490 ----------SETQY--PQRVYGFSDKF-VAMIASHPDGKHYLALTEDSSVYSWGNGDGG 536

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
            LGHGDR+    P+ +E+L +      +CG  ++AA+         SNG    +L+TWG 
Sbjct: 537 RLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAAL--------SSNG----ELYTWGR 584

Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQL 551
           G  G+LGHG+++  +VP  V   +      VACG   S T+ +TA+G VFS G  DYG+L
Sbjct: 585 GNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKL 644

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
           G  G  G    +I   +    +  + CG    A +++  EVYTWGKG   +LGHG+ E+ 
Sbjct: 645 GRGGCNGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHV 704

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + P  +EAL+ K+VK +  GS    A+
Sbjct: 705 RYPKAIEALKTKKVKELCVGSLHVLAL 731



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 143/289 (49%), Gaps = 27/289 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WGEG  +G LG        SS D+     P+++ES      + +ACGS H+  +T
Sbjct: 3015 GRVFSWGEG-EDGKLGHG----NCSSLDK-----PRLIESLKSKRIRDVACGSGHSAAIT 3064

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
              G++++WG G  G+LGHG       PKL+ +L G  +  VACG  +  T A+T  G +Y
Sbjct: 3065 SSGELYTWGLGEYGRLGHGDTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVY 3124

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+      + P  V  ++ GL +  I CG   + A+T  G+++T+G G
Sbjct: 3125 SWGDG--DFGKLGRGGSDGCYTPLLVD-RLNGLGVVQIECGAQFSLALTKYGEVWTWGKG 3181

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +  LGHG+      P  VE L+  K +  + G  H  A+ +              +++ 
Sbjct: 3182 DYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDTG------------QVYA 3229

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
            WGD   GQ G+G       P  V   DD    +V+CG S +IA   T Q
Sbjct: 3230 WGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQ 3278



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 163/356 (45%), Gaps = 27/356 (7%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   ++   L  + + C  +  ++++  G ++    GS          +  YP+ +   +
Sbjct: 453 PFYCDAIAELGIKQLCCTERALMILSTSGNVYMMYYGS----------ETQYPQRVYGFS 502

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
              + M+A      H  A+T    +Y+WG+G  + G LG      +  P+ +   ++   
Sbjct: 503 DKFVAMIASHPDGKHYLALTEDSSVYSWGNG--DGGRLGHGDRTWYEEPKLIESLVDK-N 559

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           I+ I CG  ++AA++S G+L+T+G G +G LGHG+     VP  V  L     V  +CG 
Sbjct: 560 ITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACG- 618

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
                    +G +      +S  +F+WGDG  G+LG G       P  V    DI+  KV
Sbjct: 619 ---------SGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDINVAKV 669

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHI 583
            CG   + ALTA G+V++ G  +  +LG       ++P  IE  +K + ++++  GS H+
Sbjct: 670 YCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHVRYPKAIEA-LKTKKVKELCVGSLHV 728

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
             ++    VY WG+   GQ+          PTL   L  K V  +VCG   + A C
Sbjct: 729 LALTEDQLVYGWGRNDYGQIDPALGTIVSEPTLCPTLSGKNVIGLVCGPTQSFAWC 784



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 130/262 (49%), Gaps = 31/262 (11%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           V+ WG G          +G  +   DR     PK++ES V  +   IACGS ++  ++  
Sbjct: 527 VYSWGNG----------DGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALSSN 576

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTW 372
           G++++WG G+ G+LGHG   DV  P L+ ALNG  I  VAC  G+  T  VT SG +++W
Sbjct: 577 GELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSW 636

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           GDG  + G LG+        P K+  ++  + ++ + CG   +AA+T+ G+++T+G G  
Sbjct: 637 GDG--DYGKLGRGGCNGSKTP-KIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEA 693

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
             LGHG+      P+ +E LK  K      G  H  A+ E             + ++ WG
Sbjct: 694 YRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTE------------DQLVYGWG 741

Query: 493 DGAEGQ----LGHGDAEPRVVP 510
               GQ    LG   +EP + P
Sbjct: 742 RNDYGQIDPALGTIVSEPTLCP 763



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 112/222 (50%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   +P   E+L  L+ V  + G     A+          
Sbjct: 3895 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVT--------- 3945

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  K++  G GA G+LG G  +  ++P  ++    +   KVA   G    +AL++ G
Sbjct: 3946 ---ADGKVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 4002

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
             V+S G  D G+LG          ++   +    I D+ACG +H A ++S   +YTWGKG
Sbjct: 4003 HVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKG 4062

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++ TP LVEAL+D +V  V CGS     +C+
Sbjct: 4063 RYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCV 4104



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 131/278 (47%), Gaps = 21/278 (7%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P  +   +  L+   +  G     A+T+ GK+
Sbjct: 3895 SGAIYGWG---HNHRGQLGGLEGAKVKLP-VLCESLSALRPVQLTGGEQTLFAVTADGKV 3950

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKEL--KTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S  +P  +E+++ +  K V  + G  H  A+            
Sbjct: 3951 YATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALS----------- 3999

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S   +++WG+G +G+LGHG+      P  ++         VACG   + A+T+ G +++
Sbjct: 4000 -SEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYT 4058

Query: 543  MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGAN 600
             G   YG+LG   S  +   ++   ++   + D+ACGS       V+    V++WG G  
Sbjct: 4059 WGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDY 4118

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G ++  + P  +E+L    V  V CGS F+ A+
Sbjct: 4119 GKLGRGGSDGCKVPMKIESLAGLGVIKVECGSQFSVAL 4156



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 64/109 (58%)

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
           +ALT    V+S G+ D G+LG    T     ++  ++  + I  IACGS + A +SS  E
Sbjct: 519 LALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALSSNGE 578

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           +YTWG+G  G+LGHG++++   PTLV AL    +  V CGS  +  +C+
Sbjct: 579 LYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCV 627



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 24/180 (13%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG+G    L  G  NG +           PK+++  + ++   + CG + +  +T
Sbjct: 631 GIVFSWGDGDYGKLGRGGCNGSKT----------PKIVDKLLDINVAKVYCGGQFSAALT 680

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G++++WG+G   +LGHG E  V YPK I+AL    +  +  G  H  A+T    +Y W
Sbjct: 681 AYGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVGSLHVLALTEDQLVYGW 740

Query: 373 GD---GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP-----WHTAAITSAGKL 424
           G    G  +  L   VSE +      +   + G  +  + CGP     W T+A + A ++
Sbjct: 741 GRNDYGQIDPALGTIVSEPT------LCPTLSGKNVIGLVCGPTQSFAWCTSAWSVASRV 794


>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 441

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/348 (33%), Positives = 188/348 (54%), Gaps = 18/348 (5%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK-QGQIFSWGEGSGGKLGHGVE 333
           ++   D  D L+P V+         S+ CG+ H    ++ + Q++SWG G  G+LGHG  
Sbjct: 45  QLGHGDAEDRLVPTVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNS 104

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
            DV  P+ + AL G  I  +ACG+ H  AVT++G++ +WG   +  G LG  +     +P
Sbjct: 105 TDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGR--NQNGQLGLGTTEDSLLP 162

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           + +    EG+ +  I  G  HTAA+T  G ++ +G G +G LG GDR+   VP +V +++
Sbjct: 163 QTIQ-AFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVE 221

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
             K V+ +CG  HT  +             SS  L+T+G    GQLGHGD E  +VP  V
Sbjct: 222 GDKMVLVACGWRHTITVS------------SSGSLYTYGWSKYGQLGHGDFEDHLVPHKV 269

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNI-KHRY 572
           +   D S  +++ G   T+ALT+ G+++  G   +GQ+G+ G      +  + N  + + 
Sbjct: 270 EALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGA-GDNADHCSPAQVNFPEEQK 328

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           +  +ACG  H    + K  V+ WG+G +GQLGHG+  ++ TP +++AL
Sbjct: 329 VAQVACGWRHTLAFTEKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 376



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 174/371 (46%), Gaps = 33/371 (8%)

Query: 283 DALLPKVLEST---VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
           DA L  V +     VVL    ++ G+ H+V +     + +WG G  G+LGHG   D   P
Sbjct: 2   DAALSAVADEAPPAVVL----VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVP 57

Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLS-GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
            +I   +   I  V CG  HT A +     +Y+WG G  + G LG  +    + P+ V  
Sbjct: 58  TVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWG--DFGRLGHGNSTDVFTPQPVK- 114

Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV 458
            ++G++I  + CG  H  A+T AG++ ++G    G LG G    + +P+ ++  + +   
Sbjct: 115 ALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVK 174

Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
           M + G  HTAA+ E               ++ WG G  G LG GD   R VP  V   + 
Sbjct: 175 MIAAGAEHTAAVTE------------DGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEG 222

Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-----PTRIEGNIKHRYI 573
                VACG   TI ++++G +++ G + YGQLG     G F     P ++E  +K    
Sbjct: 223 DKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGH----GDFEDHLVPHKVEA-LKDSST 277

Query: 574 EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSN 633
             I+ G  H   ++S  ++Y WG    GQ+G GDN +  +P  V    +++V  V CG  
Sbjct: 278 SQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWR 337

Query: 634 FTAAICLHKGV 644
            T A    K V
Sbjct: 338 HTLAFTEKKNV 348



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 39/72 (54%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           ++ + D  D   P  +          +ACG +H +  T++  +F+WG G+ G+LGHG   
Sbjct: 306 QVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQLGHGEIV 365

Query: 335 DVSYPKLIDALN 346
           D + P +IDAL+
Sbjct: 366 DRNTPVIIDALS 377


>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
          Length = 5118

 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/391 (32%), Positives = 197/391 (50%), Gaps = 25/391 (6%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            +DG G ++ WG     G LGG + G ++         LP + ES   L    +  G +  
Sbjct: 4255 WDGSGAIYGWGHN-HRGQLGG-LEGAKVK--------LPVLCESLSALRPVQLTGGEQTL 4304

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
            + VT  G++++ G G+ G+LG G    V  P L++++    +  VA   G  H  A++  
Sbjct: 4305 LAVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE 4364

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G +Y+WG+G  + G LG  + + +  P+ +  ++ G +I  I CG  H+AAITSAG L+T
Sbjct: 4365 GHVYSWGEG--DDGKLGHGNRLMYDRPKLIE-ELLGTEIVDIACGGHHSAAITSAGWLYT 4421

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+ VE L++ K +  +CG          +G           
Sbjct: 4422 WGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACG----------SGDAQTLCVTDDD 4471

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   +P+ ++    +   KV CG   ++ALT +G +++ G  
Sbjct: 4472 NVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKG 4531

Query: 547  DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            DY +LG          R    ++ + I  IA GS H    + K EV+TWG    GQLG G
Sbjct: 4532 DYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDG 4591

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K++  V CGS  T A
Sbjct: 4592 TTSALQRPRLVHALQGKKITRVACGSAHTLA 4622



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 128/398 (32%), Positives = 209/398 (52%), Gaps = 27/398 (6%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            V++WG    + L  G + G +I         LP   E    L    IA GSK   +V+++
Sbjct: 3256 VYVWGLNDKDQL--GGLKGSKIK--------LPVYSEVLSKLKPIHIAGGSKTLFVVSQE 3305

Query: 315  GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTW 372
            G++++ GEG+ G+LG G +++V  PKLI  L+   I  VA   G  H  A+T  G +++W
Sbjct: 3306 GKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKIFSW 3365

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            G+G    G LG  + +S   PR +   ++  +I  I CG  H+AAITS+G+L+T+G G +
Sbjct: 3366 GEG--EDGKLGHGNSVSLDKPRLIES-LKSKRIRDIACGSGHSAAITSSGELYTWGLGEY 3422

Query: 433  GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            G LGHGD ++   P+ V++L   + +  +CG      +   A    GS       +++WG
Sbjct: 3423 GRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTA---DGS-------VYSWG 3472

Query: 493  DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            DG  G+LG G ++    PL +   + +   ++ CG   ++ALT  G+V++ G  DY +LG
Sbjct: 3473 DGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLG 3532

Query: 553  SPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
                   + PT +EG ++ + +  +A G+ H   V+   +VY WG   +GQ G+G     
Sbjct: 3533 HGNDHHVRKPTLVEG-LRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVN 3591

Query: 612  QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADH 649
            + P+LV  L D +V  V CGS+ + A  L    +  +H
Sbjct: 3592 KKPSLVHELDDARVNRVSCGSSHSIAWVLTDQPATNNH 3629



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 166/336 (49%), Gaps = 33/336 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE--STVVLDAQSIACGSKHAVL 310
            G ++  GEG  NG LG           D  +   PK++   S  ++   ++  G KHA+ 
Sbjct: 3306 GKLYACGEG-TNGRLG---------LGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALA 3355

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
            +T+ G+IFSWGEG  GKLGHG    +  P+LI++L    I  +ACG  H+ A+T SG+LY
Sbjct: 3356 LTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELY 3415

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFG 428
            TWG G    G LG     +   P+ V   + G ++  + CG     T A+T+ G ++++G
Sbjct: 3416 TWGLG--EYGRLGHGDTATQMKPKLVQ-SLVGQRVIQVACGSRDAQTMALTADGSVYSWG 3472

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
            DG FG LG G       P  ++ L  L  V   CG   + A+ +              ++
Sbjct: 3473 DGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYG------------EV 3520

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            +TWG G   +LGHG+      P  V+         VA G    +A+T TGQV++ G  D+
Sbjct: 3521 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDH 3580

Query: 549  GQLGSPGST--GKFPTRIEGNIKHRYIEDIACGSYH 582
            GQ G+ GST   K P+ +   +    +  ++CGS H
Sbjct: 3581 GQQGN-GSTIVNKKPSLVH-ELDDARVNRVSCGSSH 3614



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 143/289 (49%), Gaps = 27/289 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G +F WGEG  +G LG   N V +          P+++ES      + IACGS H+  +T
Sbjct: 3360 GKIFSWGEG-EDGKLGHG-NSVSLDK--------PRLIESLKSKRIRDIACGSGHSAAIT 3409

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
              G++++WG G  G+LGHG  A    PKL+ +L G  +  VACG  +  T A+T  G +Y
Sbjct: 3410 SSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVY 3469

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+      + P  +  ++ GL +  I CG   + A+T  G+++T+G G
Sbjct: 3470 SWGDG--DFGKLGRGGSDGCYTPLLID-RLNGLGVVQIECGAQFSLALTKYGEVWTWGKG 3526

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +  LGHG+      P  VE L+  K V  + G  H  A+ +              +++ 
Sbjct: 3527 DYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTG------------QVYA 3574

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
            WGD   GQ G+G       P  V   DD    +V+CG S +IA   T Q
Sbjct: 3575 WGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQ 3623



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 151/300 (50%), Gaps = 30/300 (10%)

Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
           P   DA+    I  + C E     +++SG++Y    G          SE  +  P++V G
Sbjct: 444 PFYCDAIAELGIKQLCCTERALMILSISGNVYMMYYG----------SETQY--PQRVYG 491

Query: 399 QMEG--LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK 456
             E     I+S   G  H  A+T    ++++G+G  G LGHGDR     P+ VE L +  
Sbjct: 492 FSEKPVTMIASHSDGT-HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKN 550

Query: 457 TVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
               +CG  ++A +         SNG    +L+TWG G  G+LGHG+++  ++P  V   
Sbjct: 551 ITFIACGSTYSAVL--------SSNG----ELYTWGRGNYGRLGHGNSDNVLIPTLVTAL 598

Query: 517 DDISFCKVACG--HSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIE 574
           +      VACG   S T+ +TA+G VFS G  +YG+LG  G  G    +I   +    + 
Sbjct: 599 NGHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVA 658

Query: 575 DIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNF 634
            + CG    A +++  EVYTWGKG   +LGHG+ E+ + P ++E L+ K+VK  +C  NF
Sbjct: 659 KVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKE-LCVGNF 717



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 139/276 (50%), Gaps = 19/276 (6%)

Query: 307 HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
           H + +T+   ++SWG G GG+LGHG       PKL++AL   NI  +ACG  ++  ++ +
Sbjct: 508 HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSN 567

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW--HTAAITSAGKL 424
           G+LYTWG G  N G LG  +  +  IP  V+  + G  +  + CG     T  +T++G +
Sbjct: 568 GELYTWGRG--NYGRLGHGNSDNVLIPTLVTA-LNGHMVVYVACGSGDSQTLCVTASGIV 624

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           F++GDG +G LG G    +  P+ V+ L ++      CG   +AA+              
Sbjct: 625 FSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYG---------- 674

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
             +++TWG G   +LGHG+ E    P  ++V       ++  G+   +ALT    V+  G
Sbjct: 675 --EVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTEDQLVYGWG 732

Query: 545 SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACG 579
             DYGQ+  + G+    PT +   +  + I  +ACG
Sbjct: 733 RNDYGQIDPALGTIVPEPT-LCPTLSGKNIIGLACG 767



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 165/356 (46%), Gaps = 27/356 (7%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   ++   L  + + C  +  ++++  G ++    GS          +  YP+ +   +
Sbjct: 444 PFYCDAIAELGIKQLCCTERALMILSISGNVYMMYYGS----------ETQYPQRVYGFS 493

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
              + M+A      H  A+T    +Y+WG+G  + G LG    + +  P+ V   ++   
Sbjct: 494 EKPVTMIASHSDGTHYLALTQDSSVYSWGNG--DGGRLGHGDRVWYDEPKLVEALVDK-N 550

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           I+ I CG  ++A ++S G+L+T+G G +G LGHG+  +  +P  V  L     V  +CG 
Sbjct: 551 ITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACG- 609

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
                    +G +      +S  +F+WGDG  G+LG G  +    P  V    DI+  KV
Sbjct: 610 ---------SGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKV 660

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHI 583
            CG   + ALTA G+V++ G  +  +LG       ++P  IE  +K + ++++  G++H+
Sbjct: 661 YCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIE-VLKPKKVKELCVGNFHV 719

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
             ++    VY WG+   GQ+          PTL   L  K +  + CG   + A C
Sbjct: 720 LALTEDQLVYGWGRNDYGQIDPALGTIVPEPTLCPTLSGKNIIGLACGLTQSFAWC 775



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 139/282 (49%), Gaps = 31/282 (10%)

Query: 235 SAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTV 294
           + ++S S G+ +        V+ WG G          +G  +   DR     PK++E+ V
Sbjct: 498 TMIASHSDGTHYLALTQDSSVYSWGNG----------DGGRLGHGDRVWYDEPKLVEALV 547

Query: 295 VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA 354
             +   IACGS ++ +++  G++++WG G+ G+LGHG   +V  P L+ ALNG  +  VA
Sbjct: 548 DKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVA 607

Query: 355 C--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
           C  G+  T  VT SG +++WGDG  N G LG+        P K+  ++  + ++ + CG 
Sbjct: 608 CGSGDSQTLCVTASGIVFSWGDG--NYGKLGRGGCDGSKTP-KIVDKLLDINVAKVYCGG 664

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
             +AA+T+ G+++T+G G    LGHG+      P+ +E LK  K      G +H  A+ E
Sbjct: 665 QFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHVLALTE 724

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQ----LGHGDAEPRVVP 510
                        + ++ WG    GQ    LG    EP + P
Sbjct: 725 ------------DQLVYGWGRNDYGQIDPALGTIVPEPTLCP 754



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 112/222 (50%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   +P   E+L  L+ V  + G     A+          
Sbjct: 4258 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVT--------- 4308

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  K++  G GA G+LG G  +  +VP  ++    +   KVA   G    +AL++ G
Sbjct: 4309 ---ADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 4365

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
             V+S G  D G+LG          ++   +    I DIACG +H A ++S   +YTWGKG
Sbjct: 4366 HVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKG 4425

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++ TP LVEAL+D +V  V CGS     +C+
Sbjct: 4426 RYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCV 4467



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 131/278 (47%), Gaps = 21/278 (7%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P  +   +  L+   +  G     A+T+ GK+
Sbjct: 4258 SGAIYGWG---HNHRGQLGGLEGAKVKLP-VLCESLSALRPVQLTGGEQTLLAVTADGKV 4313

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKEL--KTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S  VP  +E+++ +  K V  + G  H  A+            
Sbjct: 4314 YATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALS----------- 4362

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S   +++WG+G +G+LGHG+      P  ++         +ACG   + A+T+ G +++
Sbjct: 4363 -SEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYT 4421

Query: 543  MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGAN 600
             G   YG+LG   S  +   ++   ++   + D+ACGS       V+    V++WG G  
Sbjct: 4422 WGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDY 4481

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G ++  + P  +E+L    V  V CGS F+ A+
Sbjct: 4482 GKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVAL 4519



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 63/109 (57%)

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
           +ALT    V+S G+ D G+LG          ++   +  + I  IACGS + AV+SS  E
Sbjct: 510 LALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGE 569

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           +YTWG+G  G+LGHG+++N   PTLV AL    V  V CGS  +  +C+
Sbjct: 570 LYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYVACGSGDSQTLCV 618


>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
 gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
          Length = 794

 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 129/346 (37%), Positives = 185/346 (53%), Gaps = 28/346 (8%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           IACG +H V+VT+ G++F++G    G+LG G     + P  + AL    I  VA G FHT
Sbjct: 40  IACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGRFHT 99

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            AVT S  LY++G G    G LG   E    +P  +   +E   ++ I CG +H+AAIT 
Sbjct: 100 LAVTDSNKLYSFGQGSE--GALGHGDETDLNMPTSIE-SLEDKDVNIIACGGYHSAAITK 156

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            G+L+ +G  + G LG  +  + S P  ++  K + +V  +CG +HTA +          
Sbjct: 157 NGELYIWGSNSEGQLGLKN-DTISYPTMLDLGKSVISV--ACGYYHTAVVT--------- 204

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVV--PLCVK-VSDDISFCKVACGHSITIALTAT 537
              +  KL+T+G+   G+LG GD E   V  P  VK +S  +   KVACG + T+ALTA+
Sbjct: 205 ---ADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKV--VKVACGGNHTVALTAS 259

Query: 538 GQVFSMGSADYGQ--LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
           GQV++ GS   GQ  LGS       P  +E  +  R I+ IACG  H AVVS K E++T+
Sbjct: 260 GQVYTFGSGQNGQLGLGSKIMDSNIPKLVEA-LSKRKIKHIACGESHTAVVSDKGELFTF 318

Query: 596 GKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
           G G +G+LG GD    N   P  V+ L++  V  + CG   T   C
Sbjct: 319 GDGRHGKLGQGDESFSNLFKPVKVQRLKEFIVLHIACGGCHTIVAC 364



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 167/319 (52%), Gaps = 40/319 (12%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           +A G  H + VT   +++S+G+GS G LGHG E D++ P  I++L   +++++ACG +H+
Sbjct: 92  VAAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDLNMPTSIESLEDKDVNIIACGGYHS 151

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T +G+LY WG   ++ G LG  ++   + P  +     G  + S+ CG +HTA +T+
Sbjct: 152 AAITKNGELYIWGS--NSEGQLGLKNDTISY-PTMLD---LGKSVISVACGYYHTAVVTA 205

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSV--PREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
            GKL+TFG+   G LG GD  +  V  P+ V+ +   K V  +CG  HT A+        
Sbjct: 206 DGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISG-KVVKVACGGNHTVALT------- 257

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDA-EPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
                +S +++T+G G  GQLG G       +P  V+         +ACG S T  ++  
Sbjct: 258 -----ASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVVSDK 312

Query: 538 GQVFSMGSADYGQLGSPGSTGKF-----PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
           G++F+ G   +G+LG    +  F     P +++  +K   +  IACG  H  V  +K + 
Sbjct: 313 GELFTFGDGRHGKLGQGDES--FSNLFKPVKVQ-RLKEFIVLHIACGGCHTIVACNKID- 368

Query: 593 YTWGKGANGQLGHGDNENK 611
                    +L +GD++N+
Sbjct: 369 ---------KLANGDDDNE 378



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 128/237 (54%), Gaps = 18/237 (7%)

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
           +++ I CG  HT  +T  G+LFTFG+  +G LG G   + + P  V+ LK  K    + G
Sbjct: 36  KVTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAG 95

Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
            +HT A+ +            S KL+++G G+EG LGHGD     +P  ++  +D     
Sbjct: 96  RFHTLAVTD------------SNKLYSFGQGSEGALGHGDETDLNMPTSIESLEDKDVNI 143

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHI 583
           +ACG   + A+T  G+++  GS   GQLG    T  +PT ++     + +  +ACG YH 
Sbjct: 144 IACGGYHSAAITKNGELYIWGSNSEGQLGLKNDTISYPTMLDLG---KSVISVACGYYHT 200

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQT--PTLVEALRDKQVKSVVCGSNFTAAI 638
           AVV++  ++YT+G+   G+LG GD E  +   P +V+ +  K VK V CG N T A+
Sbjct: 201 AVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVK-VACGGNHTVAL 256



 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 134/260 (51%), Gaps = 20/260 (7%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D  D  +P  +ES    D   IACG  H+  +TK G+++ WG  S G+LG   +  
Sbjct: 119 LGHGDETDLNMPTSIESLEDKDVNIIACGGYHSAAITKNGELYIWGSNSEGQLGLKNDT- 177

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRK 395
           +SYP ++D   G ++  VACG +HT  VT  G LYT+G+       LG +       P+ 
Sbjct: 178 ISYPTMLDL--GKSVISVACGYYHTAVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKV 235

Query: 396 VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKE 454
           V G + G ++  + CG  HT A+T++G+++TFG G  G LG G +   +++P+ VE L +
Sbjct: 236 VKG-ISG-KVVKVACGGNHTVALTASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEALSK 293

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV--PLC 512
            K    +CG  HTA + +              +LFT+GDG  G+LG GD     +  P+ 
Sbjct: 294 RKIKHIACGESHTAVVSDKG------------ELFTFGDGRHGKLGQGDESFSNLFKPVK 341

Query: 513 VKVSDDISFCKVACGHSITI 532
           V+   +     +ACG   TI
Sbjct: 342 VQRLKEFIVLHIACGGCHTI 361



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 10/105 (9%)

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
           +  TG VF+ G + +G       T KF  R +       + DIACG  H  VV+    ++
Sbjct: 8   IPETGAVFTFGKSRFGD----NRTNKFWIRSD------KVTDIACGDEHTVVVTENGRLF 57

Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           T+G    GQLG G N+ +  PT V+AL+ +++  V  G   T A+
Sbjct: 58  TFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGRFHTLAV 102



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 82/186 (44%), Gaps = 18/186 (9%)

Query: 192 TAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE-DFD 250
           TA  K YT  E+    L      GL D  +   T       +S  V   + G  H     
Sbjct: 204 TADGKLYTFGETEGGKL------GLGDIEAHKVTKPKVVKGISGKVVKVACGGNHTVALT 257

Query: 251 GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
             G V+ +G G  NG LG    G +I      D+ +PK++E+      + IACG  H  +
Sbjct: 258 ASGQVYTFGSGQ-NGQLGL---GSKIM-----DSNIPKLVEALSKRKIKHIACGESHTAV 308

Query: 311 VTKQGQIFSWGEGSGGKLGHGVE--ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           V+ +G++F++G+G  GKLG G E  +++  P  +  L    +  +ACG  HT       D
Sbjct: 309 VSDKGELFTFGDGRHGKLGQGDESFSNLFKPVKVQRLKEFIVLHIACGGCHTIVACNKID 368

Query: 369 LYTWGD 374
               GD
Sbjct: 369 KLANGD 374


>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Apis florea]
          Length = 4812

 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/391 (32%), Positives = 197/391 (50%), Gaps = 25/391 (6%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            +DG G ++ WG     G LGG + G ++         LP + ES   L    +  G +  
Sbjct: 3949 WDGSGAIYGWGHN-HRGQLGG-LEGAKVK--------LPVLCESLSALRPVQLTGGEQTL 3998

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT  G++++ G G+ G+LG G    V  P L++++    +  VA   G  H  A++  
Sbjct: 3999 FAVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE 4058

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G +Y+WG+G  + G LG  + +S+  P+ +  ++ G +I  I CG  H+AAITSAG L+T
Sbjct: 4059 GHVYSWGEG--DDGKLGHGNRLSYDRPKLIE-ELLGTEIVDIACGGHHSAAITSAGWLYT 4115

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+ +E L++ K +  +CG          +G           
Sbjct: 4116 WGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACG----------SGDAQTLCVTDDD 4165

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   +P+ ++    +   KV CG   ++ALT +G +++ G  
Sbjct: 4166 NVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKG 4225

Query: 547  DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            DY +LG          R    ++ + I  IA GS H    + K EV+TWG    GQLG G
Sbjct: 4226 DYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDG 4285

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K++  V CGS  T A
Sbjct: 4286 TTSALQRPRLVHALQGKKITRVACGSAHTLA 4316



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 127/389 (32%), Positives = 207/389 (53%), Gaps = 27/389 (6%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            V++WG    + L  G + G +I         LP   E    L    IA GSK   +V+++
Sbjct: 2936 VYVWGLNDKDQL--GGLKGSKIK--------LPVYSEVLSKLKPVHIAGGSKTLFVVSQE 2985

Query: 315  GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTW 372
            G++++ GEG+ G+LG G +++V  PK I  L+   I  V+   G  H  A+T  G +++W
Sbjct: 2986 GKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSW 3045

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            G+G    G LG  + IS   PR +   ++  +I  I CG  H+AAITS+G+L+T+G G +
Sbjct: 3046 GEG--EDGKLGHGNSISLDKPRLIES-LKSKRIRDIACGSGHSAAITSSGELYTWGLGEY 3102

Query: 433  GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            G LGHGD ++ S P+ V++L   + +  +CG      +   A      +GL    +++WG
Sbjct: 3103 GRLGHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTA------DGL----VYSWG 3152

Query: 493  DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            DG  G+LG G ++    PL +   + +   ++ CG   ++ALT  G+V++ G  DY +LG
Sbjct: 3153 DGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLG 3212

Query: 553  SPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
                   + PT +EG ++ + +  +A G+ H   V+   +VY WG   +GQ G+G     
Sbjct: 3213 HGNDHHVRKPTLVEG-LRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVN 3271

Query: 612  QTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            + P+LV  L D +V  V CGS+ + A  L
Sbjct: 3272 KKPSLVHELDDARVNRVSCGSSHSIAWVL 3300



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 111/336 (33%), Positives = 164/336 (48%), Gaps = 33/336 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE--STVVLDAQSIACGSKHAVL 310
            G ++  GEG  NG LG           D  +   PK +   S  V+   S+  G KHA+ 
Sbjct: 2986 GKLYACGEG-TNGRLG---------LGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALA 3035

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
            +T+ G++FSWGEG  GKLGHG    +  P+LI++L    I  +ACG  H+ A+T SG+LY
Sbjct: 3036 LTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELY 3095

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFG 428
            TWG G    G LG     +   P+ V   + G +I  I CG     T A+T+ G ++++G
Sbjct: 3096 TWGLG--EYGRLGHGDTATQSKPKLVQS-LVGQRIIQIACGSRDAQTMALTADGLVYSWG 3152

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
            DG FG LG G       P  ++ L  L  V   CG   + A+ +              ++
Sbjct: 3153 DGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYG------------EV 3200

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            +TWG G   +LGHG+      P  V+         VA G    +A+T  GQV++ G  D+
Sbjct: 3201 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDH 3260

Query: 549  GQLGSPGST--GKFPTRIEGNIKHRYIEDIACGSYH 582
            GQ G+ G+T   K P+ +   +    +  ++CGS H
Sbjct: 3261 GQQGN-GTTIVNKKPSLVH-ELDDARVNRVSCGSSH 3294



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/289 (34%), Positives = 148/289 (51%), Gaps = 27/289 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WGEG  +G LG   +G  IS  D+     P+++ES      + IACGS H+  +T
Sbjct: 3040 GKVFSWGEG-EDGKLG---HGNSIS-LDK-----PRLIESLKSKRIRDIACGSGHSAAIT 3089

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
              G++++WG G  G+LGHG  A  S PKL+ +L G  I  +ACG  +  T A+T  G +Y
Sbjct: 3090 SSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVY 3149

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+      + P  +  ++ GL +  I CG   + A+T  G+++T+G G
Sbjct: 3150 SWGDG--DFGKLGRGGSDGCYTPLLID-RLNGLGVVQIECGAQFSLALTKYGEVWTWGKG 3206

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +  LGHG+      P  VE L+  K +  + G  H  A+ ++             +++ 
Sbjct: 3207 DYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDIG------------QVYA 3254

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
            WGD   GQ G+G       P  V   DD    +V+CG S +IA   T Q
Sbjct: 3255 WGDNDHGQQGNGTTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQ 3303



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 170/348 (48%), Gaps = 44/348 (12%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++ +WG     KLG+G     S P   D +    I  + C E     ++++G++Y    G
Sbjct: 437 EVIAWG---SVKLGNG-----SSPFYYDTIAELGIKQLCCTERALMILSVNGNVYMMYYG 488

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEG--LQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
                     SE  +  P++V G  E   + I+S   G  H  A+T    ++++G+G  G
Sbjct: 489 ----------SETQY--PQRVYGFSEKPIIMIASHSDGT-HYLALTQDNSVYSWGNGDGG 535

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
            LGHGDR+    P+ +E L E      +CG  ++AA+         SNG    +L+TWG 
Sbjct: 536 RLGHGDRAWYDEPKLIEALVEKNITFIACGSTYSAAL--------SSNG----ELYTWGR 583

Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQL 551
           G  G+LGHG+++  ++P  V   +      VACG   S T+ +TA+G VFS G  +YG+L
Sbjct: 584 GNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKL 643

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
           G  G  G    +I   +    +  + CG    A +++  EVYTWGKG   +LGHG+ ++ 
Sbjct: 644 GRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHV 703

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQF 659
           + P +++ L+ K+VK +  G+       LH      D  I    RN +
Sbjct: 704 RYPKIIDILKTKKVKELCVGN-------LHVLALTEDQLIYGWGRNDY 744



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 127/247 (51%), Gaps = 17/247 (6%)

Query: 307 HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
           H + +T+   ++SWG G GG+LGHG  A    PKLI+AL   NI  +ACG  ++ A++ +
Sbjct: 516 HYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITFIACGSTYSAALSSN 575

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW--HTAAITSAGKL 424
           G+LYTWG G  N G LG  +  +  IP  V+  + G  +  + CG     T  +T++G +
Sbjct: 576 GELYTWGRG--NYGRLGHGNSDNVMIPTLVTA-LNGHMVVYVACGSGDSQTLCVTASGIV 632

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           F++GDG +G LG G    +  P+ V+ L ++      CG   +AA+              
Sbjct: 633 FSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYG---------- 682

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
             +++TWG G   +LGHG+ +    P  + +       ++  G+   +ALT    ++  G
Sbjct: 683 --EVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTEDQLIYGWG 740

Query: 545 SADYGQL 551
             DYGQ+
Sbjct: 741 RNDYGQI 747



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 161/355 (45%), Gaps = 25/355 (7%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   ++   L  + + C  +  ++++  G ++    GS          +  YP+ +   +
Sbjct: 452 PFYYDTIAELGIKQLCCTERALMILSVNGNVYMMYYGS----------ETQYPQRVYGFS 501

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
              I M+A      H  A+T    +Y+WG+G  + G LG      +  P+ +   +E   
Sbjct: 502 EKPIIMIASHSDGTHYLALTQDNSVYSWGNG--DGGRLGHGDRAWYDEPKLIEALVEK-N 558

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           I+ I CG  ++AA++S G+L+T+G G +G LGHG+  +  +P  V  L     V  +CG 
Sbjct: 559 ITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACG- 617

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
                    +G +      +S  +F+WGDG  G+LG G  +    P  V    DI+  KV
Sbjct: 618 ---------SGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKV 668

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIA 584
            CG   + ALTA G+V++ G  +  +LG          +I   +K + ++++  G+ H+ 
Sbjct: 669 YCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVL 728

Query: 585 VVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            ++    +Y WG+   GQ+          PTL   L  K V  + CG   + A C
Sbjct: 729 ALTEDQLIYGWGRNDYGQIDPALGTVVPEPTLCPTLSGKNVIGLACGPTQSFAWC 783



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 136/280 (48%), Gaps = 31/280 (11%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           ++S S G+ +        V+ WG G          +G  +   DR     PK++E+ V  
Sbjct: 508 IASHSDGTHYLALTQDNSVYSWGNG----------DGGRLGHGDRAWYDEPKLIEALVEK 557

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
           +   IACGS ++  ++  G++++WG G+ G+LGHG   +V  P L+ ALNG  +  VAC 
Sbjct: 558 NITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVACG 617

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T  VT SG +++WGDG  N G LG+        P K+  ++  + ++ + CG   
Sbjct: 618 SGDSQTLCVTASGIVFSWGDG--NYGKLGRGGCDGSKTP-KIVDKLLDINVAKVYCGGQF 674

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           +AA+T+ G+++T+G G    LGHG+      P+ ++ LK  K      G  H  A+ E  
Sbjct: 675 SAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHVLALTE-- 732

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQ----LGHGDAEPRVVP 510
                      + ++ WG    GQ    LG    EP + P
Sbjct: 733 ----------DQLIYGWGRNDYGQIDPALGTVVPEPTLCP 762



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 112/222 (50%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   +P   E+L  L+ V  + G     A+          
Sbjct: 3952 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVT--------- 4002

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  K++  G GA G+LG G  +  +VP  ++    +   KVA   G    +AL++ G
Sbjct: 4003 ---ADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 4059

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
             V+S G  D G+LG          ++   +    I DIACG +H A ++S   +YTWGKG
Sbjct: 4060 HVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKG 4119

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++ TP L+EAL+D +V  V CGS     +C+
Sbjct: 4120 RYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCV 4161



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 131/278 (47%), Gaps = 21/278 (7%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P  +   +  L+   +  G     A+T+ GK+
Sbjct: 3952 SGAIYGWG---HNHRGQLGGLEGAKVKLP-VLCESLSALRPVQLTGGEQTLFAVTADGKV 4007

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKEL--KTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S  VP  +E+++ +  K V  + G  H  A+            
Sbjct: 4008 YATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALS----------- 4056

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S   +++WG+G +G+LGHG+      P  ++         +ACG   + A+T+ G +++
Sbjct: 4057 -SEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYT 4115

Query: 543  MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGAN 600
             G   YG+LG   S  +   ++   ++   + D+ACGS       V+    V++WG G  
Sbjct: 4116 WGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDY 4175

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G ++  + P  +E+L    V  V CGS F+ A+
Sbjct: 4176 GKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVAL 4213


>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
            HERC2-like [Bombus terrestris]
          Length = 5151

 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/391 (32%), Positives = 197/391 (50%), Gaps = 25/391 (6%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            +DG G ++ WG     G LGG + G ++         LP + ES   L    +  G +  
Sbjct: 4288 WDGSGAIYGWGHN-HRGQLGG-LEGAKVK--------LPVLCESLSALRPVQLTGGEQTL 4337

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
            + VT  G++++ G G+ G+LG G    V  P L++++    +  VA   G  H  A++  
Sbjct: 4338 LAVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE 4397

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G +Y+WG+G  + G LG  + + +  P+ +  ++ G +I  I CG  H+AAITSAG L+T
Sbjct: 4398 GHVYSWGEG--DDGKLGHGNRLMYDRPKLIE-ELLGTEIVDIACGGHHSAAITSAGWLYT 4454

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+ VE L++ K +  +CG          +G           
Sbjct: 4455 WGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACG----------SGDAQTLCVTDDD 4504

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   +P+ ++    +   KV CG   ++ALT +G +++ G  
Sbjct: 4505 NVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKG 4564

Query: 547  DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            DY +LG          R    ++ + I  IA GS H    + K EV+TWG    GQLG G
Sbjct: 4565 DYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDG 4624

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K++  V CGS  T A
Sbjct: 4625 TTSALQRPRLVHALQGKKITRVACGSAHTLA 4655



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 206/389 (52%), Gaps = 27/389 (6%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            V++WG    + L  G + G +I         LP   E    L    IA GSK   +V+++
Sbjct: 3261 VYVWGLNDKDQL--GGLKGSKIK--------LPVYSEVLSKLKPIHIAGGSKTLFVVSQE 3310

Query: 315  GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTW 372
            G++++ GEG+ G+LG G +++V  PKLI  L+   I  +A   G  H  A+T  G +++W
Sbjct: 3311 GKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKIFSW 3370

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            G+G    G LG  + +S   PR +   ++  +I  I CG  H+AAITS+G+L+T+G G +
Sbjct: 3371 GEG--EDGKLGHGNSVSLDKPRLIES-LKSKRIRDIACGSGHSAAITSSGELYTWGLGEY 3427

Query: 433  GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            G LGHGD ++   P+ V++L   + +  +CG      +   A    GS       +++WG
Sbjct: 3428 GRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTA---DGS-------VYSWG 3477

Query: 493  DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            DG  G+LG G ++    PL +   + +   ++ CG   ++ALT  G+V++ G  DY +LG
Sbjct: 3478 DGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLG 3537

Query: 553  SPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
                   + PT +EG ++ + +  +A G+ H   V+   +VY WG   +GQ G+G     
Sbjct: 3538 HGNDHHVRKPTLVEG-LRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGSTIVN 3596

Query: 612  QTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            + P+LV  L D +V  V CGS+ + A  L
Sbjct: 3597 KKPSLVHELDDARVNRVSCGSSHSIAWVL 3625



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 166/336 (49%), Gaps = 33/336 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE--STVVLDAQSIACGSKHAVL 310
            G ++  GEG  NG LG           D  +   PK++   S  ++   ++  G KHA+ 
Sbjct: 3311 GKLYACGEG-TNGRLG---------LGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALA 3360

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
            +T+ G+IFSWGEG  GKLGHG    +  P+LI++L    I  +ACG  H+ A+T SG+LY
Sbjct: 3361 LTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELY 3420

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFG 428
            TWG G    G LG     +   P+ V   + G ++  + CG     T A+T+ G ++++G
Sbjct: 3421 TWGLG--EYGRLGHGDTATQMKPKLVQ-SLVGQRVIQVACGSRDAQTMALTADGSVYSWG 3477

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
            DG FG LG G       P  ++ L  L  V   CG   + A+ +              ++
Sbjct: 3478 DGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYG------------EV 3525

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            +TWG G   +LGHG+      P  V+         VA G    +A+T TGQV++ G  D+
Sbjct: 3526 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDH 3585

Query: 549  GQLGSPGST--GKFPTRIEGNIKHRYIEDIACGSYH 582
            GQ G+ GST   K P+ +   +    +  ++CGS H
Sbjct: 3586 GQQGN-GSTIVNKKPSLVH-ELDDARVNRVSCGSSH 3619



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 143/289 (49%), Gaps = 27/289 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G +F WGEG  +G LG   N V +          P+++ES      + IACGS H+  +T
Sbjct: 3365 GKIFSWGEG-EDGKLGHG-NSVSLDK--------PRLIESLKSKRIRDIACGSGHSAAIT 3414

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
              G++++WG G  G+LGHG  A    PKL+ +L G  +  VACG  +  T A+T  G +Y
Sbjct: 3415 SSGELYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVY 3474

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+      + P  +  ++ GL +  I CG   + A+T  G+++T+G G
Sbjct: 3475 SWGDG--DFGKLGRGGSDGCYTPLLID-RLNGLGVVQIECGAQFSLALTKYGEVWTWGKG 3531

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +  LGHG+      P  VE L+  K V  + G  H  A+ +              +++ 
Sbjct: 3532 DYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTG------------QVYA 3579

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
            WGD   GQ G+G       P  V   DD    +V+CG S +IA   T Q
Sbjct: 3580 WGDNDHGQQGNGSTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQ 3628



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 150/300 (50%), Gaps = 30/300 (10%)

Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
           P   DA+    I  + C E     +++SG++Y    G          SE  +  P++V G
Sbjct: 452 PFYCDAIAELGIKQLCCTERALMILSISGNVYMMYYG----------SETQY--PQRVYG 499

Query: 399 QMEG--LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK 456
             E     I+S   G  H  A+T    ++++G+G  G LGHGDR     P+ VE L +  
Sbjct: 500 FSEKPVTMIASHSDGT-HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKN 558

Query: 457 TVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
               +CG  ++A +         SNG    +L+TWG G  G+LGHG+++  ++P  V   
Sbjct: 559 ITFIACGSTYSAVL--------SSNG----ELYTWGRGNYGRLGHGNSDNVLIPTLVTAL 606

Query: 517 DDISFCKVACG--HSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIE 574
           +      VACG   S T+ +TA+G VFS G  +YG+LG  G  G    +I   +    + 
Sbjct: 607 NGHMVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVA 666

Query: 575 DIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNF 634
            + CG    A +++  EVYTWGKG   +LGHG+ E+ + P ++E L  K+VK  +C  NF
Sbjct: 667 KVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKE-LCVGNF 725



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 139/276 (50%), Gaps = 19/276 (6%)

Query: 307 HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
           H + +T+   ++SWG G GG+LGHG       PKL++AL   NI  +ACG  ++  ++ +
Sbjct: 516 HYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSN 575

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW--HTAAITSAGKL 424
           G+LYTWG G  N G LG  +  +  IP  V+  + G  +  + CG     T  +T++G +
Sbjct: 576 GELYTWGRG--NYGRLGHGNSDNVLIPTLVTA-LNGHMVVHVACGSGDSQTLCVTASGIV 632

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           F++GDG +G LG G    +  P+ V+ L ++      CG   +AA+              
Sbjct: 633 FSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYG---------- 682

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
             +++TWG G   +LGHG+ E    P  ++V       ++  G+   +ALT    V+  G
Sbjct: 683 --EVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTEDQLVYGWG 740

Query: 545 SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACG 579
             DYGQ+  + G+    PT +   +  + I  +ACG
Sbjct: 741 RNDYGQIDPALGTVVPEPT-LCPTLSGKNIIGLACG 775



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 164/356 (46%), Gaps = 27/356 (7%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   ++   L  + + C  +  ++++  G ++    GS          +  YP+ +   +
Sbjct: 452 PFYCDAIAELGIKQLCCTERALMILSISGNVYMMYYGS----------ETQYPQRVYGFS 501

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
              + M+A      H  A+T    +Y+WG+G  + G LG    + +  P+ V   ++   
Sbjct: 502 EKPVTMIASHSDGTHYLALTQDSSVYSWGNG--DGGRLGHGDRVWYDEPKLVEALVDK-N 558

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           I+ I CG  ++A ++S G+L+T+G G +G LGHG+  +  +P  V  L     V  +CG 
Sbjct: 559 ITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACG- 617

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
                    +G +      +S  +F+WGDG  G+LG G  +    P  V    DI+  KV
Sbjct: 618 ---------SGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKV 668

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHI 583
            CG   + ALTA G+V++ G  +  +LG       ++P  IE  +  + ++++  G++H+
Sbjct: 669 YCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIE-VLXTKKVKELCVGNFHV 727

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
             ++    VY WG+   GQ+          PTL   L  K +  + CG   + A C
Sbjct: 728 LALTEDQLVYGWGRNDYGQIDPALGTVVPEPTLCPTLSGKNIIGLACGLTQSFAWC 783



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 138/282 (48%), Gaps = 31/282 (10%)

Query: 235 SAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTV 294
           + ++S S G+ +        V+ WG G          +G  +   DR     PK++E+ V
Sbjct: 506 TMIASHSDGTHYLALTQDSSVYSWGNG----------DGGRLGHGDRVWYDEPKLVEALV 555

Query: 295 VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA 354
             +   IACGS ++ +++  G++++WG G+ G+LGHG   +V  P L+ ALNG  +  VA
Sbjct: 556 DKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVA 615

Query: 355 C--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
           C  G+  T  VT SG +++WGDG  N G LG+        P K+  ++  + ++ + CG 
Sbjct: 616 CGSGDSQTLCVTASGIVFSWGDG--NYGKLGRGGCDGSKTP-KIVDKLLDINVAKVYCGG 672

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
             +AA+T+ G+++T+G G    LGHG+      P+ +E L   K      G +H  A+ E
Sbjct: 673 QFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHVLALTE 732

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQ----LGHGDAEPRVVP 510
                        + ++ WG    GQ    LG    EP + P
Sbjct: 733 ------------DQLVYGWGRNDYGQIDPALGTVVPEPTLCP 762



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 112/222 (50%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   +P   E+L  L+ V  + G     A+          
Sbjct: 4291 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVT--------- 4341

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  K++  G GA G+LG G  +  +VP  ++    +   KVA   G    +AL++ G
Sbjct: 4342 ---ADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 4398

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
             V+S G  D G+LG          ++   +    I DIACG +H A ++S   +YTWGKG
Sbjct: 4399 HVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKG 4458

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++ TP LVEAL+D +V  V CGS     +C+
Sbjct: 4459 RYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCV 4500



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 131/278 (47%), Gaps = 21/278 (7%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P  +   +  L+   +  G     A+T+ GK+
Sbjct: 4291 SGAIYGWG---HNHRGQLGGLEGAKVKLP-VLCESLSALRPVQLTGGEQTLLAVTADGKV 4346

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKEL--KTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S  VP  +E+++ +  K V  + G  H  A+            
Sbjct: 4347 YATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALS----------- 4395

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S   +++WG+G +G+LGHG+      P  ++         +ACG   + A+T+ G +++
Sbjct: 4396 -SEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYT 4454

Query: 543  MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGAN 600
             G   YG+LG   S  +   ++   ++   + D+ACGS       V+    V++WG G  
Sbjct: 4455 WGKGRYGRLGHGDSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDY 4514

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G ++  + P  +E+L    V  V CGS F+ A+
Sbjct: 4515 GKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVAL 4552



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/109 (40%), Positives = 63/109 (57%)

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
           +ALT    V+S G+ D G+LG          ++   +  + I  IACGS + AV+SS  E
Sbjct: 518 LALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEALVDKNITFIACGSTYSAVLSSNGE 577

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           +YTWG+G  G+LGHG+++N   PTLV AL    V  V CGS  +  +C+
Sbjct: 578 LYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHVACGSGDSQTLCV 626


>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
          Length = 4643

 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 126/391 (32%), Positives = 197/391 (50%), Gaps = 25/391 (6%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            +DG G ++ WG     G LGG + G ++         LP + ES   L    +  G +  
Sbjct: 3780 WDGSGAIYGWGHN-HRGQLGG-LEGAKVK--------LPVLCESLSALRPVQLTGGEQTL 3829

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT  G++++ G G+ G+LG G    V  P L++++    +  VA   G  H  A++  
Sbjct: 3830 FAVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE 3889

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G +Y+WG+G  + G LG  + +S+  P+ +  ++ G +I  I CG  H+AAITSAG L+T
Sbjct: 3890 GHVYSWGEG--DDGKLGHGNRLSYDRPKLIE-ELLGTEIVDIACGGHHSAAITSAGWLYT 3946

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+ +E L++ K +  +CG          +G           
Sbjct: 3947 WGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACG----------SGDAQTLCVTDDD 3996

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   +P+ ++    +   KV CG   ++ALT +G +++ G  
Sbjct: 3997 NVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKG 4056

Query: 547  DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            DY +LG          R    ++ + I  IA GS H    + K EV+TWG    GQLG G
Sbjct: 4057 DYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDG 4116

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K++  V CGS  T A
Sbjct: 4117 TTSALQRPRLVHALQGKKITRVACGSAHTLA 4147



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/389 (33%), Positives = 207/389 (53%), Gaps = 27/389 (6%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            V++WG    + L  G + G +I         LP   E    L    IA GSK   +V+++
Sbjct: 2792 VYVWGLNDKDQL--GGLKGSKIK--------LPVYSEVLSKLKPVHIAGGSKTLFVVSQE 2841

Query: 315  GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTW 372
            G++++ GEG+ G+LG G +++V  PK I  L+   I  VA   G  H  A+T  G +++W
Sbjct: 2842 GKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSW 2901

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            G+G    G LG  + IS   PR +   ++  +I  I CG  H+AAITS+G+L+T+G G +
Sbjct: 2902 GEG--EDGKLGHGNSISLDKPRLIES-LKSKRIRDIACGSGHSAAITSSGELYTWGLGEY 2958

Query: 433  GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            G LGHGD ++ S P+ V++L   + +  +CG      +   A      +GL    +++WG
Sbjct: 2959 GRLGHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTA------DGL----VYSWG 3008

Query: 493  DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            DG  G+LG G ++    PL +   + +   ++ CG   ++ALT  G+V++ G  DY +LG
Sbjct: 3009 DGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLG 3068

Query: 553  SPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
                   + PT +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G     
Sbjct: 3069 HGNDHHVRKPTLVEG-LRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDHGQQGNGTTIVN 3127

Query: 612  QTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            + P+LV  L D +V  V CGS+ + A  L
Sbjct: 3128 KKPSLVHELDDARVNRVSCGSSHSIAWVL 3156



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/336 (32%), Positives = 164/336 (48%), Gaps = 33/336 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE--STVVLDAQSIACGSKHAVL 310
            G ++  GEG  NG LG           D  +   PK +   S  V+   ++  G KHA+ 
Sbjct: 2842 GKLYACGEG-TNGRLG---------LGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALA 2891

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
            +T+ G++FSWGEG  GKLGHG    +  P+LI++L    I  +ACG  H+ A+T SG+LY
Sbjct: 2892 LTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELY 2951

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFG 428
            TWG G    G LG     +   P+ V   + G ++  I CG     T A+T+ G ++++G
Sbjct: 2952 TWGLG--EYGRLGHGDTATQSKPKLVQS-LVGQRVIQIACGSRDAQTMALTADGLVYSWG 3008

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
            DG FG LG G       P  ++ L  L  V   CG   + A+ +              ++
Sbjct: 3009 DGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYG------------EV 3056

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            +TWG G   +LGHG+      P  V+         VA G    +A+T  GQV++ G  D+
Sbjct: 3057 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDH 3116

Query: 549  GQLGSPGST--GKFPTRIEGNIKHRYIEDIACGSYH 582
            GQ G+ G+T   K P+ +   +    +  ++CGS H
Sbjct: 3117 GQQGN-GTTIVNKKPSLVH-ELDDARVNRVSCGSSH 3150



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/289 (33%), Positives = 148/289 (51%), Gaps = 27/289 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WGEG  +G LG   +G  IS  D+     P+++ES      + IACGS H+  +T
Sbjct: 2896 GKVFSWGEG-EDGKLG---HGNSIS-LDK-----PRLIESLKSKRIRDIACGSGHSAAIT 2945

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
              G++++WG G  G+LGHG  A  S PKL+ +L G  +  +ACG  +  T A+T  G +Y
Sbjct: 2946 SSGELYTWGLGEYGRLGHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVY 3005

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+      + P  +  ++ GL +  I CG   + A+T  G+++T+G G
Sbjct: 3006 SWGDG--DFGKLGRGGSDGCYTPLLID-RLNGLGVVQIECGAQFSLALTKYGEVWTWGKG 3062

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +  LGHG+      P  VE L+  K +  + G  H  A+ ++             +++ 
Sbjct: 3063 DYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDIG------------QVYA 3110

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
            WGD   GQ G+G       P  V   DD    +V+CG S +IA   T Q
Sbjct: 3111 WGDNDHGQQGNGTTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQ 3159



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 125/250 (50%), Gaps = 21/250 (8%)

Query: 307 HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
           H + +T+   ++SWG G  G+LGHG       PKLI+AL   NI  +ACG  ++ A++ +
Sbjct: 513 HYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKNITFIACGSTYSAALSSN 572

Query: 367 GDLYTWGDGIHNLGLLGQ-VSEISHWIPRKVSGQMEGLQISSICCG----PWHTAAITSA 421
           G+LYTWG G  N G LG   S+    IP  V+  + G  +  + CG    P  T  +T++
Sbjct: 573 GELYTWGRG--NYGKLGHGNSDKDVMIPTLVTA-LNGHMVVYVACGGGRDP-QTLCVTAS 628

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G +F++GDG  G LG G    +  P+ V+ L ++      CG   +AA+           
Sbjct: 629 GIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALTAYG------- 681

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
                +++TWG G + +LGHG+ +    P  + +        +  GH   +ALT    V+
Sbjct: 682 -----EVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVY 736

Query: 542 SMGSADYGQL 551
             G  D+GQ+
Sbjct: 737 GWGRNDHGQI 746



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 122/229 (53%), Gaps = 16/229 (6%)

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           H  A+T    ++++G+G  G LGHG+ +    P+ +E L E      +CG  ++AA+   
Sbjct: 513 HYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKNITFIACGSTYSAAL--- 569

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACG---HS 529
                 SNG    +L+TWG G  G+LGHG+++  V +P  V   +      VACG     
Sbjct: 570 -----SSNG----ELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDP 620

Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
            T+ +TA+G VFS G  ++G+LG  G  G    +I   +    +  + CG    A +++ 
Sbjct: 621 QTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGQQFSAALTAY 680

Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            EVYTWGKG + +LGHG+ ++ + P +++ L+ K++K +  G     A+
Sbjct: 681 GEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLAL 729



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 156/356 (43%), Gaps = 28/356 (7%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   ++   L  + + C  +  ++++  G ++    GS  +  +G              +
Sbjct: 452 PVYYDTISELGIKQLCCTERAVIILSVNGNVYMMYYGSETQRVYG-------------FS 498

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
              I M+A      H  A+T    +Y+WG+G    G LG  +   +  P+ +   +E   
Sbjct: 499 EKPITMIASHSDGTHYLALTQDNSVYSWGNG--ECGRLGHGNMTWYDEPKLIEALVEK-N 555

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS-STSVPREVETLKELKTVMASCG 463
           I+ I CG  ++AA++S G+L+T+G G +G LGHG+      +P  V  L     V  +CG
Sbjct: 556 ITFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACG 615

Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
                  + V          +S  +F+WGDG  G+LG G  +    P  V    DI+  K
Sbjct: 616 GGRDPQTLCVT---------ASGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINVAK 666

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHI 583
           V CG   + ALTA G+V++ G  +  +LG          +I   +K + I+D+  G  H+
Sbjct: 667 VYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHV 726

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
             ++    VY WG+  +GQ+          PTL      K V  + CG   + A C
Sbjct: 727 LALTEDQLVYGWGRNDHGQIDPALGTIVPEPTLCPTFSGKNVIGLACGPTQSFAWC 782



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 140/288 (48%), Gaps = 41/288 (14%)

Query: 235 SAVSSSSQGSCHEDFDGLGDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVL 290
           + ++S S G+ +        V+ WG G    LG+G          ++  D      PK++
Sbjct: 503 TMIASHSDGTHYLALTQDNSVYSWGNGECGRLGHG---------NMTWYDE-----PKLI 548

Query: 291 ESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSN 349
           E+ V  +   IACGS ++  ++  G++++WG G+ GKLGHG  + DV  P L+ ALNG  
Sbjct: 549 EALVEKNITFIACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHM 608

Query: 350 IHMVACG---EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
           +  VACG   +  T  VT SG +++WGDG H  G LG+        P K+  ++  + ++
Sbjct: 609 VVYVACGGGRDPQTLCVTASGIVFSWGDGNH--GKLGRGGCDGSKTP-KIVDKLLDINVA 665

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            + CG   +AA+T+ G+++T+G G    LGHG+      P+ ++ LK  K      G  H
Sbjct: 666 KVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLH 725

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ----LGHGDAEPRVVP 510
             A+ E             + ++ WG    GQ    LG    EP + P
Sbjct: 726 VLALTE------------DQLVYGWGRNDHGQIDPALGTIVPEPTLCP 761



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 112/222 (50%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   +P   E+L  L+ V  + G     A+          
Sbjct: 3783 SGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVT--------- 3833

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  K++  G GA G+LG G  +  +VP  ++    +   KVA   G    +AL++ G
Sbjct: 3834 ---ADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 3890

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
             V+S G  D G+LG          ++   +    I DIACG +H A ++S   +YTWGKG
Sbjct: 3891 HVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKG 3950

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++ TP L+EAL+D +V  V CGS     +C+
Sbjct: 3951 RYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCV 3992



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 131/278 (47%), Gaps = 21/278 (7%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P  +   +  L+   +  G     A+T+ GK+
Sbjct: 3783 SGAIYGWG---HNHRGQLGGLEGAKVKLP-VLCESLSALRPVQLTGGEQTLFAVTADGKV 3838

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKEL--KTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S  VP  +E+++ +  K V  + G  H  A+            
Sbjct: 3839 YATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALS----------- 3887

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S   +++WG+G +G+LGHG+      P  ++         +ACG   + A+T+ G +++
Sbjct: 3888 -SEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYT 3946

Query: 543  MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGAN 600
             G   YG+LG   S  +   ++   ++   + D+ACGS       V+    V++WG G  
Sbjct: 3947 WGKGRYGRLGHGDSEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDY 4006

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G ++  + P  +E+L    V  V CGS F+ A+
Sbjct: 4007 GKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVAL 4044



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 24/180 (13%)

Query: 253 GDVFIWGEGLGNGLLG-GAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           G VF WG+G  +G LG G  +G +           PK+++  + ++   + CG + +  +
Sbjct: 629 GIVFSWGDG-NHGKLGRGGCDGSKT----------PKIVDKLLDINVAKVYCGQQFSAAL 677

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           T  G++++WG+G   KLGHG E  V YPK+ID L    I  +  G  H  A+T    +Y 
Sbjct: 678 TAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDLYIGHLHVLALTEDQLVYG 737

Query: 372 WGDGIHNLGLLGQVSE-ISHWIPR-KVSGQMEGLQISSICCGP-----WHTAAITSAGKL 424
           WG   H     GQ+   +   +P   +     G  +  + CGP     W TAA + A ++
Sbjct: 738 WGRNDH-----GQIDPALGTIVPEPTLCPTFSGKNVIGLACGPTQSFAWCTAAWSVANRV 792


>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
 gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
          Length = 443

 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 116/348 (33%), Positives = 192/348 (55%), Gaps = 18/348 (5%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK-QGQIFSWGEGSGGKLGHGVE 333
           ++   D  D L+P VL         S+ CG+ H    ++ + Q++SWG G  G+LGHG  
Sbjct: 45  QLGHGDAEDRLVPTVLSGFDAPGITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNS 104

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +DV  P+ + AL G  I  +ACG+ H  AVT++G + +WG   +  G LG  +     +P
Sbjct: 105 SDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGQVQSWGR--NQNGQLGLGTTEDSLLP 162

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           +K+    EG+ +  I  G  HTAA+T  G L+ +G G +G LG GDR+   +P +V +++
Sbjct: 163 QKIQA-FEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVE 221

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
             K V+ +CG  HT  + +            S  L+T+G    GQLGHGD E  +VP  +
Sbjct: 222 GEKMVLVACGWRHTITVSD------------SGNLYTYGWSKYGQLGHGDFEDHLVPHKL 269

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNI-KHRY 572
           +   D +  +++ G   T+ALT+ G+++  G   +GQ+G  G+     + ++ +  + + 
Sbjct: 270 EALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGV-GNNDDHCSPVQVHFPEDQK 328

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           I  +ACG  H   +S K  V++WG+G +GQLG+G+  ++ TP L++AL
Sbjct: 329 ISQVACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDAL 376



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 178/367 (48%), Gaps = 30/367 (8%)

Query: 284 ALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLID 343
           A +P     TVVL    ++ G+ H+V +     + SWG G  G+LGHG   D   P ++ 
Sbjct: 6   AAVPDSPPQTVVL----VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLS 61

Query: 344 ALNGSNIHMVACGEFHTCAVTLSG-DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
             +   I  V CG  HT A +     +Y+WG G  + G LG  +    + P+ V   ++G
Sbjct: 62  GFDAPGITSVICGADHTTAYSEDELQVYSWGWG--DFGRLGHGNSSDVFTPQPVKA-LQG 118

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
           L+I  I CG  H  A+T AG++ ++G    G LG G    + +P++++  + +   M + 
Sbjct: 119 LKIKQIACGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGVCVKMIAA 178

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
           G  HTAA+ E               L+ WG G  G LG GD   R++P  V   +     
Sbjct: 179 GAEHTAAVTE------------DGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMV 226

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-----PTRIEGNIKHRYIEDIA 577
            VACG   TI ++ +G +++ G + YGQLG     G F     P ++E  +K   I  I+
Sbjct: 227 LVACGWRHTITVSDSGNLYTYGWSKYGQLGH----GDFEDHLVPHKLEA-LKDSTISQIS 281

Query: 578 CGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            G  H   ++S+ ++Y WG    GQ+G G+N++  +P  V    D+++  V CG   T A
Sbjct: 282 GGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQKISQVACGWRHTLA 341

Query: 638 ICLHKGV 644
           +   K V
Sbjct: 342 LSEKKNV 348



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 33/46 (71%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           +ACG +H + ++++  +FSWG G+ G+LG+G   D + P LIDAL+
Sbjct: 332 VACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALS 377


>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 441

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/351 (34%), Positives = 194/351 (55%), Gaps = 24/351 (6%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQ---SIACGSKHAVLVTK-QGQIFSWGEGSGGKLGH 330
           ++   D  D  LP  L +   LDAQ   SIACG+ H +  ++ + +++SWG G  G+LGH
Sbjct: 45  QLGHGDTDDRPLPTQLSA---LDAQHIDSIACGADHTLAYSESRNELYSWGWGDFGRLGH 101

Query: 331 GVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH 390
           G  +D+  P+ I AL G  I  +ACG+ H  AVT+ G++ +WG   +  G LG  +    
Sbjct: 102 GNSSDLLIPQPIIALQGLRIKQIACGDSHCLAVTMEGEVQSWGR--NQNGQLGLGNTEDS 159

Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
            +P+K+    +G+ I  +  G  H+ AIT  G+L+ +G G +G LG GDR+    P +V 
Sbjct: 160 LVPQKIQA-FKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWNPEKVS 218

Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
           ++   K VM +CG  HT ++             SS  ++T+G    GQLGHG+ E  +VP
Sbjct: 219 SVDCDKMVMVACGWRHTISVS------------SSGGIYTYGWSKYGQLGHGNFEDSLVP 266

Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIK 569
             ++   D    +V+ G   ++ALT+TG +F  G   +GQ+G   +     P +++    
Sbjct: 267 QKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCSPVQVKFPQD 326

Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
            R ++ I+CG  H   V+ K  V++WG+G NGQLGHGD  ++ +P ++EAL
Sbjct: 327 QRVVQ-ISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDRNSPKIIEAL 376



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 40/62 (64%)

Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           I+ G+ H   + S + V +WG+G +GQLGHGD +++  PT + AL  + + S+ CG++ T
Sbjct: 19  ISAGASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPLPTQLSALDAQHIDSIACGADHT 78

Query: 636 AA 637
            A
Sbjct: 79  LA 80


>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 187/358 (52%), Gaps = 38/358 (10%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK-QGQIFSWGEGSGGKLGHGVE 333
           ++   D  D  +P VL S  V    S+ CG+ H +  +  + Q++SWG G  G+LGHG  
Sbjct: 52  QLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNS 111

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +DV  P+ I AL G  I  +ACG+ H   VT +G +++WG   +  G LG  +     +P
Sbjct: 112 SDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGR--NQNGQLGLGNNQDSLLP 169

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           +K+    EG+ +  I  G  HT AIT  G L+ +G G +G LG  DR   SVP +V +++
Sbjct: 170 QKIKA-FEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVE 228

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
             K V+ +CG  H+ ++             SS  L+T+G    GQLGHGD +  +VP  +
Sbjct: 229 GEKMVLVACGWRHSVSVS------------SSGALYTYGWSKYGQLGHGDFQDHLVPRKL 276

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH--- 570
           +   D+   +++ G   T+A+   G+++  G   +GQ+G           +E N+ H   
Sbjct: 277 EALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVG-----------VEDNVDHCSP 325

Query: 571 --------RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
                   + I  +ACG  H   ++    +++WG+GA+GQLGHG+  ++ TP +++AL
Sbjct: 326 VEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMIDAL 383



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 135/274 (49%), Gaps = 28/274 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V  WG    NG LG   N         +D+LLP+ +++   +  + IA G++H   +T
Sbjct: 145 GQVHSWGRNQ-NGQLGLGNN---------QDSLLPQKIKAFEGVCVKMIAAGAEHTTAIT 194

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           + G ++ WG G  G LG     D S P+ + ++ G  + +VACG  H+ +V+ SG LYT+
Sbjct: 195 EGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTY 254

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
             G    G LG      H +PRK+   ++ + IS I  G  HT A+   GKL+ +G   F
Sbjct: 255 --GWSKYGQLGHGDFQDHLVPRKLEA-LKDVPISQISGGWRHTMAVAEDGKLYGWGWNKF 311

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           G +G  D      P EV    E K V  +CG  HT A+ E            +K +F+WG
Sbjct: 312 GQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTE------------NKNIFSWG 359

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
            GA GQLGHG+   R  P   K+ D +S    AC
Sbjct: 360 RGASGQLGHGEIIDRNTP---KMIDALSLDGSAC 390



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 155/340 (45%), Gaps = 27/340 (7%)

Query: 352 MVACGEFHTCAVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC 410
           +++ G  H+ A+ LSG +  +WG G    G LG        +P  ++   +  +++S+ C
Sbjct: 25  LISAGANHSAAL-LSGQMVCSWGRG--EDGQLGHGDSEDRPVPTVLT-SFDVPRVTSVIC 80

Query: 411 GPWHTAAITS-AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA 469
           G  HT A +    +L+++G G FG LGHG+ S    P+ +  L+ +K    +CG  H   
Sbjct: 81  GADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLT 140

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHS 529
           +          NG    ++ +WG    GQLG G+ +  ++P  +K  + +    +A G  
Sbjct: 141 VT--------FNG----QVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAE 188

Query: 530 ITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
            T A+T  G ++  G   YG LG S       P ++  +++   +  +ACG  H   VSS
Sbjct: 189 HTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVS-SVEGEKMVLVACGWRHSVSVSS 247

Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIAD 648
              +YT+G    GQLGHGD ++   P  +EAL+D  +  +  G   T A+         D
Sbjct: 248 SGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVA-------ED 300

Query: 649 HSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTA 688
             +     N+F       N  +C  V       +K ++ A
Sbjct: 301 GKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVA 340



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 96/191 (50%), Gaps = 13/191 (6%)

Query: 449 VETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV 508
           V    E   ++ S G  H+AA+            LS + + +WG G +GQLGHGD+E R 
Sbjct: 15  VPEAPEQSVILISAGANHSAAL------------LSGQMVCSWGRGEDGQLGHGDSEDRP 62

Query: 509 VPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYGQLGSPGSTGKFPTRIEGN 567
           VP  +   D      V CG   TIA +    Q++S G  D+G+LG   S+  F  +    
Sbjct: 63  VPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVA 122

Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKS 627
           ++   I+ IACG  H   V+   +V++WG+  NGQLG G+N++   P  ++A     VK 
Sbjct: 123 LQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKM 182

Query: 628 VVCGSNFTAAI 638
           +  G+  T AI
Sbjct: 183 IAAGAEHTTAI 193


>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 187/358 (52%), Gaps = 38/358 (10%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK-QGQIFSWGEGSGGKLGHGVE 333
           ++   D  D  +P VL S  V    S+ CG+ H +  +  + Q++SWG G  G+LGHG  
Sbjct: 52  QLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNS 111

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +DV  P+ I AL G  I  +ACG+ H   VT +G +++WG   +  G LG  +     +P
Sbjct: 112 SDVFNPQPIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGR--NQNGQLGLGNNQDSLLP 169

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           +K+    EG+ +  I  G  HT AIT  G L+ +G G +G LG  DR   SVP +V +++
Sbjct: 170 QKIKA-FEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVE 228

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
             K V+ +CG  H+ ++             SS  L+T+G    GQLGHGD +  +VP  +
Sbjct: 229 GEKMVLVACGWRHSVSVS------------SSGALYTYGWSKYGQLGHGDFQDHLVPRKL 276

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH--- 570
           +   D+   +++ G   T+A+   G+++  G   +GQ+G           +E N+ H   
Sbjct: 277 EALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVG-----------VEDNVDHCSP 325

Query: 571 --------RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
                   + I  +ACG  H   ++    +++WG+GA+GQLGHG+  ++ TP +++AL
Sbjct: 326 VEVNFPDEQKIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMIDAL 383



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 135/274 (49%), Gaps = 28/274 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V  WG    NG LG   N         +D+LLP+ +++   +  + IA G++H   +T
Sbjct: 145 GQVHSWGRNQ-NGQLGLGNN---------QDSLLPQKIKAFEGVCVKMIAAGAEHTTAIT 194

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           + G ++ WG G  G LG     D S P+ + ++ G  + +VACG  H+ +V+ SG LYT+
Sbjct: 195 EGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTY 254

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
             G    G LG      H +PRK+   ++ + IS I  G  HT A+   GKL+ +G   F
Sbjct: 255 --GWSKYGQLGHGDFQDHLVPRKLEA-LKDVPISQISGGWRHTMAVAEDGKLYGWGWNKF 311

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           G +G  D      P EV    E K V  +CG  HT A+ E            +K +F+WG
Sbjct: 312 GQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHTLALTE------------NKNIFSWG 359

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
            GA GQLGHG+   R  P   K+ D +S    AC
Sbjct: 360 RGASGQLGHGEIIDRNTP---KMIDALSLDGSAC 390



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 155/340 (45%), Gaps = 27/340 (7%)

Query: 352 MVACGEFHTCAVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC 410
           +++ G  H+ A+ LSG +  +WG G    G LG        +P  ++   +  +++S+ C
Sbjct: 25  LISAGANHSAAL-LSGQMVCSWGRG--EDGQLGHGDSEDRPVPTVLT-SFDVPRVTSVIC 80

Query: 411 GPWHTAAITS-AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA 469
           G  HT A +    +L+++G G FG LGHG+ S    P+ +  L+ +K    +CG  H   
Sbjct: 81  GADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLT 140

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHS 529
           +          NG    ++ +WG    GQLG G+ +  ++P  +K  + +    +A G  
Sbjct: 141 VT--------FNG----QVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAGAE 188

Query: 530 ITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
            T A+T  G ++  G   YG LG S       P ++  +++   +  +ACG  H   VSS
Sbjct: 189 HTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVS-SVEGEKMVLVACGWRHSVSVSS 247

Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIAD 648
              +YT+G    GQLGHGD ++   P  +EAL+D  +  +  G   T A+         D
Sbjct: 248 SGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVA-------ED 300

Query: 649 HSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTA 688
             +     N+F       N  +C  V       +K ++ A
Sbjct: 301 GKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVA 340



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/191 (33%), Positives = 96/191 (50%), Gaps = 13/191 (6%)

Query: 449 VETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV 508
           V    E   ++ S G  H+AA+            LS + + +WG G +GQLGHGD+E R 
Sbjct: 15  VPEAPEQSVILISAGANHSAAL------------LSGQMVCSWGRGEDGQLGHGDSEDRP 62

Query: 509 VPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYGQLGSPGSTGKFPTRIEGN 567
           VP  +   D      V CG   TIA +    Q++S G  D+G+LG   S+  F  +    
Sbjct: 63  VPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVA 122

Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKS 627
           ++   I+ IACG  H   V+   +V++WG+  NGQLG G+N++   P  ++A     VK 
Sbjct: 123 LQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKM 182

Query: 628 VVCGSNFTAAI 638
           +  G+  T AI
Sbjct: 183 IAAGAEHTTAI 193


>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
            vitripennis]
          Length = 4752

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/415 (32%), Positives = 203/415 (48%), Gaps = 29/415 (6%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            +DG G ++ WG     G LGG + G ++         LP   ES   L    +A G +  
Sbjct: 3890 WDGSGAIYGWGHN-HRGQLGG-LEGAKVK--------LPLPCESLSALRPIQLAGGEQTL 3939

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT  G++++ G G+ G+LG G    V  P L++++    I  VA   G  H  A++  
Sbjct: 3940 FAVTADGKVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSE 3999

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G +Y+WG+G  + G LG  + I++  P+ +   + G +I  I CG  H+AAI+SAG L+T
Sbjct: 4000 GHVYSWGEG--DDGKLGHGNRITYDRPKLIEALL-GTEIVDIACGGHHSAAISSAGWLYT 4056

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P  V  L+  K +  +CG          +G           
Sbjct: 4057 WGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACG----------SGDAQTLCVTDDD 4106

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   VP+ ++    +   KV CG   ++ALT +G V++ G  
Sbjct: 4107 NVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKG 4166

Query: 547  DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            DY +LG          R    ++ + I  IA GS H    S K EVYTWG    GQLG G
Sbjct: 4167 DYHRLGHGTDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGDNDEGQLGDG 4226

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
                +Q+P LV AL+ K +  V CGS  T A    K    A HS+ +    +++ 
Sbjct: 4227 TTHAQQSPRLVHALQGKNITRVACGSAHTLAWSTTK----ATHSLPAATPMEYDL 4277



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 129/391 (32%), Positives = 202/391 (51%), Gaps = 31/391 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            V++WG    + L  G + G +I         LP   E    L    IA GSK   +V+++
Sbjct: 2924 VYVWGLNDKDQL--GGLKGSKIK--------LPVHSEVLSKLKPIHIAGGSKTLFVVSQE 2973

Query: 315  GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTW 372
            G++++ GEG+ G+LG G   +V  PK I  L+   I  VA   G  H  A+T  G +++W
Sbjct: 2974 GKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVFSW 3033

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            G+G    G LG  + +S   PR +   ++  +I  I CG  H+AAI S G+L+T+G G +
Sbjct: 3034 GEG--EDGKLGHGNRVSLDKPRLIEA-LKSKRIRDIACGSGHSAAIASNGELYTWGLGEY 3090

Query: 433  GALGHGDRSSTSVPREVETLKELKTVMASCGV--WHTAAIVEVAGKTSGSNGLSSKKLFT 490
            G LGHGD ++   P+ V+ L   + +  +CG     T A+ E      GS       +++
Sbjct: 3091 GRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTE-----DGS-------VYS 3138

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G ++    PL V   + +   +V CG   ++ALT  G+V++ G  DY +
Sbjct: 3139 WGDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFR 3198

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + PT +EG ++ + +  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3199 LGHGNDHHVRRPTLVEG-LRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGSTM 3257

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              + P+LV  L D +V  V CGS+ + A  L
Sbjct: 3258 VNRKPSLVHNLEDAKVNRVACGSSHSIAWVL 3288



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 163/339 (48%), Gaps = 33/339 (9%)

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
            V +   ++ WG     +LG    + +  P   + L+      +A G      V+  G LY
Sbjct: 2918 VQQNAAVYVWGLNDKDQLGGLKGSKIKLPVHSEVLSKLKPIHIAGGSKTLFVVSQEGKLY 2977

Query: 371  TWGDGIH---------NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
              G+G +         N+G    +  +S +I +KV+          +  G  H  A+T  
Sbjct: 2978 ACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVA----------VHSGGKHALALTQD 3027

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            GK+F++G+G  G LGHG+R S   PR +E LK  +    +CG  H+AAI         SN
Sbjct: 3028 GKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAI--------ASN 3079

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
            G    +L+TWG G  G+LGHGD    + P  V         +VACG   + T+ALT  G 
Sbjct: 3080 G----ELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGS 3135

Query: 540  VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
            V+S G  D+G+LG  GS G +       +    +  + CG+     ++   EV+TWGKG 
Sbjct: 3136 VYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGD 3195

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
              +LGHG++ + + PTLVE LR K+V  V  G+    A+
Sbjct: 3196 YFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLAV 3234



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 164/329 (49%), Gaps = 42/329 (12%)

Query: 316 QIFSWGE---GSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           ++ +WG    GSG           S P   DA+    +  + C E     ++LSG +Y  
Sbjct: 434 EVLAWGNVHFGSG-----------SMPFYCDAIAEIGVKQLCCTERALLILSLSGKVYMM 482

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDGT 431
             G          SE  +  P+ V G  + + QI+S   G  H  A+T+ G ++++G+G 
Sbjct: 483 YYG----------SETQY--PQSVYGFADDVVQIASHPDGK-HYLALTTKGIVYSWGNGD 529

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGHGD  S   P+ +E L +      +CG  ++AAI             S+ +L TW
Sbjct: 530 GGRLGHGDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAIS------------STGELLTW 577

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYG 549
           G G+ G+LGHG  +   +P  V   +  +   VACG   S T+ +T +G VFS G  DYG
Sbjct: 578 GRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDYG 637

Query: 550 QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           +LG  GS G    +I   +  + +  + CG    A +++  EVYTWGKG + +LGHG+ E
Sbjct: 638 KLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYRLGHGNEE 697

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P LVE LR+K+V+ +  G+    AI
Sbjct: 698 HVRFPKLVEGLRNKKVRDLSVGNLHILAI 726



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 142/289 (49%), Gaps = 27/289 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WGEG  +G LG   N V +          P+++E+      + IACGS H+  + 
Sbjct: 3028 GKVFSWGEG-EDGKLGHG-NRVSLDK--------PRLIEALKSKRIRDIACGSGHSAAIA 3077

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
              G++++WG G  G+LGHG       PKL+DAL G  +  VACG  +  T A+T  G +Y
Sbjct: 3078 SNGELYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVY 3137

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+      + P  V  ++ GL +  + CG   + A+T  G+++T+G G
Sbjct: 3138 SWGDG--DFGKLGRGGSDGCYSPLPVD-RLNGLGVVQVECGAQFSLALTKYGEVWTWGKG 3194

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +  LGHG+      P  VE L+  K V  + G  H  A+ +              +++ 
Sbjct: 3195 DYFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTDAG------------QVYA 3242

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
            WGD   GQ G+G       P  V   +D    +VACG S +IA   T Q
Sbjct: 3243 WGDNDHGQQGNGSTMVNRKPSLVHNLEDAKVNRVACGSSHSIAWVLTDQ 3291



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 172/361 (47%), Gaps = 31/361 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + TA  K Y        +L  + +GG+D      +  +S +      V+ +S G    
Sbjct: 3939 LFAVTADGKVYATGYG---ALGRLGTGGVDSVMV-PTLLESIQHVFIKKVAVNSGGKHCL 3994

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
                 G V+ WGEG  +G LG   +G  I+  DR     PK++E+ +  +   IACG  H
Sbjct: 3995 ALSSEGHVYSWGEG-DDGKLG---HGNRITY-DR-----PKLIEALLGTEIVDIACGGHH 4044

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  ++  G +++WG+G  G+LGHG   D   P ++ AL G  +  VACG  +  T  VT 
Sbjct: 4045 SAAISSAGWLYTWGKGRYGRLGHGDSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTD 4104

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
              ++++WGDG  + G LG+       +P K+   + GL +  + CG   + A+T +G ++
Sbjct: 4105 DDNVWSWGDG--DYGKLGRGGSDGCKVPMKIE-SLAGLGVVKVECGSQFSVALTRSGAVY 4161

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       PR+V  L+  K V  + G  H  A  +             
Sbjct: 4162 TWGKGDYHRLGHGTDDHVRRPRKVSALQGKKIVSIATGSLHCVACSD------------K 4209

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
             +++TWGD  EGQLG G    +  P  V      +  +VACG + T+A + T    S+ +
Sbjct: 4210 GEVYTWGDNDEGQLGDGTTHAQQSPRLVHALQGKNITRVACGSAHTLAWSTTKATHSLPA 4269

Query: 546  A 546
            A
Sbjct: 4270 A 4270



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 164/348 (47%), Gaps = 26/348 (7%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
           +P   ++   +  + + C  +  ++++  G+++    GS          +  YP+ +   
Sbjct: 448 MPFYCDAIAEIGVKQLCCTERALLILSLSGKVYMMYYGS----------ETQYPQSVYGF 497

Query: 346 NGSNIHMVACGE-FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
               + + +  +  H  A+T  G +Y+WG+G  + G LG     S   P+ +   +    
Sbjct: 498 ADDVVQIASHPDGKHYLALTTKGIVYSWGNG--DGGRLGHGDSFSCDEPQVIE-VLSDRT 554

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           ++ I CG  ++AAI+S G+L T+G G++G LGHG     S+P  V  L        +CG 
Sbjct: 555 VTYIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACG- 613

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
                    +G +      +S  +F+WGDG  G+LG G ++   +P  V    D +  KV
Sbjct: 614 ---------SGDSQTLCVTNSGIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKV 664

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHI 583
            CG   + ALTA G+V++ G  D+ +LG       +FP  +EG ++++ + D++ G+ HI
Sbjct: 665 FCGGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHVRFPKLVEG-LRNKKVRDLSVGNLHI 723

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
             ++    VY WG+    Q+          PTL   L  K V  +VCG
Sbjct: 724 LAITEDQLVYGWGRNDACQIDPSLGAVVSEPTLCPTLSGKSVIGLVCG 771



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 136/280 (48%), Gaps = 31/280 (11%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           ++S   G  +      G V+ WG G G G LG   +G   S  +      P+V+E     
Sbjct: 504 IASHPDGKHYLALTTKGIVYSWGNGDG-GRLG---HGDSFSCDE------PQVIEVLSDR 553

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  ++  G++ +WG GS G+LGHG+  D+S P ++ ALNG  +  VAC 
Sbjct: 554 TVTYIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACG 613

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T  VT SG +++WGDG  + G LG+       +P+ V   ++   +  + CG   
Sbjct: 614 SGDSQTLCVTNSGIVFSWGDG--DYGKLGRGGSDGSKLPKIVDKLLDQ-NVVKVFCGGQF 670

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           +AA+T+ G+++T+G G    LGHG+      P+ VE L+  K    S G  H  AI E  
Sbjct: 671 SAALTAHGEVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITE-- 728

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQ----LGHGDAEPRVVP 510
                      + ++ WG     Q    LG   +EP + P
Sbjct: 729 ----------DQLVYGWGRNDACQIDPSLGAVVSEPTLCP 758



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 106/227 (46%), Gaps = 18/227 (7%)

Query: 424  LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
            ++ +G      LG    S   +P   E L +LK +  + G   T  +V   GK       
Sbjct: 2924 VYVWGLNDKDQLGGLKGSKIKLPVHSEVLSKLKPIHIAGGS-KTLFVVSQEGK------- 2975

Query: 484  SSKKLFTWGDGAEGQLGHGD----AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                L+  G+G  G+LG GD     EP+ +P   +    I    V  G    +ALT  G+
Sbjct: 2976 ----LYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYI--IKKVAVHSGGKHALALTQDGK 3029

Query: 540  VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
            VFS G  + G+LG          R+   +K + I DIACGS H A ++S  E+YTWG G 
Sbjct: 3030 VFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGE 3089

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSI 646
             G+LGHGD      P LV+AL  ++V  V CGS     + L +  S+
Sbjct: 3090 YGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSV 3136



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 98/181 (54%), Gaps = 7/181 (3%)

Query: 470 IVEVAGKTSGSN--GLSSKKL-FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           +V++A    G +   L++K + ++WG+G  G+LGHGD+     P  ++V  D +   +AC
Sbjct: 501 VVQIASHPDGKHYLALTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDRTVTYIAC 560

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGS--YHI 583
           G + + A+++TG++ + G   YG+LG         PT +     H  +  +ACGS     
Sbjct: 561 GSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHT-VTHVACGSGDSQT 619

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
             V++   V++WG G  G+LG G ++  + P +V+ L D+ V  V CG  F+AA+  H  
Sbjct: 620 LCVTNSGIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGE 679

Query: 644 V 644
           V
Sbjct: 680 V 680



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 17/167 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG+G    L  G  +G +          LPK+++  +  +   + CG + +  +T
Sbjct: 626 GIVFSWGDGDYGKLGRGGSDGSK----------LPKIVDKLLDQNVVKVFCGGQFSAALT 675

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G++++WG+G   +LGHG E  V +PKL++ L    +  ++ G  H  A+T    +Y W
Sbjct: 676 AHGEVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAITEDQLVYGW 735

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           G  D       LG V       P      + G  +  + CGP  + A
Sbjct: 736 GRNDACQIDPSLGAVVSEPTLCP-----TLSGKSVIGLVCGPMQSFA 777



 Score = 43.9 bits (102), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 14/120 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+V+ WG+G          +   +   +      PK++E       + ++ G+ H + +T
Sbjct: 678 GEVYTWGKG----------DHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAIT 727

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           +   ++ WG     ++   + A VS P L   L+G ++  + CG   + A ++S    TW
Sbjct: 728 EDQLVYGWGRNDACQIDPSLGAVVSEPTLCPTLSGKSVIGLVCGPMQSFAWSMS----TW 783


>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
           magnipapillata]
          Length = 2284

 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/388 (33%), Positives = 202/388 (52%), Gaps = 28/388 (7%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           DVF+WG    + L  G + G ++ S        P + +    L  + IA GSK    +T 
Sbjct: 559 DVFMWGLNDKDQL--GGLKGSKVKS--------PTLCDHLSSLQCKFIAGGSKSTFFITN 608

Query: 314 QGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLY 370
           +G+++S GE S GKLG G +  +V+ P+L+  LN   +  V+   G  H  A+T  G  +
Sbjct: 609 KGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAF 668

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG +  G LG  + +S   P  +   + G  ++ I CG  H+AAI     L+T+G G
Sbjct: 669 SWGDGEN--GQLGHGNLMSCSKPHLIEAFV-GKIVTDISCGSAHSAAIVENKYLYTWGLG 725

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD  +   P+ V        V  SCG    A  V +             K+++
Sbjct: 726 DFGRLGHGDEETILQPKFVTHFLGYNVVQVSCGS-RDAQTVCIT---------DDDKVWS 775

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WGDG  G+LG G +E  ++P+ V+    +  CK+ CG   T+ALT TG V++ G  D+ +
Sbjct: 776 WGDGDFGKLGRGGSERCLIPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYR 835

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG       + P  +EG ++ +++ DIA G+ H   V+   EV++WG   +GQLG G+ +
Sbjct: 836 LGHGTDIHVRQPKLVEG-LRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLGTGETD 894

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            K+ P L+  L + ++K V CGS+ + A
Sbjct: 895 VKKVPNLITGLHNHRIKYVACGSSHSIA 922



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 173/345 (50%), Gaps = 15/345 (4%)

Query: 295  VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA 354
            +L   ++        + T    +F+ G G+ G+LG G    V+ P+L++++   NI  ++
Sbjct: 1474 LLKEHNVKIDCDTVCITTDGALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKIS 1533

Query: 355  C--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
               G  H  A++  G++++WG+G    G LG  +  +   P+++     G  I++IC G 
Sbjct: 1534 VHSGGRHCLALSSDGEVFSWGEG--EDGKLGHGNRQTSSQPKRIEF-FCGKIITNICAGG 1590

Query: 413  WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
             H+AAI   G+L+T+G G +G LGHGD      P++VE L+    +  +CG         
Sbjct: 1591 SHSAAIGLNGELYTWGKGRYGRLGHGDSDDQLKPKQVEALQFFFVLDVACG--------- 1641

Query: 473  VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
             +G        +   +++WGDG  G+LG G ++   VP+ ++        KV CG   ++
Sbjct: 1642 -SGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQFSM 1700

Query: 533  ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
            ALT  G +++ G  DY +LG           +   + ++ +  I+CGS H  V + + EV
Sbjct: 1701 ALTKYGVLYTWGKGDYYRLGHGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDEGEV 1760

Query: 593  YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            Y WG    GQLG G    +QTPTL   L +K++  + CGS  T A
Sbjct: 1761 YCWGDNDEGQLGDGTIIARQTPTLNTFLLNKKIDRISCGSAHTIA 1805



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 165/333 (49%), Gaps = 24/333 (7%)

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           KQ  +F WG     +LG    + V  P L D L+      +A G   T  +T  G LY+ 
Sbjct: 556 KQVDVFMWGLNDKDQLGGLKGSKVKSPTLCDHLSSLQCKFIAGGSKSTFFITNKGKLYSC 615

Query: 373 GDGIHNLGLLGQVSEISHWI--PRKVSGQMEGLQIS--SICCGPWHTAAITSAGKLFTFG 428
           G+   + G LG + +I+  +  PR V+G +  L ++  S+  G  H  A+TS G  F++G
Sbjct: 616 GES--SFGKLG-IGDITGNVTSPRLVTG-LNQLIVTKVSVHSGGNHVMALTSDGLAFSWG 671

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           DG  G LGHG+  S S P  +E          SCG  H+AAIVE            +K L
Sbjct: 672 DGENGQLGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVE------------NKYL 719

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSA 546
           +TWG G  G+LGHGD E  + P  V      +  +V+CG   + T+ +T   +V+S G  
Sbjct: 720 YTWGLGDFGRLGHGDEETILQPKFVTHFLGYNVVQVSCGSRDAQTVCITDDDKVWSWGDG 779

Query: 547 DYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           D+G+LG  GS     P  +E  ++   I  I CG+     ++    V+TWGKG   +LGH
Sbjct: 780 DFGKLGRGGSERCLIPVEVE-QLRGLQICKILCGAQFTVALTKTGTVWTWGKGDFYRLGH 838

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G + + + P LVE LR K V  +  G+    A+
Sbjct: 839 GTDIHVRQPKLVEGLRGKHVIDIAVGALHCLAV 871



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 148/309 (47%), Gaps = 20/309 (6%)

Query: 287  PKVLESTVVLDAQSIAC--GSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
            P++LES   ++ + I+   G +H + ++  G++FSWGEG  GKLGHG     S PK I+ 
Sbjct: 1518 PRLLESIKHINIKKISVHSGGRHCLALSSDGEVFSWGEGEDGKLGHGNRQTSSQPKRIEF 1577

Query: 345  LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
              G  I  +  G  H+ A+ L+G+LYTWG G +  G LG         P++V   ++   
Sbjct: 1578 FCGKIITNICAGGSHSAAIGLNGELYTWGKGRY--GRLGHGDSDDQLKPKQVEA-LQFFF 1634

Query: 405  ISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
            +  + CG     T  IT+   ++++GDG +G LG G      VP  +E L     V   C
Sbjct: 1635 VLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVEC 1694

Query: 463  GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
            G   + A+ +               L+TWG G   +LGHG  E    P+ V    +    
Sbjct: 1695 GSQFSMALTKYG------------VLYTWGKGDYYRLGHGTEEHVRRPMMVTALFNKIVT 1742

Query: 523  KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
             ++CG    +  T  G+V+  G  D GQLG      +    +   + ++ I+ I+CGS H
Sbjct: 1743 SISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQTPTLNTFLLNKKIDRISCGSAH 1802

Query: 583  -IAVVSSKS 590
             IA  +SK+
Sbjct: 1803 TIAWSTSKA 1811



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/308 (34%), Positives = 156/308 (50%), Gaps = 22/308 (7%)

Query: 340  KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV-SG 398
            KLID L   +   + C    T  +T  G L  +  G  N G LG     +   PR + S 
Sbjct: 1469 KLIDNLLKEHNVKIDCD---TVCITTDGAL-VFATGYGNNGQLGLGYSETVTSPRLLESI 1524

Query: 399  QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV 458
            +   ++  S+  G  H  A++S G++F++G+G  G LGHG+R ++S P+ +E        
Sbjct: 1525 KHINIKKISVHSGGRHCLALSSDGEVFSWGEGEDGKLGHGNRQTSSQPKRIEFFCGKIIT 1584

Query: 459  MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
                G  H+AAI        G NG    +L+TWG G  G+LGHGD++ ++ P  V+    
Sbjct: 1585 NICAGGSHSAAI--------GLNG----ELYTWGKGRYGRLGHGDSDDQLKPKQVEALQF 1632

Query: 519  ISFCKVACG--HSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIED 575
                 VACG   + T+ +T    V+S G  DYG+LG  GS G K P  IE ++  + I  
Sbjct: 1633 FFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCKVPMIIE-DLSGKGIVK 1691

Query: 576  IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
            + CGS     ++    +YTWGKG   +LGHG  E+ + P +V AL +K V S+ CGS   
Sbjct: 1692 VECGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEHVRRPMMVTALFNKIVTSISCGS-LH 1750

Query: 636  AAICLHKG 643
              +C  +G
Sbjct: 1751 CVVCTDEG 1758



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 127/283 (44%), Gaps = 27/283 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G+VF WGEG  +G LG           +R+ +  PK +E        +I  G  H+  + 
Sbjct: 1548 GEVFSWGEG-EDGKLG---------HGNRQTSSQPKRIEFFCGKIITNICAGGSHSAAIG 1597

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLY 370
              G++++WG+G  G+LGHG   D   PK ++AL    +  VAC  G+  T  +T   +++
Sbjct: 1598 LNGELYTWGKGRYGRLGHGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDDNVW 1657

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+       +P  +   + G  I  + CG   + A+T  G L+T+G G
Sbjct: 1658 SWGDG--DYGKLGRGGSDGCKVPMIIE-DLSGKGIVKVECGSQFSMALTKYGVLYTWGKG 1714

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +  LGHG       P  V  L        SCG  H     +              +++ 
Sbjct: 1715 DYYRLGHGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTD------------EGEVYC 1762

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
            WGD  EGQLG G    R  P       +    +++CG + TIA
Sbjct: 1763 WGDNDEGQLGDGTIIARQTPTLNTFLLNKKIDRISCGSAHTIA 1805



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 15/222 (6%)

Query: 256 FIWGEGLGN-GLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VLVT 312
           +++  GLG+ G LG           D    L PK +   +  +   ++CGS+ A  V +T
Sbjct: 718 YLYTWGLGDFGRLG---------HGDEETILQPKFVTHFLGYNVVQVSCGSRDAQTVCIT 768

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
              +++SWG+G  GKLG G       P  ++ L G  I  + CG   T A+T +G ++TW
Sbjct: 769 DDDKVWSWGDGDFGKLGRGGSERCLIPVEVEQLRGLQICKILCGAQFTVALTKTGTVWTW 828

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           G G  +   LG  ++I    P+ V G + G  +  I  G  H  A+T  G++F++GD   
Sbjct: 829 GKG--DFYRLGHGTDIHVRQPKLVEG-LRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDH 885

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           G LG G+     VP  +  L   +    +CG  H+ A  E+ 
Sbjct: 886 GQLGTGETDVKKVPNLITGLHNHRIKYVACGSSHSIAWTEIT 927



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 88/174 (50%), Gaps = 8/174 (4%)

Query: 473 VAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVV-PLCVKVSDDISFCKVAC--GH 528
           +AG +  +  +++K KL++ G+ + G+LG GD    V  P  V   + +   KV+   G 
Sbjct: 596 IAGGSKSTFFITNKGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGG 655

Query: 529 SITIALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
           +  +ALT+ G  FS G  + GQLG  +  S  K P  IE  +  + + DI+CGS H A +
Sbjct: 656 NHVMALTSDGLAFSWGDGENGQLGHGNLMSCSK-PHLIEAFVG-KIVTDISCGSAHSAAI 713

Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
                +YTWG G  G+LGHGD E    P  V       V  V CGS     +C+
Sbjct: 714 VENKYLYTWGLGDFGRLGHGDEETILQPKFVTHFLGYNVVQVSCGSRDAQTVCI 767



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 17/206 (8%)

Query: 217  DDANSRSSTADSFRISLSSAVSS-SSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVE 275
            D    +   A  F   L  A  S  +Q  C  + D   +V+ WG+G    L  G  +G +
Sbjct: 1620 DQLKPKQVEALQFFFVLDVACGSGDAQTLCITNDD---NVWSWGDGDYGKLGRGGSDGCK 1676

Query: 276  ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
            +          P ++E         + CGS+ ++ +TK G +++WG+G   +LGHG E  
Sbjct: 1677 V----------PMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEH 1726

Query: 336  VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRK 395
            V  P ++ AL    +  ++CG  H    T  G++Y WGD  ++ G LG  + I+   P  
Sbjct: 1727 VRRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYCWGD--NDEGQLGDGTIIARQTP-T 1783

Query: 396  VSGQMEGLQISSICCGPWHTAAITSA 421
            ++  +   +I  I CG  HT A +++
Sbjct: 1784 LNTFLLNKKIDRISCGSAHTIAWSTS 1809



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 7/160 (4%)

Query: 488 LFTWGDGAEGQLGHGDAEPRVVP-LCVKVSDDISFCK-VACGHSITIALTATGQVFSMGS 545
           +F WG   + QLG         P LC  +S     CK +A G   T  +T  G+++S G 
Sbjct: 560 VFMWGLNDKDQLGGLKGSKVKSPTLCDHLSS--LQCKFIAGGSKSTFFITNKGKLYSCGE 617

Query: 546 ADYGQLGSPGSTGKFPT-RIEGNIKHRYIEDIAC--GSYHIAVVSSKSEVYTWGKGANGQ 602
           + +G+LG    TG   + R+   +    +  ++   G  H+  ++S    ++WG G NGQ
Sbjct: 618 SSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDGLAFSWGDGENGQ 677

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHK 642
           LGHG+  +   P L+EA   K V  + CGS  +AAI  +K
Sbjct: 678 LGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAIVENK 717



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 58/117 (49%), Gaps = 20/117 (17%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           G V+ WG+G    LG+G           +    R   L + L    V+D   IA G+ H 
Sbjct: 823 GTVWTWGKGDFYRLGHG-----------TDIHVRQPKLVEGLRGKHVID---IAVGALHC 868

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDALNGSNIHMVACGEFHTCAVT 364
           + VT+ G++FSWG+   G+LG G E DV   P LI  L+   I  VACG  H+ A T
Sbjct: 869 LAVTQDGEVFSWGDNDHGQLGTG-ETDVKKVPNLITGLHNHRIKYVACGSSHSIAWT 924


>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 439

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 125/358 (34%), Positives = 191/358 (53%), Gaps = 39/358 (10%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQ---SIACGSKHAVLVTK-QGQIFSWGEGSGGKLGH 330
           ++   D  D LLP  L +   LDAQ   S+ CG+ H +  ++ + +++SWG G  G+LGH
Sbjct: 46  QLGHGDTDDRLLPTQLSA---LDAQQIVSVVCGADHTLAYSESKVEVYSWGWGDFGRLGH 102

Query: 331 GVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH 390
           G  +D+  P+ I AL G  I  +ACG+ H  AVT+ G++ +WG   +  G LG  +    
Sbjct: 103 GNSSDLFIPQPIRALQGLRIKQIACGDSHCLAVTMEGEVQSWGR--NQNGQLGLGTTEDS 160

Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
            +P+K+    +G+ I  +  G  H+ AIT  G+L+ +G G +G LG GDR+   +P +V 
Sbjct: 161 LVPQKIQ-TFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVS 219

Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
              + K V+ +CG  HT ++             SS +L+T+G    GQLGHGD +  +VP
Sbjct: 220 VDCD-KMVLVACGWRHTISVS------------SSGELYTYGWSKYGQLGHGDCKDHLVP 266

Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG--------SPGSTGKFPT 562
             ++   D   C+V+ G   T+ALT  GQ++  G   +GQ+G        SP    KFP 
Sbjct: 267 HKLQAFSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGVGDNVDRCSPVQV-KFP- 324

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
                   + +  I+CG  H   V+ K  VY+WG+G NGQLG GD  +   P ++EAL
Sbjct: 325 ------HDQKVAQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIGDTIDWNYPKIIEAL 376



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 174/340 (51%), Gaps = 19/340 (5%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+ G  H+V +     + SWG G  G+LGHG   D   P  + AL+   I  V CG  HT
Sbjct: 20  ISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQLSALDAQQIVSVVCGADHT 79

Query: 361 CAVTLSG-DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
            A + S  ++Y+WG G  + G LG  +    +IP+ +   ++GL+I  I CG  H  A+T
Sbjct: 80  LAYSESKVEVYSWGWG--DFGRLGHGNSSDLFIPQPIRA-LQGLRIKQIACGDSHCLAVT 136

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G++ ++G    G LG G    + VP++++T + +   M + G  H+ AI E       
Sbjct: 137 MEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITE------- 189

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
            NG    +L+ WG G  G LG GD   R +P  V V  D     VACG   TI+++++G+
Sbjct: 190 -NG----ELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCD-KMVLVACGWRHTISVSSSGE 243

Query: 540 VFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           +++ G + YGQLG         P +++     + I  ++ G  H   +++  ++Y WG  
Sbjct: 244 LYTYGWSKYGQLGHGDCKDHLVPHKLQA-FSDKLICQVSGGWRHTMALTTGGQLYGWGWN 302

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             GQ+G GDN ++ +P  V+   D++V  + CG   T A+
Sbjct: 303 KFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAV 342



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 150/304 (49%), Gaps = 36/304 (11%)

Query: 254 DVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAV 309
           +V+ WG G    LG+G              +  D  +P+ + +   L  + IACG  H +
Sbjct: 88  EVYSWGWGDFGRLGHG--------------NSSDLFIPQPIRALQGLRIKQIACGDSHCL 133

Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
            VT +G++ SWG    G+LG G   D   P+ I    G  I MVA G  H+ A+T +G+L
Sbjct: 134 AVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGEL 193

Query: 370 YTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           Y WG G + NLGL  +       IP KVS   + + +  + CG  HT +++S+G+L+T+G
Sbjct: 194 YGWGWGRYGNLGLGDRNDRC---IPEKVSVDCDKMVL--VACGWRHTISVSSSGELYTYG 248

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
              +G LGHGD     VP +++   +      S G  HT A+      T+G       +L
Sbjct: 249 WSKYGQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMAL------TTGG------QL 296

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           + WG    GQ+G GD   R  P+ VK   D    +++CG   TIA+T    V+S G    
Sbjct: 297 YGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVAQISCGWRHTIAVTEKDNVYSWGRGTN 356

Query: 549 GQLG 552
           GQLG
Sbjct: 357 GQLG 360



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/291 (28%), Positives = 139/291 (47%), Gaps = 19/291 (6%)

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
           + +++ G  H+ A+     + +WG G    G LG        +P ++S  ++  QI S+ 
Sbjct: 17  VLLISAGGSHSVALISGNVVCSWGRG--EDGQLGHGDTDDRLLPTQLSA-LDAQQIVSVV 73

Query: 410 CGPWHTAAIT-SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTA 468
           CG  HT A + S  +++++G G FG LGHG+ S   +P+ +  L+ L+    +CG  H  
Sbjct: 74  CGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGDSHCL 133

Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH 528
           A+                ++ +WG    GQLG G  E  +VP  ++    +    VA G 
Sbjct: 134 AVT------------MEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTFQGVPIKMVAAGA 181

Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVS 587
             ++A+T  G+++  G   YG LG      +  P ++  +     +  +ACG  H   VS
Sbjct: 182 EHSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCDKMVL--VACGWRHTISVS 239

Query: 588 SKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           S  E+YT+G    GQLGHGD ++   P  ++A  DK +  V  G   T A+
Sbjct: 240 SSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMAL 290



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 3/119 (2%)

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYH 582
           ++ G S ++AL +   V S G  + GQLG   +  +  PT++   +  + I  + CG+ H
Sbjct: 20  ISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQLSA-LDAQQIVSVVCGADH 78

Query: 583 -IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +A   SK EVY+WG G  G+LGHG++ +   P  + AL+  ++K + CG +   A+ +
Sbjct: 79  TLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIACGDSHCLAVTM 137



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 34/46 (73%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           I+CG +H + VT++  ++SWG G+ G+LG G   D +YPK+I+AL+
Sbjct: 332 ISCGWRHTIAVTEKDNVYSWGRGTNGQLGIGDTIDWNYPKIIEALS 377


>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera]
 gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/355 (33%), Positives = 190/355 (53%), Gaps = 32/355 (9%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ-GQIFSWGEGSGGKLGHGVE 333
           ++   D  D L P  L +    +  S+ CG+ H    ++   Q++SWG G  G+LGHG  
Sbjct: 47  QLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQVYSWGWGDFGRLGHGNS 106

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +D+  P+ I AL+G  I  +ACG+ H  AVT+ G++ +WG   +  G LG  +     +P
Sbjct: 107 SDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGR--NQNGQLGLGTTEDSLVP 164

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           +K+    +G+ +  +  G  HTAA+T  G+L+ +G G +G LG GDR+   VP +V T++
Sbjct: 165 QKIQ-AFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVE 223

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +K V  +CG  HT ++             SS  L+T+G    GQLGHGD E  + P  +
Sbjct: 224 GVKMVKVACGWRHTISVS------------SSGGLYTYGWSKYGQLGHGDFEDHLTPHKL 271

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG--------SPGSTGKFPTRIE 565
           +   +    +++ G   T+ALT+ G+++  G   +GQ+G        SP    KFP   E
Sbjct: 272 EALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQV-KFPH--E 328

Query: 566 GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
             + H     I+CG  H   V+ +  V++WG+G NGQLGHG++ ++  P ++E L
Sbjct: 329 QKVVH-----ISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVL 378



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/344 (31%), Positives = 175/344 (50%), Gaps = 26/344 (7%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+ G+ H+V +     + SWG G  G+LGHG   D   P  + AL+G  +  V CG  HT
Sbjct: 21  ISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHT 80

Query: 361 CAVTLS-GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
            A + S   +Y+WG G  + G LG  +    + P+ +   + GL+I  I CG  H  A+T
Sbjct: 81  TAYSESFTQVYSWGWG--DFGRLGHGNSSDLFTPQPIK-ALHGLRIKQIACGDSHCLAVT 137

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G++ ++G    G LG G    + VP++++  + +   M + G  HTAA+ E       
Sbjct: 138 MDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTE------- 190

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                  +L+ WG G  G LG GD   R+VP  V   + +   KVACG   TI+++++G 
Sbjct: 191 -----DGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVKVACGWRHTISVSSSGG 245

Query: 540 VFSMGSADYGQLGSPGSTGKF-----PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
           +++ G + YGQLG     G F     P ++E  ++   I +I+ G  H   ++S  ++Y 
Sbjct: 246 LYTYGWSKYGQLGH----GDFEDHLTPHKLEA-LQENLISEISGGWRHTMALTSDGKLYG 300

Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           WG    GQ+G GDN +  +P  V+   +++V  + CG   T A+
Sbjct: 301 WGWNKFGQVGVGDNVDHCSPVQVKFPHEQKVVHISCGWRHTLAV 344



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 33/46 (71%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           I+CG +H + VT++  +FSWG G+ G+LGHG   D + PK+I+ L+
Sbjct: 334 ISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLS 379


>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
          Length = 4502

 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/391 (33%), Positives = 204/391 (52%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G   V++WG  L +    G   G +I         +P+ ++ TV L   S+A GSK   L
Sbjct: 2696 GAKRVYVWG--LNDKEQLGGPKGSKIK--------VPQAVDWTVSLQPISVAGGSKSLFL 2745

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT+ G+ ++ GEGS G+LG G   +V+ P  I AL+   +  VA   G  H  A+T  G 
Sbjct: 2746 VTQSGKAYACGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGR 2805

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +++WG+G  + G LG     S   PR +   + G ++  +  G  H+AA+TS+G+L+T+G
Sbjct: 2806 VFSWGEG--DDGKLGHGDVTSLDTPRCIEA-LNGFRVRDVAAGSNHSAAVTSSGELYTWG 2862

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGHGD  +   P+ VE+L   + V  SCG      +  V G      GL    +
Sbjct: 2863 LGEYGRLGHGDNLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALVEG------GL----V 2912

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G +E    P  V     +  C V CG   ++ALT  G V++ G  DY
Sbjct: 2913 YSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDY 2972

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    ++PT +EG ++ + +  ++ G+ H   V+   +V+ WG   +GQ G+G
Sbjct: 2973 FRLGH-GSDQHVRWPTLVEG-LRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQGNG 3030

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 + PTLV+ +   ++  V CGS+ + A
Sbjct: 3031 SITVNRRPTLVQGIDGIKITRVACGSSHSVA 3061



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 128/400 (32%), Positives = 203/400 (50%), Gaps = 29/400 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG V G ++         +P V E+   L    +A G +    
Sbjct: 3612 GGGQIYGWGHN-HRGQLGG-VEGAKVK--------VPTVCEALSALRPIQLAGGEQTLFA 3661

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            +T  G++++ G G+GG+LG G    V+ P L+++L    +  VA   G  H  A++  G+
Sbjct: 3662 ITSDGRVYATGYGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEGE 3721

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+G    G LG  +++    PR +   + G  +  + CG  H+AAIT+ G+L+T+G
Sbjct: 3722 VYSWGEG--EDGKLGHGNKLPCDRPRIIES-LRGKDVVDVACGGAHSAAITALGELYTWG 3778

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV--WHTAAIVEVAGKTSGSNGLSSK 486
             G +G LGHGD      P+ VE L   + +  +CG     T AI +  G T         
Sbjct: 3779 KGRYGRLGHGDSDDQLKPKLVEALLGYRVMDVACGSGDAQTCAITDEEGGT--------- 3829

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   +P  ++    +   KV CG   ++AL+  G V++ G  
Sbjct: 3830 -VWSWGDGDYGKLGRGGSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKG 3888

Query: 547  DYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
            DY +LG       + P ++   ++ + +  I+ G+ H  V + + EVYTWG    GQLG 
Sbjct: 3889 DYHRLGHGVDEHVRRPKKVM-TLQGKKVISISTGALHCVVCTDQGEVYTWGDNDEGQLGD 3947

Query: 606  GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVS 645
            G     Q P LV AL++K++  V CGS  T A    KG S
Sbjct: 3948 GTTTGIQKPRLVAALQNKKINRVSCGSAHTVAWSTCKGCS 3987



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 109/234 (46%), Gaps = 22/234 (9%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            ++++ A +++ +G      LG    S   VP+ V+    L+ +              VAG
Sbjct: 2692 SSVSGAKRVYVWGLNDKEQLGGPKGSKIKVPQAVDWTVSLQPI-------------SVAG 2738

Query: 476  KTSGSNGL----SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHS 529
               GS  L     S K +  G+G+ G+LG G +     P  +         KVA   G  
Sbjct: 2739 ---GSKSLFLVTQSGKAYACGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGR 2795

Query: 530  ITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
              +ALTA G+VFS G  D G+LG    T     R    +    + D+A GS H A V+S 
Sbjct: 2796 HALALTADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSAAVTSS 2855

Query: 590  SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
             E+YTWG G  G+LGHGDN  + TP  VE+L  ++V  V CGS     + L +G
Sbjct: 2856 GELYTWGLGEYGRLGHGDNLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALVEG 2909


>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
            niloticus]
          Length = 4936

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/392 (32%), Positives = 202/392 (51%), Gaps = 40/392 (10%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DVF+WG G  +G L  A           R+ L+P +  S     AQ + CG     ++  
Sbjct: 4073 DVFLWGAG-RHGQLAEA----------GRNILVPTIAPS--FSQAQQVVCGQNCTFVIQP 4119

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4120 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4179

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +T+ GKLFTFG+G
Sbjct: 4180 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4236

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P +V  L+       +CG+ HT  +             S+  +  
Sbjct: 4237 DYGRLGLGNTSNKKLPEKVTALEGYHVGQVACGLNHTLVV-------------SADGMMV 4283

Query: 491  W--GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            W  GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G+VF+ G    
Sbjct: 4284 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGKVFTFGQDRL 4343

Query: 549  GQLGSPGSTGK---FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
              +G P    +    P ++ G +   +I+D+A G+ H  V+SS  +VYTWG  + GQLG 
Sbjct: 4344 --IGLPEGRARNHNRPQQVPG-LSGIHIQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGL 4400

Query: 606  GDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            G   + + PTLV  L+ K +  +  G   +AA
Sbjct: 4401 GHTNHVREPTLVTTLQGKNIHQISAGRCHSAA 4432



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 189/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G           +   L PK+  S    DAQ+I  G     +++ 
Sbjct: 380 EVYVWGSNSSHQLVEGT----------QEKILQPKLASSFA--DAQTIEAGQYCTFVISS 427

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +       I  V+     + HT A T  G+++
Sbjct: 428 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVF 487

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA++  G+L+T+G+G
Sbjct: 488 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEG 545

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 546 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 592

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  V+    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 593 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 652

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 653 CGSSEATALRPKLIEELATTRVV-DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 711

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 712 PITKPKKVIGLDGVAIQQISAGTSHSLA 739



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 153/294 (52%), Gaps = 23/294 (7%)

Query: 302  ACGSK-HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
            +CGS  H++ +T+ G++FSWG+G  GKLGHG       P+ I+AL G  +  ++CG  H+
Sbjct: 4162 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4221

Query: 361  CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
              VT  G L+T+G+G  + G LG  +  +  +P KV+  +EG  +  + CG  HT  +++
Sbjct: 4222 AVVTADGKLFTFGNG--DYGRLGLGNTSNKKLPEKVTA-LEGYHVGQVACGLNHTLVVSA 4278

Query: 421  AGKL-FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G + + FGDG +G LG G+ ++ S P++V+ L         CG+     I +VA  T  
Sbjct: 4279 DGMMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL---------CGI----GIKKVACGTQF 4325

Query: 480  SNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
            S  L+   K+FT+G      L  G A     P  V     I    VA G   T+ L++TG
Sbjct: 4326 SVALTKDGKVFTFGQDRLIGLPEGRARNHNRPQQVPGLSGIHIQDVAVGAEHTLVLSSTG 4385

Query: 539  QVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
             V++ GS   GQLG  G T     PT +   ++ + I  I+ G  H A  ++ S
Sbjct: 4386 DVYTWGSNSEGQLGL-GHTNHVREPTLVT-TLQGKNIHQISAGRCHSAAWTAPS 4437



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 138/278 (49%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D++ WG G H     GQ++E      +P       +  Q+    CG   T  I   G + 
Sbjct: 4073 DVFLWGAGRH-----GQLAEAGRNILVPTIAPSFSQAQQV---VCGQNCTFVIQPNGTVL 4124

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4125 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4174

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +TA G++F+
Sbjct: 4175 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFT 4232

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE-VYTWGKGAN 600
             G+ DYG+LG    S  K P ++   ++  ++  +ACG  H  VVS+    V+ +G G  
Sbjct: 4233 FGNGDYGRLGLGNTSNKKLPEKVTA-LEGYHVGQVACGLNHTLVVSADGMMVWAFGDGDY 4291

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4292 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4329



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 152/303 (50%), Gaps = 28/303 (9%)

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           T  V+ + ++Y WG    +  + G   +I    P+  S   +   I +   G + T  I+
Sbjct: 372 TPVVSETCEVYVWGSNSSHQLVEGTQEKILQ--PKLASSFADAQTIEA---GQYCTFVIS 426

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV-WHTAAIVEVAGK 476
           S G +   G G++G LG GD ++ S  +++  E  + +K V +S G   HT A       
Sbjct: 427 SDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFT----- 481

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISFCKVACGHSITIAL 534
           T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  C V+ G+  + A+
Sbjct: 482 TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAV 533

Query: 535 TATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEV 592
           +  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS H IA+      V
Sbjct: 534 SEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGSSHTIALSKDGRTV 590

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSIC 652
           +++G G NG+LGHGD      P +VEAL+   ++ V  GS  + A+     V       C
Sbjct: 591 WSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC 650

Query: 653 SGC 655
            GC
Sbjct: 651 LGC 653


>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
            harrisii]
          Length = 4483

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 227/436 (52%), Gaps = 39/436 (8%)

Query: 207  SLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGL 266
            ++ F+AS   ++ + +++T    R   S   S+++  +          VF+WG    + L
Sbjct: 2674 AVPFLASDNEEEDDEKANTGSLIRKKASGLESAATIRT---------KVFVWGLNDKDQL 2724

Query: 267  LGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGG 326
              G + G +I         +P   E+   L+   +A GSK    VT +G++++ GE + G
Sbjct: 2725 --GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNG 2774

Query: 327  KLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLG 383
            +LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++WG+G  + G LG
Sbjct: 2775 RLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEG--DDGKLG 2832

Query: 384  QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
              S ++   PR +   ++  +I  I CG  H+AAITS+G+L+T+G G +G LGHGD ++ 
Sbjct: 2833 HFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQ 2891

Query: 444  SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FTWGDGAEGQLGHG 502
              P+ V+ L   + +  +CG            + + +  L+ + L F+WGDG  G+LG G
Sbjct: 2892 LKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFSWGDGDFGKLGRG 2940

Query: 503  DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFP 561
             +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +LG       + P
Sbjct: 2941 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKP 3000

Query: 562  TRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALR 621
              +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G     + PTLV+ L 
Sbjct: 3001 QVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3059

Query: 622  DKQVKSVVCGSNFTAA 637
             +++  V CGS+ + A
Sbjct: 3060 GQKITRVACGSSHSVA 3075



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 194/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3704 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALAALRPIQLIGGEQTLFA 3753

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 3754 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 3813

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  I  G  H+A IT+AG L+T+G
Sbjct: 3814 VYSWGEA--EDGKLGHGNRSPCDRPRVIES-LRGIEVVDIAAGGAHSACITAAGDLYTWG 3870

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGHGD      P+ VE L+  + +  +CG          +G            +
Sbjct: 3871 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG----------SGDAQTLCLTDDDTV 3920

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 3921 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 3980

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 3981 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4038

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K++  V CGS  T A
Sbjct: 4039 TTNAIQRPRLVAALQGKKINRVACGSAHTLA 4069



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 111/340 (32%), Positives = 169/340 (49%), Gaps = 36/340 (10%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2708 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 2767

Query: 372  WGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
             G+  +    LG          Q++ +S+++ +KV+          +  G  H  A+T  
Sbjct: 2768 CGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVA----------VHSGGRHAMALTVD 2817

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            GK+F++G+G  G LGH  R +   PR +E LK  +    +CG  H+AAI           
Sbjct: 2818 GKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT---------- 2867

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
              SS +L+TWG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G 
Sbjct: 2868 --SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 2925

Query: 540  VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            VFS G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG
Sbjct: 2926 VFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 2984

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               +LGHG + + + P +VE LR K++  V  G+    A+
Sbjct: 2985 DYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3024



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 161/352 (45%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 2756 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSNYVVKKVAVHSGGRHAMAL 2814

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   +F WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 2815 TVDG--KIFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 2862

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 2863 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 2922

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 2923 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 2979

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +             
Sbjct: 2980 TWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTG----------- 3028

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3029 -QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3079



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 108/229 (47%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2705 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 2751

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +    +    KVA   G    
Sbjct: 2752 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHA 2811

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            +ALT  G++FS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 2812 MALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 2871

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 2872 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 2920



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3705 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LAALRPIQLIGGEQTLFAVTADGKL 3760

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 3761 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 3809

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    +A G + +  +TA G +++
Sbjct: 3810 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYT 3868

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    +R I DIACGS       ++    V++WG G 
Sbjct: 3869 WGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI-DIACGSGDAQTLCLTDDDTVWSWGDGD 3927

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 3928 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3966



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 111/222 (50%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ +              + G+ +  
Sbjct: 3705 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQL------------IGGEQTLF 3752

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3753 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3812

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + DIA G  H A +++  ++YTWGKG
Sbjct: 3813 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKG 3872

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 3873 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 3914



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 10/97 (10%)

Query: 252 LGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
            G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ +V +
Sbjct: 408 FGQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSVAL 457

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
           TK GQ++SWG+G   +LGHG E  V YPKL++ L  +
Sbjct: 458 TKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQAT 494



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 2/85 (2%)

Query: 538 GQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           GQV+S G  DYG+LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WG
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWG 467

Query: 597 KGANGQLGHGDNENKQTPTLVEALR 621
           KG N +LGHG  E+ + P L+E L+
Sbjct: 468 KGDNQRLGHGTEEHVRYPKLLEGLQ 492



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 38/68 (55%)

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
           AV     GQ++SWG+G  GKLG G       PKLI+ L   ++  V CG   + A+T  G
Sbjct: 402 AVFSLIFGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDG 461

Query: 368 DLYTWGDG 375
            +Y+WG G
Sbjct: 462 QVYSWGKG 469



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 18/123 (14%)

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           ++++WGDG  G+LG G ++    P  ++   D+   KV CG   ++ALT  GQV+S G  
Sbjct: 410 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKG 469

Query: 547 DYGQLGSPGSTG-KFPTRIEG-----------------NIKHRYIEDIACGSYHIAVVSS 588
           D  +LG       ++P  +EG                  +  ++I  IACG       SS
Sbjct: 470 DNQRLGHGTEEHVRYPKLLEGLQATLPQANCLSKKXXXXLDTKHIVGIACGPAQSFAWSS 529

Query: 589 KSE 591
            SE
Sbjct: 530 CSE 532



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 12/84 (14%)

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+++++GDG +G LG G       P+ +E L++L  V   CG   + A+ +         
Sbjct: 409 GQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTK--------- 459

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAE 505
                ++++WG G   +LGHG  E
Sbjct: 460 ---DGQVYSWGKGDNQRLGHGTEE 480



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 32/48 (66%)

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +V++WG G  G+LG G ++  +TP L+E L+D  V  V CGS F+ A+
Sbjct: 410 QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVAL 457



 Score = 43.9 bits (102), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 3/87 (3%)

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
           G +++WGDG  + G LG+        P+ +  +++ L +  + CG   + A+T  G++++
Sbjct: 409 GQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYS 465

Query: 427 FGDGTFGALGHGDRSSTSVPREVETLK 453
           +G G    LGHG       P+ +E L+
Sbjct: 466 WGKGDNQRLGHGTEEHVRYPKLLEGLQ 492


>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Brachypodium distachyon]
          Length = 449

 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/348 (33%), Positives = 186/348 (53%), Gaps = 18/348 (5%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ-GQIFSWGEGSGGKLGHGVE 333
           ++   D  D L+P V+         S+ CG+ H    +++  Q++SWG G  G+LGHG  
Sbjct: 52  QLGHGDAEDRLVPTVISGFDAPRITSVICGADHTTAYSEEEQQVYSWGWGDFGRLGHGNS 111

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +DV  P+ + AL G  I  +ACG+ H  AVT+ G++ +WG   +  G LG  +     +P
Sbjct: 112 SDVFTPQPVRALQGIKIKQMACGDSHCLAVTMGGEVQSWGR--NQNGQLGLGTTEDSLLP 169

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           +K+    EG+ +  I  G  HTAA+T  G L+ +G G +G LG GDR+   VP +V  ++
Sbjct: 170 QKIQA-FEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVE 228

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
             K V+ +CG  HT  +             SS  L+T+G    GQLGHGD E  + P  V
Sbjct: 229 GEKMVLIACGWRHTITVS------------SSGILYTYGWSKYGQLGHGDFEDHLFPHKV 276

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRY 572
           +   D S  +++ G   T+ALT+ G+++  G   +GQ+G+  S     P ++    + + 
Sbjct: 277 EALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQK- 335

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           +  +ACG  H    + K  V+ WG+G +GQLGHG+  ++  P +++A+
Sbjct: 336 VAQVACGWRHTLAYTEKKNVFAWGRGTSGQLGHGEIVDRNKPLMIDAI 383



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 167/346 (48%), Gaps = 18/346 (5%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++ G+ H+V + +   + SWG G  G+LGHG   D   P +I   +   I  V CG  HT
Sbjct: 26  VSAGASHSVALLEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVICGADHT 85

Query: 361 CAVTLS-GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
            A +     +Y+WG G  + G LG  +    + P+ V   ++G++I  + CG  H  A+T
Sbjct: 86  TAYSEEEQQVYSWGWG--DFGRLGHGNSSDVFTPQPVRA-LQGIKIKQMACGDSHCLAVT 142

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G++ ++G    G LG G    + +P++++  + +   M + G  HTAA+ E       
Sbjct: 143 MGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAVTE------- 195

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                   L+ WG G  G LG GD   R VP  V + +      +ACG   TI ++++G 
Sbjct: 196 -----DGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSSSGI 250

Query: 540 VFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           +++ G + YGQLG        FP ++E  +K      I+ G  H   ++S  ++Y WG  
Sbjct: 251 LYTYGWSKYGQLGHGDFEDHLFPHKVEA-LKDSSTSQISGGWRHTMALTSDGKLYGWGWN 309

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
             GQ+G GD+ +  +P  V    +++V  V CG   T A    K V
Sbjct: 310 KFGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKKNV 355



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 136/290 (46%), Gaps = 16/290 (5%)

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
           + +V+ G  H+ A+     L +WG G    G LG        +P  +SG  +  +I+S+ 
Sbjct: 23  VVLVSAGASHSVALLEGNVLCSWGRG--EDGQLGHGDAEDRLVPTVISG-FDAPRITSVI 79

Query: 410 CGPWHTAAITSA-GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTA 468
           CG  HT A +    +++++G G FG LGHG+ S    P+ V  L+ +K    +CG  H  
Sbjct: 80  CGADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGDSHCL 139

Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH 528
           A+      T G       ++ +WG    GQLG G  E  ++P  ++  + I    +A G 
Sbjct: 140 AV------TMGG------EVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGICVKMIAAGA 187

Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
             T A+T  G ++  G   YG LG      +F       ++   +  IACG  H   VSS
Sbjct: 188 EHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMVLIACGWRHTITVSS 247

Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
              +YT+G    GQLGHGD E+   P  VEAL+D     +  G   T A+
Sbjct: 248 SGILYTYGWSKYGQLGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMAL 297



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 39/72 (54%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           ++ + D  D   P  +          +ACG +H +  T++  +F+WG G+ G+LGHG   
Sbjct: 313 QVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEKKNVFAWGRGTSGQLGHGEIV 372

Query: 335 DVSYPKLIDALN 346
           D + P +IDA++
Sbjct: 373 DRNKPLMIDAIS 384


>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
          Length = 545

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/356 (33%), Positives = 173/356 (48%), Gaps = 78/356 (21%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           V+ WG G    L      G+  +S   R   +  + E  +V     IACGS H V++T +
Sbjct: 3   VYSWGRGEDGQL------GLGDTSDQHRPVPIDALAERRIV----QIACGSGHTVVLTDE 52

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           G++++WG G  G+LGHG       P+L++ L G NI  V CG +HT AVT+SGDLYTWG 
Sbjct: 53  GEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGG 112

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP---------------------- 412
           G++  G LG  +E  H  P  V   ++G+Q+  + CG                       
Sbjct: 113 GMY--GKLGHGNETGHSTPFLVE-TLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGV 169

Query: 413 -------------------------------WHTAAITSAGKLFTFGDGTFGALGHGDRS 441
                                          +HTAA++  G++FTFG+G FG LGH    
Sbjct: 170 SGHGDTEGHQYLPCPVEELRGKNIVQISACGFHTAALSEFGEVFTFGEGKFGRLGHNSER 229

Query: 442 STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH 501
           +  V R VE L   +    +CG +HTAA+ E            + +++TWG G  GQLGH
Sbjct: 230 NQPVARFVEALAGKRVKQVACGGFHTAAVTE------------TGEVYTWGGGEHGQLGH 277

Query: 502 GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGST 557
           GD   + VP  V+   +    ++ CG S T+ALT TG+V++ G+ D+G+LG   +T
Sbjct: 278 GDKVNKTVPTRVESLVEKLVVQITCGWSHTVALTDTGEVYTWGNGDHGKLGHNDTT 333



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 117/219 (53%), Gaps = 12/219 (5%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           DV+ WG+           NGV           LP  +E     +   I+    H   +++
Sbjct: 158 DVYTWGD---------KENGVSGHGDTEGHQYLPCPVEELRGKNIVQISACGFHTAALSE 208

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G++F++GEG  G+LGH  E +    + ++AL G  +  VACG FHT AVT +G++YTWG
Sbjct: 209 FGEVFTFGEGKFGRLGHNSERNQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWG 268

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
            G H  G LG   +++  +P +V   +E L +  I CG  HT A+T  G+++T+G+G  G
Sbjct: 269 GGEH--GQLGHGDKVNKTVPTRVESLVEKL-VVQITCGWSHTVALTDTGEVYTWGNGDHG 325

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
            LGH D +  ++P+ V+ L+  + +  +    HT A+V+
Sbjct: 326 KLGHNDTTKVTLPKLVDVLEGKRVISVASYNEHTVALVD 364



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 89/157 (56%)

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           +++WG G +GQLG GD   +  P+ +    +    ++ACG   T+ LT  G+V++ G  D
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGRGD 62

Query: 548 YGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG   +  KF  R+   ++ + I  + CGSYH A V+   ++YTWG G  G+LGHG+
Sbjct: 63  DGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKLGHGN 122

Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
                TP LVE L+  QV+ V CGS  T  +  +K V
Sbjct: 123 ETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENKDV 159


>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
          Length = 4706

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2962 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3071

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AAITS+G+L+T+G G 
Sbjct: 3072 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3128

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3177

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3178 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3237

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3238 LGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTT 3296

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3297 VNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/340 (32%), Positives = 169/340 (49%), Gaps = 36/340 (10%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3016

Query: 372  WGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
             G+  +    LG          Q++ +S+++ +KV+          +  G  H  A+T  
Sbjct: 3017 CGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVA----------VHSGGRHAMALTVD 3066

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            GK+F++G+G  G LGH  R +   PR +E LK  +    +CG  H+AAI           
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT---------- 3116

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
              SS +L+TWG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G 
Sbjct: 3117 --SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 540  VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            VFS G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               +LGHG + + + P +VE LR K++  V  G+    A+
Sbjct: 3234 DYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 173/355 (48%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G+++               +D   P+L+  L 
Sbjct: 443 PIQCEGLANLGITQIACAEKRFLILSRNGRVYM----------QAYNSDTLGPQLVQGLA 492

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++++WG G  + G LG    +    P+ +S   G+  
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVFSWGCG--DGGRLGHGDTVPLEEPKMISALSGKQA 550

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  S
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 610

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 611 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   ++ALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVVDVAA 717

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  PT +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRITKPEPTALPGLDTKHIVGIACG 770



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 161/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG     A   D L P++++     +   IA  S   H + +   G++FSWG G GG+LG
Sbjct: 470 NGRVYMQAYNSDTLGPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLG 529

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I AL+G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 530 HGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 587

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 588 SSEDQTIPMLVTG-LKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 647 KTPKLIEKLQDLDVVKVRCGSQFSVALTK------------DGQVYSWGKGDNQRLGHGT 694

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   PT
Sbjct: 695 EEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPT 754

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 755 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 782



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 161/352 (45%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3005 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSNYVVKKVAVHSGGRHAMAL 3063

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3064 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3111

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3112 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3172 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +             
Sbjct: 3229 TWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTG----------- 3277

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3278 -QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3328



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 161/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    I  +AC E     ++ +G +Y     
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGITQIACAEKRFLILSRNGRVYMQAYN 479

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
              LG            P+ V G +    I  I       H  A+ + G++F++G G  G
Sbjct: 480 SDTLG------------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGG 526

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 527 RLGHGD----TVP-----LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E + +P+ V     +    V+CG   + T+A+T  GQV+S G  DYG+
Sbjct: 578 RGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 638 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEE 696

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 697 HVRYPKLLEGLQGKKVVDVAAGSTHCLAL 725



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 121/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+VF WG G G  L  G  + V +       AL  K     VV 
Sbjct: 499 IAAHSDGHHYLALAATGEVFSWGCGDGGRL--GHGDTVPLEEPKMISALSGKQAGKHVV- 555

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  V+C 
Sbjct: 556 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 612

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 669

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K V  + G  H  A+ E
Sbjct: 670 SVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTE 727



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/237 (30%), Positives = 108/237 (45%), Gaps = 23/237 (9%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ +    G   T   V   GK    
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGE-QTLFAVTADGKVEAL 4012

Query: 481  NGL------------------SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
             G                       +++WGDG  G+LG G ++   VP+ +     +   
Sbjct: 4013 QGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVV 4072

Query: 523  KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGS 580
            KV CG   ++ALT +G V++ G  DY +LG  GS    + P +++G ++ + +  IA GS
Sbjct: 4073 KVECGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGS 4130

Query: 581  YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             H    +   EVYTWG    GQLG G     Q P LV AL+ K++  V CGS  T A
Sbjct: 4131 LHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4187



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 108/229 (47%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 3000

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +    +    KVA   G    
Sbjct: 3001 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHA 3060

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            +ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3061 MALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 3120

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169



 Score = 93.2 bits (230), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 119/286 (41%), Gaps = 61/286 (21%)

Query: 315  GQIFSWGEGSGGKLGHGVE-ADVSYP------------KLI---------------DALN 346
            G I+ WG    G+LG G+E A V  P            +LI               +AL 
Sbjct: 3955 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEALQ 4013

Query: 347  GSNIHMVACG--EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
            G  +  +ACG  +  T  +T    +++WGDG  + G LG+       +P K+   + GL 
Sbjct: 4014 GYRVIDIACGSGDAQTLCLTDDDTVWSWGDG--DYGKLGRGGSDGCKVPMKIDS-LTGLG 4070

Query: 405  ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
            +  + CG   + A+T +G ++T+G G +  LGHG       PR+V+ L+  K +  + G 
Sbjct: 4071 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGS 4130

Query: 465  WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
             H     E              +++TWGD  EGQLG G       P  V         +V
Sbjct: 4131 LHCVCCTE------------DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRV 4178

Query: 525  ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH 570
            ACG + T+A + +                P + GK PT++     H
Sbjct: 4179 ACGSAHTLAWSTS---------------KPANAGKLPTQVPMEYNH 4209



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 38/245 (15%)

Query: 219  ANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISS 278
            A+ +      +R+   +  S  +Q  C  D D    V+ WG+G    L  G  +G ++  
Sbjct: 4005 ADGKVEALQGYRVIDIACGSGDAQTLCLTDDD---TVWSWGDGDYGKLGRGGSDGCKV-- 4059

Query: 279  ADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY 338
                    P  ++S   L    + CGS+ +V +TK G +++WG+G   +LGHG +  V  
Sbjct: 4060 --------PMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRR 4111

Query: 339  PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
            P+ +  L G  +  +A G  H    T  G++YTWGD  ++ G LG  +  +   PR V+ 
Sbjct: 4112 PRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGD--NDEGQLGDGTTNAIQRPRLVAA 4169

Query: 399  QMEGLQISSICCGPWHTAAITS-----AGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
             ++G +I+ + CG  HT A ++     AGKL                  T VP E   L+
Sbjct: 4170 -LQGKKINRVACGSAHTLAWSTSKPANAGKL-----------------PTQVPMEYNHLQ 4211

Query: 454  ELKTV 458
            E+  +
Sbjct: 4212 EIPII 4216



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ +V +T
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSVALT 674

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSW 734

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     I+   P  + G ++   I  I CGP  + A +S
Sbjct: 735 GSNDQCQHFDTL----RITKPEPTALPG-LDTKHIVGIACGPAQSFAWSS 779



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 15/178 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VL 310
           G+++ WG G   G LG        SS D+   +L   L+   V+D   ++CGS  A  + 
Sbjct: 571 GELYTWGRG-NYGRLGHG------SSEDQTIPMLVTGLKGLKVID---VSCGSGDAQTLA 620

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           VT+ GQ++SWG+G  GKLG G       PKLI+ L   ++  V CG   + A+T  G +Y
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVY 680

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +WG G +    LG  +E     P+ + G ++G ++  +  G  H  A+T   ++ ++G
Sbjct: 681 SWGKGDNQ--RLGHGTEEHVRYPKLLEG-LQGKKVVDVAAGSTHCLALTEDSEVHSWG 735



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 27/156 (17%)

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S  ++ WG    GQLG  +     VP   +    +   ++  G     A+TA G+V ++ 
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEALQ 4013

Query: 545  SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGANGQ 602
                                     +R I DIACGS       ++    V++WG G  G+
Sbjct: 4014 G------------------------YRVI-DIACGSGDAQTLCLTDDDTVWSWGDGDYGK 4048

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4049 LGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4084


>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
          Length = 4839

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2965 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3014

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFS 3074

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AAITS+G+L+T+G G 
Sbjct: 3075 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3132 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3180

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3181 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3240

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3241 LGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTT 3299

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3300 VNRKPTLVQGLEGQKITRVACGSSHSVA 3327



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 127/391 (32%), Positives = 195/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3955 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 4004

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4005 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4064

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  I  G  H+A IT+AG LFT+G
Sbjct: 4065 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDIAAGGAHSACITAAGDLFTWG 4121

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGHGD      P+ VE L+  + +  +CG          +G            +
Sbjct: 4122 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG----------SGDAQTLCLTDDDTV 4171

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +    D+   KV CG   ++ALT +G V++ G  DY
Sbjct: 4172 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4231

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4232 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4289

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K++  V CGS  T A
Sbjct: 4290 TTNAIQRPRLVAALQGKKINRVACGSAHTLA 4320



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/340 (32%), Positives = 169/340 (49%), Gaps = 36/340 (10%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2960 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3019

Query: 372  WGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
             G+  +    LG          Q++ +S+++ +KV+          +  G  H  A+T  
Sbjct: 3020 CGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVA----------VHSGGRHAMALTVD 3069

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            GK+F++G+G  G LGH  R +   PR +E LK  +    +CG  H+AAI           
Sbjct: 3070 GKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT---------- 3119

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
              SS +L+TWG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G 
Sbjct: 3120 --SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 540  VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            VFS G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               +LGHG + + + P +VE LR K++  V  G+    A+
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3276



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 175/355 (49%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+ +L 
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYT----------QAYNSDTLGPQLVQSLA 492

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A++ +G++++WG G  + G LG    +    P+ +S   G+  
Sbjct: 493 SRNIVKIAAHSDGHHYLALSANGEVFSWGCG--DGGRLGHGDTVPLEEPKLISALSGKQA 550

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  S
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 610

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 611 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV++ G  D  +LG       ++P  +EG +K + + D+A 
Sbjct: 659 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEG-LKGKKVIDVAA 717

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACG 770



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/327 (32%), Positives = 166/327 (50%), Gaps = 30/327 (9%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++ +WG      +G    A+VS P   + L    +  +AC E     ++ +G +YT    
Sbjct: 425 EVIAWG-----LIGWKYYANVSGPIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYN 479

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
              LG     S  S  I  K++   +G           H  A+++ G++F++G G  G L
Sbjct: 480 SDTLGPQLVQSLASRNI-VKIAAHSDG----------HHYLALSANGEVFSWGCGDGGRL 528

Query: 436 GHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWGDG 494
           GHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG G
Sbjct: 529 GHGD----TVP-----LEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG 579

Query: 495 AEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQLG 552
             G+LGHG +E + +P+ V     +    V+CG   + T+A+T  GQV+S G  DYG+LG
Sbjct: 580 NYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLG 639

Query: 553 SPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
             GS G K P  IE  ++   I  + CGS     ++   +VYTWGKG N +LGHG  E+ 
Sbjct: 640 RGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHV 698

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + P L+E L+ K+V  V  GS    A+
Sbjct: 699 RYPKLLEGLKGKKVIDVAAGSTHCLAL 725



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 161/352 (45%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3008 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSNYVVKKVAVHSGGRHAMAL 3066

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   +F WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3067 TVDG--KIFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3114

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3115 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3174

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3175 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3231

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +             
Sbjct: 3232 TWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTG----------- 3280

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3281 -QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3331



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 121/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+VF WG G G  L  G  + V +       AL  K     VV 
Sbjct: 499 IAAHSDGHHYLALSANGEVFSWGCGDGGRL--GHGDTVPLEEPKLISALSGKQAGKHVV- 555

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  V+C 
Sbjct: 556 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 612

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L I  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQF 669

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++T+G G    LGHG       P+ +E LK  K +  + G  H  A+ E
Sbjct: 670 SIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE 727



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 108/229 (47%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 3003

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +    +    KVA   G    
Sbjct: 3004 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHA 3063

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            +ALT  G++FS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3064 MALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 3123

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3124 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3172



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 133/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3956 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4011

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4012 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4060

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    +A G + +  +TA G +F+
Sbjct: 4061 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFT 4119

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    +R I DIACGS       ++    V++WG G 
Sbjct: 4120 WGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI-DIACGSGDAQTLCLTDDDTVWSWGDGD 4178

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L D  V  V CGS F+ A+
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVAL 4217



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 111/222 (50%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 4003

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 4004 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + DIA G  H A +++  +++TWGKG
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKG 4123

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4124 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4165



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDIVKVRCGSQFSIALT 674

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ+++WG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 675 KDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     I+   P  + G ++   I  I CGP  + A +S
Sbjct: 735 GSNDQCQHFDTL----RITKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 779



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 23/182 (12%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           G+++ WG G    LG+G           SS D+   +L   L+   V+D   ++CGS  A
Sbjct: 571 GELYTWGRGNYGRLGHG-----------SSEDQTIPMLVTGLKGLKVID---VSCGSGDA 616

Query: 309 --VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
             + VT+ GQ++SWG+G  GKLG G       PKLI+ L   +I  V CG   + A+T  
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKD 676

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
           G +YTWG G +    LG  +E     P+ + G ++G ++  +  G  H  A+T   ++ +
Sbjct: 677 GQVYTWGKGDNQ--RLGHGTEEHVRYPKLLEG-LKGKKVIDVAAGSTHCLALTEDSEVHS 733

Query: 427 FG 428
           +G
Sbjct: 734 WG 735


>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
            gallopavo]
          Length = 4815

 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2941 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2990

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 2991 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFS 3050

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AAITS+G+L+T+G G 
Sbjct: 3051 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3107

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3108 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3156

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3157 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3216

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3217 LGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTT 3275

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3276 VNRKPTLVQGLEGQKITRVACGSSHSVA 3303



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/391 (32%), Positives = 194/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3931 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 3980

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 3981 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4040

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  I  G  H+A IT+AG LFT+G
Sbjct: 4041 VYSWGEA--EDGKLGHGNRSPCDRPRVIES-LRGIEVVDIAAGGAHSACITAAGDLFTWG 4097

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGHGD      P+ VE L+  + +  +CG          +G            +
Sbjct: 4098 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG----------SGDAQTLCLTDDDTV 4147

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4148 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4207

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4208 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4265

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K++  V CGS  T A
Sbjct: 4266 TTNAIQRPRLVAALQGKKINRVACGSAHTLA 4296



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/340 (32%), Positives = 169/340 (49%), Gaps = 36/340 (10%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2936 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 2995

Query: 372  WGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
             G+  +    LG          Q++ +S+++ +KV+          +  G  H  A+T  
Sbjct: 2996 CGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVA----------VHSGGRHAMALTVD 3045

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            GK+F++G+G  G LGH  R +   PR +E LK  +    +CG  H+AAI           
Sbjct: 3046 GKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT---------- 3095

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
              SS +L+TWG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G 
Sbjct: 3096 --SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3153

Query: 540  VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            VFS G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG
Sbjct: 3154 VFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3212

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               +LGHG + + + P +VE LR K++  V  G+    A+
Sbjct: 3213 DYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3252



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 175/355 (49%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+ +L 
Sbjct: 419 PIQCEGLASLGVVQIACAEKRFLILSRNGRVYT----------QAYNSDTLGPQLVQSLA 468

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A++ +G++++WG G  + G LG    +    P+ +S   G+  
Sbjct: 469 SRNIVKIAAHSDGHHYLALSANGEVFSWGCG--DGGRLGHGDTVPLEEPKLISALSGKQA 526

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  S
Sbjct: 527 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 586

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 587 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 634

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV++ G  D  +LG       ++P  +EG +K + + D+A 
Sbjct: 635 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEG-LKGKKVIDVAA 693

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 694 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACG 746



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/327 (32%), Positives = 166/327 (50%), Gaps = 30/327 (9%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++ +WG      +G    A+VS P   + L    +  +AC E     ++ +G +YT    
Sbjct: 401 EVIAWG-----LIGWKYYANVSGPIQCEGLASLGVVQIACAEKRFLILSRNGRVYTQAYN 455

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
              LG     S  S  I  K++   +G           H  A+++ G++F++G G  G L
Sbjct: 456 SDTLGPQLVQSLASRNI-VKIAAHSDG----------HHYLALSANGEVFSWGCGDGGRL 504

Query: 436 GHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWGDG 494
           GHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG G
Sbjct: 505 GHGD----TVP-----LEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG 555

Query: 495 AEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQLG 552
             G+LGHG +E + +P+ V     +    V+CG   + T+A+T  GQV+S G  DYG+LG
Sbjct: 556 NYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLG 615

Query: 553 SPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
             GS G K P  IE  ++   I  + CGS     ++   +VYTWGKG N +LGHG  E+ 
Sbjct: 616 RGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHV 674

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + P L+E L+ K+V  V  GS    A+
Sbjct: 675 RYPKLLEGLKGKKVIDVAAGSTHCLAL 701



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 161/352 (45%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 2984 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSNYVVKKVAVHSGGRHAMAL 3042

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   +F WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3043 TVDG--KIFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3090

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3091 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3150

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3151 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3207

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +             
Sbjct: 3208 TWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTG----------- 3256

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3257 -QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3307



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 121/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+VF WG G G  L  G  + V +       AL  K     VV 
Sbjct: 475 IAAHSDGHHYLALSANGEVFSWGCGDGGRL--GHGDTVPLEEPKLISALSGKQAGKHVV- 531

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  V+C 
Sbjct: 532 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 588

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L I  + CG   
Sbjct: 589 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQF 645

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++T+G G    LGHG       P+ +E LK  K +  + G  H  A+ E
Sbjct: 646 SIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE 703



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 108/229 (47%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2933 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 2979

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +    +    KVA   G    
Sbjct: 2980 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHA 3039

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            +ALT  G++FS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3040 MALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 3099

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3100 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3148



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3932 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 3987

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 3988 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4036

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    +A G + +  +TA G +F+
Sbjct: 4037 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFT 4095

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    +R I DIACGS       ++    V++WG G 
Sbjct: 4096 WGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI-DIACGSGDAQTLCLTDDDTVWSWGDGD 4154

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4155 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4193



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 111/222 (50%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3932 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 3979

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3980 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4039

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + DIA G  H A +++  +++TWGKG
Sbjct: 4040 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKG 4099

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4100 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4141



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 601 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDIVKVRCGSQFSIALT 650

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ+++WG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 651 KDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSW 710

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     I+   P  + G ++   I  I CGP  + A +S
Sbjct: 711 GSNDQCQHFDTL----RITKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 755



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 15/178 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VL 310
           G+++ WG G   G LG        SS D+   +L   L+   V+D   ++CGS  A  + 
Sbjct: 547 GELYTWGRG-NYGRLGHG------SSEDQTIPMLVTGLKGLKVID---VSCGSGDAQTLA 596

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           VT+ GQ++SWG+G  GKLG G       PKLI+ L   +I  V CG   + A+T  G +Y
Sbjct: 597 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVY 656

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           TWG G +    LG  +E     P+ + G ++G ++  +  G  H  A+T   ++ ++G
Sbjct: 657 TWGKGDNQ--RLGHGTEEHVRYPKLLEG-LKGKKVIDVAAGSTHCLALTEDSEVHSWG 711


>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
          Length = 4840

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2965 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3014

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3074

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AAITS+G+L+T+G G 
Sbjct: 3075 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3132 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3180

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3181 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3240

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3241 LGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTT 3299

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3300 VNRKPTLVQGLEGQKITRVACGSSHSVA 3327



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/340 (32%), Positives = 169/340 (49%), Gaps = 36/340 (10%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2960 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3019

Query: 372  WGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
             G+  +    LG          Q++ +S+++ +KV+          +  G  H  A+T  
Sbjct: 3020 CGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVA----------VHSGGRHAMALTVD 3069

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            GK+F++G+G  G LGH  R +   PR +E LK  +    +CG  H+AAI           
Sbjct: 3070 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT---------- 3119

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
              SS +L+TWG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G 
Sbjct: 3120 --SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 540  VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            VFS G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               +LGHG + + + P +VE LR K++  V  G+    A+
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3276



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 124/392 (31%), Positives = 193/392 (49%), Gaps = 30/392 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3955 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 4004

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4005 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4064

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A IT+AG LFT+G
Sbjct: 4065 VYSWGEA--EDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACITAAGDLFTWG 4121

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGHGD      P+ VE L+  + +  +CG          +G            +
Sbjct: 4122 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG----------SGDAQTLCLTDDDTV 4171

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS-AD 547
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++     D
Sbjct: 4172 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRD 4231

Query: 548  YGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
            Y +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG 
Sbjct: 4232 YHRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGD 4289

Query: 606  GDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            G     Q P LV AL+ K++  V CGS  T A
Sbjct: 4290 GTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4321



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 175/355 (49%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    +AC  K  +++++ G++++              +D   P+L+ +L 
Sbjct: 443 PIQCEGLANLGVVQVACAEKRFLILSRNGRVYT----------QAYNSDTLGPQLVQSLA 492

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A++ +G++++WG G  + G LG    +    P+ +S   G+  
Sbjct: 493 SRNIVKIAAHSDGHHYLALSANGEVFSWGCG--DGGRLGHGDTVPLEEPKMISALSGKQA 550

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  S
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 610

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 611 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV++ G  D  +LG       ++P  +EG +K + + D+A 
Sbjct: 659 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEG-LKGKKVIDVAA 717

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 166/327 (50%), Gaps = 30/327 (9%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++ +WG      +G    A+VS P   + L    +  VAC E     ++ +G +YT    
Sbjct: 425 EVIAWG-----LIGWKYYANVSGPIQCEGLANLGVVQVACAEKRFLILSRNGRVYTQAYN 479

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
              LG     S  S  I  K++   +G           H  A+++ G++F++G G  G L
Sbjct: 480 SDTLGPQLVQSLASRNI-VKIAAHSDG----------HHYLALSANGEVFSWGCGDGGRL 528

Query: 436 GHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWGDG 494
           GHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG G
Sbjct: 529 GHGD----TVP-----LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG 579

Query: 495 AEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQLG 552
             G+LGHG +E + +P+ V     +    V+CG   + T+A+T  GQV+S G  DYG+LG
Sbjct: 580 NYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLG 639

Query: 553 SPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
             GS G K P  IE  ++   I  + CGS     ++   +VYTWGKG N +LGHG  E+ 
Sbjct: 640 RGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHV 698

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + P L+E L+ K+V  V  GS    A+
Sbjct: 699 RYPKLLEGLKGKKVIDVAAGSTHCLAL 725



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 161/352 (45%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3008 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSNYVVKKVAVHSGGRHAMAL 3066

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3067 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3114

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3115 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3174

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3175 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3231

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +             
Sbjct: 3232 TWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTG----------- 3280

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3281 -QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3331



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 121/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+VF WG G G  L  G  + V +       AL  K     VV 
Sbjct: 499 IAAHSDGHHYLALSANGEVFSWGCGDGGRL--GHGDTVPLEEPKMISALSGKQAGKHVV- 555

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  V+C 
Sbjct: 556 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 612

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L I  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQF 669

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++T+G G    LGHG       P+ +E LK  K +  + G  H  A+ E
Sbjct: 670 SIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE 727



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 108/229 (47%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 3003

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +    +    KVA   G    
Sbjct: 3004 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHA 3063

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            +ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3064 MALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 3123

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3124 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3172



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3956 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4011

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4012 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4060

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +F+
Sbjct: 4061 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFT 4119

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    +R I DIACGS       ++    V++WG G 
Sbjct: 4120 WGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI-DIACGSGDAQTLCLTDDDTVWSWGDGD 4178

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4217



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 111/222 (50%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 4003

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 4004 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A +++  +++TWGKG
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTWGKG 4123

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4124 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4165



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDIVKVRCGSQFSIALT 674

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ+++WG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 675 KDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 735 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 779



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 23/182 (12%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           G+++ WG G    LG+G           SS D+   +L   L+   V+D   ++CGS  A
Sbjct: 571 GELYTWGRGNYGRLGHG-----------SSEDQTIPMLVTGLKGLKVID---VSCGSGDA 616

Query: 309 --VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
             + VT+ GQ++SWG+G  GKLG G       PKLI+ L   +I  V CG   + A+T  
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKD 676

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
           G +YTWG G +    LG  +E     P+ + G ++G ++  +  G  H  A+T   ++ +
Sbjct: 677 GQVYTWGKGDNQ--RLGHGTEEHVRYPKLLEG-LKGKKVIDVAAGSTHCLALTEDSEVHS 733

Query: 427 FG 428
           +G
Sbjct: 734 WG 735


>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
          Length = 4839

 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2965 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3014

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3074

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AAITS+G+L+T+G G 
Sbjct: 3075 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3132 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3180

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3181 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3240

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3241 LGHGTDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTT 3299

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3300 VNRKPTLVQGLEGQKITRVACGSSHSVA 3327



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 126/391 (32%), Positives = 194/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3955 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 4004

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4005 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGE 4064

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  I  G  H+A IT+AG LFT+G
Sbjct: 4065 VYSWGEA--EDGKLGHGNRSPCDRPRVIES-LRGIEVVDIAAGGAHSACITAAGDLFTWG 4121

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGHGD      P+ VE L+  + +  +CG          +G            +
Sbjct: 4122 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG----------SGDAQTLCLTDDDTV 4171

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4172 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4231

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4232 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4289

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K++  V CGS  T A
Sbjct: 4290 TTNAIQRPRLVAALQGKKINRVACGSAHTLA 4320



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/340 (32%), Positives = 169/340 (49%), Gaps = 36/340 (10%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2960 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3019

Query: 372  WGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
             G+  +    LG          Q++ +S+++ +KV+          +  G  H  A+T  
Sbjct: 3020 CGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVA----------VHSGGRHAMALTVD 3069

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            GK+F++G+G  G LGH  R +   PR +E LK  +    +CG  H+AAI           
Sbjct: 3070 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT---------- 3119

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
              SS +L+TWG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G 
Sbjct: 3120 --SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3177

Query: 540  VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            VFS G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG
Sbjct: 3178 VFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3236

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               +LGHG + + + P +VE LR K++  V  G+    A+
Sbjct: 3237 DYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3276



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 175/355 (49%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    +AC  K  +++++ G++++              +D   P+L+ +L 
Sbjct: 443 PIQCEGLANLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDTLGPQLVQSLA 492

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A++ +G++++WG G  + G LG    +    P+ +S   G+  
Sbjct: 493 SRNIVKIAAHSDGHHYLALSANGEVFSWGCG--DGGRLGHGDTVPLEEPKMISALSGKQA 550

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  S
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 610

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 611 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV++ G  D  +LG       ++P  +EG +K + + D+A 
Sbjct: 659 DIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEG-LKGKKVIDVAA 717

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACG 770



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 166/327 (50%), Gaps = 30/327 (9%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++ +WG      +G    A+VS P   + L    +  VAC E     ++ +G +YT    
Sbjct: 425 EVIAWG-----LIGWKYYANVSGPIQCEGLANLGVMQVACAEKRFLILSRNGRVYTQAYN 479

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
              LG     S  S  I  K++   +G           H  A+++ G++F++G G  G L
Sbjct: 480 SDTLGPQLVQSLASRNI-VKIAAHSDG----------HHYLALSANGEVFSWGCGDGGRL 528

Query: 436 GHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWGDG 494
           GHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG G
Sbjct: 529 GHGD----TVP-----LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG 579

Query: 495 AEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQLG 552
             G+LGHG +E + +P+ V     +    V+CG   + T+A+T  GQV+S G  DYG+LG
Sbjct: 580 NYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLG 639

Query: 553 SPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
             GS G K P  IE  ++   I  + CGS     ++   +VYTWGKG N +LGHG  E+ 
Sbjct: 640 RGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHV 698

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + P L+E L+ K+V  V  GS    A+
Sbjct: 699 RYPKLLEGLKGKKVIDVAAGSTHCLAL 725



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 149/320 (46%), Gaps = 42/320 (13%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G+V+ WGE   +G LG        S  DR     P+V+ES   ++   IA G  H+  +T
Sbjct: 4063 GEVYSWGEA-EDGKLGHGNR----SPCDR-----PRVIESLRGIEVVDIAAGGAHSACIT 4112

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLY 370
              G +F+WG+G  G+LGHG   D   PKL++AL G  +  +AC  G+  T  +T    ++
Sbjct: 4113 AAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTDDDTVW 4172

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+       +P K+   + GL +  + CG   + A+T +G ++T+G G
Sbjct: 4173 SWGDG--DYGKLGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4229

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +  LGHG       PR+V+ L+  K +  + G  H     E              +++T
Sbjct: 4230 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4277

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGD  EGQLG G       P  V         +VACG + T+A + +             
Sbjct: 4278 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 4324

Query: 551  LGSPGSTGKFPTRIEGNIKH 570
               P + GK PT++     H
Sbjct: 4325 --KPANAGKLPTQVPMEYNH 4342



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 161/352 (45%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3008 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSNYVVKKVAVHSGGRHAMAL 3066

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3067 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3114

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3115 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3174

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3175 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3231

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +             
Sbjct: 3232 TWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTG----------- 3280

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3281 -QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3331



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 121/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+VF WG G G  L  G  + V +       AL  K     VV 
Sbjct: 499 IAAHSDGHHYLALSANGEVFSWGCGDGGRL--GHGDTVPLEEPKMISALSGKQAGKHVV- 555

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  V+C 
Sbjct: 556 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 612

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L I  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQF 669

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++T+G G    LGHG       P+ +E LK  K +  + G  H  A+ E
Sbjct: 670 SIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTE 727



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 108/229 (47%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2957 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 3003

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +    +    KVA   G    
Sbjct: 3004 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHA 3063

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            +ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3064 MALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 3123

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3124 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3172



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 133/280 (47%), Gaps = 25/280 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3956 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4011

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
            +  G G  G LG G   S S P  +E+++ +              I +VA  + G + L+
Sbjct: 4012 YATGYGAGGRLGIGGTESVSTPTLLESIQHV-------------FIKKVAVNSGGKHCLA 4058

Query: 485  ---SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
                 ++++WG+  +G+LGHG+  P   P  ++    I    +A G + +  +TA G +F
Sbjct: 4059 LSFEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLF 4118

Query: 542  SMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKG 598
            + G   YG+LG   S  +  P  +E    +R I DIACGS       ++    V++WG G
Sbjct: 4119 TWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI-DIACGSGDAQTLCLTDDDTVWSWGDG 4177

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
              G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4178 DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4217



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDIVKVRCGSQFSIALT 674

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ+++WG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 675 KDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     I+   P  + G ++   I  I CGP  + A +S
Sbjct: 735 GSNDQCQHFDTL----RITKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 779



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 4003

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL+  G
Sbjct: 4004 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEG 4063

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + DIA G  H A +++  +++TWGKG
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTWGKG 4123

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4124 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4165



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 23/182 (12%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           G+++ WG G    LG+G           SS D+   +L   L+   V+D   ++CGS  A
Sbjct: 571 GELYTWGRGNYGRLGHG-----------SSEDQTIPMLVTGLKGLKVID---VSCGSGDA 616

Query: 309 --VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
             + VT+ GQ++SWG+G  GKLG G       PKLI+ L   +I  V CG   + A+T  
Sbjct: 617 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKD 676

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
           G +YTWG G +    LG  +E     P+ + G ++G ++  +  G  H  A+T   ++ +
Sbjct: 677 GQVYTWGKGDNQ--RLGHGTEEHVRYPKLLEG-LKGKKVIDVAAGSTHCLALTEDSEVHS 733

Query: 427 FG 428
           +G
Sbjct: 734 WG 735


>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Callithrix jacchus]
          Length = 4774

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2901 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2950

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 2951 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFS 3010

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3011 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3067

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3068 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3116

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   VP  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3117 WGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3176

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3177 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3235

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3236 VNRKPTLVQGLEGQKITRVACGSSHSVA 3263



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3890 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 3939

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 3940 VTADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 3999

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  S      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4000 VYSWGEA--EDGKLGHGSRSPCDRPRVIE-SLRGVEVVDVAAGGAHSACVTAAGDLYTWG 4056

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 4057 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG----------SGDAQTLCLTDDDTV 4106

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4107 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4166

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4167 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4224

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4225 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4255



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 168/332 (50%), Gaps = 20/332 (6%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2896 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 2955

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC--GPWHTAAITSAGKLFTFGD 429
             G+  +    LG +S  +  IPR+++  +    +  +    G  H  A+T  GK+F++G+
Sbjct: 2956 CGEATNGRLGLG-ISSGTVPIPRQITA-LSSYMVKKVAVHSGGRHATALTVDGKVFSWGE 3013

Query: 430  GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
            G  G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+
Sbjct: 3014 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELY 3061

Query: 490  TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSAD 547
            TWG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D
Sbjct: 3062 TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 3121

Query: 548  YGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            +G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG
Sbjct: 3122 FGKLGRGGSEGCNVPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHG 3180

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             + + + P +VE LR K++  V  G+    A+
Sbjct: 3181 SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3212



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 167/355 (47%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G +++              +D   P+L+  L 
Sbjct: 373 PIQCEGLANLGVTQIACAEKRFLILSRNGCVYT----------QAYNSDTLAPQLVQGLA 422

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 423 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 480

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +  L HG  +   +   +  L   K +  S
Sbjct: 481 GKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKS 540

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG+    T A  E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 541 CGIRFAQTLAFYE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 588

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 589 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 647

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 648 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 700



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 162/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 2944 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYMVKKVAVHSGGRHATAL 3002

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3003 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3050

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3051 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3110

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       +P+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3111 EGLVFSWGDG--DFGKLGRGGSEGCNVPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3167

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 3168 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3215

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 3216 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3265



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 151/329 (45%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 400 NGCVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 459

Query: 330 HGVEADVSYPKLIDALN----GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +    G ++  +ACG  ++ A+T  G+LYTWG G  N   L   
Sbjct: 460 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYXRLDHG 517

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
               + I   +SG ++  +     CG     T A    G+++++GDG +G LG G     
Sbjct: 518 RSAMNEILIMISG-LDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGC 576

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 577 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 624

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 625 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 684

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 685 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 712



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 154/329 (46%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 355 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGCVYT---- 405

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
                   Q        P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 406 --------QAYNSDTLAPQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 456

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 457 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 507

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G   +L HG +    + + +   D   F   +CG   + T+A    GQV+S G  DYG+
Sbjct: 508 RGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGK 567

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 568 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 626

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 627 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 655



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 123/280 (43%), Gaps = 30/280 (10%)

Query: 376  IHNLGLLGQV---SEISHWIPRKVSGQME--------GLQISSICCGPWHTAAITSAGKL 424
            IH L LLG++    E    +P   S   E        G  I     G   TA I +  K+
Sbjct: 2844 IHGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGSSGSLIRKKAAGLESTATIRT--KV 2901

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
            F +G      LG    S   VP   ETL  L              +V+VAG +     ++
Sbjct: 2902 FVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAGGSKSLFAVT 2948

Query: 485  SK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSITIALTATGQV 540
             + K++  G+   G+LG G +   V +P  +         KVA   G     ALT  G+V
Sbjct: 2949 VEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKV 3008

Query: 541  FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
            FS G  D G+LG          R+   +K + I DIACGS H A ++S  E+YTWG G  
Sbjct: 3009 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3068

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3069 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3108



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 131/279 (46%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3891 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 3946

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 3947 YATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 3995

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG   P   P  ++    +    VA G + +  +TA G +++
Sbjct: 3996 -SEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYT 4054

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + DIACGS       ++    V++WG G 
Sbjct: 4055 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDAQTLCLTDDDTVWSWGDGD 4113

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4114 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4152



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 555 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 604

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 605 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 664

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 665 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 709



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  +          P+ +E         I CG++ ++ +T
Sbjct: 3112 GLVFSWGDGDFGKLGRGGSEGCNV----------PQNIERLNGQGVCQIECGAQFSLALT 3161

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT SG +Y W
Sbjct: 3162 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3221

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+ 
Sbjct: 3222 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3267



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3891 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 3938

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3939 AVTADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3998

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 3999 EVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTWGKG 4058

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4059 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4100



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/180 (29%), Positives = 89/180 (49%), Gaps = 19/180 (10%)

Query: 253 GDVFIWGEGLGNGLLGG--AVNGV--EISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           G+++ WG G    L  G  A+N +   IS  DR+      + +S  +  AQ++A      
Sbjct: 501 GELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKF----IYKSCGIRFAQTLA------ 550

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
               + GQ++SWG+G  GKLG G       PKLI+ L   ++  V CG   + A+T  G 
Sbjct: 551 --FYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQ 608

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +Y+WG G +    LG  +E     P+ + G ++G ++  +  G  H  A+T   ++ ++G
Sbjct: 609 VYSWGKGDNQ--RLGHGTEEHVRYPKLLEG-LQGKKVIDVAAGSTHCLALTEDSEVHSWG 665



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 4/115 (3%)

Query: 532 IALTATGQVFSMGSADYGQLGS----PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
           +AL ATG+V+S G  D G+LG     P    K  +   G    +++  IACGS + A ++
Sbjct: 439 LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT 498

Query: 588 SKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHK 642
           ++ E+YTWG+G   +L HG +   +   ++  L  ++     CG  F   +  ++
Sbjct: 499 AEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIRFAQTLAFYE 553


>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
          Length = 4836

 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2962 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G+++S GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3072 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGT-----------RDAQTLALTDEGLVFS 3177

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3178 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3237

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3238 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3296

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3297 VNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3952 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 4001

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4002 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4061

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4062 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4118

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + +  +CG          +G            +
Sbjct: 4119 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG----------SGDAQTLCLTDDDTV 4168

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4169 WSWGDGDYGKLGRGGSDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4228

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4229 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4286

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4287 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 188/394 (47%), Gaps = 42/394 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    +AC  K  +++++ G++++              +D+  P+L+  L 
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLAPQLVQGLA 492

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 611 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEG-LQGKKVIDVAA 717

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG--SNF 634
           GS H   ++  SEV++W  G+N Q  H D     K  PT +  L  K +  + CG   +F
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSF 775

Query: 635 TAAICLHKGVSIADH---SICSGCRNQFNFRRRR 665
             + C    + +       ICS    Q +   R+
Sbjct: 776 AWSSCSEWSIGLRVPFVVDICSMTFEQLDLLLRQ 809



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 169/340 (49%), Gaps = 36/340 (10%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y+
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 3016

Query: 372  WGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
             G+  +    LG          Q++ +S ++ +KV+          +  G  H  A+T  
Sbjct: 3017 CGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVA----------VHSGGRHATALTVD 3066

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            GK+F++G+G  G LGH  R +   PR +E LK  +    +CG  H+AA+           
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT---------- 3116

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
              SS +L+TWG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G 
Sbjct: 3117 --SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGL 3174

Query: 540  VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            VFS G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               +LGHG + + + P +VE LR K++  V  G+    A+
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 163/352 (46%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y+  E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3005 LFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3064 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3111

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3112 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTD 3171

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3172 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3276

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3277 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3328



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 162/329 (49%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  VAC E     ++ +G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQA-- 477

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
            +N  +L          P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 478 -YNSDMLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 527 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 578 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LG G  E
Sbjct: 638 LGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEE 696

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 119/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 555

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 556 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 612

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQF 669

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LG G       P+ +E L+  K +  + G  H  A+ E
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3953 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4008

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4009 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4057

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4058 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4116

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR I DIACGS       ++    V++WG G 
Sbjct: 4117 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI-DIACGSGDAQTLCLTDDDTVWSWGDGD 4175

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4176 YGKLGRGGSDGSKVPMKIDSLTGLGVVKVECGSQFSVAL 4214



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 108/230 (46%), Gaps = 19/230 (8%)

Query: 415  TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            TA I +  K+F +G      LG    S   VP   ETL  L              +V+VA
Sbjct: 2955 TATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVA 2999

Query: 475  GKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSI 530
            G +     ++ + K+++ G+   G+LG G +   V +P  +         KVA   G   
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 531  TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
              ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 3119

Query: 591  EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            E+YTWG G  G+LGHGDN  +  P +V+ L   +V  V CG+     + L
Sbjct: 3120 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLAL 3169



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 4000

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 4001 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4162



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 85/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVIKVRCGSQFSIALT 674

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LG G E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 675 KDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 735 GSNDQCQHFDTL----RVTKPEPTALPG-LDSKHIVGIACGPAQSFAWSS 779


>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
 gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
          Length = 444

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 118/355 (33%), Positives = 186/355 (52%), Gaps = 30/355 (8%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK-QGQIFSWGEGSGGKLGHGVE 333
           ++   D  D   P  L +   LD  SI CG+ H    ++ + +++SWG G  G+LGHG  
Sbjct: 49  QLGHGDAEDRPTPTQLSTLDGLDIISITCGADHTTSYSESRMEVYSWGWGDFGRLGHGNS 108

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +D+  P+ I AL+   I  +ACG+ H  AVT+ G++ +WG   +  G LG  +     +P
Sbjct: 109 SDLFTPQPIKALHSLKIRQIACGDSHCLAVTMDGEVQSWGR--NQNGQLGLGTTEDSLVP 166

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           +K+    +G+ I  +  G  HTAA+T  G+L+ +G G +G LG GDR+   VP +V  + 
Sbjct: 167 QKIQ-AFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSLVN 225

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
             K +M +CG  HT ++             SS  L+T+G    GQLGHGD E  + P  V
Sbjct: 226 GDKMIMVACGWRHTISVS------------SSGGLYTYGWSKYGQLGHGDFEDHLTPHKV 273

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG--------SPGSTGKFPTRIE 565
           +   D     ++ G   T+ALT+ G ++  G   +GQ+G        SP    KFP    
Sbjct: 274 EALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQV-KFPHEQ- 331

Query: 566 GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
               H  ++ I+CG  H   ++ +  V++WG+G NGQLGHG++ ++  P ++E L
Sbjct: 332 ---AHSLVQ-ISCGWRHTLAITERQNVFSWGRGTNGQLGHGESMDRNLPKIIEVL 382



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 142/290 (48%), Gaps = 20/290 (6%)

Query: 352 MVACGEFHTCAVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC 410
           +++ G  H+ A+ LSG++  +WG G    G LG         P ++S  ++GL I SI C
Sbjct: 22  LISAGASHSVAL-LSGNIVCSWGRG--EDGQLGHGDAEDRPTPTQLS-TLDGLDIISITC 77

Query: 411 GPWHTAAIT-SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA 469
           G  HT + + S  +++++G G FG LGHG+ S    P+ ++ L  LK    +CG  H  A
Sbjct: 78  GADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHSLKIRQIACGDSHCLA 137

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHS 529
           +                ++ +WG    GQLG G  E  +VP  ++    +S   VA G  
Sbjct: 138 VT------------MDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAE 185

Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSS 588
            T A+T  G+++  G   YG LG      +  P ++      + I  +ACG  H   VSS
Sbjct: 186 HTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDKMIM-VACGWRHTISVSS 244

Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
              +YT+G    GQLGHGD E+  TP  VEALRD  +  +  G   T A+
Sbjct: 245 SGGLYTYGWSKYGQLGHGDFEDHLTPHKVEALRDSYISMISGGWRHTMAL 294



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 90/184 (48%), Gaps = 13/184 (7%)

Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
           + ++ S G  H+ A+            LS   + +WG G +GQLGHGDAE R  P  +  
Sbjct: 19  QVILISAGASHSVAL------------LSGNIVCSWGRGEDGQLGHGDAEDRPTPTQLST 66

Query: 516 SDDISFCKVACGHSITIALTAT-GQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIE 574
            D +    + CG   T + + +  +V+S G  D+G+LG   S+  F  +    +    I 
Sbjct: 67  LDGLDIISITCGADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHSLKIR 126

Query: 575 DIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNF 634
            IACG  H   V+   EV +WG+  NGQLG G  E+   P  ++A +   +K V  G+  
Sbjct: 127 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEH 186

Query: 635 TAAI 638
           TAA+
Sbjct: 187 TAAV 190



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 2/55 (3%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL--NGSNIHMV 353
           I+CG +H + +T++  +FSWG G+ G+LGHG   D + PK+I+ L  +GS  H +
Sbjct: 338 ISCGWRHTLAITERQNVFSWGRGTNGQLGHGESMDRNLPKIIEVLSADGSGGHQI 392


>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
            scrofa]
          Length = 4060

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2186 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2235

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 2236 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2295

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 2296 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2352

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 2353 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 2401

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 2402 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 2461

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 2462 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTT 2520

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 2521 VNRKPTLVQGLEGQKITRVACGSSHSVA 2548



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2181 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 2240

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
             G+  +    LG +S  +  IPR+++     + +  ++  G  H  A+T  GK+F++G+G
Sbjct: 2241 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2299

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 2300 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 2347

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
            WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 2348 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2407

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 2408 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 2466

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 2467 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 2497



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 193/391 (49%), Gaps = 30/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3177 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALAALRPVQLIGGEQTLFA 3226

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 3227 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 3286

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 3287 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 3343

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ V+ L+  + V  +CG          +G            +
Sbjct: 3344 KGRYGRLGHSDSEDQLKPKLVDALQGHRVVDVACG----------SGDAQTLCLTDDDTV 3393

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 3394 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 3453

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H  V  ++   YTWG    GQLG G
Sbjct: 3454 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLH-CVCCTEDGSYTWGDNDEGQLGDG 3510

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 3511 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3541



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 161/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 2229 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 2287

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 2288 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 2335

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 2336 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 2395

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 2396 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 2452

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +             
Sbjct: 2453 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAG----------- 2501

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 2502 -QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 2550



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2178 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 2224

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 2225 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 2284

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 2285 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 2344

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 2345 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 2393



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 131/278 (47%), Gaps = 21/278 (7%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3178 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LAALRPVQLIGGEQTLFAVTADGKL 3233

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 3234 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 3282

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 3283 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 3341

Query: 543  MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGAN 600
             G   YG+LG   S  +   ++   ++   + D+ACGS       ++    V++WG G  
Sbjct: 3342 WGKGRYGRLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDY 3401

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 3402 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3439



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  I          P+ +E         I CG++ ++ +T
Sbjct: 2397 GLVFSWGDGDFGKLGRGGSEGCNI----------PQNIERLNGQGVCQIECGAQFSLALT 2446

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT +G +Y W
Sbjct: 2447 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 2506

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+ 
Sbjct: 2507 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 2552



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3178 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQL------------IGGEQTLF 3225

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3226 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3285

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 3286 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3345

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LV+AL+  +V  V CGS     +CL
Sbjct: 3346 RYGRLGHSDSEDQLKPKLVDALQGHRVVDVACGSGDAQTLCL 3387


>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
          Length = 580

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/355 (34%), Positives = 181/355 (50%), Gaps = 33/355 (9%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           +ACG  H V VT+ G++ SWG G+ G+LG G   D + P ++ AL+   +  VACG +HT
Sbjct: 75  VACGGHHTVAVTEDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHT 134

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
             VT  G +  WG G  N G LGQ    S  +PR VS  +   +I  I CG  HT A++ 
Sbjct: 135 AVVTDVGLVMCWGKG--NSGQLGQGDWTSSLLPRTVS-TLYNEKIRQIACGMAHTLALSV 191

Query: 421 AGKLFTFGDGTFGALGHG----DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
            G+++++G G  G LG G    + +  + P++V   +E K    +CG  H  AI +    
Sbjct: 192 NGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKFEFIACGSRHCMAITD---- 247

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS-DDISFCKVACGHSITIALT 535
                     +LF+WG GA+G+LG GD+E R  P  V+ S +++  C VA G   T  L+
Sbjct: 248 --------DCRLFSWGLGADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLS 299

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH------------RYIEDIACGSYHI 583
             G++F+ G   YGQLG   +  +   +    ++H            + I   ACG  H 
Sbjct: 300 DNGEIFTCGRGSYGQLGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHT 359

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            V+S+  EV+ WG   +GQLG G  E   +P  + +LR   V  V CG   +AA+
Sbjct: 360 LVISTAGEVFAWGAAEDGQLGTGGTEGANSPVELTSLRG-LVGDVSCGLVHSAAV 413



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 171/349 (48%), Gaps = 39/349 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+V  WG G          N  ++ S +  D  +P V+++        +ACG  H  +VT
Sbjct: 89  GEVVSWGWG----------NEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVT 138

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +  WG+G+ G+LG G       P+ +  L    I  +ACG  HT A++++G++Y+W
Sbjct: 139 DVGLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLALSVNGEIYSW 198

Query: 373 GDGIHNLGLLGQVSEISHWI--PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           G G      +G+  E +  +  P+KV    E  +   I CG  H  AIT   +LF++G G
Sbjct: 199 GAGADGQLGVGKHQEETADVATPQKVRVDEE-EKFEFIACGSRHCMAITDDCRLFSWGLG 257

Query: 431 TFGALGHGDRSSTSVPREV-ETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
             G LG GD  S   P  V  +++ L+    + G  HTA + +        NG    ++F
Sbjct: 258 ADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLSD--------NG----EIF 305

Query: 490 TWGDGAEGQLGHGDAEPRV------------VPLCVKVSDDISFCKVACGHSITIALTAT 537
           T G G+ GQLGHGDA+P++            + L +    D    K ACG + T+ ++  
Sbjct: 306 TCGRGSYGQLGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVISTA 365

Query: 538 GQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
           G+VF+ G+A+ GQLG+ G+ G   + +E       + D++CG  H A V
Sbjct: 366 GEVFAWGAAEDGQLGTGGTEGA-NSPVELTSLRGLVGDVSCGLVHSAAV 413



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 102/230 (44%), Gaps = 31/230 (13%)

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKT---------------VMASCGVWHTAAIVE 472
           G G FG LGHGD  S   P+ +   K                   +  +CG  HT A+ E
Sbjct: 28  GWGEFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGAIYVACGGHHTVAVTE 87

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
                         ++ +WG G EGQLG G+A  + VP  VK   +   C VACG+  T 
Sbjct: 88  ------------DGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTA 135

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
            +T  G V   G  + GQLG    T     R    + +  I  IACG  H   +S   E+
Sbjct: 136 VVTDVGLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLALSVNGEI 195

Query: 593 YTWGKGANGQLGHGDNENKQ----TPTLVEALRDKQVKSVVCGSNFTAAI 638
           Y+WG GA+GQLG G ++ +     TP  V    +++ + + CGS    AI
Sbjct: 196 YSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKFEFIACGSRHCMAI 245



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 86/174 (49%), Gaps = 19/174 (10%)

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDA----EPRVVPLCVKVSDDISFCK-----------VA 525
           +G     L  WG+   G+LGHGD     EP+ +    +    +SF             VA
Sbjct: 19  DGGKRTSLQGWGE--FGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGAIYVA 76

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIA 584
           CG   T+A+T  G+V S G  + GQLGS  +  +  P  ++    HR +  +ACG YH A
Sbjct: 77  CGGHHTVAVTEDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHR-VCGVACGYYHTA 135

Query: 585 VVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           VV+    V  WGKG +GQLG GD  +   P  V  L +++++ + CG   T A+
Sbjct: 136 VVTDVGLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLAL 189


>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pan troglodytes]
          Length = 4776

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2954 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3003

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3004 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3063

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3064 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3120

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3121 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3169

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3170 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3229

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3230 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3288

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3289 VNRKPTLVQGLEGQKITRVACGSSHSVA 3316



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2949 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3008

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
             G+  +    LG +S  +  IPR+++     + +  ++  G  H  A+T  GK+F++G+G
Sbjct: 3009 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3067

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 3068 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 3115

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
            WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 3116 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3175

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 3176 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3234

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 3235 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3265



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 173/355 (48%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 610 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 716

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 155/306 (50%), Gaps = 19/306 (6%)

Query: 336  VSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
            VS P L++++    I  VA   G  H  A++  G++Y+WG+     G LG  +      P
Sbjct: 3967 VSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEA--EDGKLGHGNRSPCDRP 4024

Query: 394  RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
            R +   + G+++  +  G  H+A +T+AG L+T+G G +G LGH D      P+ VE L+
Sbjct: 4025 RVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQ 4083

Query: 454  ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
              + V  +CG          +G            +++WGDG  G+LG G ++   VP+ +
Sbjct: 4084 GHRVVDIACG----------SGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKI 4133

Query: 514  KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHR 571
                 +   KV CG   ++ALT +G V++ G  DY +LG  GS    + P +++G ++ +
Sbjct: 4134 DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQG-LQGK 4191

Query: 572  YIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
             +  IA GS H    +   EVYTWG    GQLG G     Q P LV AL+ K+V  V CG
Sbjct: 4192 KVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACG 4251

Query: 632  SNFTAA 637
            S  T A
Sbjct: 4252 SAHTLA 4257



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 469 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 528

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 529 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 586

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 587 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 693

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 753

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 754 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 781



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/300 (30%), Positives = 146/300 (48%), Gaps = 19/300 (6%)

Query: 287  PKVLEST--VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
            P +LES   V +   ++  G KH + ++ +G+++SWGE   GKLGHG  +    P++I++
Sbjct: 3970 PTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIES 4029

Query: 345  LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
            L G  +  VA G  H+  VT +GDLYTWG G +  G LG         P+ V   ++G +
Sbjct: 4030 LRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 4086

Query: 405  ISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
            +  I CG     T  +T    ++++GDG +G LG G      VP ++++L  L  V   C
Sbjct: 4087 VVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVEC 4146

Query: 463  GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
            G   + A+ +            S  ++TWG G   +LGHG  +    P  V+        
Sbjct: 4147 GSQFSVALTK------------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4194

Query: 523  KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
             +A G    +  T  G+V++ G  D GQLG   +      R+   ++ + +  +ACGS H
Sbjct: 4195 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAH 4254



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 162/352 (46%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 2997 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3055

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3056 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3103

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3104 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3163

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3164 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3220

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 3221 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3268

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3269 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3320



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
              L             P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 479 SDTLA------------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 526 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 577 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 637 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 695

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 554

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 555 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 668

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2946 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 2992

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 2993 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3052

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3053 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3112

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3113 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3161



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 734 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 778



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 91/175 (52%), Gaps = 7/175 (4%)

Query: 470  IVEVAGKTSGSNGL---SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
            I +VA  + G + L   S  ++++WG+  +G+LGHG+  P   P  ++    I    VA 
Sbjct: 3981 IKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA 4040

Query: 527  GHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHI 583
            G + +  +TA G +++ G   YG+LG   S  +  P  +E    HR + DIACGS     
Sbjct: 4041 GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDAQT 4099

Query: 584  AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
              ++    V++WG G  G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4100 LCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4154



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 67/109 (61%)

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            +AL++ G+V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  +
Sbjct: 3994 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGD 4053

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWGKG  G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4054 LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4102



 Score = 62.8 bits (151), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 10/110 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G V+ WG+G  + L  G+ + V      RR    P+ ++        +IA GS H V  T
Sbjct: 4158 GAVYTWGKGDYHRLGHGSDDHV------RR----PRQVQGLQGKKVIAIATGSLHCVCCT 4207

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCA 362
            + G++++WG+   G+LG G    +  P+L+ AL G  ++ VACG  HT A
Sbjct: 4208 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4257


>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 3660

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 125/388 (32%), Positives = 206/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+A  +A GSK    VT +
Sbjct: 1796 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNAVQVAGGSKSLFAVTVE 1845

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG GV +  V  P+ + AL+   +  VA   G  H  A+T  G +++
Sbjct: 1846 GKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFS 1905

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S  +   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 1906 WGEG--DDGKLGHFSRXNCDKPRLIEA-LKSRRIRDIACGSSHSAALTSSGELYTWGLGE 1962

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + V  +CG            + + +  L+ + L F+
Sbjct: 1963 YGRLGHGDNTTQLKPKMVKVLVGHRVVQVACG-----------SRDAQTLALTDEGLVFS 2011

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   VP  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 2012 WGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 2071

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 2072 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTT 2130

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 2131 VNRKPTLVQGLEGQKITRVACGSSHSVA 2158



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 127/391 (32%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G V+ WG     G LGG V G ++         +P   E+   L    +  G +    
Sbjct: 2786 GSGTVYGWGHN-HRGQLGG-VEGAKVK--------VPTPCEALAALRPAQLIGGEQTLFA 2835

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 2836 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 2895

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 2896 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGGLYTWG 2952

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG      +      T          +
Sbjct: 2953 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTEDDT----------V 3002

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ V     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 3003 WSWGDGDYGKLGRGGSDGCKVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDY 3062

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 3063 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 3120

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 3121 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3151



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N   VA G     AVT+ G +Y 
Sbjct: 1791 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNAVQVAGGSKSLFAVTVEGKVYA 1850

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
             G+  +    LG VS  +  +PR+V+     + +  ++  G  H  A+T+ GK+F++G+G
Sbjct: 1851 CGEATNGRLGLG-VSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEG 1909

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 1910 DDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALT------------SSGELYT 1957

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
            WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 1958 WGLGEYGRLGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDF 2017

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 2018 GKLGRGGSEGCNVPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 2076

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 2077 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 2107



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 161/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 1839 LFAVTVEGKVYACGEATNGRLGLGVSSGTVPV-PRQVTALSSYVVKKVAVHSGGRHATAL 1897

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 1898 TADG--KVFSWGEG-DDGKLG---------HFSRXNCDKPRLIEALKSRRIRDIACGSSH 1945

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 1946 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTD 2005

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       +P+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 2006 EGLVFSWGDG--DFGKLGRGGSEGCNVPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 2062

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +             
Sbjct: 2063 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAG----------- 2111

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 2112 -QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 2160



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 97/279 (34%), Positives = 122/279 (43%), Gaps = 28/279 (10%)

Query: 376  IHNLGLLGQV-SEISHW--IPRKVSGQME--------GLQISSICCGPWHTAAITSAGKL 424
            IH L LLG+V +E   W  +P   S   E        G  I     G    A I +  K+
Sbjct: 1739 IHGLVLLGRVRAEDEDWAAVPFLASDNEEEEDEKASGGSLIRKKAAGLESAATIRT--KV 1796

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
            F +G      LG    S   VP   ETL  L  V  + G     A V V GK        
Sbjct: 1797 FVWGLNDKDQLGGLKGSKIKVPSFSETLSALNAVQVAGGSKSLFA-VTVEGK-------- 1847

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSITIALTATGQVF 541
               ++  G+   G+LG G +   V VP  V         KVA   G     ALTA G+VF
Sbjct: 1848 ---VYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVF 1904

Query: 542  SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
            S G  D G+LG          R+   +K R I DIACGS H A ++S  E+YTWG G  G
Sbjct: 1905 SWGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWGLGEYG 1964

Query: 602  QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 1965 RLGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQTLAL 2003



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG V      +P      +  L+ + +  G     A+T+ GKL
Sbjct: 2787 SGTVYGWG---HNHRGQLGGVEGAKVKVPTPCEA-LAALRPAQLIGGEQTLFAVTADGKL 2842

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 2843 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 2891

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 2892 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYT 2950

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + D+ACGS       ++    V++WG G 
Sbjct: 2951 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DVACGSGDAQTLCLTEDDTVWSWGDGD 3009

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  V+AL       V CGS F+ A+
Sbjct: 3010 YGKLGRGGSDGCKVPMKVDALTGLGAVKVECGSQFSVAL 3048



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 13/168 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  +          P+ +E         I CG++ ++ +T
Sbjct: 2007 GLVFSWGDGDFGKLGRGGSEGCNV----------PQNIERLNGQGVCQIECGAQFSLALT 2056

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT +G +Y W
Sbjct: 2057 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 2116

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+
Sbjct: 2117 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 2161



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+                + G+ +  
Sbjct: 2787 SGTVYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQL------------IGGEQTLF 2834

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 2835 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 2894

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++   +YTWGKG
Sbjct: 2895 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKG 2954

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  V CGS     +CL
Sbjct: 2955 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 2996


>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Papio anubis]
          Length = 4123

 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2250 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2299

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 2300 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2359

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 2360 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2416

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 2417 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 2465

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 2466 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 2525

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 2526 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 2584

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 2585 VNRKPTLVQGLEGQKITRVACGSSHSVA 2612



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3239 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 3288

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 3289 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 3348

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 3349 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 3405

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 3406 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG----------SGDAQTLCLTDDDTV 3455

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 3456 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 3515

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 3516 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 3573

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 3574 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3604



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2245 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 2304

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
             G+  +    LG +S  +  IPR+++     + +  ++  G  H  A+T  GK+F++G+G
Sbjct: 2305 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2363

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 2364 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 2411

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
            WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 2412 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2471

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 2472 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 2530

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 2531 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 2561



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 162/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 2293 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 2351

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 2352 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 2399

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 2400 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 2459

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 2460 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 2516

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 2517 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 2564

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 2565 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 2614



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2242 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 2288

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 2289 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 2348

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 2349 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 2408

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 2409 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 2457



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3240 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 3295

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 3296 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 3344

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 3345 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 3403

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + DIACGS       ++    V++WG G 
Sbjct: 3404 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDAQTLCLTDDDTVWSWGDGD 3462

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 3463 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3501



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  I          P+ +E         I CG++ ++ +T
Sbjct: 2461 GLVFSWGDGDFGKLGRGGSEGCNI----------PQNIERLNGQGVCQIECGAQFSLALT 2510

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT SG +Y W
Sbjct: 2511 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 2570

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+ 
Sbjct: 2571 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 2616



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3240 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 3287

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3288 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3347

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 3348 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3407

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 3408 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 3449


>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Cricetulus griseus]
          Length = 4836

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 226/436 (51%), Gaps = 39/436 (8%)

Query: 207  SLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGL 266
            ++ F+AS   ++ + + ST    R   +   S+++  +          VF+WG    + L
Sbjct: 2923 AVPFLASDNEEEEDDKGSTGSLIRKKTAGLESTATIRT---------KVFVWGLNDKDQL 2973

Query: 267  LGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGG 326
              G + G +I         +P   E+   L+   +A GSK    VT +G+++S GE + G
Sbjct: 2974 --GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNG 3023

Query: 327  KLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLG 383
            +LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++WG+G  + G LG
Sbjct: 3024 RLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLG 3081

Query: 384  QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
              S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G +G LGHGD ++ 
Sbjct: 3082 HFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQ 3140

Query: 444  SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FTWGDGAEGQLGHG 502
              P+ V+ L   + +  +CG            + + +  L+ + L F+WGDG  G+LG G
Sbjct: 3141 LKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189

Query: 503  DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFP 561
             +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +LG       + P
Sbjct: 3190 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKP 3249

Query: 562  TRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALR 621
              +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G     + PTLV+ L 
Sbjct: 3250 QVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLE 3308

Query: 622  DKQVKSVVCGSNFTAA 637
             +++  V CGS+ + A
Sbjct: 3309 GQKITRVACGSSHSVA 3324



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3952 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 4001

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4002 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4061

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4062 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4118

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + +  +CG          +G            +
Sbjct: 4119 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG----------SGDAQTLCLTDDDTV 4168

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4169 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4228

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4229 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4286

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4287 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 188/394 (47%), Gaps = 42/394 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    +AC  K  +++++ G++++              +D+  P+L+  L 
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLAPQLVQGLA 492

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 611 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 717

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG--SNF 634
           GS H   ++  SEV++W  G+N Q  H D     K  PT +  L  K +  + CG   +F
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACGPAQSF 775

Query: 635 TAAICLHKGVSIADH---SICSGCRNQFNFRRRR 665
             + C    + +       ICS    Q +   R+
Sbjct: 776 AWSSCXEWSIGLRVPFVVDICSMTFEQLDLLLRQ 809



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 169/340 (49%), Gaps = 36/340 (10%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y+
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 3016

Query: 372  WGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
             G+  +    LG          Q++ +S ++ +KV+          +  G  H  A+T  
Sbjct: 3017 CGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVA----------VHSGGRHATALTVD 3066

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            GK+F++G+G  G LGH  R +   PR +E LK  +    +CG  H+AA+           
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT---------- 3116

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
              SS +L+TWG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G 
Sbjct: 3117 --SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 540  VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            VFS G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               +LGHG + + + P +VE LR K++  V  G+    A+
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 163/352 (46%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y+  E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3005 LFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3064 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3111

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3112 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3172 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3276

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3277 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3328



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 163/329 (49%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  VAC E     ++ +G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQA-- 477

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
            +N  +L          P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 478 -YNSDMLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 527 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 578 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 638 LGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 696

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 555

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 556 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 612

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQF 669

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3953 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4008

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4009 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4057

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4058 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4116

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR I DIACGS       ++    V++WG G 
Sbjct: 4117 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI-DIACGSGDAQTLCLTDDDTVWSWGDGD 4175

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4214



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 124/280 (44%), Gaps = 30/280 (10%)

Query: 376  IHNLGLLGQV---SEISHWIPRKVSGQME--------GLQISSICCGPWHTAAITSAGKL 424
            IH L LLG++    E    +P   S   E        G  I     G   TA I +  K+
Sbjct: 2905 IHGLILLGRIRAEEEDLAAVPFLASDNEEEEDDKGSTGSLIRKKTAGLESTATIRT--KV 2962

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
            F +G      LG    S   VP   ETL  L              +V+VAG +     ++
Sbjct: 2963 FVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAGGSKSLFAVT 3009

Query: 485  SK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSITIALTATGQV 540
             + K+++ G+   G+LG G +   V +P  +         KVA   G     ALT  G+V
Sbjct: 3010 VEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 541  FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
            FS G  D G+LG          R+   +K + I DIACGS H A ++S  E+YTWG G  
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3129

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3130 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVIKVRCGSQFSIALT 674

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 735 GSNDQCQHFDTL----RVTKPEPTALPG-LDTKHIVGIACGPAQSFAWSS 779



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 4000

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 4001 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4162


>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
 gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4836

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2962 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G+++S GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3072 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3177

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3178 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3237

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3238 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3296

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3297 VNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3952 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 4001

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4002 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4061

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4062 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4118

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + +  +CG          +G            +
Sbjct: 4119 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG----------SGDAQTLCLTDDDTV 4168

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4169 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4228

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4229 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4286

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4287 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 175/355 (49%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    +AC  K  +++++ G++++              +D+  P+L+  L 
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLAPQLVQGLA 492

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 611 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 717

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  PT +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACG 770



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 169/340 (49%), Gaps = 36/340 (10%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y+
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 3016

Query: 372  WGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
             G+  +    LG          Q++ +S ++ +KV+          +  G  H  A+T  
Sbjct: 3017 CGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVA----------VHSGGRHATALTVD 3066

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            GK+F++G+G  G LGH  R +   PR +E LK  +    +CG  H+AA+           
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT---------- 3116

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
              SS +L+TWG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G 
Sbjct: 3117 --SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 540  VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            VFS G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               +LGHG + + + P +VE LR K++  V  G+    A+
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 163/352 (46%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y+  E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3005 LFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3064 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3111

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3112 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3172 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3276

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3277 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3328



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 163/329 (49%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  VAC E     ++ +G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQA-- 477

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
            +N  +L          P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 478 -YNSDMLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 527 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 578 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 638 LGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 696

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 555

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 556 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 612

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQF 669

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3953 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4008

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4009 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4057

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4058 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4116

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR I DIACGS       ++    V++WG G 
Sbjct: 4117 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI-DIACGSGDAQTLCLTDDDTVWSWGDGD 4175

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4214



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/230 (33%), Positives = 108/230 (46%), Gaps = 19/230 (8%)

Query: 415  TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            TA I +  K+F +G      LG    S   VP   ETL  L              +V+VA
Sbjct: 2955 TATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVA 2999

Query: 475  GKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSI 530
            G +     ++ + K+++ G+   G+LG G +   V +P  +         KVA   G   
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 531  TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
              ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 3119

Query: 591  EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            E+YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3120 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVIKVRCGSQFSIALT 674

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 735 GSNDQCQHFDTL----RVTKPEPTALPG-LDSKHIVGIACGPAQSFAWSS 779



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 4000

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 4001 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4162


>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
            musculus]
          Length = 4841

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2967 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3016

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G+++S GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3017 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3076

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3077 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3133

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3134 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3182

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3183 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3242

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3243 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3301

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3302 VNRKPTLVQGLEGQKITRVACGSSHSVA 3329



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3957 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 4006

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4007 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4066

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4067 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4123

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + +  +CG          +G            +
Sbjct: 4124 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG----------SGDAQTLCLTDDDTV 4173

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4174 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4233

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4234 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4291

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4292 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4322



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 188/394 (47%), Gaps = 42/394 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    +AC  K  +++++ G++++              +D+  P+L+  L 
Sbjct: 448 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLAPQLVQGLA 497

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 498 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 555

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 556 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 615

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 616 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 663

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 664 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 722

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG--SNF 634
           GS H   ++  SEV++W  G+N Q  H D     K  PT +  L  K +  + CG   +F
Sbjct: 723 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACGPAQSF 780

Query: 635 TAAICLHKGVSIADH---SICSGCRNQFNFRRRR 665
             + C    + +       ICS    Q +   R+
Sbjct: 781 AWSSCSEWSIGLRVPFVVDICSMTFEQLDLLLRQ 814



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 169/340 (49%), Gaps = 36/340 (10%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y+
Sbjct: 2962 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 3021

Query: 372  WGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
             G+  +    LG          Q++ +S ++ +KV+          +  G  H  A+T  
Sbjct: 3022 CGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVA----------VHSGGRHATALTVD 3071

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            GK+F++G+G  G LGH  R +   PR +E LK  +    +CG  H+AA+           
Sbjct: 3072 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT---------- 3121

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
              SS +L+TWG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G 
Sbjct: 3122 --SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3179

Query: 540  VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            VFS G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG
Sbjct: 3180 VFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3238

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               +LGHG + + + P +VE LR K++  V  G+    A+
Sbjct: 3239 DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3278



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 163/352 (46%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y+  E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3010 LFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3068

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3069 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3116

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3117 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3176

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3177 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3233

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 3234 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3281

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3282 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3333



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 163/329 (49%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  VAC E     ++ +G +YT    
Sbjct: 430 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQA-- 482

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
            +N  +L          P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 483 -YNSDMLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 531

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 532 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 582

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 583 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 642

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 643 LGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 701

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 702 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 730



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 504 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 560

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 561 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 617

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 618 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQF 674

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 675 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 732



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3958 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4013

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4014 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4062

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4063 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4121

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR I DIACGS       ++    V++WG G 
Sbjct: 4122 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI-DIACGSGDAQTLCLTDDDTVWSWGDGD 4180

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4181 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4219



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/230 (33%), Positives = 108/230 (46%), Gaps = 19/230 (8%)

Query: 415  TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            TA I +  K+F +G      LG    S   VP   ETL  L              +V+VA
Sbjct: 2960 TATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVA 3004

Query: 475  GKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSI 530
            G +     ++ + K+++ G+   G+LG G +   V +P  +         KVA   G   
Sbjct: 3005 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3064

Query: 531  TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
              ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  
Sbjct: 3065 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 3124

Query: 591  EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            E+YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3125 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3174



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 630 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVIKVRCGSQFSIALT 679

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 680 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 739

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 740 GSNDQCQHFDTL----RVTKPEPTALPG-LDSKHIVGIACGPAQSFAWSS 784



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3958 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 4005

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 4006 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4065

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4066 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4125

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4126 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4167


>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
 gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
            norvegicus]
          Length = 4779

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2905 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2954

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G+++S GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 2955 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3014

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3015 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3071

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3072 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3120

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3121 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3180

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3181 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3239

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3240 VNRKPTLVQGLEGQKITRVACGSSHSVA 3267



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3895 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 3944

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 3945 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4004

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4005 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4061

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + +  +CG          +G            +
Sbjct: 4062 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG----------SGDAQTLCLTDDDTV 4111

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4112 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4171

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4172 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4229

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4230 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4260



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 175/355 (49%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    +AC  K  +++++ G++++              +D+  P+L+  L 
Sbjct: 388 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLAPQLVQGLA 437

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 438 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 495

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 496 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 555

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 556 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 603

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 604 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 662

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  PT +  L  K +  + CG
Sbjct: 663 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACG 715



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 169/340 (49%), Gaps = 36/340 (10%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y+
Sbjct: 2900 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 2959

Query: 372  WGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
             G+  +    LG          Q++ +S ++ +KV+          +  G  H  A+T  
Sbjct: 2960 CGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVA----------VHSGGRHATALTVD 3009

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            GK+F++G+G  G LGH  R +   PR +E LK  +    +CG  H+AA+           
Sbjct: 3010 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT---------- 3059

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
              SS +L+TWG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G 
Sbjct: 3060 --SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3117

Query: 540  VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            VFS G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG
Sbjct: 3118 VFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3176

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               +LGHG + + + P +VE LR K++  V  G+    A+
Sbjct: 3177 DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3216



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 163/352 (46%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y+  E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 2948 LFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3006

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3007 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3054

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3055 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3114

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3115 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3171

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 3172 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3219

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3220 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3271



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 163/329 (49%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  VAC E     ++ +G +YT    
Sbjct: 370 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQA-- 422

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
            +N  +L          P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 423 -YNSDMLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 471

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 472 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 522

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 523 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 582

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 583 LGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 641

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 642 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 670



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 444 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 500

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 501 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 557

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 558 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQF 614

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 615 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 672



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3896 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 3951

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 3952 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4000

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4001 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4059

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR I DIACGS       ++    V++WG G 
Sbjct: 4060 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI-DIACGSGDAQTLCLTDDDTVWSWGDGD 4118

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4119 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4157



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/230 (33%), Positives = 108/230 (46%), Gaps = 19/230 (8%)

Query: 415  TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            TA I +  K+F +G      LG    S   VP   ETL  L              +V+VA
Sbjct: 2898 TATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVA 2942

Query: 475  GKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSI 530
            G +     ++ + K+++ G+   G+LG G +   V +P  +         KVA   G   
Sbjct: 2943 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3002

Query: 531  TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
              ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  
Sbjct: 3003 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 3062

Query: 591  EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            E+YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3063 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3112



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 570 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVIKVRCGSQFSIALT 619

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 620 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 679

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 680 GSNDQCQHFDTL----RVTKPEPTALPG-LDTKHIVGIACGPAQSFAWSS 724



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3896 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 3943

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3944 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4003

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4004 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4063

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4064 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4105


>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 420

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 181/347 (52%), Gaps = 16/347 (4%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQ-IFSWGEGSGGKLGHGVE 333
           ++   D  +  LP V+ +    +  SI CG+ H    ++  + ++SWG G  G+LGHG  
Sbjct: 45  QLGHGDAEERHLPLVISALDDCEISSITCGADHTTARSESTRTVYSWGWGDFGRLGHGNS 104

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +D+  P+ I  L G  I  +ACG+ H  A+T  G++++WG   +    LG   ++   +P
Sbjct: 105 SDLFIPRAIKGLKGLEIKQIACGDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVL--VP 162

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
            KV+   EG+ +  +  G  HTAA+T +GKL+ +G G +G LG GDR+   VP EV  + 
Sbjct: 163 NKVA-AFEGIAVKMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVP 221

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
             K  + +CG  HT A+             +S  L+T+G    GQLGHGD E  +VP  V
Sbjct: 222 GEKMNLVACGWRHTIAVA------------NSGNLYTFGWSKYGQLGHGDFEDHLVPHQV 269

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           +   + +   V+ G   T+AL   G+++  G   +GQ+G   +      ++   I +  +
Sbjct: 270 QALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNEKV 329

Query: 574 EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
             + CG  H   ++ +  VY+WG+G +GQLGHGD  ++  P  +E L
Sbjct: 330 TRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDRCVPKRIELL 376



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 114/345 (33%), Positives = 172/345 (49%), Gaps = 26/345 (7%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           S++ G+ H V +     + SWG G  G+LGHG   +   P +I AL+   I  + CG  H
Sbjct: 18  SVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISALDDCEISSITCGADH 77

Query: 360 TCAVTLSG-DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
           T A + S   +Y+WG G  + G LG  +    +IPR + G ++GL+I  I CG  H  AI
Sbjct: 78  TTARSESTRTVYSWGWG--DFGRLGHGNSSDLFIPRAIKG-LKGLEIKQIACGDSHCLAI 134

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           T  G++ ++G    G LG G      VP +V   + +   M + G  HTAA+ E      
Sbjct: 135 TGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTE------ 188

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
                 S KL+ WG G  G LG GD   R+VP  V          VACG   TIA+  +G
Sbjct: 189 ------SGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAVANSG 242

Query: 539 QVFSMGSADYGQLGSPGSTGKF-----PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
            +++ G + YGQLG     G F     P +++  +K++ I+ ++ G  H   +    E+Y
Sbjct: 243 NLYTFGWSKYGQLGH----GDFEDHLVPHQVQA-LKNKTIQAVSGGWRHTVALDEDGELY 297

Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            WG    GQ+G G+ ++  +P L+  + +++V  V CG   T AI
Sbjct: 298 GWGWNKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRHTVAI 342



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/184 (35%), Positives = 92/184 (50%), Gaps = 13/184 (7%)

Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
           + +  S G  HT A+            LS   + +WG G +GQLGHGDAE R +PL +  
Sbjct: 15  RVISVSAGASHTVAL------------LSGDLVCSWGRGEDGQLGHGDAEERHLPLVISA 62

Query: 516 SDDISFCKVACGHSITIALT-ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIE 574
            DD     + CG   T A + +T  V+S G  D+G+LG   S+  F  R    +K   I+
Sbjct: 63  LDDCEISSITCGADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGLEIK 122

Query: 575 DIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNF 634
            IACG  H   ++   EV++WG+  NGQLG G  E+   P  V A     VK +  G+  
Sbjct: 123 QIACGDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEH 182

Query: 635 TAAI 638
           TAA+
Sbjct: 183 TAAV 186



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 113/235 (48%), Gaps = 11/235 (4%)

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
           ++ S+  G  HT A+ S   + ++G G  G LGHGD     +P  +  L + +    +CG
Sbjct: 15  RVISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISALDDCEISSITCG 74

Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
             HT A  E           S++ +++WG G  G+LGHG++    +P  +K    +   +
Sbjct: 75  ADHTTARSE-----------STRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGLEIKQ 123

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHI 583
           +ACG S  +A+T  G+V S G    GQLG   +            +   ++ +A G+ H 
Sbjct: 124 IACGDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHT 183

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           A V+   ++Y WG G  G LG GD  ++  P  V A+  +++  V CG   T A+
Sbjct: 184 AAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEKMNLVACGWRHTIAV 238



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 41/67 (61%)

Query: 571 RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
           R +  ++ G+ H   + S   V +WG+G +GQLGHGD E +  P ++ AL D ++ S+ C
Sbjct: 14  RRVISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISALDDCEISSITC 73

Query: 631 GSNFTAA 637
           G++ T A
Sbjct: 74  GADHTTA 80



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 40/76 (52%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           ++   +  D   PK++   V      + CG +H V +T +G ++SWG G+ G+LGHG   
Sbjct: 306 QVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAV 365

Query: 335 DVSYPKLIDALNGSNI 350
           D   PK I+ L+   +
Sbjct: 366 DRCVPKRIELLSADGL 381


>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
            catus]
          Length = 4844

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2969 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3018

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3019 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3078

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3079 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3135

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3136 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3184

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3185 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3244

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3245 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTT 3303

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3304 VNRKPTLVQGLEGQKITRVACGSSHSVA 3331



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 192/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3960 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 4009

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4010 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4069

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4070 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4126

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+    V  +CG          +G            +
Sbjct: 4127 KGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACG----------SGDAQTLCLTDDDTV 4176

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4177 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4236

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4237 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4294

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4295 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4325



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2964 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3023

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
             G+  +    LG +S  +  IPR+++     + +  ++  G  H  A+T  GK+F++G+G
Sbjct: 3024 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3082

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 3083 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 3130

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
            WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 3131 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3190

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 3191 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3249

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 3250 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3280



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 173/355 (48%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 492

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVA 610

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 611 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 717

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 470 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 529

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 530 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 587

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 588 SSEDEAIPVLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 647 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 694

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 695 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 754

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 755 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 782



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 161/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3012 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3070

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3071 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3118

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3119 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3178

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3179 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3235

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +             
Sbjct: 3236 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAG----------- 3284

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 3285 -QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3333



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 479

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
              L             P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 480 SDTLA------------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 527 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 578 RGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 638 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 696

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 555

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 556 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACG 612

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 669

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2961 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 3007

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 3008 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3067

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3068 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3127

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3128 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3176



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 132/278 (47%), Gaps = 21/278 (7%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3961 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4016

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4017 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4065

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4066 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4124

Query: 543  MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGAN 600
             G   YG+LG   S  +   ++   ++  ++ D+ACGS       ++    V++WG G  
Sbjct: 4125 WGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDY 4184

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4185 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4222



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 674

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 735 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 779



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 109/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3961 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 4008

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 4009 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4068

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4069 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4128

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+   V  V CGS     +CL
Sbjct: 4129 RYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCL 4170



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  I          P+ +E         I CG++ ++ +T
Sbjct: 3180 GLVFSWGDGDFGKLGRGGSEGCNI----------PQNIERLNGQGVCQIECGAQFSLALT 3229

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT +G +Y W
Sbjct: 3230 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3289

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+ 
Sbjct: 3290 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3335


>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
            musculus]
          Length = 4902

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 3028 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3077

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G+++S GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3078 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3137

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3138 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3194

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3195 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3243

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3244 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3303

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3304 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3362

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3363 VNRKPTLVQGLEGQKITRVACGSSHSVA 3390



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 4018 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 4067

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4068 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4127

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4128 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4184

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + +  +CG          +G            +
Sbjct: 4185 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG----------SGDAQTLCLTDDDTV 4234

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4235 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4294

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4295 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4352

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4353 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4383



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 175/355 (49%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    +AC  K  +++++ G++++              +D+  P+L+  L 
Sbjct: 511 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLAPQLVQGLA 560

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 561 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 618

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 619 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 678

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 679 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 726

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 727 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 785

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  PT +  L  K +  + CG
Sbjct: 786 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACG 838



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 169/340 (49%), Gaps = 36/340 (10%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y+
Sbjct: 3023 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 3082

Query: 372  WGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
             G+  +    LG          Q++ +S ++ +KV+          +  G  H  A+T  
Sbjct: 3083 CGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVA----------VHSGGRHATALTVD 3132

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            GK+F++G+G  G LGH  R +   PR +E LK  +    +CG  H+AA+           
Sbjct: 3133 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT---------- 3182

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
              SS +L+TWG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G 
Sbjct: 3183 --SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3240

Query: 540  VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            VFS G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG
Sbjct: 3241 VFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3299

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               +LGHG + + + P +VE LR K++  V  G+    A+
Sbjct: 3300 DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3339



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 163/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y+  E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3071 LFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3129

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3130 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3177

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3178 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3237

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3238 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3294

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 3295 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3342

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 3343 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3392



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 163/329 (49%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  VAC E     ++ +G +YT    
Sbjct: 493 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQA-- 545

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
            +N  +L          P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 546 -YNSDMLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 594

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 595 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 645

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 646 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 705

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 706 LGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 764

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 765 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 793



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 567 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 623

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 624 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 680

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 681 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQF 737

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 738 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 795



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 4019 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4074

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4075 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4123

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4124 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4182

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR I DIACGS       ++    V++WG G 
Sbjct: 4183 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI-DIACGSGDAQTLCLTDDDTVWSWGDGD 4241

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4242 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4280



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 104/222 (46%), Gaps = 17/222 (7%)

Query: 423  KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            K+F +G      LG    S   VP   ETL  L              +V+VAG +     
Sbjct: 3027 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAGGSKSLFA 3073

Query: 483  LSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSITIALTATG 538
            ++ + K+++ G+   G+LG G +   V +P  +         KVA   G     ALT  G
Sbjct: 3074 VTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3133

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E+YTWG G
Sbjct: 3134 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLG 3193

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3194 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3235



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 693 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVIKVRCGSQFSIALT 742

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 743 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 802

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 803 GSNDQCQHFDTL----RVTKPEPTALPG-LDSKHIVGIACGPAQSFAWSS 847



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  I          P+ +E         I CG++ ++ +T
Sbjct: 3239 GLVFSWGDGDFGKLGRGGSEGCNI----------PQNIERLNGQGVCQIECGAQFSLALT 3288

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT SG +Y W
Sbjct: 3289 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3348

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+ 
Sbjct: 3349 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3394



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 4019 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 4066

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 4067 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4126

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4127 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4186

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4187 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4228


>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
          Length = 4814

 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2939 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2988

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 2989 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3048

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3049 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3105

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3106 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3154

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3155 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3214

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3215 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTT 3273

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3274 VNRKPTLVQGLEGQKITRVACGSSHSVA 3301



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3930 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 3979

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 3980 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4039

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4040 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4096

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 4097 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG----------SGDAQTLCLTDDDTV 4146

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4147 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4206

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4207 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4264

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4265 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4295



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2934 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 2993

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
             G+  +    LG +S  +  IPR+++     + +  ++  G  H  A+T  GK+F++G+G
Sbjct: 2994 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3052

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 3053 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 3100

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
            WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 3101 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3160

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 3161 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3219

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 3220 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3250



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 173/355 (48%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 420 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 469

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 470 SRNIIKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 527

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 528 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 587

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 588 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 635

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 636 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 694

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 695 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 747



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 447 NGRVYTQAYNSDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 506

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 507 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 564

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 565 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 623

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 624 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 671

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 672 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 731

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 732 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 759



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 161/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 2982 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3040

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3041 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3088

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3089 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3148

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3149 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3205

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +             
Sbjct: 3206 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAG----------- 3254

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 3255 -QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3303



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 163/329 (49%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 402 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---- 452

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEG--LQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
                   Q        P+ V G      ++I++   G  H  A+ + G+++++G G  G
Sbjct: 453 --------QAYNSDTLAPQLVQGLASRNIIKIAAHSDGH-HYLALAATGEVYSWGCGDGG 503

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 504 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 554

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 555 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 614

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 615 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 673

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 674 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 702



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 476 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 532

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 533 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 589

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 590 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 646

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 647 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 704



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2931 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 2977

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 2978 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3037

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3038 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3097

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3098 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3146



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3931 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 3986

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 3987 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4035

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4036 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4094

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + D+ACGS       ++    V++WG G 
Sbjct: 4095 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DVACGSGDAQTLCLTDDDTVWSWGDGD 4153

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4154 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4192



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 602 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 651

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 652 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 711

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 712 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 756



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3931 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 3978

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3979 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4038

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4039 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4098

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  V CGS     +CL
Sbjct: 4099 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4140



 Score = 87.4 bits (215), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  I          P+ +E         I CG++ ++ +T
Sbjct: 3150 GLVFSWGDGDFGKLGRGGSEGCNI----------PQNIERLNGQGVCQIECGAQFSLALT 3199

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT +G +Y W
Sbjct: 3200 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3259

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+ 
Sbjct: 3260 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3305


>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  189 bits (480), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2961 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3071 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3176

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3177 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3236

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3237 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3295

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3296 VNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3950 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 3999

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4000 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4059

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4060 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4116

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG----------SGDAQTLCLTDDDTV 4166

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4167 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4227 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4285 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2956 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3015

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
             G+  +    LG +S  +  IPR+++     + +  ++  G  H  A+T  GK+F++G+G
Sbjct: 3016 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 3075 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 3122

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
            WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 3183 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3241

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 173/355 (48%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 610 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 716

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 469 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 528

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 529 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 586

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 587 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 693

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 753

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 754 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 781



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 162/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3004 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3063 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3110

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3111 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3170

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3171 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3275

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 3276 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
              L             P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 479 SDTLA------------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 526 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 577 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 637 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 695

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 554

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 555 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 668

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 2999

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 3000 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3059

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3119

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3951 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4006

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4007 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4055

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4056 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4114

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + DIACGS       ++    V++WG G 
Sbjct: 4115 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDAQTLCLTDDDTVWSWGDGD 4173

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 734 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 778



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  I          P+ +E         I CG++ ++ +T
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNI----------PQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT SG +Y W
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+ 
Sbjct: 3282 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3327



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 3998

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3999 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160


>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
          Length = 4834

 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2961 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3071 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3176

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3177 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3236

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3237 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3295

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3296 VNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3950 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 3999

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4000 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4059

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4060 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4116

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG----------SGDAQTLCLTDDDTV 4166

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4167 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4227 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4285 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2956 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3015

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
             G+  +    LG +S  +  IPR+++     + +  ++  G  H  A+T  GK+F++G+G
Sbjct: 3016 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 3075 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 3122

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
            WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 3183 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3241

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 173/355 (48%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 610 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 716

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 469 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 528

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 529 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 586

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 587 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 693

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 753

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 754 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 781



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 162/352 (46%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3004 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3063 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3110

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3111 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3170

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3171 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3275

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3276 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3327



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
              L             P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 479 SDTLA------------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 526 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 577 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 637 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 695

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 554

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 555 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 668

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 2999

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 3000 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3059

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3119

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3951 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4006

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4007 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4055

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4056 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4114

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + DIACGS       ++    V++WG G 
Sbjct: 4115 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDAQTLCLTDDDTVWSWGDGD 4173

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 734 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 778



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 3998

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3999 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160


>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
 gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4834

 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2961 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3071 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3176

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3177 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3236

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3237 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3295

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3296 VNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3950 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 3999

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4000 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4059

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4060 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4116

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG----------SGDAQTLCLTDDDTV 4166

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4167 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4227 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4285 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2956 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3015

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
             G+  +    LG +S  +  IPR+++     + +  ++  G  H  A+T  GK+F++G+G
Sbjct: 3016 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 3075 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 3122

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
            WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 3183 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3241

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 173/355 (48%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 610 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 716

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 469 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 528

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 529 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 586

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 587 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 693

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 753

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 754 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 781



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 162/352 (46%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3004 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3063 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3110

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3111 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3170

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3171 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3275

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3276 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3327



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
              L             P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 479 SDTLA------------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 526 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 577 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 637 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 695

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 554

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 555 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 668

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 2999

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 3000 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3059

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3119

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3951 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4006

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4007 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4055

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4056 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4114

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + DIACGS       ++    V++WG G 
Sbjct: 4115 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDAQTLCLTDDDTVWSWGDGD 4173

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 734 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 778



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 3998

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3999 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160


>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2961 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3071 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3176

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3177 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3236

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3237 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3295

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3296 VNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3950 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 3999

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4000 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4059

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4060 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4116

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG----------SGDAQTLCLTDDDTV 4166

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4167 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4227 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4285 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2956 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3015

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
             G+  +    LG +S  +  IPR+++     + +  ++  G  H  A+T  GK+F++G+G
Sbjct: 3016 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 3075 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 3122

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
            WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 3183 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3241

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 173/355 (48%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 610 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 716

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 469 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 528

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 529 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 586

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 587 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 693

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 753

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 754 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 781



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 162/352 (46%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3004 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3063 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3110

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3111 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3170

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3171 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3275

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3276 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3327



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
              L             P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 479 SDTLA------------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 526 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 577 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 637 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 695

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 554

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 555 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 668

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 2999

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 3000 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3059

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3119

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3951 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4006

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4007 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4055

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4056 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4114

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + DIACGS       ++    V++WG G 
Sbjct: 4115 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDAQTLCLTDDDTVWSWGDGD 4173

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 734 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 778



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 3998

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3999 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160


>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2961 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3071 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3176

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3177 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3236

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3237 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3295

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3296 VNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3950 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 3999

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4000 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4059

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4060 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4116

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG----------SGDAQTLCLTDDDTV 4166

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4167 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4227 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4285 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2956 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3015

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
             G+  +    LG +S  +  IPR+++     + +  ++  G  H  A+T  GK+F++G+G
Sbjct: 3016 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 3075 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 3122

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
            WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 3183 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3241

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 173/355 (48%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 610 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 716

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 469 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 528

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 529 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 586

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 587 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 693

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 753

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 754 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 781



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 162/352 (46%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3004 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3063 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3110

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3111 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3170

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3171 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3275

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3276 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3327



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
              L             P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 479 SDTLA------------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 526 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 577 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 637 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 695

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 554

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 555 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 668

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 2999

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 3000 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3059

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3119

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3951 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4006

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4007 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4055

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4056 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4114

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + DIACGS       ++    V++WG G 
Sbjct: 4115 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDAQTLCLTDDDTVWSWGDGD 4173

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 734 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 778



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 3998

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3999 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160


>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2961 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3071 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3176

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3177 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3236

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3237 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3295

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3296 VNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3950 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 3999

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4000 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4059

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4060 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4116

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG----------SGDAQTLCLTDDDTV 4166

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4167 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4227 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4285 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2956 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3015

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
             G+  +    LG +S  +  IPR+++     + +  ++  G  H  A+T  GK+F++G+G
Sbjct: 3016 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 3075 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 3122

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
            WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 3183 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3241

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 173/355 (48%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 610 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 716

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 469 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 528

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 529 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 586

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 587 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 693

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 753

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 754 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 781



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 162/352 (46%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3004 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3063 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3110

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3111 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3170

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3171 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3275

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3276 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3327



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
              L             P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 479 SDTLA------------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 526 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 577 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 637 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 695

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 554

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 555 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 668

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 2999

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 3000 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3059

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3119

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3951 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4006

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4007 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4055

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4056 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4114

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + DIACGS       ++    V++WG G 
Sbjct: 4115 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDAQTLCLTDDDTVWSWGDGD 4173

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 734 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 778



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 3998

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3999 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160


>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2961 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3071 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3176

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3177 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3236

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3237 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3295

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3296 VNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3950 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 3999

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4000 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4059

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4060 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4116

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG----------SGDAQTLCLTDDDTV 4166

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4167 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4227 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4285 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2956 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3015

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
             G+  +    LG +S  +  IPR+++     + +  ++  G  H  A+T  GK+F++G+G
Sbjct: 3016 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 3075 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 3122

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
            WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 3183 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3241

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 173/355 (48%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 610 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 716

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 469 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 528

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 529 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 586

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 587 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 693

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 753

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 754 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 781



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 162/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3004 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3063 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3110

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3111 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3170

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3171 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3275

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 3276 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
              L             P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 479 SDTLA------------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 526 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 577 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 637 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 695

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 554

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 555 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 668

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 2999

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 3000 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3059

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3119

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3951 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4006

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4007 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4055

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4056 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4114

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + DIACGS       ++    V++WG G 
Sbjct: 4115 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDAQTLCLTDDDTVWSWGDGD 4173

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 734 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 778



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  I          P+ +E         I CG++ ++ +T
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNI----------PQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT SG +Y W
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+ 
Sbjct: 3282 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3327



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 3998

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3999 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160


>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4628

 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2732 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2781

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G+I++ GE + G+LG G+ +  +  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 2782 GKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 2841

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AAITS+G+L+++G G 
Sbjct: 2842 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKAKRIRDIACGSSHSAAITSSGELYSWGLGE 2898

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 2899 YGRLGHGDNTTQLRPKLVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 2947

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 2948 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3007

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3008 LGHGTDVHVRKPQMVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTT 3066

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3067 VNRKPTLVQGLEGQKITRVACGSSHSVA 3094



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 169/340 (49%), Gaps = 36/340 (10%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2727 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYA 2786

Query: 372  WGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
             G+  +    LG          Q++ +S+++ +KV+          +  G  H  A+T  
Sbjct: 2787 CGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVA----------VHSGGRHAMALTVD 2836

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            GK+F++G+G  G LGH  R +   PR +E LK  +    +CG  H+AAI           
Sbjct: 2837 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAIT---------- 2886

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
              SS +L++WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G 
Sbjct: 2887 --SSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL 2944

Query: 540  VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            VFS G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG
Sbjct: 2945 VFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3003

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               +LGHG + + + P +VE LR K++  V  G+    A+
Sbjct: 3004 DYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAV 3043



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 165/333 (49%), Gaps = 26/333 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G ++  GE   NG LG  ++   I    +  AL      S  V+   ++  G +HA+ +T
Sbjct: 2782 GKIYACGEAT-NGRLGLGLSSGTIPIPRQITAL------SNYVVKKVAVHSGGRHAMALT 2834

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
              G++FSWGEG  GKLGH    +   P+LI+AL    I  +ACG  H+ A+T SG+LY+W
Sbjct: 2835 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGELYSW 2894

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDG 430
            G G    G LG     +   P+ V   + G ++  + CG     T A+T  G +F++GDG
Sbjct: 2895 GLG--EYGRLGHGDNTTQLRPKLVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 2951

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             FG LG G     ++P+ +E L         CG   + A+ +            S  ++T
Sbjct: 2952 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 2999

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WG G   +LGHG       P  V+         VA G    +A+T TGQV++ G  D+GQ
Sbjct: 3000 WGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3059

Query: 551  LGSPGST-GKFPTRIEGNIKHRYIEDIACGSYH 582
             G+  +T  + PT ++G ++ + I  +ACGS H
Sbjct: 3060 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSH 3091



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 193/406 (47%), Gaps = 46/406 (11%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3755 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPTEALATLRPVQLIGGEQTLFA 3804

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 3805 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGE 3864

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  I  G  H+A IT++G+LFT+G
Sbjct: 3865 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGVEVVDIAAGGAHSACITASGELFTWG 3921

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGHGD      P+ V+ L+  + +  +CG          +G            +
Sbjct: 3922 KGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACG----------SGDAQTLCLTDDDMV 3971

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++    P+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 3972 WSWGDGDYGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDY 4031

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS---------------- 590
             +LG  GS    + P +++G ++ + +  IA GS H    +                   
Sbjct: 4032 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGRIKVFQWGLPRWSLGL 4089

Query: 591  -EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
             EVYTWG    GQLG G     Q P LV AL+ K++  V CGS  T
Sbjct: 4090 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHT 4135



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 148/300 (49%), Gaps = 26/300 (8%)

Query: 306 KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS----NIHMVACGEFHTC 361
           +H + ++  G++FSWG G GG+LGHG    +  P +I A NG     ++  +ACG  ++ 
Sbjct: 468 QHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTYSA 527

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAIT 419
           A+T+ G+LYTWG G  N G LG  S      P  V+  ++GL++  + CG     T A+T
Sbjct: 528 AITVDGELYTWGRG--NYGRLGHGSSEDQTTPMLVTA-LKGLKVVDVACGSGDAQTLAVT 584

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G+++++GDG +G LG G       P+ VE L++L  V   CG   + A+ +       
Sbjct: 585 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTK------- 637

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                  +++TWG G   +LGHG  E    P  +          VA G +  +ALT  G+
Sbjct: 638 -----DGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGE 692

Query: 540 VFSMGSADYGQ-LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           V S GS D  Q   +  S  K P  + G +  ++I  I+CG       SS SE   W  G
Sbjct: 693 VHSWGSNDKLQHFDTLFSNKKQPKALPG-LNSKHIVGISCGPGQSFAWSSCSE---WSVG 748



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 167/369 (45%), Gaps = 45/369 (12%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G+V+ WGE   +G LG        S  DR     P+V+ES   ++   IA G  H+  +T
Sbjct: 3863 GEVYSWGEA-EDGKLGHGNR----SPCDR-----PRVIESLRGVEVVDIAAGGAHSACIT 3912

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD--LY 370
              G++F+WG+G  G+LGHG   D   PKL+DAL G  +  VACG      + L+ D  ++
Sbjct: 3913 ASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVW 3972

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+        P K+   + GL +  + CG   + A+T +G ++T+G G
Sbjct: 3973 SWGDG--DYGKLGRGGSDGCKTPMKID-SLTGLGVIKVECGSQFSVALTKSGAVYTWGKG 4029

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA-------GKTSGSNGL 483
             +  LGHG       PR+V+ L+  K +  + G  H     E         G    S GL
Sbjct: 4030 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQWGLPRWSLGL 4089

Query: 484  SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
               +++TWGD  EGQLG G       P  V         +VACG + T++ + +      
Sbjct: 4090 G--EVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLSWSTS------ 4141

Query: 544  GSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG------K 597
                      P + GK P ++     H     I      + ++   SE++         +
Sbjct: 4142 ---------KPTNAGKLPAQVPMEYNHLQEISIMALRNRLLLLHHISELFCPCIPMFDLE 4192

Query: 598  GANGQLGHG 606
            G  GQ GHG
Sbjct: 4193 GRLGQTGHG 4201



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 161/352 (45%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 2775 LFAVTVEGKIYACGEATNGRLGLGLSSGTIPI-PRQITALSNYVVKKVAVHSGGRHAMAL 2833

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 2834 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKAKRIRDIACGSSH 2881

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G+++SWG G  G+LGHG       PKL+  L G  +  VACG  +  T A+T 
Sbjct: 2882 SAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTD 2941

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 2942 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 2998

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +             
Sbjct: 2999 TWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTG----------- 3047

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3048 -QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3098



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 161/330 (48%), Gaps = 36/330 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++ +WG      LG  + A+V+ P    +L+   +  + C E     ++ SG +YT    
Sbjct: 387 EVIAWG-----LLGWKLYANVNGPIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNYK 441

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
              L  +  +  +S     K++   +G           H  A++S G++F++G G  G L
Sbjct: 442 STTLAPM-LIHSLSSRKMVKLAAHPDGQ----------HYLALSSNGEVFSWGCGDGGRL 490

Query: 436 GHGDRSSTSVPREVETLKELK----TVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           GHGD +    P  +      +     V  +CG  ++AAI  V G+           L+TW
Sbjct: 491 GHGDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAAIT-VDGE-----------LYTW 538

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYG 549
           G G  G+LGHG +E +  P+ V     +    VACG   + T+A+T  GQV+S G  DYG
Sbjct: 539 GRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYG 598

Query: 550 QLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           +LG  GS G K P  +E  ++   I  + CGS     ++   +VYTWGKG N +LGHG +
Sbjct: 599 KLGRGGSDGCKTPKLVE-KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD 657

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           E+ + P L++ L+ K+V  V  GS    A+
Sbjct: 658 EHVRFPKLLDTLQGKKVVDVAVGSTHCLAL 687



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 168/347 (48%), Gaps = 39/347 (11%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
           L    I C  K  ++++  G +++             ++    P LI +L+   +  +A 
Sbjct: 414 LGVTQIVCSEKGFLILSSSGAVYT----------QNYKSTTLAPMLIHSLSSRKMVKLAA 463

Query: 356 ---GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQMEGLQISSIC 409
              G+ H  A++ +G++++WG G  + G LG         P  ++   G+  G  +  I 
Sbjct: 464 HPDGQ-HYLALSSNGEVFSWGCG--DGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVHIA 520

Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV--WHT 467
           CG  ++AAIT  G+L+T+G G +G LGHG     + P  V  LK LK V  +CG     T
Sbjct: 521 CGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQT 580

Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
            A+ E        NG    ++++WGDG  G+LG G ++    P  V+   D+   KV CG
Sbjct: 581 LAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCG 628

Query: 528 HSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
              ++ALT  GQV++ G  D  +LG       +FP  ++  ++ + + D+A GS H   +
Sbjct: 629 SQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLD-TLQGKKVVDVAVGSTHCLAL 687

Query: 587 SSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           +   EV++WG  +N +L H D    NK+ P  +  L  K +  + CG
Sbjct: 688 TDDGEVHSWG--SNDKLQHFDTLFSNKKQPKALPGLNSKHIVGISCG 732



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 135/272 (49%), Gaps = 16/272 (5%)

Query: 208 LNFVASGGLDDANSRSSTADSFRI-SLSS----AVSSSSQGSCHEDFDGLGDVFIWGEGL 262
           L   +SG +   N +S+T     I SLSS     +++   G  +      G+VF WG G 
Sbjct: 427 LILSSSGAVYTQNYKSTTLAPMLIHSLSSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGD 486

Query: 263 GNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGE 322
           G  L  G    +E        A   K     VV     IACGS ++  +T  G++++WG 
Sbjct: 487 GGRLGHGDTTYLE--EPTMIAAFNGKQAGKHVV----HIACGSTYSAAITVDGELYTWGR 540

Query: 323 GSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLG 380
           G+ G+LGHG   D + P L+ AL G  +  VAC  G+  T AVT +G +++WGDG  + G
Sbjct: 541 GNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDG--DYG 598

Query: 381 LLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR 440
            LG+        P+ V  +++ L I  +CCG   + A+T  G+++T+G G    LGHG  
Sbjct: 599 KLGRGGSDGCKTPKLVE-KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD 657

Query: 441 SSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
                P+ ++TL+  K V  + G  H  A+ +
Sbjct: 658 EHVRFPKLLDTLQGKKVVDVAVGSTHCLALTD 689



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 111/234 (47%), Gaps = 21/234 (8%)

Query: 415  TAAITSAG----KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
            ++ + SAG    K+F +G      LG    S   VP   ETL  L              +
Sbjct: 2719 SSGLESAGTIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------V 2765

Query: 471  VEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC-- 526
            V+VAG +     ++ + K++  G+   G+LG G +   + +P  +    +    KVA   
Sbjct: 2766 VQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHS 2825

Query: 527  GHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
            G    +ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A +
Sbjct: 2826 GGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAI 2885

Query: 587  SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +S  E+Y+WG G  G+LGHGDN  +  P LV+ L   +V  V CGS     + L
Sbjct: 2886 TSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLAL 2939



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 135/279 (48%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3756 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPTEA-LATLRPVQLIGGEQTLFAVTADGKL 3811

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   ++ V  + G  H  A+            
Sbjct: 3812 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALS----------- 3860

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    +    +A G + +  +TA+G++F+
Sbjct: 3861 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFT 3919

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  ++    HR I D+ACGS       ++    V++WG G 
Sbjct: 3920 WGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI-DVACGSGDAQTLCLTDDDMVWSWGDGD 3978

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  +TP  +++L    V  V CGS F+ A+
Sbjct: 3979 YGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVAL 4017



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 111/222 (50%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3756 SGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQL------------IGGEQTLF 3803

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3804 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 3863

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + DIA G  H A +++  E++TWGKG
Sbjct: 3864 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKG 3923

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++  P LV+AL+  +V  V CGS     +CL
Sbjct: 3924 RYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCL 3965



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 87/170 (51%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ +V +T
Sbjct: 587 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLVEKLQDLDIVKVCCGSQFSVALT 636

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ+++WG+G   +LGHG +  V +PKL+D L G  +  VA G  H  A+T  G++++W
Sbjct: 637 KDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSW 696

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D + +   L    +     P+ + G +    I  I CGP  + A +S
Sbjct: 697 GSNDKLQHFDTLFSNKK----QPKALPG-LNSKHIVGISCGPGQSFAWSS 741



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 106/219 (48%), Gaps = 27/219 (12%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           G+++ WG G    LG+G           SS D+   +L   L+   V+D   +ACGS  A
Sbjct: 533 GELYTWGRGNYGRLGHG-----------SSEDQTTPMLVTALKGLKVVD---VACGSGDA 578

Query: 309 --VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
             + VT+ GQ++SWG+G  GKLG G       PKL++ L   +I  V CG   + A+T  
Sbjct: 579 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKD 638

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
           G +YTWG G +    LG  ++     P K+   ++G ++  +  G  H  A+T  G++ +
Sbjct: 639 GQVYTWGKGDNQ--RLGHGTDEHVRFP-KLLDTLQGKKVVDVAVGSTHCLALTDDGEVHS 695

Query: 427 FGDGTFGALGHGDR--SSTSVPREVETLKELKTVMASCG 463
           +G      L H D   S+   P+ +  L     V  SCG
Sbjct: 696 WGSND--KLQHFDTLFSNKKQPKALPGLNSKHIVGISCG 732


>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Nomascus leucogenys]
          Length = 4530

 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2657 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2706

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 2707 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2766

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 2767 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2823

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 2824 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 2872

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 2873 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 2932

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 2933 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 2991

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 2992 VNRKPTLVQGLEGQKITRVACGSSHSVA 3019



 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3646 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 3695

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 3696 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 3755

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 3756 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 3812

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 3813 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG----------SGDAQTLCLTDDDTV 3862

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 3863 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 3922

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 3923 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 3980

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 3981 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4011



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2652 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 2711

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
             G+  +    LG +S  +  IPR+++     + +  ++  G  H  A+T  GK+F++G+G
Sbjct: 2712 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2770

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 2771 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 2818

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
            WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 2819 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2878

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 2879 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 2937

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 2938 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 2968



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 162/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 2700 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 2758

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 2759 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 2806

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 2807 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 2866

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 2867 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 2923

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 2924 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 2971

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 2972 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3021



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2649 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 2695

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 2696 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 2755

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 2756 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 2815

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 2816 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 2864



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3647 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 3702

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 3703 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 3751

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 3752 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 3810

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + DIACGS       ++    V++WG G 
Sbjct: 3811 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDAQTLCLTDDDTVWSWGDGD 3869

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 3870 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3908



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3647 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 3694

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3695 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3754

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 3755 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3814

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 3815 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 3856



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  I          P+ +E         I CG++ ++ +T
Sbjct: 2868 GLVFSWGDGDFGKLGRGGSEGCNI----------PQNIERLNGQGVCQIECGAQFSLALT 2917

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT SG +Y W
Sbjct: 2918 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 2977

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+ 
Sbjct: 2978 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3023



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 17/182 (9%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 397 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 446

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 447 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 504

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 505 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 564

Query: 462 CG 463
           CG
Sbjct: 565 CG 566



 Score = 82.8 bits (203), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 63/105 (60%), Gaps = 4/105 (3%)

Query: 532 IALTATGQVFSMGSADYGQLGS----PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
           +AL ATG+V+S G  D G+LG     P    K  +   G    +++  IACGS + A ++
Sbjct: 463 LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT 522

Query: 588 SKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
           ++ E+YTWG+G  G+LGHG +E++  P LV  L+  +V  V CGS
Sbjct: 523 AEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGS 567



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 32/225 (14%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 379 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---- 429

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
                   Q        P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 430 --------QAYNSDTLAPQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 480

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 481 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 531

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALT 535
            G  G+LGHG +E   +P+ V     +    VAC  G + T+A+T
Sbjct: 532 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVT 576



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 64/118 (54%), Gaps = 7/118 (5%)

Query: 470 IVEVAGKTSGSNGLS---SKKLFTWGDGAEGQLGHGDA----EPRVVPLCVKVSDDISFC 522
           IV++A  + G + L+   + ++++WG G  G+LGHGD     EP+V+             
Sbjct: 450 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 509

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS 580
            +ACG + + A+TA G++++ G  +YG+LG   S  +    +   +K   + D+ACGS
Sbjct: 510 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGS 567



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 16/127 (12%)

Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIA 577
           ++   ++AC     + L+  G+V++             S    P  ++G +  R I  IA
Sbjct: 405 NLGVTQIACAEKRFLILSRNGRVYTQAY---------NSDTLAPQLVQG-LASRNIVKIA 454

Query: 578 CGS--YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ----VKSVVCG 631
             S  +H   +++  EVY+WG G  G+LGHGD    + P ++ A   KQ    V  + CG
Sbjct: 455 AHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACG 514

Query: 632 SNFTAAI 638
           S ++AAI
Sbjct: 515 STYSAAI 521


>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Loxodonta africana]
          Length = 4838

 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2963 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3012

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3013 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3072

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AAITS+G+L+T+G G 
Sbjct: 3073 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3129

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3130 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3178

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3179 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3238

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3239 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTT 3297

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3298 VNRKPTLVQGLEGQKITRVACGSSHSVA 3325



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3954 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALAALRPVQLIGGEQTLFA 4003

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4004 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGE 4063

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR V   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4064 VYSWGEA--EDGKLGHGNRSPCDRPRVVE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4120

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 4121 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG----------SGDAQTLCLTDDDTV 4170

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4171 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4230

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4231 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4288

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4289 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4319



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/340 (32%), Positives = 168/340 (49%), Gaps = 36/340 (10%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2958 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3017

Query: 372  WGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
             G+  +    LG          Q++ +S ++ +KV+          +  G  H  A+T  
Sbjct: 3018 CGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVA----------VHSGGRHATALTVD 3067

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            GK+F++G+G  G LGH  R +   PR +E LK  +    +CG  H+AAI           
Sbjct: 3068 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT---------- 3117

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
              SS +L+TWG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G 
Sbjct: 3118 --SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3175

Query: 540  VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            VFS G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG
Sbjct: 3176 VFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3234

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               +LGHG + + + P +VE LR K++  V  G+    A+
Sbjct: 3235 DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3274



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 186/394 (47%), Gaps = 42/394 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 443 PIQCEGLASLGVTQIACAEKRFLILSRSGRVYT----------QAYNSDALAPQLVQGLA 492

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 493 SRNIIKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG      +P  V  LK LK +  +
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVA 610

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 611 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 717

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG--SNF 634
           GS H   ++  SEV++W  G+N Q  H D     K  P+ +  L  K +  + CG   +F
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACGPAQSF 775

Query: 635 TAAICLHKGVSIADH---SICSGCRNQFNFRRRR 665
             + C    + +       ICS    Q +   R+
Sbjct: 776 AWSSCSEWSIGLRVPFVVDICSMTFEQLDLLLRQ 809



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 158/318 (49%), Gaps = 25/318 (7%)

Query: 283 DALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPK 340
           DAL P++++     +   IA  S   H + +   G+++SWG G GG+LGHG    +  PK
Sbjct: 481 DALAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPK 540

Query: 341 LIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV 396
           +I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  S     IP  V
Sbjct: 541 VISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHGSSEDEVIPVLV 598

Query: 397 SGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           +G ++GL++  + CG     T A+T  G+++++GDG +G LG G       P+ +E L++
Sbjct: 599 AG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 657

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
           L  V   CG   + A+ +              ++++WG G   +LGHG  E    P  ++
Sbjct: 658 LDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705

Query: 515 VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPTRIEGNIKHRYI 573
                    VA G +  +ALT   +V S GS D  Q   +   T   P+ + G +  ++I
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSALPG-LDTKHI 764

Query: 574 EDIACGSYHIAVVSSKSE 591
             IACG       SS SE
Sbjct: 765 VGIACGPAQSFAWSSCSE 782



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 164/329 (49%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ SG +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVTQIACAEKRFLILSRSGRVYT---- 475

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEG--LQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
                   Q        P+ V G      ++I++   G  H  A+ + G+++++G G  G
Sbjct: 476 --------QAYNSDALAPQLVQGLASRNIIKIAAHSDGH-HYLALAATGEVYSWGCGDGG 526

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 527 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E  V+P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 578 RGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 638 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 696

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 161/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3006 LFAVTVEGKVYACGEATNGRLGLGLSSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3064

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3065 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3112

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3113 SAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3172

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3173 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3229

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +             
Sbjct: 3230 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAG----------- 3278

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 3279 -QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3327



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 119/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 555

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D   P L+  L G  +  VAC 
Sbjct: 556 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACG 612

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 669

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2955 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 3001

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 3002 GSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3061

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3062 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 3121

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3122 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3170



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3955 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LAALRPVQLIGGEQTLFAVTADGKL 4010

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4011 YATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALS----------- 4059

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  V+    I    VA G + +  +TA G +++
Sbjct: 4060 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYT 4118

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + DIACGS       ++    V++WG G 
Sbjct: 4119 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDAQTLCLTDDDTVWSWGDGD 4177

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4178 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4216



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 674

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 735 GSNDQCQHFDTL----RVTKPEPSALPG-LDTKHIVGIACGPAQSFAWSS 779



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3955 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQL------------IGGEQTLF 4002

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 4003 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEG 4062

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4063 EVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4122

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4123 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4164



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  I          P+ +E         I CG++ ++ +T
Sbjct: 3174 GLVFSWGDGDFGKLGRGGSEGCNI----------PQNIERLNGQGVCQIECGAQFSLALT 3223

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT +G +Y W
Sbjct: 3224 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3283

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+ 
Sbjct: 3284 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3329



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 15/178 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VL 310
           G+++ WG G          N   +      D ++P ++     L    +ACGS  A  + 
Sbjct: 571 GELYTWGRG----------NYGRLGHGSSEDEVIPVLVAGLKGLKVIDVACGSGDAQTLA 620

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           VT+ GQ++SWG+G  GKLG G       PKLI+ L   ++  V CG   + A+T  G +Y
Sbjct: 621 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVY 680

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +WG G +    LG  +E     P+ + G ++G ++  +  G  H  A+T   ++ ++G
Sbjct: 681 SWGKGDNQ--RLGHGTEEHVRYPKLLEG-LQGKKVIDVAAGSTHCLALTEDSEVHSWG 735


>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Pan paniscus]
          Length = 4839

 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2966 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3015

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3016 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3075

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3076 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3132

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3133 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3181

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3182 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3241

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3242 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3300

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3301 VNRKPTLVQGLEGQKITRVACGSSHSVA 3328



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3955 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 4004

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4005 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4064

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4065 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4121

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 4122 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG----------SGDAQTLCLTDDDTV 4171

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4172 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4231

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4232 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4289

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4290 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4320



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2961 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3020

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
             G+  +    LG +S  +  IPR+++     + +  ++  G  H  A+T  GK+F++G+G
Sbjct: 3021 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3079

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 3080 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 3127

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
            WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 3128 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3187

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 3188 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3246

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 3247 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3277



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 173/355 (48%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 388 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 437

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 438 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 495

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 496 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 555

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 556 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 603

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 604 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 662

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 663 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 715



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 415 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 474

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 475 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 532

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 533 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 591

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 592 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 639

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 640 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 699

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 700 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 727



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 162/352 (46%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3009 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3067

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3068 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3115

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3116 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3175

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3176 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3232

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 3233 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3280

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3281 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3332



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 370 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---- 420

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
                   Q        P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 421 --------QAYNSDTLAPQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 471

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 472 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 522

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 523 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 582

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 583 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 641

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 642 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 670



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 444 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 500

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 501 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 557

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 558 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 614

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 615 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 672



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2958 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 3004

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 3005 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3064

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3065 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3124

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3125 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3173



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3956 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4011

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4012 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4060

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4061 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4119

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + DIACGS       ++    V++WG G 
Sbjct: 4120 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDAQTLCLTDDDTVWSWGDGD 4178

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4217



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 570 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 619

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 620 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 679

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 680 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 724



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 4003

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 4004 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4123

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4124 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4165


>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
          Length = 4836

 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2962 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3072 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3177

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3178 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3237

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3238 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTT 3296

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3297 VNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 192/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3952 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALAALRPVQLIGGEQTLFA 4001

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4002 VTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4061

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G ++  +  G  H+A +T+AG L+T+G
Sbjct: 4062 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGTEVVDVAAGGAHSACVTAAGDLYTWG 4118

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 4119 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG----------SGDAQTLCLTDDDTV 4168

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4169 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4228

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    S   EVYTWG    GQLG G
Sbjct: 4229 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDG 4286

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4287 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3016

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
             G+  +    LG +S  +  IPR+++     + +  ++  G  H  A+T  GK+F++G+G
Sbjct: 3017 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 3076 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 3123

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
            WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 3184 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3242

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 174/355 (49%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 492

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 611 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 717

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P+ +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 770



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 161/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 470 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 529

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 530 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 587

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 588 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 647 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 694

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P+
Sbjct: 695 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPS 754

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 755 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 782



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 161/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3005 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3064 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3111

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3112 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3172 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +             
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAG----------- 3277

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 3278 -QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---- 475

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
                   Q        P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 476 --------QAYNSDTLAPQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 527 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 578 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 638 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 696

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 555

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 556 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 612

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 669

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 3000

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 3001 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3060

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3120

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3953 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LAALRPVQLIGGEQTLFAVTADGKL 4008

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4009 YATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4057

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++         VA G + +  +TA G +++
Sbjct: 4058 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYT 4116

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + D+ACGS       ++    V++WG G 
Sbjct: 4117 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DVACGSGDAQTLCLTDDDTVWSWGDGD 4175

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4214



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 674

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 735 GSNDQCQHFDTL----RVTKPEPSALPG-LDTKHIVGIACGPAQSFAWSS 779



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQL------------IGGEQTLF 4000

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 4001 AVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKG 4120

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  V CGS     +CL
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4162



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  I          P+ +E         I CG++ ++ +T
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNI----------PQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT +G +Y W
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+ 
Sbjct: 3283 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3328


>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
          Length = 4822

 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2947 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2996

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G+I++ GE + G+LG G+ +  +  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 2997 GKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3056

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AAITS+G+L+++G G 
Sbjct: 3057 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGLGE 3113

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3114 YGRLGHGDNATQLRPKLVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3162

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3163 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3222

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3223 LGHGTDVHVRKPQMVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTT 3281

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3282 VNRKPTLVQGLEGQKITRVACGSSHSVA 3309



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 195/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3938 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPTEALATLRPVQLIGGEQTLFA 3987

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 3988 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGE 4047

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  I  G  H+A IT++G+LFT+G
Sbjct: 4048 VYSWGEA--EDGKLGHGNRSPCDRPRVIES-LRGVEVVDIAAGGAHSACITASGELFTWG 4104

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGHGD      P+ V+ L+  + +  +CG          +G            +
Sbjct: 4105 KGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACG----------SGDAQTLCLTDDDMV 4154

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   +P+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4155 WSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDY 4214

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4215 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4272

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K++  V CGS  T A
Sbjct: 4273 TTNAIQRPRLVAALQGKKINRVACGSAHTLA 4303



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 169/340 (49%), Gaps = 36/340 (10%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2942 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYA 3001

Query: 372  WGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
             G+  +    LG          Q++ +S+++ +KV+          +  G  H  A+T  
Sbjct: 3002 CGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVA----------VHSGGRHAMALTVD 3051

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            GK+F++G+G  G LGH  R +   PR +E LK  +    +CG  H+AAI           
Sbjct: 3052 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT---------- 3101

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
              SS +L++WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G 
Sbjct: 3102 --SSGELYSWGLGEYGRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGL 3159

Query: 540  VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            VFS G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG
Sbjct: 3160 VFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3218

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               +LGHG + + + P +VE LR K++  V  G+    A+
Sbjct: 3219 DYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAV 3258



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 165/333 (49%), Gaps = 26/333 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G ++  GE   NG LG  ++   I    +  AL      S  V+   ++  G +HA+ +T
Sbjct: 2997 GKIYACGEAT-NGRLGLGLSSGTIPIPRQITAL------SNYVVKKVAVHSGGRHAMALT 3049

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
              G++FSWGEG  GKLGH    +   P+LI+AL    I  +ACG  H+ A+T SG+LY+W
Sbjct: 3050 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSW 3109

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDG 430
            G G    G LG     +   P+ V   + G ++  + CG     T A+T  G +F++GDG
Sbjct: 3110 GLG--EYGRLGHGDNATQLRPKLVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3166

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             FG LG G     ++P+ +E L         CG   + A+ +            S  ++T
Sbjct: 3167 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3214

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WG G   +LGHG       P  V+         VA G    +A+T TGQV++ G  D+GQ
Sbjct: 3215 WGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3274

Query: 551  LGSPGST-GKFPTRIEGNIKHRYIEDIACGSYH 582
             G+  +T  + PT ++G ++ + I  +ACGS H
Sbjct: 3275 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSH 3306



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 165/362 (45%), Gaps = 48/362 (13%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G+V+ WGE   +G LG        S  DR     P+V+ES   ++   IA G  H+  +T
Sbjct: 4046 GEVYSWGEA-EDGKLGHGNR----SPCDR-----PRVIESLRGVEVVDIAAGGAHSACIT 4095

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD--LY 370
              G++F+WG+G  G+LGHG   D   PKL+DAL G  +  VACG      + L+ D  ++
Sbjct: 4096 ASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVW 4155

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+       IP K+   + GL ++ + CG   + A+T +G ++T+G G
Sbjct: 4156 SWGDG--DYGKLGRGGSDGCKIPMKIDS-LTGLGVTKVECGSQFSVALTKSGAVYTWGKG 4212

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +  LGHG       PR+V+ L+  K +  + G  H     E              +++T
Sbjct: 4213 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4260

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGD  EGQLG G       P  V         +VACG + T+A + +             
Sbjct: 4261 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 4307

Query: 551  LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG------KGANGQLG 604
               P + GK P ++     H     I      + ++   SE++         +G  GQ G
Sbjct: 4308 --KPTNAGKLPAQVPMEYNHLQEISIMALRNRLLLLHHISELFCPCIPMFDLEGRLGQTG 4365

Query: 605  HG 606
            HG
Sbjct: 4366 HG 4367



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/299 (33%), Positives = 146/299 (48%), Gaps = 27/299 (9%)

Query: 306 KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS----NIHMVACGEFHTC 361
           +H + ++  G++FSWG G GG+LGHG    +  P +I A NG     ++  +ACG  ++ 
Sbjct: 491 QHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHVVHIACGSTYSA 550

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAIT 419
            +T+ G+LYTWG G  N G LG  S      P  V+  ++GL++  + CG     T A+T
Sbjct: 551 VITIDGELYTWGRG--NYGRLGHGSSEDQTTPMLVTA-LKGLKVVDVACGSGDAQTLAVT 607

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G+++++GDG +G LG G       P+ VE L++L  V   CG   + A+ +       
Sbjct: 608 ENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTK------- 660

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                  +++TWG G   +LGHG  E    P  +          VA G +  +ALT  G+
Sbjct: 661 -----DGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGE 715

Query: 540 VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           V S GS D  Q     S  K P  + G +KH  I  I+CG       SS SE   W  G
Sbjct: 716 VHSWGSNDKLQHFDTLSNKKQPKALPG-LKH--IVGISCGPGQSFAWSSCSE---WSVG 768



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 162/352 (46%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 2990 LFAVTVEGKIYACGEATNGRLGLGLSSGTIPI-PRQITALSNYVVKKVAVHSGGRHAMAL 3048

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3049 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3096

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G+++SWG G  G+LGHG  A    PKL+  L G  +  VACG  +  T A+T 
Sbjct: 3097 SAAITSSGELYSWGLGEYGRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTD 3156

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3157 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3213

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +             
Sbjct: 3214 TWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTG----------- 3262

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3263 -QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3313



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 161/330 (48%), Gaps = 36/330 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++ +WG      LG  + A+VS P    +L+   +  + C E     ++ SG +YT    
Sbjct: 410 EVIAWG-----LLGWKLHANVSGPIHCKSLSSLGVTQIVCSEKGFLILSSSGAVYTQNYK 464

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
              L  +  +  +S     K++   +G           H  A++S G++F++G G  G L
Sbjct: 465 STTLAPM-LIHSLSSRKIVKLAAHPDGQ----------HYLALSSNGEVFSWGCGDGGRL 513

Query: 436 GHGDRSSTSVPREVETLKELK----TVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           GHGD +    P  +      +     V  +CG  ++A ++ + G+           L+TW
Sbjct: 514 GHGDATYLEEPTMIAAFNGKQAGKHVVHIACGSTYSA-VITIDGE-----------LYTW 561

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYG 549
           G G  G+LGHG +E +  P+ V     +    VACG   + T+A+T  GQV+S G  DYG
Sbjct: 562 GRGNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYG 621

Query: 550 QLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           +LG  GS G K P  +E  ++   I  + CGS     ++   +VYTWGKG N +LGHG +
Sbjct: 622 KLGRGGSDGCKTPKLVE-KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD 680

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           E+ + P L++ L+ K+V  V  GS    A+
Sbjct: 681 EHVRFPKLLDTLQGKKVVDVAVGSTHCLAL 710



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 136/272 (50%), Gaps = 16/272 (5%)

Query: 208 LNFVASGGLDDANSRSSTADSFRI-SLSS----AVSSSSQGSCHEDFDGLGDVFIWGEGL 262
           L   +SG +   N +S+T     I SLSS     +++   G  +      G+VF WG G 
Sbjct: 450 LILSSSGAVYTQNYKSTTLAPMLIHSLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGD 509

Query: 263 GNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGE 322
           G  L  G  +   +       A   K     VV     IACGS ++ ++T  G++++WG 
Sbjct: 510 GGRL--GHGDATYLEEPTMIAAFNGKQAGKHVV----HIACGSTYSAVITIDGELYTWGR 563

Query: 323 GSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLG 380
           G+ G+LGHG   D + P L+ AL G  +  VAC  G+  T AVT +G +++WGDG  + G
Sbjct: 564 GNYGRLGHGSSEDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDG--DYG 621

Query: 381 LLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR 440
            LG+        P+ V  +++ L I  +CCG   + A+T  G+++T+G G    LGHG  
Sbjct: 622 KLGRGGSDGCKTPKLVE-KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTD 680

Query: 441 SSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
                P+ ++TL+  K V  + G  H  A+ +
Sbjct: 681 EHVRFPKLLDTLQGKKVVDVAVGSTHCLALTD 712



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 111/234 (47%), Gaps = 21/234 (8%)

Query: 415  TAAITSAG----KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
            ++ + SAG    K+F +G      LG    S   VP   ETL  L              +
Sbjct: 2934 SSGLESAGTIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------V 2980

Query: 471  VEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC-- 526
            V+VAG +     ++ + K++  G+   G+LG G +   + +P  +    +    KVA   
Sbjct: 2981 VQVAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHS 3040

Query: 527  GHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
            G    +ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A +
Sbjct: 3041 GGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAI 3100

Query: 587  SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +S  E+Y+WG G  G+LGHGDN  +  P LV+ L   +V  V CGS     + L
Sbjct: 3101 TSSGELYSWGLGEYGRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLAL 3154



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 134/279 (48%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3939 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPTEA-LATLRPVQLIGGEQTLFAVTADGKL 3994

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   ++ V  + G  H  A+            
Sbjct: 3995 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALS----------- 4043

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    +    +A G + +  +TA+G++F+
Sbjct: 4044 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFT 4102

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  ++    HR I D+ACGS       ++    V++WG G 
Sbjct: 4103 WGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI-DVACGSGDAQTLCLTDDDMVWSWGDGD 4161

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4162 YGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVAL 4200



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 22/171 (12%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ +V +T
Sbjct: 610 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLVEKLQDLDIVKVCCGSQFSVALT 659

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ+++WG+G   +LGHG +  V +PKL+D L G  +  VA G  H  A+T  G++++W
Sbjct: 660 KDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSW 719

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ-ISSICCGPWHTAAITS 420
           G  D + +   L           +K    + GL+ I  I CGP  + A +S
Sbjct: 720 GSNDKLQHFDTLSN---------KKQPKALPGLKHIVGISCGPGQSFAWSS 761



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 111/222 (50%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3939 SGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQL------------IGGEQTLF 3986

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3987 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 4046

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + DIA G  H A +++  E++TWGKG
Sbjct: 4047 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKG 4106

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++  P LV+AL+  +V  V CGS     +CL
Sbjct: 4107 RYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCL 4148



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 107/214 (50%), Gaps = 20/214 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VL 310
           G+++ WG G   G LG        SS D+   +L   L+   V+D   +ACGS  A  + 
Sbjct: 556 GELYTWGRG-NYGRLGHG------SSEDQTTPMLVTALKGLKVVD---VACGSGDAQTLA 605

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           VT+ GQ++SWG+G  GKLG G       PKL++ L   +I  V CG   + A+T  G +Y
Sbjct: 606 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVY 665

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           TWG G +    LG  ++     P K+   ++G ++  +  G  H  A+T  G++ ++G  
Sbjct: 666 TWGKGDNQ--RLGHGTDEHVRFP-KLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSN 722

Query: 431 TFGALGHGDR-SSTSVPREVETLKELKTVMASCG 463
               L H D  S+   P+ +  LK +  V  SCG
Sbjct: 723 D--KLQHFDTLSNKKQPKALPGLKHI--VGISCG 752


>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
          Length = 3645

 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 228/436 (52%), Gaps = 39/436 (8%)

Query: 207  SLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGL 266
            ++ F+AS   ++ + +++T    R  LS   S+++  +          VF+WG    + L
Sbjct: 1731 TVPFLASDNEEEEDEKTATGSMSRKRLSGLESAATIRT---------KVFVWGLNDKDQL 1781

Query: 267  LGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGG 326
              G + G +I         +P   E+   L+   +A GSK    VT +G++++ GE + G
Sbjct: 1782 --GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYACGEATNG 1831

Query: 327  KLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLG 383
            +LG G+ +  +  P+ I AL+   +  VA   G  H  A+T+ G +++WG+G  + G LG
Sbjct: 1832 RLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEG--DDGKLG 1889

Query: 384  QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
              S ++   PR +   ++  +I  I CG  H+AAITS+G+L+++G G +G LGHGD ++ 
Sbjct: 1890 HFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQ 1948

Query: 444  SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FTWGDGAEGQLGHG 502
              P+ V+ L   + V  +CG            + + +  L+ + + F+WGDG  G+LG G
Sbjct: 1949 LRPKLVKVLLGHRVVQVACG-----------SRDAQTLALTDEGMVFSWGDGDFGKLGRG 1997

Query: 503  DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFP 561
             +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +LG       + P
Sbjct: 1998 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKP 2057

Query: 562  TRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALR 621
              +EG ++ + I  +A G+ H   V+   +V+ WG   +GQ G+G     + PTLV+ L 
Sbjct: 2058 QMVEG-LRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQGLE 2116

Query: 622  DKQVKSVVCGSNFTAA 637
             +++  V CGS+ + A
Sbjct: 2117 GQKITRVACGSSHSVA 2132



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 195/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 2761 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPTEALATLRPVQLIGGEQTLFA 2810

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 2811 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGE 2870

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            LY+WG+     G LG  +      PR +   + G+++  I  G  H+A IT++G+L+T+G
Sbjct: 2871 LYSWGEA--EDGKLGHGNRSPCDRPRVIES-LRGVEVVDIAAGGAHSACITASGELYTWG 2927

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGHGD      P+ VE L+  + +  +CG          +G            +
Sbjct: 2928 KGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACG----------SGDAQTLCLTDDDMV 2977

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 2978 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 3037

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 3038 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 3095

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K++  V CGS  T A
Sbjct: 3096 TTNAIQRPRLVAALQGKKINRVACGSAHTLA 3126



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/340 (32%), Positives = 168/340 (49%), Gaps = 36/340 (10%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT  G +Y 
Sbjct: 1765 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVYA 1824

Query: 372  WGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
             G+  +    LG          Q+S +S+++ +KV+          +  G  H  A+T  
Sbjct: 1825 CGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVA----------VHSGGRHAMALTVD 1874

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            GK+F++G+G  G LGH  R +   PR +E LK  +    +CG  H+AAI           
Sbjct: 1875 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT---------- 1924

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
              SS +L++WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G 
Sbjct: 1925 --SSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGM 1982

Query: 540  VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            VFS G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG
Sbjct: 1983 VFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 2041

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               +LGHG + + + P +VE LR K++  V  G+    A+
Sbjct: 2042 DYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAV 2081



 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 162/352 (46%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + TA  K Y   E+ +  L    S G      + S   ++ +    AV S  + +   
Sbjct: 1813 LFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVK-KVAVHSGGRHAMAL 1871

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 1872 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 1919

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G+++SWG G  G+LGHG       PKL+  L G  +  VACG  +  T A+T 
Sbjct: 1920 SAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTD 1979

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 1980 EGMVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 2036

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ E             
Sbjct: 2037 TWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETG----------- 2085

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             ++F WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 2086 -QVFAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 2136



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 157/327 (48%), Gaps = 44/327 (13%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G+++ WGE   +G LG        S  DR     P+V+ES   ++   IA G  H+  +T
Sbjct: 2869 GELYSWGEA-EDGKLGHGNR----SPCDR-----PRVIESLRGVEVVDIAAGGAHSACIT 2918

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD--LY 370
              G++++WG+G  G+LGHG   D   PKL++AL G  +  VACG      + L+ D  ++
Sbjct: 2919 ASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTDDDMVW 2978

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+       +P K+   + GL +  + CG   + A+T +G ++T+G G
Sbjct: 2979 SWGDG--DYGKLGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 3035

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +  LGHG       PR+V+ L+  K +  + G  H     E              +++T
Sbjct: 3036 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 3083

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGD  EGQLG G       P  V         +VACG + T+A + +             
Sbjct: 3084 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 3130

Query: 551  LGSPGSTGKFPTRIEGNIKHRYIEDIA 577
               P + GK P ++   +++ ++++IA
Sbjct: 3131 --KPTNAGKLPAQVP--MEYNHLQEIA 3153



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 109/229 (47%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 1762 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 1808

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++++ K++  G+   G+LG G +   + +P  +    +    KVA   G    
Sbjct: 1809 GSKSLFAVTAEGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHA 1868

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            +ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 1869 MALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 1928

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +Y+WG G  G+LGHGDN  +  P LV+ L   +V  V CGS     + L
Sbjct: 1929 LYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLAL 1977



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 134/279 (48%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 2762 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPTEA-LATLRPVQLIGGEQTLFAVTADGKL 2817

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   ++ V  + G  H  A+            
Sbjct: 2818 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALS----------- 2866

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  +L++WG+  +G+LGHG+  P   P  ++    +    +A G + +  +TA+G++++
Sbjct: 2867 -SEGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYT 2925

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR I D+ACGS       ++    V++WG G 
Sbjct: 2926 WGKGRYGRLGHGDSEDQLKPKLVEALQGHRVI-DVACGSGDAQTLCLTDDDMVWSWGDGD 2984

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 2985 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3023



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 111/222 (50%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 2762 SGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQL------------IGGEQTLF 2809

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 2810 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 2869

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +++S G A+ G+LG    +     R+  +++   + DIA G  H A +++  E+YTWGKG
Sbjct: 2870 ELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELYTWGKG 2929

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++  P LVEAL+  +V  V CGS     +CL
Sbjct: 2930 RYGRLGHGDSEDQLKPKLVEALQGHRVIDVACGSGDAQTLCL 2971


>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
          Length = 4835

 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2960 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3009

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3010 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3069

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3070 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3126

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3127 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3175

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3176 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3235

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3236 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTT 3294

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3295 VNRKPTLVQGLEGQKITRVACGSSHSVA 3322



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 192/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3951 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALAALRPVQLIGGEQTLFA 4000

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4001 VTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4060

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G ++  +  G  H+A +T+AG L+T+G
Sbjct: 4061 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGTEVVDVAAGGAHSACVTAAGDLYTWG 4117

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 4118 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG----------SGDAQTLCLTDDDTV 4167

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4168 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4227

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    S   EVYTWG    GQLG G
Sbjct: 4228 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDG 4285

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4286 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4316



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2955 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3014

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
             G+  +    LG +S  +  IPR+++     + +  ++  G  H  A+T  GK+F++G+G
Sbjct: 3015 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3073

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 3074 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 3121

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
            WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 3122 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3181

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 3182 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3240

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 3241 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3271



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 174/355 (49%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 492

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 611 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   ++ALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 717

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P+ +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 770



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 161/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 470 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 529

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 530 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 587

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 588 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 647 KTPKLIEKLQDLDVVKVRCGSQFSVALTK------------DGQVYSWGKGDNQRLGHGT 694

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P+
Sbjct: 695 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPS 754

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 755 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 782



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 161/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3003 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3061

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3062 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3109

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3110 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3169

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3170 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3226

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +             
Sbjct: 3227 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAG----------- 3275

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 3276 -QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3324



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---- 475

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
                   Q        P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 476 --------QAYNSDTLAPQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 527 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 578 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 638 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEE 696

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 555

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 556 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 612

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 669

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 670 SVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2952 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 2998

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 2999 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3058

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3059 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3118

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3119 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3167



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3952 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LAALRPVQLIGGEQTLFAVTADGKL 4007

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4008 YATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4056

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++         VA G + +  +TA G +++
Sbjct: 4057 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYT 4115

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + D+ACGS       ++    V++WG G 
Sbjct: 4116 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DVACGSGDAQTLCLTDDDTVWSWGDGD 4174

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4175 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4213



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ +V +T
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSVALT 674

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 735 GSNDQCQHFDTL----RVTKPEPSALPG-LDTKHIVGIACGPAQSFAWSS 779



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3952 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQL------------IGGEQTLF 3999

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 4000 AVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4059

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4060 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKG 4119

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  V CGS     +CL
Sbjct: 4120 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4161



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  I          P+ +E         I CG++ ++ +T
Sbjct: 3171 GLVFSWGDGDFGKLGRGGSEGCNI----------PQNIERLNGQGVCQIECGAQFSLALT 3220

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT +G +Y W
Sbjct: 3221 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3280

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+ 
Sbjct: 3281 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3326


>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 437

 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 119/348 (34%), Positives = 185/348 (53%), Gaps = 19/348 (5%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQ-IFSWGEGSGGKLGHGVE 333
           ++   D  D L P  L +    D   + CG+ H +  ++ G+ ++SWG G  G+LGHG  
Sbjct: 45  QLGHGDTDDRLFPTKLSALDGQDIICVTCGADHTMARSESGRDVYSWGWGDFGRLGHGDH 104

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +D+  P  I AL G  I  +ACG+ H  AVT+   + +WG   +  G LG  +     +P
Sbjct: 105 SDLLIPHPIKALQGLMIQQIACGDSHCLAVTMDSQVLSWGR--NQNGELGLGTAEDSLLP 162

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           +K+    E + I  +  G  H+ AIT  G L+ +G G +G LG GDR+   +P +V T+ 
Sbjct: 163 QKIQ-IFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKV-TVD 220

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
             K  M +CG  HT  +             SS  L+T G G  GQLGHGD E  +VP  V
Sbjct: 221 GDKMAMVACGWRHTICVS------------SSGGLYTNGWGKYGQLGHGDFEDHLVPRKV 268

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH-RY 572
           +   D    +V+ G   ++ALT++GQ+   G   +GQ+G  G+     + ++ N  H + 
Sbjct: 269 QALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGV-GNNFDCCSPMQVNFPHDQK 327

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           ++ I+CG  H   V+ +  VY+WG+GANGQLG+G+  ++  PT++EA 
Sbjct: 328 VQMISCGWRHTIAVTERENVYSWGRGANGQLGNGETIDRNVPTIIEAF 375



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 153/318 (48%), Gaps = 37/318 (11%)

Query: 254 DVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAV 309
           DV+ WG G    LG+G              D  D L+P  +++   L  Q IACG  H +
Sbjct: 87  DVYSWGWGDFGRLGHG--------------DHSDLLIPHPIKALQGLMIQQIACGDSHCL 132

Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
            VT   Q+ SWG    G+LG G   D   P+ I       I MVA G  H+ A+T  G+L
Sbjct: 133 AVTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITKDGNL 192

Query: 370 YTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           Y WG G + NLGL  +   +   +P KV+  ++G +++ + CG  HT  ++S+G L+T G
Sbjct: 193 YGWGWGRYGNLGLGDRNDRL---LPEKVT--VDGDKMAMVACGWRHTICVSSSGGLYTNG 247

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
            G +G LGHGD     VPR+V+ L +      S G  H+ A+             SS +L
Sbjct: 248 WGKYGQLGHGDFEDHLVPRKVQALSDKFISQVSGGWRHSMALT------------SSGQL 295

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
             WG    GQ+G G+      P+ V    D     ++CG   TIA+T    V+S G    
Sbjct: 296 LGWGWNKFGQIGVGNNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTERENVYSWGRGAN 355

Query: 549 GQLGSPGSTGK-FPTRIE 565
           GQLG+  +  +  PT IE
Sbjct: 356 GQLGNGETIDRNVPTIIE 373



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 33/49 (67%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
            Q I+CG +H + VT++  ++SWG G+ G+LG+G   D + P +I+A +
Sbjct: 328 VQMISCGWRHTIAVTERENVYSWGRGANGQLGNGETIDRNVPTIIEAFS 376


>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Ailuropoda melanoleuca]
          Length = 4837

 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2962 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3072 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3177

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3178 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3237

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3238 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTT 3296

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3297 VNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3953 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 4002

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4003 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4062

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4063 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4119

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 4120 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG----------SGDAQTLCLTDDDTV 4169

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4170 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4229

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4230 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4287

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4288 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3016

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
             G+  +    LG +S  +  IPR+++     + +  ++  G  H  A+T  GK+F++G+G
Sbjct: 3017 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 3076 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 3123

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
            WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 3184 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3242

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 173/355 (48%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 492

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 493 SRNIIKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 611 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 717

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 470 NGRVYTQAYNSDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 529

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 530 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 587

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 588 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 647 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 694

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 695 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 754

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 755 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 782



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 161/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3005 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3064 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3111

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3112 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3172 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +             
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAG----------- 3277

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 3278 -QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 163/329 (49%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---- 475

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEG--LQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
                   Q        P+ V G      ++I++   G  H  A+ + G+++++G G  G
Sbjct: 476 --------QAYNSDTLAPQLVQGLASRNIIKIAAHSDGH-HYLALAATGEVYSWGCGDGG 526

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 527 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 578 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 638 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 696

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 555

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 556 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 612

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 669

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 3000

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 3001 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3060

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3120

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3954 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4009

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4010 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4058

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4059 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4117

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + D+ACGS       ++    V++WG G 
Sbjct: 4118 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DVACGSGDAQTLCLTDDDTVWSWGDGD 4176

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4177 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4215



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 674

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 735 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 779



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 4001

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 4002 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4121

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  V CGS     +CL
Sbjct: 4122 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4163



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  I          P+ +E         I CG++ ++ +T
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNI----------PQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT +G +Y W
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+ 
Sbjct: 3283 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3328


>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
 gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
          Length = 4837

 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2962 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3072 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3177

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3178 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3237

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3238 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTT 3296

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3297 VNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 192/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3953 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALAALRPVQLIGGEQTLFA 4002

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4003 VTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4062

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G ++  +  G  H+A +T+AG L+T+G
Sbjct: 4063 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGTEVVDVAAGGAHSACVTAAGDLYTWG 4119

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 4120 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG----------SGDAQTLCLTDDDTV 4169

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4170 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4229

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    S   EVYTWG    GQLG G
Sbjct: 4230 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDG 4287

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4288 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3016

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
             G+  +    LG +S  +  IPR+++     + +  ++  G  H  A+T  GK+F++G+G
Sbjct: 3017 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 3076 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 3123

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
            WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 3184 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3242

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 174/355 (49%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 492

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 611 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   ++ALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 659 DVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 717

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P+ +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 770



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 161/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 470 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 529

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 530 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 587

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 588 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 647 KTPKLIEKLQDLDVVKVRCGSQFSVALTK------------DGQVYSWGKGDNQRLGHGT 694

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P+
Sbjct: 695 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPS 754

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 755 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 782



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 161/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3005 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3064 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3111

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3112 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3172 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +             
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAG----------- 3277

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 3278 -QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---- 475

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
                   Q        P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 476 --------QAYNSDTLAPQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 527 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 578 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 638 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEE 696

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 555

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 556 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 612

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 669

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 670 SVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 3000

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 3001 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3060

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3120

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3954 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LAALRPVQLIGGEQTLFAVTADGKL 4009

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4010 YATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4058

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++         VA G + +  +TA G +++
Sbjct: 4059 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYT 4117

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + D+ACGS       ++    V++WG G 
Sbjct: 4118 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DVACGSGDAQTLCLTDDDTVWSWGDGD 4176

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4177 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4215



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ +V +T
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSVALT 674

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 735 GSNDQCQHFDTL----RVTKPEPSALPG-LDTKHIVGIACGPAQSFAWSS 779



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQL------------IGGEQTLF 4001

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 4002 AVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTWGKG 4121

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  V CGS     +CL
Sbjct: 4122 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4163



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  I          P+ +E         I CG++ ++ +T
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNI----------PQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT +G +Y W
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+ 
Sbjct: 3283 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3328


>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
            catus]
          Length = 4837

 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2962 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3012 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3072 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3177

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3178 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3237

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3238 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTT 3296

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3297 VNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 192/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3953 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 4002

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4003 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4062

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4063 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4119

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+    V  +CG          +G            +
Sbjct: 4120 KGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACG----------SGDAQTLCLTDDDTV 4169

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4170 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4229

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4230 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4287

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4288 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3016

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
             G+  +    LG +S  +  IPR+++     + +  ++  G  H  A+T  GK+F++G+G
Sbjct: 3017 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3075

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 3076 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 3123

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
            WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 3124 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3183

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 3184 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3242

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 173/355 (48%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 492

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVA 610

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 611 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 717

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 470 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 529

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 530 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 587

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 588 SSEDEAIPVLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 647 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 694

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 695 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 754

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 755 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 782



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 161/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3005 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3064 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3111

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3112 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3172 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +             
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAG----------- 3277

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 3278 -QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---- 475

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
                   Q        P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 476 --------QAYNSDTLAPQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 527 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 578 RGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 638 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 696

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 555

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 556 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKGLKVIDVACG 612

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 669

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 3000

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 3001 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3060

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3120

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 132/278 (47%), Gaps = 21/278 (7%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3954 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4009

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4010 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4058

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4059 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4117

Query: 543  MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGAN 600
             G   YG+LG   S  +   ++   ++  ++ D+ACGS       ++    V++WG G  
Sbjct: 4118 WGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWGDGDY 4177

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4178 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4215



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 674

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 735 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 779



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 109/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 4001

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 4002 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4121

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+   V  V CGS     +CL
Sbjct: 4122 RYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCL 4163



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  I          P+ +E         I CG++ ++ +T
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNI----------PQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT +G +Y W
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+ 
Sbjct: 3283 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3328


>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Gorilla gorilla gorilla]
          Length = 4586

 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2713 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2762

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 2763 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2822

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 2823 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2879

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 2880 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 2928

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 2929 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 2988

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 2989 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3047

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3048 VNRKPTLVQGLEGQKITRVACGSSHSVA 3075



 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 194/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +  + 
Sbjct: 3702 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLLA 3751

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 3752 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 3811

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 3812 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 3868

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 3869 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG----------SGDAQTLCLTDDDTV 3918

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 3919 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 3978

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 3979 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4036

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4037 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4067



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2708 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 2767

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
             G+  +    LG +S  +  IPR+++     + +  ++  G  H  A+T  GK+F++G+G
Sbjct: 2768 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 2826

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 2827 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 2874

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
            WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 2875 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 2934

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 2935 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 2993

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 2994 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3024



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 171/352 (48%), Gaps = 37/352 (10%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
           L    IAC  K  ++V + G++ +              +D   P+L+  L   N+  +A 
Sbjct: 428 LGVTQIACAEKRLLIVXRNGRVXT----------QAYNSDTLVPQLVQGLASRNVVKIAA 477

Query: 356 GE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQMEGLQISSICC 410
                H  A+  +G++Y+WG G  +   LG    +    P+ +S   G+  G  +  I C
Sbjct: 478 HSDGHHYLALAATGEVYSWGCG--DGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIAC 535

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV--WHTA 468
           G  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +CG     T 
Sbjct: 536 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 595

Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH 528
           A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+   KV CG 
Sbjct: 596 AVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGS 643

Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
             +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A GS H   ++
Sbjct: 644 QFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAAGSTHCLALT 702

Query: 588 SKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             SEV++W  G+N Q  H D     K  P  +  L  K +  + CG   ++A
Sbjct: 703 EDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSSA 752



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 163/336 (48%), Gaps = 28/336 (8%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L+P++++     +   IA  S   H + +   G+++SWG G G +LG
Sbjct: 446 NGRVXTQAYNSDTLVPQLVQGLASRNVVKIAAHSDGHHYLALAATGEVYSWGCGDGRRLG 505

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 506 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 563

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 564 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 622

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 623 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 670

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 671 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 730

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            + G +  ++I  IACG    A  S+ S  Y W  G
Sbjct: 731 ALPG-LDTKHIVGIACGP---AQSSAGSSXYEWSMG 762



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 162/352 (46%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 2756 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 2814

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 2815 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 2862

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 2863 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 2922

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 2923 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 2979

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 2980 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3027

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3028 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3079



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 127/229 (55%), Gaps = 14/229 (6%)

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           H  A+ + G+++++G G    LGHGD    +VP     L+E K + A  G      +V +
Sbjct: 483 HYLALAATGEVYSWGCGDGRRLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHI 533

Query: 474 AGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSI 530
           A  ++ S  ++++ +L+TWG G  G+LGHG +E   +P+ V     +    VACG   + 
Sbjct: 534 ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 593

Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
           T+A+T  GQV+S G  DYG+LG  GS G K P  IE  ++   +  + CGS     ++  
Sbjct: 594 TLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKD 652

Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            +VY+WGKG N +LGHG  E+ + P L+E L+ K+V  V  GS    A+
Sbjct: 653 GQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 701



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 475 IAAHSDGHHYLALAATGEVYSWGCGDGRRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 531

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 532 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 588

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 589 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 645

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 646 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 703



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2705 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 2751

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 2752 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 2811

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 2812 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 2871

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 2872 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 2920



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3703 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLLAVTADGKL 3758

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 3759 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 3807

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 3808 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 3866

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + DIACGS       ++    V++WG G 
Sbjct: 3867 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDAQTLCLTDDDTVWSWGDGD 3925

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 3926 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3964



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 20/194 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 601 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 650

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 651 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 710

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           G  D   +   L     ++   P  + G ++   I  I CGP  ++A +S    + +  G
Sbjct: 711 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSSAGSSX---YEWSMG 762

Query: 431 TFGALGHGDRSSTS 444
                G   RS+TS
Sbjct: 763 LCVPQGGDIRSTTS 776



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3703 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLL 3750

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3751 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3810

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 3811 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3870

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 3871 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 3912


>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
            mulatta]
          Length = 4840

 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2961 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3071 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3176

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3177 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3236

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3237 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3295

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3296 VNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3981 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 4030

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4031 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4090

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4091 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4147

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 4148 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG----------SGDAQTLCLTDDDTV 4197

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4198 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4257

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4258 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4315

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4316 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4346



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2956 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3015

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
             G+  +    LG +S  +  IPR+++     + +  ++  G  H  A+T  GK+F++G+G
Sbjct: 3016 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 3075 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 3122

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
            WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 3183 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3241

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 173/355 (48%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 610 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 716

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 469 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 528

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 529 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 586

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 587 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 693

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 753

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 754 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 781



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 162/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3004 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3063 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3110

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3111 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3170

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3171 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3275

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 3276 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---- 474

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
                   Q        P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 475 --------QAYNSDTLAPQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 526 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 577 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 637 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 695

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 554

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 555 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 668

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 2999

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 3000 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3059

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3119

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3982 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4037

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4038 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4086

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4087 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4145

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + DIACGS       ++    V++WG G 
Sbjct: 4146 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDAQTLCLTDDDTVWSWGDGD 4204

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4205 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4243



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 734 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 778



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  I          P+ +E         I CG++ ++ +T
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNI----------PQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT SG +Y W
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+ 
Sbjct: 3282 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3327



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3982 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 4029

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 4030 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4089

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4090 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4149

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4150 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4191


>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
            boliviensis]
          Length = 4472

 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2599 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2648

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 2649 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFS 2708

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 2709 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 2765

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 2766 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 2814

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   VP  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 2815 WGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 2874

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 2875 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 2933

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 2934 VNRKPTLVQGLEGQKITRVACGSSHSVA 2961



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 192/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3588 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 3637

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 3638 VTADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 3697

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  S      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 3698 VYSWGEA--EDGKLGHGSRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 3754

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 3755 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG----------SGDAQTLCLTDDDTV 3804

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP  +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 3805 WSWGDGDYGKLGRGGSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 3864

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 3865 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 3922

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 3923 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3953



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 168/332 (50%), Gaps = 20/332 (6%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2594 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 2653

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC--GPWHTAAITSAGKLFTFGD 429
             G+  +    LG +S  +  IPR+++  +    +  +    G  H  A+T  GK+F++G+
Sbjct: 2654 CGEATNGRLGLG-LSSGTVPIPRQITA-LSSYMVKKVAVHSGGRHATALTVDGKVFSWGE 2711

Query: 430  GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
            G  G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+
Sbjct: 2712 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELY 2759

Query: 490  TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSAD 547
            TWG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D
Sbjct: 2760 TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 2819

Query: 548  YGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            +G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG
Sbjct: 2820 FGKLGRGGSEGCNVPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHG 2878

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             + + + P +VE LR K++  V  G+    A+
Sbjct: 2879 SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 2910



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 186/394 (47%), Gaps = 42/394 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 131 PIQCEGLANLGVTQIACAEKRFLILSRSGRVYT----------QAYNSDTLAPQLVQGLA 180

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 181 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKAISAFSGKQA 238

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 239 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 298

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 299 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 346

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 347 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 405

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG--SNF 634
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG   +F
Sbjct: 406 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSF 463

Query: 635 TAAICLHKGVSIADH---SICSGCRNQFNFRRRR 665
             + C    + +       ICS    Q +   R+
Sbjct: 464 AWSSCSEWSIGLRVPFVVDICSMTFEQLDLLLRQ 497



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 155/318 (48%), Gaps = 25/318 (7%)

Query: 283 DALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPK 340
           D L P++++     +   IA  S   H + +   G+++SWG G GG+LGHG    +  PK
Sbjct: 169 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPK 228

Query: 341 LIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV 396
            I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  S     IP  V
Sbjct: 229 AISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHGSSEDEAIPMLV 286

Query: 397 SGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           +G ++GL++  + CG     T A+T  G+++++GDG +G LG G       P+ +E L++
Sbjct: 287 AG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQD 345

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
           L  V   CG   + A+ +              ++++WG G   +LGHG  E    P  ++
Sbjct: 346 LDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 393

Query: 515 VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPTRIEGNIKHRYI 573
                    VA G +  +ALT   +V S GS D  Q   +   T   P  + G +  ++I
Sbjct: 394 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPG-LDTKHI 452

Query: 574 EDIACGSYHIAVVSSKSE 591
             IACG       SS SE
Sbjct: 453 VGIACGPAQSFAWSSCSE 470



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ SG +YT    
Sbjct: 113 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRSGRVYT---- 163

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
                   Q        P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 164 --------QAYNSDTLAPQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 214

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 215 RLGHGD----TVP-----LEEPKAISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 265

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 266 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 325

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 326 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 384

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 385 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 413



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 162/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 2642 LFAVTVEGKVYACGEATNGRLGLGLSSGTVPI-PRQITALSSYMVKKVAVHSGGRHATAL 2700

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 2701 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 2748

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 2749 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 2808

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       +P+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 2809 EGLVFSWGDG--DFGKLGRGGSEGCNVPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 2865

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 2866 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 2913

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 2914 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 2963



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 187 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKAISAFSGKQAGKHVV- 243

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 244 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 300

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 301 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 357

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 358 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 415



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3589 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 3644

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 3645 YATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 3693

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG   P   P  ++    I    VA G + +  +TA G +++
Sbjct: 3694 -SEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 3752

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + DIACGS       ++    V++WG G 
Sbjct: 3753 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDAQTLCLTDDDTVWSWGDGD 3811

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + PT +++L    V  V CGS F+ A+
Sbjct: 3812 YGKLGRGGSDGCKVPTKIDSLTGLGVVKVECGSQFSVAL 3850



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 123/280 (43%), Gaps = 30/280 (10%)

Query: 376  IHNLGLLGQV---SEISHWIPRKVSGQME--------GLQISSICCGPWHTAAITSAGKL 424
            IH L LLG++    E    +P   S   E        G  I     G   TA I +  K+
Sbjct: 2542 IHGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGGSGSLIRKKAAGLESTATIRT--KV 2599

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
            F +G      LG    S   VP   ETL  L              +V+VAG +     ++
Sbjct: 2600 FVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAGGSKSLFAVT 2646

Query: 485  SK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSITIALTATGQV 540
             + K++  G+   G+LG G +   V +P  +         KVA   G     ALT  G+V
Sbjct: 2647 VEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKV 2706

Query: 541  FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
            FS G  D G+LG          R+   +K + I DIACGS H A ++S  E+YTWG G  
Sbjct: 2707 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 2766

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 2767 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 2806



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 313 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 362

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 363 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 422

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 423 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 467



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  +          P+ +E         I CG++ ++ +T
Sbjct: 2810 GLVFSWGDGDFGKLGRGGSEGCNV----------PQNIERLNGQGVCQIECGAQFSLALT 2859

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT SG +Y W
Sbjct: 2860 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 2919

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+ 
Sbjct: 2920 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 2965



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3589 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 3636

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3637 AVTADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3696

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 3697 EVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3756

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 3757 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 3798



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 10/114 (8%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G V+ WG+G  + L  G+ + V      RR    P+ ++        +IA GS H V  T
Sbjct: 3854 GAVYTWGKGDYHRLGHGSDDHV------RR----PRQVQGLQGKKVIAIATGSLHCVCCT 3903

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
            + G++++WG+   G+LG G    +  P+L+ AL G  ++ VACG  HT A + S
Sbjct: 3904 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 3957


>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
          Length = 4833

 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 206/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2964 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3013

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3014 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3073

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   +   +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3074 WGEG--DDGKLGHFSRMNCDKPRLIEA-LRAKRIRDIACGSSHSAALTSSGELYTWGLGE 3130

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3131 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3179

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3180 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3239

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3240 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3298

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3299 VNRKPTLVQGLEGQKITRVACGSSHSVA 3326



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 126/391 (32%), Positives = 194/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3954 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 4003

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4004 VTADGKLYATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGE 4063

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  S      PR V   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4064 VYSWGEA--EDGKLGHGSRSPCDRPRVVE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4120

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 4121 KGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDVACG----------SGDAQTLCLTDDDTV 4170

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ ++    +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4171 WSWGDGDYGKLGRGGSDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4230

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4231 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4288

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4289 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4319



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 166/336 (49%), Gaps = 36/336 (10%)

Query: 316  QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
            ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y  G+ 
Sbjct: 2963 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEA 3022

Query: 376  IHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             +    LG          Q++ +S ++ +KV+          +  G  H  A+T  GK+F
Sbjct: 3023 TNGRLGLGLSSGTVPIPRQITALSSYVVKKVA----------VHSGGRHATALTVDGKVF 3072

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            ++G+G  G LGH  R +   PR +E L+  +    +CG  H+AA+             SS
Sbjct: 3073 SWGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALT------------SS 3120

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSM 543
             +L+TWG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS 
Sbjct: 3121 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSW 3180

Query: 544  GSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
            G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +
Sbjct: 3181 GDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3239

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LGHG + + + P +VE LR K++  V  G+    A+
Sbjct: 3240 LGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3275



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 172/355 (48%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 492

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++++WG G  + G LG    +    P+ +S   G+  
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVFSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQG 550

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 611 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   ++ALT  GQV+S G  D  +LG       ++P  +EG +  + + D+A 
Sbjct: 659 EVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEG-LHGKKVIDVAA 717

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 162/352 (46%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3007 LFAVTVEGKVYACGEATNGRLGLGLSSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3065

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3066 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALRAKRIRDIACGSSH 3113

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3114 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3173

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3174 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3230

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 3231 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3278

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3279 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3330



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 159/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---- 475

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
                   Q        P+ V G +    I  I       H  A+ + G++F++G G  G
Sbjct: 476 --------QAYNSDTLAPQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGG 526

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 527 RLGHGD----TVP-----LEEPKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWG 577

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 578 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 638 LGRGGSDGCKTPKLIE-KLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEE 696

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L  K+V  V  GS    A+
Sbjct: 697 HVRYPRLLEGLHGKKVIDVAAGSTHCLAL 725



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+VF WG G G  L  G  + V +       A   K     VV 
Sbjct: 499 IAAHSDGHHYLALAATGEVFSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQGGKHVV- 555

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 556 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 612

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L++  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLEVVKVRCGSQF 669

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       PR +E L   K +  + G  H  A+ E
Sbjct: 670 SVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTE 727



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 103/222 (46%), Gaps = 17/222 (7%)

Query: 423  KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            K+F +G      LG    S   VP   ETL  L              +V+VAG +     
Sbjct: 2963 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAGGSKSLFA 3009

Query: 483  LSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSITIALTATG 538
            ++ + K++  G+   G+LG G +   V +P  +         KVA   G     ALT  G
Sbjct: 3010 VTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDG 3069

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +VFS G  D G+LG          R+   ++ + I DIACGS H A ++S  E+YTWG G
Sbjct: 3070 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLG 3129

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3130 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3171



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 131/279 (46%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3955 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4010

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   ++ V  + G  H  A+            
Sbjct: 4011 YATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALS----------- 4059

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG   P   P  V+    I    VA G + +  +TA G +++
Sbjct: 4060 -SEGEVYSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYT 4118

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + D+ACGS       ++    V++WG G 
Sbjct: 4119 WGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVV-DVACGSGDAQTLCLTDDDTVWSWGDGD 4177

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +E+L    V  V CGS F+ A+
Sbjct: 4178 YGKLGRGGSDGCKVPMKIESLTGLGVVKVECGSQFSVAL 4216



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 109/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3955 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 4002

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 4003 AVTADGKLYATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 4062

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4063 EVYSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4122

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVE L+  +V  V CGS     +CL
Sbjct: 4123 RYGRLGHSDSEDQLKPKLVEVLQGHRVVDVACGSGDAQTLCL 4164



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 87/170 (51%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    L+   + CGS+ +V +T
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLEVVKVRCGSQFSVALT 674

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YP+L++ L+G  +  VA G  H  A+T   ++++W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 735 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 779


>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4834

 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2961 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3071 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3176

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3177 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3236

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3237 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3295

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3296 VNRKPTLVQGLEGQKITRVACGSSHSVA 3323



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3950 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 3999

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4000 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4059

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4060 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4116

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG----------SGDAQTLCLTDDDTV 4166

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4167 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4227 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4285 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2956 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3015

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
             G+  +    LG +S  +  IPR+++     + +  ++  G  H  A+T  GK+F++G+G
Sbjct: 3016 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 3075 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 3122

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
            WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 3183 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3241

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 173/355 (48%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 610 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 716

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 469 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 528

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 529 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 586

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 587 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 693

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 753

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 754 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 781



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 162/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3004 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3062

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3063 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3110

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3111 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3170

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3171 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3227

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3275

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 3276 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3325



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
              L             P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 479 SDTLA------------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 526 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 577 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 637 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 695

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 554

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 555 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 668

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 2999

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 3000 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3059

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3119

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3951 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4006

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4007 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4055

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4056 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4114

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + DIACGS       ++    V++WG G 
Sbjct: 4115 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDAQTLCLTDDDTVWSWGDGD 4173

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 734 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 778



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  I          P+ +E         I CG++ ++ +T
Sbjct: 3172 GLVFSWGDGDFGKLGRGGSEGCNI----------PQNIERLNGQGVCQIECGAQFSLALT 3221

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT SG +Y W
Sbjct: 3222 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3281

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+ 
Sbjct: 3282 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3327



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 3998

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3999 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160


>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4829

 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2956 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3005

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3006 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3065

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3066 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3122

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3123 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3171

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3172 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3231

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3232 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3290

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3291 VNRKPTLVQGLEGQKITRVACGSSHSVA 3318



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3945 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 3994

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 3995 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4054

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4055 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4111

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 4112 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG----------SGDAQTLCLTDDDTV 4161

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4162 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4221

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4222 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4279

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4280 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4310



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2951 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3010

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
             G+  +    LG +S  +  IPR+++     + +  ++  G  H  A+T  GK+F++G+G
Sbjct: 3011 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3069

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 3070 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 3117

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
            WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 3118 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3177

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 3178 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3236

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 3237 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3267



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 173/355 (48%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 610 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 716

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 469 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 528

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 529 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 586

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 587 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 693

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 753

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 754 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 781



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 162/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 2999 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3057

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3058 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3105

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3106 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3165

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3166 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3222

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 3223 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3270

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 3271 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3320



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---- 474

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
                   Q        P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 475 --------QAYNSDTLAPQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 526 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 577 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 637 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 695

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 554

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 555 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 668

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2948 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 2994

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 2995 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3054

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3055 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3114

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3115 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3163



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3946 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4001

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4002 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4050

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4051 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4109

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + DIACGS       ++    V++WG G 
Sbjct: 4110 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDAQTLCLTDDDTVWSWGDGD 4168

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4169 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4207



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 734 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 778



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  I          P+ +E         I CG++ ++ +T
Sbjct: 3167 GLVFSWGDGDFGKLGRGGSEGCNI----------PQNIERLNGQGVCQIECGAQFSLALT 3216

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT SG +Y W
Sbjct: 3217 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3276

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+ 
Sbjct: 3277 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 3322



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3946 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 3993

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3994 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4053

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4054 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4113

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4114 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4155


>gi|195999218|ref|XP_002109477.1| hypothetical protein TRIADDRAFT_21647 [Trichoplax adhaerens]
 gi|190587601|gb|EDV27643.1| hypothetical protein TRIADDRAFT_21647, partial [Trichoplax
           adhaerens]
          Length = 330

 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/332 (34%), Positives = 179/332 (53%), Gaps = 26/332 (7%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTL-SGDLYTWGDG 375
           +++WG G  G LGHG + D+  P++++AL   NI  +ACG     A+    G +Y+WG G
Sbjct: 1   VYTWGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLACGLHTVFALNAEDGKVYSWGLG 60

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA---GKLFTFGDGTF 432
            +  G+LGQ +  S + P K++   +   +  I C   H AA+TS    G +++FGD + 
Sbjct: 61  KY--GILGQGNLRSRFAPLKIA-SFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSN 117

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTW 491
             LG GD    + P+ V  L +   +  +CG +H+AA             LS+K  LF W
Sbjct: 118 SQLGVGDTEPYAEPQLVTVLNDENIIKVACGKYHSAA-------------LSAKGNLFLW 164

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDIS-FCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G G +GQLG G+      P  + + +  +    VACG   T  LT  G V++ GS  YGQ
Sbjct: 165 GLGDDGQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTCILTVGGLVYAFGSNIYGQ 224

Query: 551 LGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           + +P S  KF  P RI  N   R++  ++CGS+H A ++   ++Y WG   +G+LG GD 
Sbjct: 225 IAAP-SMNKFHLPYRISFNTSKRFVS-VSCGSFHSAAITENGKLYAWGLETDGRLGLGDC 282

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           + + +PT VE  RDK++  + CGS  TAA+ +
Sbjct: 283 KQRSSPTEVEGFRDKKIGRIACGSKHTAALII 314



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 132/290 (45%), Gaps = 37/290 (12%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG G   G+LG           + R    P  + S    +   I+C   HA  VT
Sbjct: 52  GKVYSWGLG-KYGILG---------QGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVT 101

Query: 313 ---KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
                G ++S+G+ S  +LG G     + P+L+  LN  NI  VACG++H+ A++  G+L
Sbjct: 102 SVTNTGSVYSFGDNSNSQLGVGDTEPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNL 161

Query: 370 YTWG---DGIHNLGLLGQVSE--ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
           + WG   DG   LG     +E  I H   +K        ++  + CG  HT  +T  G +
Sbjct: 162 FLWGLGDDGQLGLGNYNLSTEPTILHIGEKKA-------KVMDVACGDLHTCILTVGGLV 214

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           + FG   +G +     +   +P  +      + V  SCG +H+AAI E        NG  
Sbjct: 215 YAFGSNIYGQIAAPSMNKFHLPYRISFNTSKRFVSVSCGSFHSAAITE--------NG-- 264

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
             KL+ WG   +G+LG GD + R  P  V+   D    ++ACG   T AL
Sbjct: 265 --KLYAWGLETDGRLGLGDCKQRSSPTEVEGFRDKKIGRIACGSKHTAAL 312



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 164/339 (48%), Gaps = 34/339 (10%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAV--LVT 312
           V+ WG G+ NG LG   +G +I      D   P+V+E+ +  + + +ACG  H V  L  
Sbjct: 1   VYTWGSGI-NGALG---HGEDI------DIPSPRVVEALLAYNIKRLACG-LHTVFALNA 49

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTL---SGDL 369
           + G+++SWG G  G LG G       P  I +   SN+  ++C E H  AVT    +G +
Sbjct: 50  EDGKVYSWGLGKYGILGQGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSV 109

Query: 370 YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
           Y++GD  ++   +G     +   P+ V+  +    I  + CG +H+AA+++ G LF +G 
Sbjct: 110 YSFGDNSNSQLGVGDTEPYAE--PQLVT-VLNDENIIKVACGKYHSAALSAKGNLFLWGL 166

Query: 430 GTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           G  G LG G+ + ++ P  +   ++   VM  +CG  HT  I+ V G            +
Sbjct: 167 GDDGQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHT-CILTVGG-----------LV 214

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           + +G    GQ+         +P  +  +    F  V+CG   + A+T  G++++ G    
Sbjct: 215 YAFGSNIYGQIAAPSMNKFHLPYRISFNTSKRFVSVSCGSFHSAAITENGKLYAWGLETD 274

Query: 549 GQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVV 586
           G+LG      +  PT +EG  + + I  IACGS H A +
Sbjct: 275 GRLGLGDCKQRSSPTEVEG-FRDKKIGRIACGSKHTAAL 312



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 37/73 (50%)

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSI 651
           VYTWG G NG LGHG++ +  +P +VEAL    +K + CG +   A+    G   +    
Sbjct: 1   VYTWGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLACGLHTVFALNAEDGKVYSWGLG 60

Query: 652 CSGCRNQFNFRRR 664
             G   Q N R R
Sbjct: 61  KYGILGQGNLRSR 73



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 38/66 (57%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           S++CGS H+  +T+ G++++WG  + G+LG G     S P  ++      I  +ACG  H
Sbjct: 249 SVSCGSFHSAAITENGKLYAWGLETDGRLGLGDCKQRSSPTEVEGFRDKKIGRIACGSKH 308

Query: 360 TCAVTL 365
           T A+ +
Sbjct: 309 TAALII 314


>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
          Length = 4777

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/387 (31%), Positives = 204/387 (52%), Gaps = 28/387 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2923 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2972

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G+I++ GE + G+LG G+ +  +  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 2973 GKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3032

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AAITS+G+L+++G G 
Sbjct: 3033 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGLGE 3089

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3090 YGRLGHGDNTTQLRPKLVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3138

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3139 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3198

Query: 551  LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            LG          +I   ++ + I  +A G+ H   V+   +VY WG   +GQ G+G    
Sbjct: 3199 LGHGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTV 3258

Query: 611  KQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + PTLV+ L  +++  V CGS+ + A
Sbjct: 3259 NRKPTLVQGLEGQKITRVACGSSHSVA 3285



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 195/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3893 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPTEALATLRPVQLIGGEQTLFA 3942

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 3943 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4002

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  I  G  H+A IT++G+LFT+G
Sbjct: 4003 VYSWGEA--EDGKLGHGNRSPCDRPRVIES-LRGVEVVDIAAGGAHSACITASGELFTWG 4059

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGHGD      P+ V+ L+  + +  +CG          +G            +
Sbjct: 4060 KGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACG----------SGDAQTLCLTDDDMV 4109

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4110 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4169

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4170 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4227

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K++  V CGS  T A
Sbjct: 4228 TTNAIQRPRLVAALQGKKINRVACGSAHTLA 4258



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 167/336 (49%), Gaps = 36/336 (10%)

Query: 316  QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
            ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y  G+ 
Sbjct: 2922 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYACGEA 2981

Query: 376  IHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             +    LG          Q+S +S+++ +KV+          +  G  H  A+T  GK+F
Sbjct: 2982 TNGRLGLGLSSGTIQIPRQISALSNYVVKKVA----------VHSGGRHAMALTVDGKVF 3031

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            ++G+G  G LGH  R +   PR +E LK  +    +CG  H+AAI             SS
Sbjct: 3032 SWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT------------SS 3079

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSM 543
             +L++WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS 
Sbjct: 3080 GELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSW 3139

Query: 544  GSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
            G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +
Sbjct: 3140 GDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3198

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LGHG + + + P +VE LR K++  V  G+    A+
Sbjct: 3199 LGHGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAV 3234



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 149/320 (46%), Gaps = 42/320 (13%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G+V+ WGE   +G LG        S  DR     P+V+ES   ++   IA G  H+  +T
Sbjct: 4001 GEVYSWGEA-EDGKLGHGNR----SPCDR-----PRVIESLRGVEVVDIAAGGAHSACIT 4050

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD--LY 370
              G++F+WG+G  G+LGHG   D   PKL+DAL G  +  VACG      + L+ D  ++
Sbjct: 4051 ASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVW 4110

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+       +P K+   + GL +  + CG   + A+T +G ++T+G G
Sbjct: 4111 SWGDG--DYGKLGRGGSDGCKVPMKIDS-LTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4167

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +  LGHG       PR+V+ L+  K +  + G  H     E              +++T
Sbjct: 4168 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4215

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGD  EGQLG G       P  V         +VACG + T+A + +             
Sbjct: 4216 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 4262

Query: 551  LGSPGSTGKFPTRIEGNIKH 570
               P + GK P ++     H
Sbjct: 4263 --KPTNAGKMPAQVPMEYNH 4280



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 172/354 (48%), Gaps = 40/354 (11%)

Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
           K L ST V     I C  K  +++++ G +++             ++    P LI  L+ 
Sbjct: 397 KALSSTGV---TQIVCSEKVFLILSRSGAVYT----------QNYKSTTLAPMLIHGLSS 443

Query: 348 SNIHMVAC---GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV---SGQME 401
             I  +A    G+ H  A++ SG++Y+WG G  + G LG         P  +   SG+  
Sbjct: 444 RKIVKLAAHPDGQ-HFLALSTSGEVYSWGCG--DGGRLGHGDATYLEEPALITTFSGKQT 500

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G Q+  I CG  ++AA+T+ G+L+T+G G +G LGHG     + P  V  LK  K V  +
Sbjct: 501 GKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVA 560

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  V+   D+
Sbjct: 561 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDL 608

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
              KV CG   ++ALT  GQV++ G  D  +LG          ++  +++ + + DIA G
Sbjct: 609 DIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVG 668

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           S H   ++ + EV++W  G+N +L H D    NK+ P  +  L  K +  + CG
Sbjct: 669 STHCLALTDEGEVHSW--GSNDKLQHFDTLFPNKKQPKALPGLNSKHIVGISCG 720



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 163/332 (49%), Gaps = 40/332 (12%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++ +WG      LG  + A+V  P    AL+ + +  + C E     ++ SG +YT    
Sbjct: 375 EVIAWG-----LLGWKLYANVCGPIHCKALSSTGVTQIVCSEKVFLILSRSGAVYT---- 425

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
                   Q  + +   P  + G +   +I  +   P   H  A++++G+++++G G  G
Sbjct: 426 --------QNYKSTTLAPMLIHG-LSSRKIVKLAAHPDGQHFLALSTSGEVYSWGCGDGG 476

Query: 434 ALGHGDRSSTSVPREVETLKELKT----VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
            LGHGD +    P  + T    +T    V  +CG  ++AA+             +  +L+
Sbjct: 477 RLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYSAAVT------------ADGELY 524

Query: 490 TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSAD 547
           TWG G  G+LGHG +E    P+ V          VACG   + T+A+T  GQV+S G  D
Sbjct: 525 TWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGD 584

Query: 548 YGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
           YG+LG  GS G K P  +E  ++   I  + CGS     ++   +VYTWGKG N +LGHG
Sbjct: 585 YGKLGRGGSDGCKTPKLVE-KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHG 643

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            +E+ + P L+++L+ K+V  +  GS    A+
Sbjct: 644 TDEHVRYPKLLDSLQGKKVVDIAVGSTHCLAL 675



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 162/352 (46%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      + S   ++ +    AV S  + +   
Sbjct: 2966 LFAVTVEGKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVK-KVAVHSGGRHAMAL 3024

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3025 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3072

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G+++SWG G  G+LGHG       PKL+  L G  +  VACG  +  T A+T 
Sbjct: 3073 SAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTD 3132

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3133 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3189

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 3190 TWGKGDYFRLGHGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTD------------S 3237

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3238 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3289



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 115/222 (51%), Gaps = 11/222 (4%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+V+ WG G G  L  G    +E        AL+              IACGS ++  VT
Sbjct: 465 GEVYSWGCGDGGRLGHGDATYLE------EPALITTFSGKQTGKQVVQIACGSTYSAAVT 518

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
             G++++WG G+ G+LGHG   DV+ P L+ AL G  +  VACG  +  T AVT +G ++
Sbjct: 519 ADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVW 578

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG+        P+ V  +++ L I  +CCG   + A+T  G+++T+G G
Sbjct: 579 SWGDG--DYGKLGRGGSDGCKTPKLVE-KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKG 635

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
               LGHG       P+ +++L+  K V  + G  H  A+ +
Sbjct: 636 DNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTD 677



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 105/222 (47%), Gaps = 17/222 (7%)

Query: 423  KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            K+F +G      LG    S   VP   ETL  L              +V+VAG +     
Sbjct: 2922 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAGGSKSLFA 2968

Query: 483  LSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSITIALTATG 538
            ++ + K++  G+   G+LG G +   + +P  +    +    KVA   G    +ALT  G
Sbjct: 2969 VTVEGKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDG 3028

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E+Y+WG G
Sbjct: 3029 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLG 3088

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGDN  +  P LV+ L   +V  V CGS     + L
Sbjct: 3089 EYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLAL 3130



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 134/279 (48%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3894 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPTEA-LATLRPVQLIGGEQTLFAVTADGKL 3949

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 3950 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 3998

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    +    +A G + +  +TA+G++F+
Sbjct: 3999 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFT 4057

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  ++    HR I D+ACGS       ++    V++WG G 
Sbjct: 4058 WGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI-DVACGSGDAQTLCLTDDDMVWSWGDGD 4116

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4117 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4155



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 22/182 (12%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ +V +T
Sbjct: 575 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLVEKLQDLDIVKVCCGSQFSVALT 624

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ+++WG+G   +LGHG +  V YPKL+D+L G  +  +A G  H  A+T  G++++W
Sbjct: 625 KDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLALTDEGEVHSW 684

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP-----WHTAAITSAGKLF 425
           G  D + +   L    +     P+ + G +    I  I CGP     W + +  S G+  
Sbjct: 685 GSNDKLQHFDTLFPNKK----QPKALPG-LNSKHIVGISCGPGQSFAWSSCSEWSVGQRV 739

Query: 426 TF 427
            F
Sbjct: 740 PF 741



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 111/222 (50%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3894 SGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQL------------IGGEQTLF 3941

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3942 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4001

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + DIA G  H A +++  E++TWGKG
Sbjct: 4002 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKG 4061

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++  P LV+AL+  +V  V CGS     +CL
Sbjct: 4062 RYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCL 4103


>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
            familiaris]
          Length = 4837

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2962 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3012 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3072 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3177

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3178 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3237

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3238 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTT 3296

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3297 VNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3953 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 4002

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4003 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4062

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4063 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4119

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 4120 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG----------SGDAQTLCLTDDDTV 4169

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4170 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4229

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4230 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4287

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4288 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4318



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 168/340 (49%), Gaps = 36/340 (10%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3016

Query: 372  WGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
             G+  +    LG          Q++ +S ++ +KV+          +  G  H  A+T  
Sbjct: 3017 CGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVA----------VHSGGRHATALTVD 3066

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            GK+F++G+G  G LGH  R +   PR +E LK  +    +CG  H+AA+           
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT---------- 3116

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
              SS +L+TWG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G 
Sbjct: 3117 --SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 540  VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            VFS G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               +LGHG + + + P +VE LR K++  V  G+    A+
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 173/355 (48%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 492

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 611 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 717

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 770



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 470 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 529

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 530 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 587

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 588 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 647 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 694

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 695 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 754

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 755 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 782



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 161/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3005 LFAVTVEGKVYACGEATNGRLGLGLSSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3064 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3111

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3112 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3172 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +             
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAG----------- 3277

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 3278 -QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3326



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---- 475

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
                   Q        P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 476 --------QAYNSDTLAPQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 527 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 578 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 638 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 696

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 555

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 556 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 612

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 669

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 3000

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 3001 GSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3060

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3120

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3954 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4009

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4010 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4058

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4059 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4117

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + D+ACGS       ++    V++WG G 
Sbjct: 4118 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DVACGSGDAQTLCLTDDDTVWSWGDGD 4176

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4177 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4215



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 674

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 735 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 779



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3954 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 4001

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 4002 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4121

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  V CGS     +CL
Sbjct: 4122 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4163



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 84/168 (50%), Gaps = 13/168 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  I          P+ +E         I CG++ ++ +T
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNI----------PQNIERLNGQGVCQIECGAQFSLALT 3222

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT +G +Y W
Sbjct: 3223 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 3282

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+
Sbjct: 3283 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3327


>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 554 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 603

Query: 315 GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
           G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 604 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 663

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 664 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 720

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
           +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 721 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 769

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 770 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 829

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 830 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 888

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + PTLV+ L  +++  V CGS+ + A
Sbjct: 889 VNRKPTLVQGLEGQKITRVACGSSHSVA 916



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 1543 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 1592

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 1593 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 1652

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 1653 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 1709

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 1710 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG----------SGDAQTLCLTDDDTV 1759

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 1760 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 1819

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 1820 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 1877

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 1878 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 1908



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 549 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 608

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
            G+  +    LG +S  +  IPR+++     + +  ++  G  H  A+T  GK+F++G+G
Sbjct: 609 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 667

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 668 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 715

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
           WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 716 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 775

Query: 549 GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
           G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG 
Sbjct: 776 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 834

Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + + P +VE LR K++  V  G+    A+
Sbjct: 835 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 865



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 162/350 (46%), Gaps = 30/350 (8%)

Query: 188 VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
           + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 597 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 655

Query: 248 DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
             DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 656 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 703

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
           +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 704 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 763

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 764 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 820

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
           T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 821 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 868

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
            +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 869 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 918



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 1544 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 1599

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 1600 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 1648

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 1649 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 1707

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + DIACGS       ++    V++WG G 
Sbjct: 1708 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDAQTLCLTDDDTVWSWGDGD 1766

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 1767 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 1805



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 546 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 592

Query: 476 KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
            +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 593 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 652

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 653 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 712

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 713 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 761



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG+G    L  G   G  I          P+ +E         I CG++ ++ +T
Sbjct: 765 GLVFSWGDGDFGKLGRGGSEGCNI----------PQNIERLNGQGVCQIECGAQFSLALT 814

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT SG +Y W
Sbjct: 815 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 874

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+ 
Sbjct: 875 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 920



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 1544 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 1591

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 1592 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 1651

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 1652 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 1711

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 1712 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 1753



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 10/114 (8%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G V+ WG+G  + L  G+ + V      RR    P+ ++        +IA GS H V  T
Sbjct: 1809 GAVYTWGKGDYHRLGHGSDDHV------RR----PRQVQGLQGKKVIAIATGSLHCVCCT 1858

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
            + G++++WG+   G+LG G    +  P+L+ AL G  ++ VACG  HT A + S
Sbjct: 1859 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 1912


>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
          Length = 4833

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2958 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3007

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G+I++ GE + G+LG G+ +  +  P+ I AL+   I  VA   G  H  A+T+ G +++
Sbjct: 3008 GKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFS 3067

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AAITS+G+L+++G G 
Sbjct: 3068 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGLGE 3124

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK-LFT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ +  +F+
Sbjct: 3125 YGRLGHGDNTTQLRPKLVKVLLGHRVIQVACG-----------SRDAQTLALTDEGFVFS 3173

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   VP  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3174 WGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3233

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3234 LGHGTDVHVRKPQMVEG-LRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTT 3292

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3293 VNRKPTLVQGLEGQKITRVACGSSHSVA 3320



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 195/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3949 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTSTEALATLRPVQLIGGEQTLFA 3998

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 3999 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGE 4058

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  I  G  H+A IT++G+LFT+G
Sbjct: 4059 VYSWGEA--EDGKLGHGNRSPCDRPRVIES-LRGVEVVDIAAGGAHSACITASGELFTWG 4115

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGHGD      P+ V+ L+  + +  +CG          +G            +
Sbjct: 4116 KGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACG----------SGDAQTLCLTDDDMV 4165

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   +P+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4166 WSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4225

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4226 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4283

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K++  V CGS  T A
Sbjct: 4284 TTNAIQRPRLVAALQGKKINRVACGSAHTLA 4314



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 169/340 (49%), Gaps = 36/340 (10%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2953 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIYA 3012

Query: 372  WGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
             G+  +    LG          Q++ +S+++ +KV+          +  G  H  A+T  
Sbjct: 3013 CGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVA----------VHSGGRHAMALTVD 3062

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            GK+F++G+G  G LGH  R +   PR +E LK  +    +CG  H+AAI           
Sbjct: 3063 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT---------- 3112

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
              SS +L++WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G 
Sbjct: 3113 --SSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGF 3170

Query: 540  VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            VFS G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG
Sbjct: 3171 VFSWGDGDFGKLGRGGSEGCNVPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3229

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               +LGHG + + + P +VE LR K++  V  G+    A+
Sbjct: 3230 DYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAV 3269



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/333 (33%), Positives = 165/333 (49%), Gaps = 26/333 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G ++  GE   NG LG  ++   I    +  AL      S  V+   ++  G +HA+ +T
Sbjct: 3008 GKIYACGEAT-NGRLGLGLSSGTIPIPRQITAL------SNYVIKKVAVHSGGRHAMALT 3060

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
              G++FSWGEG  GKLGH    +   P+LI+AL    I  +ACG  H+ A+T SG+LY+W
Sbjct: 3061 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSW 3120

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDG 430
            G G    G LG     +   P+ V   + G ++  + CG     T A+T  G +F++GDG
Sbjct: 3121 GLG--EYGRLGHGDNTTQLRPKLVK-VLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDG 3177

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             FG LG G     +VP+ +E L         CG   + A+ +            S  ++T
Sbjct: 3178 DFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 3225

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WG G   +LGHG       P  V+         VA G    +A+T TGQV++ G  D+GQ
Sbjct: 3226 WGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQ 3285

Query: 551  LGSPGST-GKFPTRIEGNIKHRYIEDIACGSYH 582
             G+  +T  + PT ++G ++ + I  +ACGS H
Sbjct: 3286 QGNGTTTVNRKPTLVQG-LEGQKITRVACGSSH 3317



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 164/362 (45%), Gaps = 48/362 (13%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G+V+ WGE   +G LG        S  DR     P+V+ES   ++   IA G  H+  +T
Sbjct: 4057 GEVYSWGEA-EDGKLGHGNR----SPCDR-----PRVIESLRGVEVVDIAAGGAHSACIT 4106

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD--LY 370
              G++F+WG+G  G+LGHG   D   PKL+DAL G  +  VACG      + L+ D  ++
Sbjct: 4107 ASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTDDDMVW 4166

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+       IP K+   + GL +  + CG   + A+T +G ++T+G G
Sbjct: 4167 SWGDG--DYGKLGRGGSDGCKIPMKID-SLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4223

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +  LGHG       PR+V+ L+  K +  + G  H     E              +++T
Sbjct: 4224 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------------DGEVYT 4271

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGD  EGQLG G       P  V         +VACG + T+A + +             
Sbjct: 4272 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS------------- 4318

Query: 551  LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG------KGANGQLG 604
               P + GK P ++     H     I      + ++   SE++         +G  GQ G
Sbjct: 4319 --KPTNAGKLPAQVPMEYNHLQEIPIMALRNRLVLLHHISELFCPCIPMFDLEGRLGQTG 4376

Query: 605  HG 606
            HG
Sbjct: 4377 HG 4378



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 162/332 (48%), Gaps = 40/332 (12%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++ +WG      LG  + A+V+ P    AL+   +  + C E     ++ SG +Y+    
Sbjct: 415 EVIAWG-----LLGWKLYANVNGPIQCKALSSLGVTQIVCSEKGFLILSSSGAVYS---- 465

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
             N         + H +  +        +I  +   P   H  A++S G++F++G G  G
Sbjct: 466 -QNYKSTTLAPMLIHVLSSR--------KIVKLAAHPDGQHYLALSSNGEVFSWGCGDGG 516

Query: 434 ALGHGDRSSTSVPREVETLKELK----TVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
            LGHGD +    P+ + T    +     V  +CG  ++AAI             +  +L+
Sbjct: 517 RLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVACGSTYSAAIT------------ADGELY 564

Query: 490 TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSAD 547
           TWG G  G+LGHG +E +  P+ V     +    VACG   + T+A+T  GQV+S G  D
Sbjct: 565 TWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGD 624

Query: 548 YGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
           YG+LG  GS G K P  +E  ++   I  + CGS     ++   +VYTWGKG N +LGHG
Sbjct: 625 YGKLGRGGSDGCKTPKLVE-KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHG 683

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            +E+ + P L+++L+ K+V  V  GS    A+
Sbjct: 684 TDEHVRYPKLLDSLQGKKVVDVAVGSTHCLAL 715



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 161/352 (45%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3001 LFAVTVEGKIYACGEATNGRLGLGLSSGTIPI-PRQITALSNYVIKKVAVHSGGRHAMAL 3059

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3060 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3107

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G+++SWG G  G+LGHG       PKL+  L G  +  VACG  +  T A+T 
Sbjct: 3108 SAAITSSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTD 3167

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       +P+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3168 EGFVFSWGDG--DFGKLGRGGSEGCNVPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3224

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +             
Sbjct: 3225 TWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTG----------- 3273

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3274 -QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3324



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 165/346 (47%), Gaps = 37/346 (10%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
           L    I C  K  ++++  G ++S             ++    P LI  L+   I  +A 
Sbjct: 442 LGVTQIVCSEKGFLILSSSGAVYS----------QNYKSTTLAPMLIHVLSSRKIVKLAA 491

Query: 356 ---GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV---SGQMEGLQISSIC 409
              G+ H  A++ +G++++WG G  + G LG         P+ +   +G+  G  +  + 
Sbjct: 492 HPDGQ-HYLALSSNGEVFSWGCG--DGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVA 548

Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV--WHT 467
           CG  ++AAIT+ G+L+T+G G +G LGHG     + P  V   K LK V  +CG     T
Sbjct: 549 CGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQT 608

Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
            A+ E        NG    ++++WGDG  G+LG G ++    P  V+   D+   KV CG
Sbjct: 609 LAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCG 656

Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
              ++ALT  GQV++ G  D  +LG          ++  +++ + + D+A GS H   ++
Sbjct: 657 SQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALT 716

Query: 588 SKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
              EV +W  G+N +L H D    NK+ P  +  L  K +  + CG
Sbjct: 717 DDGEVLSW--GSNDKLQHFDTLFSNKKQPKALPGLNSKHIVGISCG 760



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 135/276 (48%), Gaps = 24/276 (8%)

Query: 208 LNFVASGGLDDANSRSSTADSFRISLSSA-----VSSSSQGSCHEDFDGLGDVFIWGEGL 262
           L   +SG +   N +S+T     I + S+     +++   G  +      G+VF WG G 
Sbjct: 455 LILSSSGAVYSQNYKSTTLAPMLIHVLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGD 514

Query: 263 GNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQS----IACGSKHAVLVTKQGQIF 318
           G  L  G    +E           PK++ +     A      +ACGS ++  +T  G+++
Sbjct: 515 GGRLGHGDTTYLE----------EPKMIGTFNGKQAGKHVVHVACGSTYSAAITADGELY 564

Query: 319 SWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGI 376
           +WG G+ G+LGHG   D + P ++ A  G  +  VAC  G+  T AVT +G +++WGDG 
Sbjct: 565 TWGRGNYGRLGHGSSEDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDG- 623

Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
            + G LG+        P+ V  +++ L I  +CCG   + A+T  G+++T+G G    LG
Sbjct: 624 -DYGKLGRGGSDGCKTPKLVE-KLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLG 681

Query: 437 HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           HG       P+ +++L+  K V  + G  H  A+ +
Sbjct: 682 HGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALTD 717



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 108/229 (47%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2950 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 2996

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   + +P  +    +    KVA   G    
Sbjct: 2997 GSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHA 3056

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            +ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3057 MALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 3116

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +Y+WG G  G+LGHGDN  +  P LV+ L   +V  V CGS     + L
Sbjct: 3117 LYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLAL 3165



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 134/279 (48%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3950 SGTIYGWG---HNHRGQLGGIEGAKVKVPTSTEA-LATLRPVQLIGGEQTLFAVTADGKL 4005

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   ++ V  + G  H  A+            
Sbjct: 4006 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALS----------- 4054

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    +    +A G + +  +TA+G++F+
Sbjct: 4055 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFT 4113

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  ++    HR I D+ACGS       ++    V++WG G 
Sbjct: 4114 WGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI-DVACGSGDAQTLCLTDDDMVWSWGDGD 4172

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4173 YGKLGRGGSDGCKIPMKIDSLTGLGVVKVECGSQFSVAL 4211



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 91/182 (50%), Gaps = 22/182 (12%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ +V +T
Sbjct: 615 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLVEKLQDLDIVKVCCGSQFSVALT 664

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ+++WG+G   +LGHG +  V YPKL+D+L G  +  VA G  H  A+T  G++ +W
Sbjct: 665 KDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSW 724

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP-----WHTAAITSAGKLF 425
           G  D + +   L    +     P+ + G +    I  I CGP     W +++  S GK  
Sbjct: 725 GSNDKLQHFDTLFSNKK----QPKALPG-LNSKHIVGISCGPGQSFAWSSSSEWSVGKRV 779

Query: 426 TF 427
            F
Sbjct: 780 PF 781



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 111/222 (50%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3950 SGTIYGWGHNHRGQLGGIEGAKVKVPTSTEALATLRPVQL------------IGGEQTLF 3997

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3998 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 4057

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + DIA G  H A +++  E++TWGKG
Sbjct: 4058 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKG 4117

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++  P LV+AL+  +V  V CGS     +CL
Sbjct: 4118 RYGRLGHGDSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCL 4159



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 104/215 (48%), Gaps = 19/215 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VL 310
           G+++ WG G   G LG        SS D+   ++    +   V+D   +ACGS  A  + 
Sbjct: 561 GELYTWGRG-NYGRLGHG------SSEDQTTPMVVTAFKGLKVVD---VACGSGDAQTLA 610

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           VT+ GQ++SWG+G  GKLG G       PKL++ L   +I  V CG   + A+T  G +Y
Sbjct: 611 VTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVY 670

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           TWG G +    LG  ++  H    K+   ++G ++  +  G  H  A+T  G++ ++G  
Sbjct: 671 TWGKGDNQ--RLGHGTD-EHVRYPKLLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGSN 727

Query: 431 TFGALGHGDR--SSTSVPREVETLKELKTVMASCG 463
               L H D   S+   P+ +  L     V  SCG
Sbjct: 728 D--KLQHFDTLFSNKKQPKALPGLNSKHIVGISCG 760


>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
            guttata]
          Length = 4864

 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 127/389 (32%), Positives = 199/389 (51%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A   V I +A            +     AQ + CG     ++  
Sbjct: 4001 DVYLWGAG-RHGQLAEAGRNVMIPAA------------APSFSPAQQVVCGQNCTFVIQA 4047

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4048 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4107

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +T+ GKLFTFG+G
Sbjct: 4108 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4164

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+      T GS       ++ 
Sbjct: 4165 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAV-----STDGS------MVWA 4213

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V +   I   KVACG   ++ALT  G V++ G      
Sbjct: 4214 FGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4271

Query: 551  LGSPGSTGKFPTRIEGN--IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +   +IEDIA G+ H   +SS  +VY WG  + GQLG G  
Sbjct: 4272 IGLPEGRARNHNRPQQVPLLAGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHT 4331

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 4332 NHVREPTLVTVLQGKNVRQISAGRCHSAA 4360



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G           +   L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGT----------QEKILQPKLASS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDIINVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVGGLDGIAIQQISAGTSHSLA 732



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 165/334 (49%), Gaps = 21/334 (6%)

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
           A +V++  +++ WG  S  +L  G +  +  PKL  +   S+   +  G++ T  ++  G
Sbjct: 365 APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLASSF--SDAQTIEAGQYCTFVISTDG 422

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            +   G G +    LG  +  S              ++SS      HT A T+ G++F++
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTAAIVEVAGKTSGSNGLSSK 486
           GDG +G LGHG+ S+   P+ ++   + K V+  S G  H+AA+ E              
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------------DG 530

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ-VFSMGS 545
           +L+TWG+G  G+LGHGD+  R +P  VK  D I+  +V+CG S TIAL+  G+ V+S G 
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVK--DIINVGEVSCGSSHTIALSKDGRTVWSFGG 588

Query: 546 ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
            D G+LG   +   +  ++   ++  +I  +  GS     ++S  +VY WG GA   LG 
Sbjct: 589 GDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LGC 646

Query: 606 GDNE-NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G +E     P L+E L   ++  +  G +   A+
Sbjct: 647 GSSEATALRPKLIEELAATRIVDISIGDSHCLAL 680



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 4002 VYLWGAGRHGQLAEAGRNVMIPAAAPSF------SPAQQVVCGQNCTFVIQANGTVLACG 4055

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4056 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4112

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             +  KLFT
Sbjct: 4113 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------ADGKLFT 4160

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++  G  V++ G  DYG
Sbjct: 4161 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYG 4220

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4221 KLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4280

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  V  L    ++ +  G+  T A+
Sbjct: 4281 NHNRPQQVPLLAGVFIEDIAVGAEHTLAL 4309



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 138/278 (49%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      IP          Q+    CG   T  I + G + 
Sbjct: 4001 DVYLWGAGRH-----GQLAEAGRNVMIPAAAPSFSPAQQV---VCGQNCTFVIQANGTVL 4052

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4053 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4102

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +TA G++F+
Sbjct: 4103 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFT 4160

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  
Sbjct: 4161 FGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDY 4219

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4220 GKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL 4257



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 160/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +   N+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--INVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVGGLDGIAIQQISAGTSHSLAWTA 735



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 132/256 (51%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++  I    + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIIN---VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%)

Query: 299  QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
            + IA G++H + ++  G +++WG  S G+LG G    V  P L+  L G N+  ++ G  
Sbjct: 4297 EDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRC 4356

Query: 359  HTCAVT 364
            H+ A T
Sbjct: 4357 HSAAWT 4362


>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
            rerio]
          Length = 4846

 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/389 (32%), Positives = 205/389 (52%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DVF+WG G  +G L  A           R+ L+P +  S     AQ + CG     ++  
Sbjct: 3983 DVFLWGAG-RHGQLAEA----------GRNILVPTLAPS--FSQAQQVVCGQNCTFVIQA 4029

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNI-HMV-ACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +  MV +CG + H+ A+T SG+++
Sbjct: 4030 NGTVSACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTESGEVF 4089

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLF+FG+G
Sbjct: 4090 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFSFGNG 4146

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+         ++G++   ++ 
Sbjct: 4147 DYGRLGLGNTSNKKLPERVSALEGHQVGQVACGLNHTLAV--------SADGMT---VWA 4195

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4196 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRL-- 4253

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +   +IED+A G+ H   +SS  +VY WG  + GQLG G  
Sbjct: 4254 IGLPEGRARNHNRPQQVPALTGVFIEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLGHT 4313

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTL+ AL+ K ++ +  G   +AA
Sbjct: 4314 NHVREPTLISALQGKNIQQISAGRCHSAA 4342



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 189/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 368 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVISS 415

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +       I  V+     + HT A T  G+++
Sbjct: 416 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTSEGEVF 475

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA++  G+L+T+G+G
Sbjct: 476 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEG 533

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 534 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 580

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  V+    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 581 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 640

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 641 CGSSEATALRPKLIEELATTRVV-DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 699

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 700 PITKPKKVIGLDGVAIQQISAGTSHSLA 727



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 157/326 (48%), Gaps = 22/326 (6%)

Query: 317  IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
            +F WG G  G+L      ++  P L  +   S    V CG+  T  +  +G +   G+G 
Sbjct: 3984 VFLWGAGRHGQLAEAGR-NILVPTLAPSF--SQAQQVVCGQNCTFVIQANGTVSACGEGS 4040

Query: 377  HNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDGTFG 433
            +  G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG +G
Sbjct: 4041 Y--GRLGQGNSDDLHVLTVISA-LQGFVVTQMVTSCGSDGHSMALTESGEVFSWGDGDYG 4097

Query: 434  ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
             LGHG+      PR++E L+  + V  SCG  H+A +             S  KLF++G+
Sbjct: 4098 KLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFSFGN 4145

Query: 494  GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ-VFSMGSADYGQLG 552
            G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG+LG
Sbjct: 4146 GDYGRLGLGNTSNKKLPERVSALEGHQVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLG 4205

Query: 553  SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
               ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   N  
Sbjct: 4206 LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEGRARNHN 4265

Query: 613  TPTLVEALRDKQVKSVVCGSNFTAAI 638
             P  V AL    ++ V  G+  T  +
Sbjct: 4266 RPQQVPALTGVFIEDVAVGAEHTLTL 4291



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 138/278 (49%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D++ WG G H     GQ++E      +P       +  Q+    CG   T  I + G + 
Sbjct: 3983 DVFLWGAGRH-----GQLAEAGRNILVPTLAPSFSQAQQV---VCGQNCTFVIQANGTVS 4034

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4035 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHSMALTE---------- 4084

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++FS
Sbjct: 4085 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFS 4142

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+     H+ +  +ACG  H +AV +    V+ +G G  
Sbjct: 4143 FGNGDYGRLGLGNTSNKKLPERVSALEGHQ-VGQVACGLNHTLAVSADGMTVWAFGDGDY 4201

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4202 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4239



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    +    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 431 GLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTSEGEVFSWGDGDYGKLGHG-- 488

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  V++ G++++WGEG  G+
Sbjct: 489 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVSEDGELYTWGEGDFGR 537

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 538 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 594

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P+ V   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 595 NRVYKPKVVEA-LQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 651

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 652 KLIEELATTRVVDISIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 699

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D ++  +++ G S ++A TA
Sbjct: 700 PITKPKKVIGLDGVAIQQISAGTSHSLAWTA 730



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 133/256 (51%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I+S G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 402 TIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGS 461

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A              S  ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 462 DGHTLAFT------------SEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 509

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A++  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 510 C-VSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 565

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P +VEAL+   ++ V  GS  + A+ 
Sbjct: 566 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALT 625

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 626 STGQVYAWGCGACLGC 641



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 38/66 (57%)

Query: 299  QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
            + +A G++H + ++  G +++WG  S G+LG G    V  P LI AL G NI  ++ G  
Sbjct: 4279 EDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGLGHTNHVREPTLISALQGKNIQQISAGRC 4338

Query: 359  HTCAVT 364
            H+ A T
Sbjct: 4339 HSAAWT 4344


>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
            (Silurana) tropicalis]
          Length = 4842

 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 128/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DVF+WG G  +G L  A   V I S             +     AQ + CG     ++  
Sbjct: 3979 DVFLWGAG-RHGQLAEAGRNVMIPSG------------AGSFSQAQQVICGQNCTFVIQA 4025

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4026 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4085

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +T+ GKLFTFG+G
Sbjct: 4086 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4142

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+ L     +CG+ HT A+       S    L    ++ 
Sbjct: 4143 DYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTLAV-------SADGSL----VWA 4191

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4192 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4249

Query: 551  LGSPGSTGKFPTR--IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R  +   +   +I+DIA G+ H   +S+  EVY WG  + GQLG G  
Sbjct: 4250 IGLPEGRARNHNRPQLVPVLLGIFIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLGHT 4309

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV AL+ K ++ +  G   +AA
Sbjct: 4310 NHVREPTLVTALQGKNIRQISAGRCHSAA 4338



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  +    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKL--APCFSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  V+    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGVAIQQISAGTSHSLA 732



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 158/326 (48%), Gaps = 22/326 (6%)

Query: 317  IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
            +F WG G  G+L      +V  P    A + S    V CG+  T  +  +G +   G+G 
Sbjct: 3980 VFLWGAGRHGQLAEAGR-NVMIPS--GAGSFSQAQQVICGQNCTFVIQANGTVLACGEG- 4035

Query: 377  HNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDGTFG 433
             + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG +G
Sbjct: 4036 -SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4093

Query: 434  ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
             LGHG+      PR++E L+  + V  SCG  H+A +             +  KLFT+G+
Sbjct: 4094 KLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------ADGKLFTFGN 4141

Query: 494  GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ-VFSMGSADYGQLG 552
            G  G+LG G+   + +P  V   + +   +VACG + T+A++A G  V++ G  DYG+LG
Sbjct: 4142 GDYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDYGKLG 4201

Query: 553  SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
               ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   N  
Sbjct: 4202 LGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHN 4261

Query: 613  TPTLVEALRDKQVKSVVCGSNFTAAI 638
             P LV  L    +  +  G+  T A+
Sbjct: 4262 RPQLVPVLLGIFIDDIAVGAEHTLAL 4287



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 141/278 (50%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D++ WG G H     GQ++E      IP   SG     Q   + CG   T  I + G + 
Sbjct: 3979 DVFLWGAGRH-----GQLAEAGRNVMIP---SGAGSFSQAQQVICGQNCTFVIQANGTVL 4030

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4031 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4080

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +TA G++F+
Sbjct: 4081 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFT 4138

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+   ++  +I  +ACG  H +AV +  S V+ +G G  
Sbjct: 4139 FGNGDYGRLGLGNTSNKKLPERVTA-LEGLHIGQVACGLNHTLAVSADGSLVWAFGDGDY 4197

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4198 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4235



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 160/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGTLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P+ V   ++G+    +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKPKVVEA-LQGMFTRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D ++  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGVAIQQISAGTSHSLAWTA 735



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 133/256 (51%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P +VEAL+    + V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 4/83 (4%)

Query: 282  RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL 341
            R  L+P +L   + +D   IA G++H + ++  G++++WG  S G+LG G    V  P L
Sbjct: 4262 RPQLVPVLL--GIFID--DIAVGAEHTLALSASGEVYAWGSNSEGQLGLGHTNHVREPTL 4317

Query: 342  IDALNGSNIHMVACGEFHTCAVT 364
            + AL G NI  ++ G  H+ A T
Sbjct: 4318 VTALQGKNIRQISAGRCHSAAWT 4340


>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
           Group]
 gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/354 (32%), Positives = 189/354 (53%), Gaps = 26/354 (7%)

Query: 275 EISSADRRDALLPKVLESTVVLD------AQSIACGSKHAVLVT-KQGQIFSWGEGSGGK 327
           ++   D  D  +P VL  T   D      A  + CG+ H    + ++ Q++SWG G  G+
Sbjct: 56  QLGHGDAEDRPVPTVL--TAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGR 113

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG  +DV  P+ I AL G  I  +ACG+ H  AVT++G +++WG   +  G LG  + 
Sbjct: 114 LGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGR--NQNGQLGLGNT 171

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPR 447
               +P+K+    EG+++  I  G  HTAA+T  G L+ +G G +G LG GDR    +P 
Sbjct: 172 EDSLLPQKIQ-AFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPE 230

Query: 448 EVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR 507
           +V ++   K V+ +CG  HT  +             SS  ++T+G    GQLGHGD E  
Sbjct: 231 KVSSVNGQKMVLVACGWRHTITVS------------SSGSIYTYGWSKYGQLGHGDFEDH 278

Query: 508 VVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN 567
           +VP  ++   D +  +++ G   T+AL A G+++  G   +GQ+G  G      + ++ N
Sbjct: 279 LVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGV-GDNEDHCSPVQVN 337

Query: 568 IKH-RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
             + + +  +ACG  H   ++    V++WG+G +GQLGHG+  ++  P +++AL
Sbjct: 338 FPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDAL 391



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 185/372 (49%), Gaps = 34/372 (9%)

Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
           D  +P+  E +VVL    I+ G+ H+V +   G + SWG G  G+LGHG   D   P ++
Sbjct: 16  DEAVPEAPERSVVL----ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVL 71

Query: 343 ----DALNGSNIHMVACGEFHTCAVTLSG-DLYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
               D   G    +V CG  HT A +     LY+WG G  + G LG  +    + P+ + 
Sbjct: 72  TAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWG--DFGRLGHGNSSDVFNPQPIQ 129

Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
             ++G++I+ I CG  H  A+T AG + ++G    G LG G+   + +P++++  + ++ 
Sbjct: 130 A-LQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRV 188

Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
            M + G  HTAA+ E               L+ WG G  G LG GD + R++P  V   +
Sbjct: 189 KMIAAGAEHTAAVTE------------DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVN 236

Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-----PTRIEGNIKHRY 572
                 VACG   TI ++++G +++ G + YGQLG     G F     P ++E  +K   
Sbjct: 237 GQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGH----GDFEDHLVPHKLEA-LKDTT 291

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
           I  I+ G  H   +++  ++Y WG    GQ+G GDNE+  +P  V    +++V  V CG 
Sbjct: 292 ISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGW 351

Query: 633 NFTAAICLHKGV 644
             T A+   K V
Sbjct: 352 RHTLALTEAKNV 363



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/250 (34%), Positives = 128/250 (51%), Gaps = 16/250 (6%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           ++   +  D+LLP+ +++   +  + IA G++H   VT+ G ++ WG G  G LG G   
Sbjct: 165 QLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRD 224

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
           D   P+ + ++NG  + +VACG  HT  V+ SG +YT+  G    G LG      H +P 
Sbjct: 225 DRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTY--GWSKYGQLGHGDFEDHLVPH 282

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           K+   ++   IS I  G  HT A+ + GKL+ +G   FG +G GD      P +V    E
Sbjct: 283 KLE-ALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNE 341

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
            K V  +CG  HT A+ E            +K +F+WG G  GQLGHG+   R +P  + 
Sbjct: 342 QKVVQVACGWRHTLALTE------------AKNVFSWGRGTSGQLGHGEIVDRNIPKMID 389

Query: 515 -VSDDISFCK 523
            +S D S CK
Sbjct: 390 ALSSDGSACK 399


>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
          Length = 448

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/354 (32%), Positives = 189/354 (53%), Gaps = 26/354 (7%)

Query: 275 EISSADRRDALLPKVLESTVVLD------AQSIACGSKHAVLVT-KQGQIFSWGEGSGGK 327
           ++   D  D  +P VL  T   D      A  + CG+ H    + ++ Q++SWG G  G+
Sbjct: 51  QLGHGDAEDRPVPTVL--TAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGR 108

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG  +DV  P+ I AL G  I  +ACG+ H  AVT++G +++WG   +  G LG  + 
Sbjct: 109 LGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGR--NQNGQLGLGNT 166

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPR 447
               +P+K+    EG+++  I  G  HTAA+T  G L+ +G G +G LG GDR    +P 
Sbjct: 167 EDSLLPQKIQA-FEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPE 225

Query: 448 EVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR 507
           +V ++   K V+ +CG  HT  +             SS  ++T+G    GQLGHGD E  
Sbjct: 226 KVSSVNGQKMVLVACGWRHTITVS------------SSGSIYTYGWSKYGQLGHGDFEDH 273

Query: 508 VVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN 567
           +VP  ++   D +  +++ G   T+AL A G+++  G   +GQ+G  G      + ++ N
Sbjct: 274 LVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGV-GDNEDHCSPVQVN 332

Query: 568 IKH-RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
             + + +  +ACG  H   ++    V++WG+G +GQLGHG+  ++  P +++AL
Sbjct: 333 FPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMIDAL 386



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 185/372 (49%), Gaps = 34/372 (9%)

Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
           D  +P+  E +VVL    I+ G+ H+V +   G + SWG G  G+LGHG   D   P ++
Sbjct: 11  DEAVPEAPERSVVL----ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVL 66

Query: 343 ----DALNGSNIHMVACGEFHTCAVTLSG-DLYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
               D   G    +V CG  HT A +     LY+WG G  + G LG  +    + P+ + 
Sbjct: 67  TAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWG--DFGRLGHGNSSDVFNPQPIQ 124

Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
             ++G++I+ I CG  H  A+T AG + ++G    G LG G+   + +P++++  + ++ 
Sbjct: 125 A-LQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRV 183

Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
            M + G  HTAA+ E               L+ WG G  G LG GD + R++P  V   +
Sbjct: 184 KMIAAGAEHTAAVTE------------DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVN 231

Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-----PTRIEGNIKHRY 572
                 VACG   TI ++++G +++ G + YGQLG     G F     P ++E  +K   
Sbjct: 232 GQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGH----GDFEDHLVPHKLEA-LKDTT 286

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
           I  I+ G  H   +++  ++Y WG    GQ+G GDNE+  +P  V    +++V  V CG 
Sbjct: 287 ISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGW 346

Query: 633 NFTAAICLHKGV 644
             T A+   K V
Sbjct: 347 RHTLALTEAKNV 358



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/250 (34%), Positives = 128/250 (51%), Gaps = 16/250 (6%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           ++   +  D+LLP+ +++   +  + IA G++H   VT+ G ++ WG G  G LG G   
Sbjct: 160 QLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRD 219

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
           D   P+ + ++NG  + +VACG  HT  V+ SG +YT+  G    G LG      H +P 
Sbjct: 220 DRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTY--GWSKYGQLGHGDFEDHLVPH 277

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           K+   ++   IS I  G  HT A+ + GKL+ +G   FG +G GD      P +V    E
Sbjct: 278 KLEA-LKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNE 336

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
            K V  +CG  HT A+ E            +K +F+WG G  GQLGHG+   R +P  + 
Sbjct: 337 QKVVQVACGWRHTLALTE------------AKNVFSWGRGTSGQLGHGEIVDRNIPKMID 384

Query: 515 -VSDDISFCK 523
            +S D S CK
Sbjct: 385 ALSSDGSACK 394


>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
          Length = 5093

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 206/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 3222 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3271

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ + AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3272 GKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFS 3331

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3332 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3388

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3389 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3437

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3438 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3497

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3498 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3556

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV  L  +++  V CGS+ + A
Sbjct: 3557 VNRKPTLVHGLEGQKITRVACGSSHSVA 3584



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 194/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 4209 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 4258

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4259 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4318

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G++++ +  G  H+A +T+AG L+T+G
Sbjct: 4319 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVADVAAGGAHSACVTAAGDLYTWG 4375

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 4376 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG----------SGDAQTLCLTDDDTV 4425

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4426 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4485

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4486 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4543

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4544 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4574



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 174/355 (49%), Gaps = 37/355 (10%)

Query: 287  PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
            P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 703  PIQCEGLASLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 752

Query: 347  GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
              NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 753  SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISTFSGKQA 810

Query: 402  GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
            G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 811  GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 870

Query: 462  CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
            CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 871  CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 918

Query: 520  SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
               KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 919  DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 977

Query: 579  GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
            GS H   ++  SEV++W  G+N Q  H D     K  PT +  L  K +  + CG
Sbjct: 978  GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACG 1030



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/340 (32%), Positives = 168/340 (49%), Gaps = 36/340 (10%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 3217 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3276

Query: 372  WGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
             G+  +    LG          QV+ +S ++ +KV+          +  G  H  A+T  
Sbjct: 3277 CGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVA----------VHSGGRHATALTVD 3326

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            GK+F++G+G  G LGH  R +   PR +E LK  +    +CG  H+AA+           
Sbjct: 3327 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT---------- 3376

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
              SS +L+TWG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G 
Sbjct: 3377 --SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3434

Query: 540  VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            VFS G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG
Sbjct: 3435 VFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3493

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               +LGHG + + + P +VE LR K++  V  G+    A+
Sbjct: 3494 DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3533



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 161/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3265 LFAVTVEGKVYACGEATNGRLGLGLSSGTVPI-PRQVTALSSYVVKKVAVHSGGRHATAL 3323

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3324 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3371

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3372 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3431

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3432 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3488

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 3489 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3536

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V   +     +VACG S ++A T
Sbjct: 3537 GQVYAWGDNDHGQQGNGTTTVNRKPTLVHGLEGQKITRVACGSSHSVAWT 3586



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 154/332 (46%), Gaps = 40/332 (12%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 685 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVTQIACAEKRFLILSRNGRVYT---- 735

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
                   Q        P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 736 --------QAYNSDTLAPQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 786

Query: 434 ALGHGDRSSTSVPREVETLKELK----TVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
            LGHGD      P+ + T    +     V  +CG  ++AAI             +  +L+
Sbjct: 787 RLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGSTYSAAIT------------AEGELY 834

Query: 490 TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSAD 547
           TWG G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  D
Sbjct: 835 TWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD 894

Query: 548 YGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
           YG+LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG
Sbjct: 895 YGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHG 953

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             E+ + P L+E L+ K+V  V  GS    A+
Sbjct: 954 TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 985



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 121/242 (50%), Gaps = 19/242 (7%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G    +E           PKV+ +    
Sbjct: 759 IAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLE----------EPKVISTFSGK 808

Query: 297 DAQS----IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM 352
            A      IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  
Sbjct: 809 QAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVID 868

Query: 353 VAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC 410
           VAC  G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + C
Sbjct: 869 VACGSGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRC 925

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
           G   + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+
Sbjct: 926 GSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLAL 985

Query: 471 VE 472
            E
Sbjct: 986 TE 987



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 3214 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 3260

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  V         KVA   G    
Sbjct: 3261 GSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHA 3320

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3321 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3380

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3381 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3429



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 4210 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4265

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4266 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4314

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4315 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYT 4373

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + DIACGS       ++    V++WG G 
Sbjct: 4374 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDAQTLCLTDDDTVWSWGDGD 4432

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4433 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4471



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 885  GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 934

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 935  KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 994

Query: 373  G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 995  GSNDQCQHFDTL----RVTKPEPTALPG-LDTKHIVGIACGPAQSFAWSS 1039



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 4210 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 4257

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 4258 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4317

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4318 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTWGKG 4377

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4378 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4419



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  I          P+ +E         I CG++ ++ +T
Sbjct: 3433 GLVFSWGDGDFGKLGRGGSEGCNI----------PQNIERLNGQGVCQIECGAQFSLALT 3482

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT SG +Y W
Sbjct: 3483 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 3542

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+ 
Sbjct: 3543 GDNDH--GQQGNGTTTVNRKPTLVHG-LEGQKITRVACGSSHSVAWTTV 3588



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 10/114 (8%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G V+ WG+G  + L  G+ + V      RR    P+ ++        +IA GS H V  T
Sbjct: 4475 GAVYTWGKGDYHRLGHGSDDHV------RR----PRQVQGLQGKKVIAIATGSLHCVCCT 4524

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
            + G++++WG+   G+LG G    +  P+L+ AL G  ++ VACG  HT A + S
Sbjct: 4525 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 4578


>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus gallus]
          Length = 4860

 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 200/389 (51%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3997 DVYLWGAG-RHGQLAEA----------GRNVMVPVAAPS--FSQAQQVVCGQNCTFVIQA 4043

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +T+ GKLFTFG+G
Sbjct: 4104 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 4160

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+      T GS       ++ 
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAV-----STDGS------MVWA 4209

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V +   I   KVACG   ++ALT  G V++ G      
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4267

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +   +IEDIA G+ H   +SS  +VY WG  + GQLG G  
Sbjct: 4268 IGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHT 4327

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTL+  L+ K ++ +  G   +AA
Sbjct: 4328 NHVREPTLITVLQGKNIRQISAGRCHSAA 4356



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G           +   L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGT----------QEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGVSIQQISAGTSHSLA 732



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V   V+ P        S    V CG+  T  +  +G +   G
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVPVAAPSF------SQAQQVVCGQNCTFVIQANGTVLACG 4051

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4052 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4108

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             +  KLFT
Sbjct: 4109 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------ADGKLFT 4156

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++  G  V++ G  DYG
Sbjct: 4157 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYG 4216

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4217 KLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4276

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  V  L    ++ +  G+  T A+
Sbjct: 4277 NHNRPQQVPVLSGVFIEDIAVGAEHTLAL 4305



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 139/276 (50%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG G H     GQ++E    +   V+      Q   + CG   T  I + G +   
Sbjct: 3997 DVYLWGAGRH-----GQLAEAGRNVMVPVAAPSFS-QAQQVVCGQNCTFVIQANGTVLAC 4050

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 4098

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +TA G++F+ G
Sbjct: 4099 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFG 4158

Query: 545  SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQ 602
            + DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  G+
Sbjct: 4159 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGK 4217

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4218 LGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL 4253



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D +S  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGVSIQQISAGTSHSLAWTA 735



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 37/66 (56%)

Query: 299  QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
            + IA G++H + ++  G +++WG  S G+LG G    V  P LI  L G NI  ++ G  
Sbjct: 4293 EDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRC 4352

Query: 359  HTCAVT 364
            H+ A T
Sbjct: 4353 HSAAWT 4358


>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 448

 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 116/359 (32%), Positives = 186/359 (51%), Gaps = 39/359 (10%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIA-CGSKHAVLVT-KQGQIFSWGEGSGGKLGHGV 332
           ++   D  D  +P +L    V    S+  CG+ H    + +Q Q++SWG G  G+LGHG 
Sbjct: 51  QLGHGDAEDRPVPTLLSGFDVPGIASVVICGADHTTAYSDEQMQLYSWGWGDFGRLGHGN 110

Query: 333 EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI 392
            +DV +P+ I+AL G  I  +ACG+ H  AVT +G +++WG   +  G LG  +     +
Sbjct: 111 SSDVFHPQPIEALQGIKIKQIACGDSHCLAVTDAGQVHSWGR--NQNGQLGLGNTEDSLL 168

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
           P+K+    EG+ +  I  G  HTAAI   G L+ +G G +G LG GDR+   VP +V ++
Sbjct: 169 PQKIHA-FEGVCVKMIAAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSV 227

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC 512
           +  K V+ +CG  HT  +             SS  L+T+G    GQLGHGD E  +VP  
Sbjct: 228 EGEKMVLVACGWRHTVTVS------------SSGDLYTYGWSKYGQLGHGDFEDHLVPHK 275

Query: 513 VKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH-- 570
           ++   D    ++A G   T+A+   G+++  G   +GQ+G           +  N+ H  
Sbjct: 276 LEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVG-----------VADNVDHCS 324

Query: 571 ---------RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
                    + +  +ACG  H   ++    V++WG+G +GQLGHG+  ++ TP +++AL
Sbjct: 325 PVQVIFPDEQKVAQVACGWRHTLALTENKNVFSWGRGTSGQLGHGEIIDRNTPKMIDAL 383



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 181/369 (49%), Gaps = 31/369 (8%)

Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
           D  +P+  E TV L    ++ G+ H+V +     + SWG G  G+LGHG   D   P L+
Sbjct: 11  DEEVPEAPEQTVAL----VSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLL 66

Query: 343 DALNGSNI-HMVACGEFHTCAVT-LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM 400
              +   I  +V CG  HT A +     LY+WG G  + G LG  +    + P+ +   +
Sbjct: 67  SGFDVPGIASVVICGADHTTAYSDEQMQLYSWGWG--DFGRLGHGNSSDVFHPQPIEA-L 123

Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
           +G++I  I CG  H  A+T AG++ ++G    G LG G+   + +P+++   + +   M 
Sbjct: 124 QGIKIKQIACGDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGVCVKMI 183

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
           + G  HTAAI+E               L+ WG G  G LG GD   R+VP  V   +   
Sbjct: 184 AAGAEHTAAILE------------DGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEK 231

Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-----PTRIEGNIKHRYIED 575
              VACG   T+ ++++G +++ G + YGQLG     G F     P ++E  +K R+I  
Sbjct: 232 MVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGH----GDFEDHLVPHKLEA-LKDRFISQ 286

Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           IA G  H   V+   ++Y WG    GQ+G  DN +  +P  V    +++V  V CG   T
Sbjct: 287 IAGGWRHTMAVAGDGKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDEQKVAQVACGWRHT 346

Query: 636 AAICLHKGV 644
            A+  +K V
Sbjct: 347 LALTENKNV 355



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 122/252 (48%), Gaps = 18/252 (7%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           ++   +  D+LLP+ + +   +  + IA G++H   + + G ++ WG G  G LG G   
Sbjct: 157 QLGLGNTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRN 216

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
           D   P+ + ++ G  + +VACG  HT  V+ SGDLYT+  G    G LG      H +P 
Sbjct: 217 DRLVPEKVSSVEGEKMVLVACGWRHTVTVSSSGDLYTY--GWSKYGQLGHGDFEDHLVPH 274

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           K+   ++   IS I  G  HT A+   GKL+ +G   FG +G  D      P +V    E
Sbjct: 275 KLEA-LKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDE 333

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
            K    +CG  HT A+ E            +K +F+WG G  GQLGHG+   R  P   K
Sbjct: 334 QKVAQVACGWRHTLALTE------------NKNVFSWGRGTSGQLGHGEIIDRNTP---K 378

Query: 515 VSDDISFCKVAC 526
           + D +S    AC
Sbjct: 379 MIDALSLDGYAC 390


>gi|302820496|ref|XP_002991915.1| hypothetical protein SELMODRAFT_430200 [Selaginella moellendorffii]
 gi|300140301|gb|EFJ07026.1| hypothetical protein SELMODRAFT_430200 [Selaginella moellendorffii]
          Length = 253

 Score =  186 bits (472), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 102/166 (61%), Positives = 116/166 (69%), Gaps = 13/166 (7%)

Query: 1   MASFQQNILVERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ 60
           MA   +N  VERD EQ       G  LLKYGRRGKPKFCPFRLS+DE  LIWY+GKEEK 
Sbjct: 1   MADLARNGAVERDIEQ-------GAQLLKYGRRGKPKFCPFRLSNDETHLIWYSGKEEKS 53

Query: 61  LKLSHVSRIIPGQRTAVFQRYPQPEKEYQSFSLIYRN-RSLDLICKDKDEAELWFTALRA 119
           L+LS ++RI+PGQRTA FQRYP+ EKEYQSFSLIY N RSLDLICKDKDEAE+WF  L+A
Sbjct: 54  LRLSSITRIVPGQRTANFQRYPRLEKEYQSFSLIYGNDRSLDLICKDKDEAEVWFVGLKA 113

Query: 120 LISEDNRCKSRSDSISSDSPRSHTQKNSP---SHVSSISSDLTNKD 162
           L+S     + R DS S   P S +  NSP   S +S  SS   N D
Sbjct: 114 LVSGGQLSRLRFDSRSECGPPSDS--NSPATWSRISPASSPFGNVD 157


>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
            carolinensis]
          Length = 4839

 Score =  186 bits (472), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2965 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3014

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3015 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 3074

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AAITS+G+L+++G G 
Sbjct: 3075 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYSWGLGE 3131

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3132 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3180

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3181 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3240

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3241 LGHGTDVHVRKPQVVEG-LRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTT 3299

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + +
Sbjct: 3300 VNRKPTLVQGLEGQKITRVACGSSHSVS 3327



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 194/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3955 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 4004

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4005 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4064

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  I  G  H+A IT+AG L+T+G
Sbjct: 4065 VYSWGEA--EDGKLGHGNRSPCDRPRVIES-LRGIEVVDIAAGGAHSACITAAGDLYTWG 4121

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGHGD      P+ VE L+  + +  +CG          +G            +
Sbjct: 4122 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG----------SGDAQTLCLTDDDTV 4171

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4172 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDY 4231

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4232 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4289

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K++  V CGS  T A
Sbjct: 4290 TTNAIQRPRLVAALQGKKINRVACGSAHTLA 4320



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 175/355 (49%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D+  P+L+ +L 
Sbjct: 443 PIQCEGLASLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDILGPQLVQSLA 492

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++++WG G  + G LG    +    P+ +S   G+  
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVFSWGCG--DGGRLGHGDTVPLEEPKMISALSGKQA 550

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  S
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 610

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 611 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV+CG   ++ALT  GQV+S G  D  +LG       ++P  +EG ++   + D+  
Sbjct: 659 DIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGEKVIDVVA 717

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEVY+W  G+N Q  H D     K  PT +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVYSW--GSNDQCQHFDTLRITKPDPTALPGLDSKHIVGIACG 770



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/342 (32%), Positives = 170/342 (49%), Gaps = 36/342 (10%)

Query: 310  LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
            + T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +
Sbjct: 2958 VATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 3017

Query: 370  YTWGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
            Y  G+  +    LG          Q++ +S+++ +KV+          +  G  H  A+T
Sbjct: 3018 YACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVA----------VHSGGRHAMALT 3067

Query: 420  SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
              GK+F++G+G  G LGH  R +   PR +E LK  +    +CG  H+AAI         
Sbjct: 3068 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT-------- 3119

Query: 480  SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTAT 537
                SS +L++WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  
Sbjct: 3120 ----SSGELYSWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDE 3175

Query: 538  GQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
            G VFS G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWG
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWG 3234

Query: 597  KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            KG   +LGHG + + + P +VE LR K++  V  G+    A+
Sbjct: 3235 KGDYFRLGHGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAV 3276



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 164/329 (49%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++S    +   IA  S   H + +   G++FSWG G GG+LG
Sbjct: 470 NGRVYTQAYNSDILGPQLVQSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLG 529

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I AL+G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 530 HGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 587

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 588 SSEDQTIPMLVTG-LKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V  SCG   + A+ +              ++++WG G   +LGHG 
Sbjct: 647 KTPKLIEKLQDLDIVKVSCGSQFSVALTK------------DGQVYSWGKGDNQRLGHGT 694

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         V  G +  +ALT   +V+S GS D  Q   +   T   PT
Sbjct: 695 EEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTEDSEVYSWGSNDQCQHFDTLRITKPDPT 754

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 755 ALPG-LDSKHIVGIACGPAQSFAWSSCSE 782



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 170/329 (51%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++ +WG      +G    A+VS P   + L    +  +AC E     ++ +G +YT    
Sbjct: 425 EVIAWG-----LIGWKYYANVSGPIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQA-- 477

Query: 376 IHNLGLLGQ--VSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
            +N  +LG   V  ++     K++   +G           H  A+ + G++F++G G  G
Sbjct: 478 -YNSDILGPQLVQSLASRNIVKIAAHSDG----------HHYLALAATGEVFSWGCGDGG 526

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 527 RLGHGD----TVP-----LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E + +P+ V     +    V+CG   + T+A+T  GQV+S G  DYG+
Sbjct: 578 RGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   I  ++CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 638 LGRGGSDGCKTPKLIE-KLQDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEE 696

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ ++V  VV GS    A+
Sbjct: 697 HVRYPKLLEGLQGEKVIDVVAGSTHCLAL 725



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 161/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3008 LFAVTVEGKVYACGEATNGRLGLGLSSGTVPI-PRQITALSNYVVKKVAVHSGGRHAMAL 3066

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3067 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3114

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G+++SWG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3115 SAAITSSGELYSWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3174

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3175 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3231

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K +  + G  H  A+ +             
Sbjct: 3232 TWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTG----------- 3280

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V+  +     +VACG S +++ T
Sbjct: 3281 -QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVSWT 3329



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 149/313 (47%), Gaps = 30/313 (9%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+VF WG G G  L  G  + V +       AL  K     VV 
Sbjct: 499 IAAHSDGHHYLALAATGEVFSWGCGDGGRL--GHGDTVPLEEPKMISALSGKQAGKHVV- 555

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  V+C 
Sbjct: 556 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 612

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L I  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDIVKVSCGSQF 669

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           + A+T  G+++++G G    LGHG       P+ +E L+  K +    G  H  A+ E  
Sbjct: 670 SVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCLALTE-- 727

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV---PLCVKVSDDISFCKVACGHSIT 531
                       ++++WG   + Q  H D   R+    P  +   D      +ACG + +
Sbjct: 728 ----------DSEVYSWGSNDQCQ--HFDTL-RITKPDPTALPGLDSKHIVGIACGPAQS 774

Query: 532 IALTATGQVFSMG 544
            A ++  + +S+G
Sbjct: 775 FAWSSCSE-WSIG 786



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 105/222 (47%), Gaps = 17/222 (7%)

Query: 423  KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            K+F +G      LG    S   VP   ETL  L              +V+VAG +     
Sbjct: 2964 KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAGGSKSLFA 3010

Query: 483  LSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSITIALTATG 538
            ++ + K++  G+   G+LG G +   V +P  +    +    KVA   G    +ALT  G
Sbjct: 3011 VTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDG 3070

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E+Y+WG G
Sbjct: 3071 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLG 3130

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3131 EYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3172



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3956 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4011

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4012 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4060

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    +A G + +  +TA G +++
Sbjct: 4061 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYT 4119

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    +R I DIACGS       ++    V++WG G 
Sbjct: 4120 WGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI-DIACGSGDAQTLCLTDDDTVWSWGDGD 4178

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTGVGVVKVECGSQFSVAL 4217



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 111/222 (50%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3956 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 4003

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 4004 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + DIA G  H A +++  ++YTWGKG
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTWGKG 4123

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4124 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4165



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 13/168 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  I          P+ +E         I CG++ ++ +T
Sbjct: 3176 GLVFSWGDGDFGKLGRGGSEGCNI----------PQNIERLNGQGVCQIECGAQFSLALT 3225

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT +G +Y W
Sbjct: 3226 KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQVYAW 3285

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ + T+
Sbjct: 3286 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVSWTT 3330


>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 3894

 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 126/392 (32%), Positives = 205/392 (52%), Gaps = 31/392 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G ++    + D L          L    IA GSK   +V+ +
Sbjct: 2057 VFVWGLNDKDQL--GGMKGSKVKLPVQSDFL--------SQLWPIHIAGGSKSLFIVSHE 2106

Query: 315  GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTW 372
            G++++ GEG+ G+LG G   +V YP+ I  L+   I  VA   G  H  A+TL G +++W
Sbjct: 2107 GKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKVFSW 2166

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            G+G    G LG  + ++   P+ +   +   +I  I CG  H+AAITS+G+L+T+G G +
Sbjct: 2167 GEG--EDGKLGHGNRLNLDKPKMIEA-LRSKKIRDIACGSSHSAAITSSGELYTWGLGEY 2223

Query: 433  GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK-LFTW 491
            G LGHGD  +   P+ +++L   + V  +CG            + + +  L+ +  +F+W
Sbjct: 2224 GRLGHGDNITQLKPKLIKSLVGHRIVQVACG-----------SRDAQTLALTDEGWVFSW 2272

Query: 492  GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
            GDG  G+LG G +E   +P  ++  + +   ++ CG   ++ALT TG+V++ G  DY +L
Sbjct: 2273 GDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRL 2332

Query: 552  GSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            G  GS      PT IE ++K + +  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 2333 GH-GSDQHVRKPTVIE-SLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTI 2390

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
              + P LV  L D  +  V CGS+ + A  L 
Sbjct: 2391 VNRKPALVHGLEDVHINRVACGSSHSIAWTLQ 2422



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/335 (34%), Positives = 171/335 (51%), Gaps = 31/335 (9%)

Query: 253  GDVFIWGEGLGNGLLG-GAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
            G ++  GEG  NG LG G  N V            P    S  V+   ++  G KHA+ +
Sbjct: 2107 GKLYACGEG-TNGRLGLGHSNNVPYPR--------PIPFLSQYVIKKVAVHSGGKHAMAL 2157

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T  G++FSWGEG  GKLGHG   ++  PK+I+AL    I  +ACG  H+ A+T SG+LYT
Sbjct: 2158 TLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYT 2217

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGD 429
            WG G +  G LG    I+   P+ +   + G +I  + CG     T A+T  G +F++GD
Sbjct: 2218 WGLGEY--GRLGHGDNITQLKPKLIKS-LVGHRIVQVACGSRDAQTLALTDEGWVFSWGD 2274

Query: 430  GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
            G FG LG G     ++P  +E L  L+ V   CG   + A+ +              +++
Sbjct: 2275 GDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTG------------EVW 2322

Query: 490  TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
            TWG G   +LGHG  +    P  ++   D     VA G    +A+T TGQV++ G  D+G
Sbjct: 2323 TWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHG 2382

Query: 550  QLGSPGST--GKFPTRIEGNIKHRYIEDIACGSYH 582
            Q G+ G+T   + P  + G ++  +I  +ACGS H
Sbjct: 2383 QQGN-GTTIVNRKPALVHG-LEDVHINRVACGSSH 2415



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/392 (31%), Positives = 196/392 (50%), Gaps = 27/392 (6%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            + G G ++ WG     G LGG + G ++         +P   E+   L    +  G +  
Sbjct: 3027 WGGSGTIYGWGHN-HRGQLGG-IEGAKVK--------IPTPCEALSTLRPVQLVGGEQTL 3076

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT  G++++ G G+GG+LG G    V  P L++++    I  +A   G  H  A++  
Sbjct: 3077 FAVTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSAD 3136

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
             D+Y+WG+G  + G LG  + ++   P+ +   ++G +I  I CG  H+AAITS G+L+T
Sbjct: 3137 NDVYSWGEG--DDGKLGHGNRLACETPKLIEA-LQGYEIIDIACGGAHSAAITSTGQLYT 3193

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+ +E L   K +  +CG          +G           
Sbjct: 3194 WGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACG----------SGDAQTLCITDDD 3243

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   VP  ++    +   KV CG   ++ALT +G V++ G  
Sbjct: 3244 NVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKG 3303

Query: 547  DYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
            DY +LG   G   + P ++   ++ + I  IA GS H    S + EV+TWG    GQLG 
Sbjct: 3304 DYHRLGHGTGEHVRRPKKVAA-LQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGD 3362

Query: 606  GDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                  Q P LV AL+ K++ +V CGS  T A
Sbjct: 3363 DTTNAIQRPRLVSALQGKKITNVACGSAHTLA 3394



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/326 (33%), Positives = 165/326 (50%), Gaps = 17/326 (5%)

Query: 316  QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
            ++F WG     +LG    + V  P   D L+      +A G      V+  G LY  G+G
Sbjct: 2056 RVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQLWPIHIAGGSKSLFIVSHEGKLYACGEG 2115

Query: 376  IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
             +    LG  + + +  P     Q   ++  ++  G  H  A+T  GK+F++G+G  G L
Sbjct: 2116 TNGRLGLGHSNNVPYPRPIPFLSQYV-IKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKL 2174

Query: 436  GHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGA 495
            GHG+R +   P+ +E L+  K    +CG  H+AAI             SS +L+TWG G 
Sbjct: 2175 GHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAIT------------SSGELYTWGLGE 2222

Query: 496  EGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQLGS 553
             G+LGHGD   ++ P  +K        +VACG   + T+ALT  G VFS G  D+G+LG 
Sbjct: 2223 YGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGR 2282

Query: 554  PGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
             GS G   P  IE  +    +  I CG+     ++   EV+TWGKG   +LGHG +++ +
Sbjct: 2283 GGSEGCNIPHNIE-RLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVR 2341

Query: 613  TPTLVEALRDKQVKSVVCGSNFTAAI 638
             PT++E+L+DK+V  V  G+    A+
Sbjct: 2342 KPTVIESLKDKKVIHVAVGALHCLAV 2367



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/285 (32%), Positives = 143/285 (50%), Gaps = 27/285 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WGEG  +G LG           +R +   PK++E+      + IACGS H+  +T
Sbjct: 2161 GKVFSWGEG-EDGKLG---------HGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAIT 2210

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
              G++++WG G  G+LGHG       PKLI +L G  I  VACG  +  T A+T  G ++
Sbjct: 2211 SSGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVF 2270

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+       IP  +  ++  L++  I CG   + A+T  G+++T+G G
Sbjct: 2271 SWGDG--DFGKLGRGGSEGCNIPHNIE-RLNALEVVQIECGAQFSLALTKTGEVWTWGKG 2327

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +  LGHG       P  +E+LK+ K +  + G  H  A+ +              +++ 
Sbjct: 2328 DYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTG------------QVYA 2375

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
            WGD   GQ G+G       P  V   +D+   +VACG S +IA T
Sbjct: 2376 WGDNDHGQQGNGTTIVNRKPALVHGLEDVHINRVACGSSHSIAWT 2420



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 136/279 (48%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      IP      +  L+   +  G     A+T+ GK+
Sbjct: 3030 SGTIYGWG---HNHRGQLGGIEGAKVKIPTPCEA-LSTLRPVQLVGGEQTLFAVTADGKV 3085

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S  VP  +E+++   +K +  + G  H  A+       S  N 
Sbjct: 3086 YATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLAL-------SADN- 3137

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
                 +++WG+G +G+LGHG+      P  ++         +ACG + + A+T+TGQ+++
Sbjct: 3138 ----DVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYT 3193

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  IE  + ++ I D+ACGS       ++    V++WG G 
Sbjct: 3194 WGKGRYGRLGHGDSEDQLKPKLIEELVGYKVI-DVACGSGDAQTLCITDDDNVWSWGDGD 3252

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +E+L    V  V CGS F+ A+
Sbjct: 3253 YGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVAL 3291



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 109/223 (48%), Gaps = 16/223 (7%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   +P   E L  L+ V              V G+ +  
Sbjct: 3030 SGTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQL------------VGGEQTLF 3077

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  K++  G GA G+LG G  +  +VP  ++    +   K+A   G    +AL+A  
Sbjct: 3078 AVTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADN 3137

Query: 539  QVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
             V+S G  D G+LG       + P  IE  ++   I DIACG  H A ++S  ++YTWGK
Sbjct: 3138 DVYSWGEGDDGKLGHGNRLACETPKLIEA-LQGYEIIDIACGGAHSAAITSTGQLYTWGK 3196

Query: 598  GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            G  G+LGHGD+E++  P L+E L   +V  V CGS     +C+
Sbjct: 3197 GRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCI 3239



 Score = 56.6 bits (135), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 18/117 (15%)

Query: 253  GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            G+V+ WG+G    LG+G           S    R    P V+ES        +A G+ H 
Sbjct: 2319 GEVWTWGKGDYFRLGHG-----------SDQHVRK---PTVIESLKDKKVIHVAVGALHC 2364

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTL 365
            + VT  GQ+++WG+   G+ G+G       P L+  L   +I+ VACG  H+ A TL
Sbjct: 2365 LAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINRVACGSSHSIAWTL 2421



 Score = 43.1 bits (100), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 2/107 (1%)

Query: 535  TATGQVFSMGSADYGQLGS-PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
            T   +VF  G  D  QLG   GS  K P + +  +   +   IA GS  + +VS + ++Y
Sbjct: 2052 TVGCRVFVWGLNDKDQLGGMKGSKVKLPVQSDF-LSQLWPIHIAGGSKSLFIVSHEGKLY 2110

Query: 594  TWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+G NG+LG G + N   P  +  L    +K V   S    A+ L
Sbjct: 2111 ACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMAL 2157


>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
          Length = 4733

 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 133/414 (32%), Positives = 214/414 (51%), Gaps = 32/414 (7%)

Query: 234  SSAVSSSSQGSCHEDFDGLG-DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLES 292
            +SA    SQ S  E    +G  VF+WG    + L  G + G ++    + D L       
Sbjct: 2874 TSANVGRSQDSTGEPSSTVGCRVFVWGLNDKDQL--GGMKGSKVKLPVQSDFL------- 2924

Query: 293  TVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM 352
               L    IA GSK   +V+ +G++++ GEG+ G+LG G   +V YP+ I  L+   I  
Sbjct: 2925 -SQLWPIHIAGGSKSLFIVSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKK 2983

Query: 353  VAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC 410
            VA   G  H  A+TL G +++WG+G    G LG  + ++   P+ +   +   +I  I C
Sbjct: 2984 VAVHSGGKHAMALTLDGKVFSWGEG--EDGKLGHGNRLNLDKPKMIEA-LRSKKIRDIAC 3040

Query: 411  GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
            G  H+AAITS+G+L+T+G G +G LGHGD  +   P+ +++L   + V  +CG       
Sbjct: 3041 GSSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQVACG------- 3093

Query: 471  VEVAGKTSGSNGLSSKK-LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHS 529
                 + + +  L+ +  +F+WGDG  G+LG G +E   +P  ++  + +   ++ CG  
Sbjct: 3094 ----SRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQ 3149

Query: 530  ITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVS 587
             ++ALT TG+V++ G  DY +LG  GS      PT IE ++K + +  +A G+ H   V+
Sbjct: 3150 FSLALTKTGEVWTWGKGDYFRLGH-GSDQHVRKPTVIE-SLKDKKVIHVAVGALHCLAVT 3207

Query: 588  SKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
               +VY WG   +GQ G+G     + P LV  L D  +  V CGS+ + A  L 
Sbjct: 3208 DTGQVYAWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINRVACGSSHSIAWTLQ 3261



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/392 (31%), Positives = 196/392 (50%), Gaps = 27/392 (6%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            + G G ++ WG     G LGG + G ++         +P   E+   L    +  G +  
Sbjct: 3866 WGGSGTIYGWGHN-HRGQLGG-IEGAKVK--------IPTPCEALSTLRPVQLVGGEQTL 3915

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT  G++++ G G+GG+LG G    V  P L++++    I  +A   G  H  A++  
Sbjct: 3916 FAVTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSAD 3975

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
             D+Y+WG+G  + G LG  + ++   P+ +   ++G +I  I CG  H+AAITS G+L+T
Sbjct: 3976 NDVYSWGEG--DDGKLGHGNRLACETPKLIEA-LQGYEIIDIACGGAHSAAITSTGQLYT 4032

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+ +E L   K +  +CG          +G           
Sbjct: 4033 WGKGRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACG----------SGDAQTLCITDDD 4082

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   VP  ++    +   KV CG   ++ALT +G V++ G  
Sbjct: 4083 NVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKG 4142

Query: 547  DYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
            DY +LG   G   + P ++   ++ + I  IA GS H    S + EV+TWG    GQLG 
Sbjct: 4143 DYHRLGHGTGEHVRRPKKVAA-LQGKKIISIATGSLHCVACSDEGEVFTWGDNDEGQLGD 4201

Query: 606  GDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                  Q P LV AL+ K++ +V CGS  T A
Sbjct: 4202 DTTNAIQRPRLVSALQGKKITNVACGSAHTLA 4233



 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/251 (35%), Positives = 136/251 (54%), Gaps = 19/251 (7%)

Query: 393 PRKVSGQMEGLQISSICCGPW--HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
           P++++G + G+ +  I   P   H  A+T   +++++G+G  G LGHGD S+   P  ++
Sbjct: 504 PQEMTG-LSGINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQ 562

Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
            LK    +   CG  ++AAI         +NG     L+TWG G  G+LGHG AE  + P
Sbjct: 563 ALKGKDIIDVECGGTYSAAI--------SANG----ALYTWGRGNYGRLGHGTAEDCLTP 610

Query: 511 LCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGN 567
             +    D    KVACG  ++ T+ +T+ G+V+S G  DYG+LG  GS G K P  IE  
Sbjct: 611 TMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIE-K 669

Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKS 627
           +++  I  + CG+     +S    VYTWGKG   +LGH   EN + P +VE LRD++V  
Sbjct: 670 LQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVG 729

Query: 628 VVCGSNFTAAI 638
           V  G +   A+
Sbjct: 730 VSLGVSHVLAL 740



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 136/276 (49%), Gaps = 17/276 (6%)

Query: 306 KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTL 365
           KH + +TK  +++SWG G GG+LGHG  +    P LI AL G +I  V CG  ++ A++ 
Sbjct: 525 KHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAISA 584

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW--HTAAITSAGK 423
           +G LYTWG G  N G LG  +      P  +S  +    I  + CG +  HT  ITS GK
Sbjct: 585 NGALYTWGRG--NYGRLGHGTAEDCLTPTMISA-LSDEHIIKVACGSFYAHTLCITSQGK 641

Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
           ++++GDG +G LG G    + +PR +E L+ +K V   CG   + A+ E           
Sbjct: 642 VYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQFSVALSE----------- 690

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
               ++TWG G   +LGH   E    P  V+V  D     V+ G S  +ALT  G+V+  
Sbjct: 691 -DGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGW 749

Query: 544 GSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
           G  +  Q+           R+   +K + +  + CG
Sbjct: 750 GKNENKQICDSSELFVQQPRLIEALKGQKVVGVCCG 785



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 169/350 (48%), Gaps = 31/350 (8%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+  ++   L  + I C  +  +++T+ G++F     S          D   P+ +  L+
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFFMYYSS----------DTQCPQEMTGLS 511

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           G N+  +A      H  A+T   ++Y+WG+G  + G LG     +   P  +   ++G  
Sbjct: 512 GINMIKIAAHPEGKHYLALTKDYEVYSWGNG--DGGRLGHGDTSTKEEPTLIQA-LKGKD 568

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           I  + CG  ++AAI++ G L+T+G G +G LGHG       P  +  L +   +  +CG 
Sbjct: 569 IIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGS 628

Query: 465 W--HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
           +  HT  I             S  K+++WGDG  G+LG G ++   +P  ++   ++   
Sbjct: 629 FYAHTLCIT------------SQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIV 676

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSY 581
           +V CG   ++AL+  G V++ G  +  +LG P     +FP  +E  ++ R +  ++ G  
Sbjct: 677 QVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVE-VLRDRKVVGVSLGVS 735

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
           H+  ++ + EVY WGK  N Q+        Q P L+EAL+ ++V  V CG
Sbjct: 736 HVLALTDQGEVYGWGKNENKQICDSSELFVQQPRLIEALKGQKVVGVCCG 785



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 115/221 (52%), Gaps = 15/221 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V+ WG G G  L  G        ++ + +  L + L+   ++D +   CG  ++  ++ 
Sbjct: 535 EVYSWGNGDGGRLGHG-------DTSTKEEPTLIQALKGKDIIDVE---CGGTYSAAISA 584

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF--HTCAVTLSGDLYT 371
            G +++WG G+ G+LGHG   D   P +I AL+  +I  VACG F  HT  +T  G +Y+
Sbjct: 585 NGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYS 644

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WGDG  + G LG+       +PR +  +++ ++I  + CG   + A++  G ++T+G G 
Sbjct: 645 WGDG--DYGKLGRGGSDGSKLPRLIE-KLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGE 701

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
              LGH    +   P  VE L++ K V  S GV H  A+ +
Sbjct: 702 GWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTD 742



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 136/279 (48%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      IP      +  L+   +  G     A+T+ GK+
Sbjct: 3869 SGTIYGWG---HNHRGQLGGIEGAKVKIPTPCEA-LSTLRPVQLVGGEQTLFAVTADGKV 3924

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S  VP  +E+++   +K +  + G  H  A+       S  N 
Sbjct: 3925 YATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLAL-------SADN- 3976

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
                 +++WG+G +G+LGHG+      P  ++         +ACG + + A+T+TGQ+++
Sbjct: 3977 ----DVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITSTGQLYT 4032

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  IE  + ++ I D+ACGS       ++    V++WG G 
Sbjct: 4033 WGKGRYGRLGHGDSEDQLKPKLIEELVGYKVI-DVACGSGDAQTLCITDDDNVWSWGDGD 4091

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +E+L    V  V CGS F+ A+
Sbjct: 4092 YGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVAL 4130



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 109/223 (48%), Gaps = 16/223 (7%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   +P   E L  L+ V              V G+ +  
Sbjct: 3869 SGTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQL------------VGGEQTLF 3916

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  K++  G GA G+LG G  +  +VP  ++    +   K+A   G    +AL+A  
Sbjct: 3917 AVTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADN 3976

Query: 539  QVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
             V+S G  D G+LG       + P  IE  ++   I DIACG  H A ++S  ++YTWGK
Sbjct: 3977 DVYSWGEGDDGKLGHGNRLACETPKLIEA-LQGYEIIDIACGGAHSAAITSTGQLYTWGK 4035

Query: 598  GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            G  G+LGHGD+E++  P L+E L   +V  V CGS     +C+
Sbjct: 4036 GRYGRLGHGDSEDQLKPKLIEELVGYKVIDVACGSGDAQTLCI 4078



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 68/110 (61%), Gaps = 2/110 (1%)

Query: 532 IALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           +ALT   +V+S G+ D G+LG    ST + PT I+  +K + I D+ CG  + A +S+  
Sbjct: 528 LALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQA-LKGKDIIDVECGGTYSAAISANG 586

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG+G  G+LGHG  E+  TPT++ AL D+ +  V CGS +   +C+
Sbjct: 587 ALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCI 636



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 87/167 (52%), Gaps = 13/167 (7%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +          LP+++E    +    + CG++ +V ++
Sbjct: 640 GKVYSWGDGDYGKLGRGGSDGSK----------LPRLIEKLQNVKIVQVYCGAQFSVALS 689

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           + G +++WG+G G KLGH  E +V +P++++ L    +  V+ G  H  A+T  G++Y W
Sbjct: 690 EDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGW 749

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           G   +    +   SE+    PR +   ++G ++  +CCGP  + A T
Sbjct: 750 GKNENK--QICDSSELFVQQPRLIEA-LKGQKVVGVCCGPAQSFAWT 793


>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 4834

 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 133/408 (32%), Positives = 209/408 (51%), Gaps = 33/408 (8%)

Query: 237  VSSSSQGSCHEDF--DGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTV 294
            V + S+ S H     D    VF+WG    + L  G + G ++         +P   ES  
Sbjct: 2967 VKTLSETSSHSKLWSDSPTKVFVWGLNDKDQL--GGLKGSKVK--------VPVYSESLT 3016

Query: 295  VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA 354
             L    IA GSK   +V+  G++++ GEG+ G+LG G   +V+ P  + +LN   I  VA
Sbjct: 3017 ALKPIHIAGGSKSLFIVSYDGKLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVA 3076

Query: 355  C--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
               G  H  A+TL G +++WG+G    G LG  + +S   P+ +   ++  +I  I CG 
Sbjct: 3077 VHSGGKHAMALTLDGKVFSWGEG--EDGKLGHDNRLSLDRPKMIEA-LKSKRIRDIACGS 3133

Query: 413  WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
             H+AAI+S G+LFT+G G +G LGHGD  +   P+ V+ L     V  +CG         
Sbjct: 3134 SHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPKLVKALLGHHIVQVACG--------- 3184

Query: 473  VAGKTSGSNGLSSKKL-FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
               + + +  LS++ L F+WGDG  G+LG G +E   +P  ++  + +  C + CG   +
Sbjct: 3185 --SRDAQTLALSAEGLVFSWGDGDFGKLGRGGSEGCDIPHNIERLNGLGVCMIECGAQFS 3242

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
            +ALT  GQV++ G  DY +LG  GS      PT +E ++  + I  +A G+ H    + +
Sbjct: 3243 LALTKFGQVYTWGKGDYFRLGH-GSDQHVRKPTLVE-SLSEKKIVHVAVGALHCLCATDQ 3300

Query: 590  SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             +VY WG   +GQ G+G     + P+LV  L   +V  V CGS+ + A
Sbjct: 3301 GQVYAWGDNDHGQQGNGTILVNRKPSLVLNLEGVRVNRVACGSSHSIA 3348



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 195/398 (48%), Gaps = 27/398 (6%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG V G ++         +P   E+   L    +  G +  + 
Sbjct: 3966 GSGTIYGWGHN-HRGQLGG-VEGPKVK--------IPTSCEALSALRPVQLVGGEQTLLA 4015

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    +  P L++++    I  VA   G  H  A++  G 
Sbjct: 4016 VTSDGKVYATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGK 4075

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+G  + G LG  ++     P+ +   ++G +I  I CG  H+AA+T+ G+++T+G
Sbjct: 4076 VYSWGEG--DDGKLGHGNKNGCDHPQLIDA-LQGKEIVDIACGGAHSAAVTAGGEIYTWG 4132

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGHGD      P+ VETL   K +  +CG          +G            +
Sbjct: 4133 KGRYGRLGHGDSEDQMKPKLVETLIGFKVIDIACG----------SGDAQTLCITDDDNV 4182

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   +P+ ++    +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4183 WSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDY 4242

Query: 549  GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
             +LG       + P +I   ++ + I  IA GS H    S   EV+TWG    GQLG G 
Sbjct: 4243 HRLGHGSDEHVRHPKKIAA-LQGKKIICIATGSLHCVACSDLGEVFTWGDNDEGQLGDGT 4301

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVS 645
                  P LV  L+ K +  V CGS  + A   +K  S
Sbjct: 4302 MNAIHRPRLVVTLQGKNINRVACGSAHSLAWSTNKSTS 4339



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 155/331 (46%), Gaps = 34/331 (10%)

Query: 295  VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA 354
            V+   ++  G KHA+ +T  G++FSWGEG  GKLGH     +  PK+I+AL    I  +A
Sbjct: 3071 VIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIRDIA 3130

Query: 355  CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP-- 412
            CG  H+ A++ +G+L+TWG G +  G LG    ++   P+ V   + G  I  + CG   
Sbjct: 3131 CGSSHSAAISSTGELFTWGLGEY--GRLGHGDNLTQLRPKLVKALL-GHHIVQVACGSRD 3187

Query: 413  WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
              T A+++ G +F++GDG FG LG G      +P  +E L  L   M  CG   + A+ +
Sbjct: 3188 AQTLALSAEGLVFSWGDGDFGKLGRGGSEGCDIPHNIERLNGLGVCMIECGAQFSLALTK 3247

Query: 473  VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
                          +++TWG G   +LGHG  +    P  V+   +     VA G    +
Sbjct: 3248 FG------------QVYTWGKGDYFRLGHGSDQHVRKPTLVESLSEKKIVHVAVGALHCL 3295

Query: 533  ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSE 591
              T  GQV++ G  D+GQ G+          +  N++   +  +ACGS H IA  +S + 
Sbjct: 3296 CATDQGQVYAWGDNDHGQQGNGTILVNRKPSLVLNLEGVRVNRVACGSSHSIAWTTSDTH 3355

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRD 622
                              N   P L  AL+D
Sbjct: 3356 A----------------PNMTEPVLFTALKD 3370



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 179/355 (50%), Gaps = 29/355 (8%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+  +S   L  + I C  +  +++T  G+++     S          +   P+ I+  +
Sbjct: 468 PQSCDSIRELGVKQIVCAERWLLILTLTGKVYIMYYSS----------ETQCPEQIEGFD 517

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           G  I  +A      H+ A++  GD+Y+WG+G  + G LG     S   P K++ ++ G  
Sbjct: 518 GKEISKLAAHADGKHSLALSCDGDVYSWGNG--DGGRLGHGDNNSRDQPTKIT-ELVGKN 574

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +  I CG  ++AA+TS+G+++T+G G +G LGHG     +VP  V  LK+   V  +CG 
Sbjct: 575 VIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIACG- 633

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
                    +G        ++  +F+WGDG  G+LG G ++    P  ++   DI   +V
Sbjct: 634 ---------SGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDIEVARV 684

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYH 582
            CG   ++ALT +G V++ G  D  +LG  GS    +FP  +EG +  + I+ +A GS H
Sbjct: 685 YCGSQFSLALTKSGSVYTWGKGDNHRLGH-GSENHVRFPKLVEG-LNGKCIKKVAVGSGH 742

Query: 583 IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           +  ++   EVY WG+  NGQ+G     N   PTL+  L+ K +  + CG N + A
Sbjct: 743 VLALTDDGEVYGWGRNDNGQVGETSETNVSEPTLLTLLQGKNIVDIDCGPNQSIA 797



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 151/305 (49%), Gaps = 31/305 (10%)

Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
           P+  D++    +  + C E     +TL+G +Y          ++   SE     P ++ G
Sbjct: 468 PQSCDSIRELGVKQIVCAERWLLILTLTGKVY----------IMYYSSETQ--CPEQIEG 515

Query: 399 QMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK 456
             +G +IS +       H+ A++  G ++++G+G  G LGHGD +S   P ++  L    
Sbjct: 516 -FDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKITELVGKN 574

Query: 457 TVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
            +  SCG  ++AA+             SS +++TWG G  G+LGHG +E   VP  V   
Sbjct: 575 VIHISCGATYSAAVT------------SSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGL 622

Query: 517 DDISFCKVACG--HSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYI 573
            D     +ACG   + T+A+T TG VFS G   YG+LG+ GS G K P  IE  ++   +
Sbjct: 623 KDYFIVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIE-KLQDIEV 681

Query: 574 EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSN 633
             + CGS     ++    VYTWGKG N +LGHG   + + P LVE L  K +K V  GS 
Sbjct: 682 ARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSG 741

Query: 634 FTAAI 638
              A+
Sbjct: 742 HVLAL 746



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 140/289 (48%), Gaps = 31/289 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           GDV+ WG G G G LG   N       + RD   P  +   V  +   I+CG+ ++  VT
Sbjct: 540 GDVYSWGNGDG-GRLGHGDN-------NSRDQ--PTKITELVGKNVIHISCGATYSAAVT 589

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLY 370
             G++++WG G+ G+LGHG   D + P L+  L    I  +AC  G+  T AVT +G ++
Sbjct: 590 SSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVDIACGSGDAQTLAVTNTGLVF 649

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG +   L    S+ S   P+ +  +++ ++++ + CG   + A+T +G ++T+G G
Sbjct: 650 SWGDGGYG-KLGTGGSDGSK-TPKLIE-KLQDIEVARVYCGSQFSLALTKSGSVYTWGKG 706

Query: 431 TFGALGHGDRSSTSVPREVETL--KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               LGHG  +    P+ VE L  K +K V    G  H  A+ +              ++
Sbjct: 707 DNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSG--HVLALTD------------DGEV 752

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
           + WG    GQ+G         P  + +    +   + CG + +IA +++
Sbjct: 753 YGWGRNDNGQVGETSETNVSEPTLLTLLQGKNIVDIDCGPNQSIAWSSS 801



 Score = 46.6 bits (109), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 49/103 (47%), Gaps = 2/103 (1%)

Query: 539  QVFSMGSADYGQLGS-PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
            +VF  G  D  QLG   GS  K P   E     + I  IA GS  + +VS   ++Y  G+
Sbjct: 2986 KVFVWGLNDKDQLGGLKGSKVKVPVYSESLTALKPIH-IAGGSKSLFIVSYDGKLYACGE 3044

Query: 598  GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            G NG+LG G + N  TP  + +L    +K V   S    A+ L
Sbjct: 3045 GTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMAL 3087


>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Meleagris
            gallopavo]
          Length = 4334

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/389 (31%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3471 DVYLWGAG-RHGQLAEA----------GRNVMVPVAAPS--FSQAQQVVCGQNCTFVIQA 3517

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 3518 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 3577

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +T+ GKLFTFG+G
Sbjct: 3578 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKLFTFGNG 3634

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+            +    ++ 
Sbjct: 3635 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAV-----------SMDGSMVWA 3683

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V +   I   KVACG   ++ALT  G V++ G      
Sbjct: 3684 FGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 3741

Query: 551  LGSPGSTGKFPTRIEGN--IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +   +IEDIA G+ H   +SS  +VY WG  + GQLG G  
Sbjct: 3742 IGLPEGRARNHNRPQQVPVLSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHT 3801

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTL+  L+ K ++ +  G   +AA
Sbjct: 3802 NHVREPTLITVLQGKNIRQISAGRCHSAA 3830



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G           +   L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGT----------QEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE  +    I DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGVSIQQISAGTSHSLA 732



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V   V+ P        S    V CG+  T  +  +G +   G
Sbjct: 3472 VYLWGAGRHGQLAEAGRNVMVPVAAPSF------SQAQQVVCGQNCTFVIQANGTVLACG 3525

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 3526 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 3582

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             +  KLFT
Sbjct: 3583 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------ADGKLFT 3630

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++  G  V++ G  DYG
Sbjct: 3631 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYG 3690

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 3691 KLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 3750

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  V  L    ++ +  G+  T A+
Sbjct: 3751 NHNRPQQVPVLSGVFIEDIAVGAEHTLAL 3779



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 138/276 (50%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG G H     GQ++E    +   V+      Q   + CG   T  I + G +   
Sbjct: 3471 DVYLWGAGRH-----GQLAEAGRNVMVPVAAPSFS-QAQQVVCGQNCTFVIQANGTVLAC 3524

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 3525 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 3572

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +TA G++F+ G
Sbjct: 3573 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFG 3632

Query: 545  SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQ 602
            + DYG+LG    S  K P R+   ++   I  +ACG  H +AV    S V+ +G G  G+
Sbjct: 3633 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGK 3691

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 3692 LGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL 3727



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D +S  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGVSIQQISAGTSHSLAWTA 735



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 112/234 (47%), Gaps = 27/234 (11%)

Query: 413  WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
            WH   +     ++ +G G  G L    R+   VP    +  + + V+  CG   T  I  
Sbjct: 3464 WH---LGGKCDVYLWGAGRHGQLAEAGRN-VMVPVAAPSFSQAQQVV--CGQNCTFVI-- 3515

Query: 473  VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC-----G 527
                   +NG     +   G+G+ G+LG G+++   V   +         ++       G
Sbjct: 3516 ------QANG----TVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 3565

Query: 528  HSITIALTATGQVFSMGSADYGQLGSPGST-GKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
            HS+  ALT +G+VFS G  DYG+LG   S   + P +IE  ++   +  ++CG  H AVV
Sbjct: 3566 HSM--ALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVV 3622

Query: 587  SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            ++  +++T+G G  G+LG G+  NK+ P  V AL   Q+  V CG N T A+ +
Sbjct: 3623 TADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVSM 3676



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 37/66 (56%)

Query: 299  QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
            + IA G++H + ++  G +++WG  S G+LG G    V  P LI  L G NI  ++ G  
Sbjct: 3767 EDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRC 3826

Query: 359  HTCAVT 364
            H+ A T
Sbjct: 3827 HSAAWT 3832


>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
          Length = 657

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/328 (33%), Positives = 168/328 (51%), Gaps = 16/328 (4%)

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           T  G +++WG G  G+LGHG       P+L  +L G  I  V CG +HT AV+  G+L+T
Sbjct: 23  THGGGVYTWGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFT 82

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG G++  G LG  +E  H  P++V   + GL +  I CG  HTA +TS G L+T+GD  
Sbjct: 83  WGGGMY--GKLGHGNESGHSTPKRVD-SLVGLAVVDIACGSRHTAIVTSRGCLYTWGDKE 139

Query: 432 FGALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            G  GHGD       P+ +E L   + V  S   +HT  + +              +++T
Sbjct: 140 NGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAG------------EVYT 187

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG+G  G+LGHG       P  V+        +++CG   +  +TA G++++ G  ++GQ
Sbjct: 188 WGEGKFGRLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQ 247

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      K    +  ++   ++  I CG  H   ++S  EVYTWG G +G+LGHG  + 
Sbjct: 248 LGHGDKVNKVKPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKK 307

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             TP LVE L  ++V  V   +  TA +
Sbjct: 308 VSTPQLVEKLVGQKVVCVASYNEHTACL 335



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/300 (36%), Positives = 161/300 (53%), Gaps = 24/300 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG G  +G LG   NG +          +P++  S        + CGS H   V+
Sbjct: 26  GGVYTWGRG-DDGRLGHGDNGWK---------YVPRLTHSLAGQVITHVTCGSYHTAAVS 75

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            +G +F+WG G  GKLGHG E+  S PK +D+L G  +  +ACG  HT  VT  G LYTW
Sbjct: 76  SKGNLFTWGGGMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHTAIVTSRGCLYTW 135

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           GD     G+ G      H    K+  ++ G ++  +    +HT  +T AG+++T+G+G F
Sbjct: 136 GD--KENGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGEGKF 193

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           G LGHG   +   PR VETL   + V  SCG +H+A +             +  K++T+G
Sbjct: 194 GRLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVT------------ADGKMYTFG 241

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            G  GQLGHGD   +V P  VK  D +   ++ CG S ++ALT++ +V++ G+ D+G+LG
Sbjct: 242 GGEHGQLGHGDKVNKVKPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLG 301



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 116/224 (51%), Gaps = 20/224 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLEST----VVLDAQSIACGSKHA 308
           G ++ WG+           NGV            PK+LE      VV   Q  ACG  H 
Sbjct: 130 GCLYTWGD---------KENGVAGHGDTEGHQYTPKLLERLSGKRVV---QLSACGF-HT 176

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
             +T  G++++WGEG  G+LGHG E +   P+L++ L G     ++CG FH+  VT  G 
Sbjct: 177 GCLTDAGEVYTWGEGKFGRLGHGAERNCHSPRLVETLLGKRPVQISCGGFHSAVVTADGK 236

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +YT+G G H  G LG   +++   P  V   ++G+ ++ I CG  H+ A+TS+ +++T+G
Sbjct: 237 MYTFGGGEH--GQLGHGDKVNKVKPTLVK-DLDGVFLTQITCGWSHSVALTSSHEVYTWG 293

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           +G  G LGHG     S P+ VE L   K V  +    HTA +VE
Sbjct: 294 NGDHGKLGHGCGKKVSTPQLVEKLVGQKVVCVASYNEHTACLVE 337


>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
 gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
          Length = 437

 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 188/348 (54%), Gaps = 18/348 (5%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK-QGQIFSWGEGSGGKLGHGVE 333
           ++   D +D L P +L +   L+  S+ CG+ H +  ++    ++SWG G  G+LGHG  
Sbjct: 45  QLGHGDAQDRLSPTILSTLEGLEIISVICGADHTIAYSESHTDVYSWGWGDFGRLGHGNS 104

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +D+  P+ I  L+G  I  +ACG+ H  AVT+ G + +WG   +  G LG  +     +P
Sbjct: 105 SDLFTPQPIRQLHGLKIKQIACGDSHCLAVTMEGQVQSWGR--NQNGQLGLGTTEDSLVP 162

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           +K+    +G+ I  +  G  HTAA+T  G+L+ +G G +G LG GDR    VP +V    
Sbjct: 163 QKIQA-FQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPH 221

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
             K VM +CG  HT ++             SS  L+T+G    GQLGHGD    ++P  +
Sbjct: 222 GEKMVMVACGWRHTISVS------------SSGGLYTYGWSKYGQLGHGDYADHLIPHQL 269

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRY 572
           +        +++ G   T+A+T+ G+++  G   +GQ+G   +  +  P +++  ++ + 
Sbjct: 270 EALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSSPVQVKLPLEQKV 329

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           I  I+CG  H   V+ +  V++WG+G NGQLG+G+  ++  P +++AL
Sbjct: 330 IL-ISCGWRHTLAVTERQNVFSWGRGTNGQLGNGECTDRNVPVIIKAL 376



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 174/340 (51%), Gaps = 18/340 (5%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+ G+ H+V +     + +WG G  G+LGHG   D   P ++  L G  I  V CG  HT
Sbjct: 19  ISAGASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILSTLEGLEIISVICGADHT 78

Query: 361 CAVTLS-GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
            A + S  D+Y+WG G  + G LG  +    + P+ +  Q+ GL+I  I CG  H  A+T
Sbjct: 79  IAYSESHTDVYSWGWG--DFGRLGHGNSSDLFTPQPIR-QLHGLKIKQIACGDSHCLAVT 135

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G++ ++G    G LG G    + VP++++  + +   M + G  HTAA+ E       
Sbjct: 136 MEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTE------- 188

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                  +L+ WG G  G LG GD + R+VP  V +        VACG   TI+++++G 
Sbjct: 189 -----DGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMVMVACGWRHTISVSSSGG 243

Query: 540 VFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           +++ G + YGQLG         P ++E  ++  +I  I+ G  H   V+S  ++Y WG  
Sbjct: 244 LYTYGWSKYGQLGHGDYADHLIPHQLEA-LQGSFISQISGGWRHTMAVTSDGKLYGWGWN 302

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             GQ+G GDN ++ +P  V+   +++V  + CG   T A+
Sbjct: 303 KFGQVGVGDNVDRSSPVQVKLPLEQKVILISCGWRHTLAV 342



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/305 (35%), Positives = 149/305 (48%), Gaps = 35/305 (11%)

Query: 254 DVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAV 309
           DV+ WG G    LG+G              +  D   P+ +     L  + IACG  H +
Sbjct: 87  DVYSWGWGDFGRLGHG--------------NSSDLFTPQPIRQLHGLKIKQIACGDSHCL 132

Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
            VT +GQ+ SWG    G+LG G   D   P+ I A  G  I MVA G  HT AVT  G+L
Sbjct: 133 AVTMEGQVQSWGRNQNGQLGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTEDGEL 192

Query: 370 YTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           Y WG G + NLGL  +   +   +P KVS    G ++  + CG  HT +++S+G L+T+G
Sbjct: 193 YGWGWGRYGNLGLGDRKDRL---VPEKVS-LPHGEKMVMVACGWRHTISVSSSGGLYTYG 248

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
              +G LGHGD +   +P ++E L+       S G  HT A+             S  KL
Sbjct: 249 WSKYGQLGHGDYADHLIPHQLEALQGSFISQISGGWRHTMAVT------------SDGKL 296

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           + WG    GQ+G GD   R  P+ VK+  +     ++CG   T+A+T    VFS G    
Sbjct: 297 YGWGWNKFGQVGVGDNVDRSSPVQVKLPLEQKVILISCGWRHTLAVTERQNVFSWGRGTN 356

Query: 549 GQLGS 553
           GQLG+
Sbjct: 357 GQLGN 361


>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Equus caballus]
          Length = 4860

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 199/389 (51%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3997 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4043

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4104 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4160

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+      T GS       ++ 
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----STDGS------MVWA 4209

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4267

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4268 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4327

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K ++ +  G   +AA
Sbjct: 4328 NHVREPTLVTVLQGKNIRQISAGRCHSAA 4356



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  +E     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLVEELAATRIV-DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 155/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4051

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4052 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4108

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4109 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4156

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++  G  V++ G  DYG
Sbjct: 4157 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYG 4216

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4217 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4276

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  +  L    ++ V  G+  T A+
Sbjct: 4277 NHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4305



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 138/276 (50%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG G H     GQ++E    +    +      Q   + CG   T  I + G +   
Sbjct: 3997 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLAC 4050

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 4098

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+ G
Sbjct: 4099 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4158

Query: 545  SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQ 602
            + DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  G+
Sbjct: 4159 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGK 4217

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4218 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4253



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + VE L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLVEELAATRIVDISIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4286 VLAGVVIED---VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 4342

Query: 349  NIHMVACGEFHTCAVT 364
            NI  ++ G  H+ A T
Sbjct: 4343 NIRQISAGRCHSAAWT 4358


>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
          Length = 1871

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 195/357 (54%), Gaps = 20/357 (5%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDA 344
           +P   E+   L+   +A GSK    VT +G+++S GE + G+LG G+ +  V  P+ I A
Sbjct: 18  VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITA 77

Query: 345 LNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
           L+   +  VA   G  H  A+T+ G +++WG+G  + G LG  S ++   PR +   ++ 
Sbjct: 78  LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKT 134

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
            +I  I CG  H+AA+TS+G+L+T+G G +G LGHGD ++   P+ V+ L   + +  +C
Sbjct: 135 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 194

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKL-FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
           G            + + +  L+ + L F+WGDG  G+LG G +E   +P  ++  +    
Sbjct: 195 G-----------SRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 243

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGS 580
           C++ CG   ++ALT +G V++ G  DY +LG       + P  +EG ++ + I  +A G+
Sbjct: 244 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 302

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            H   V+   +VY WG   +GQ G+G     + PTLV+ L  +++  V CGS+ + A
Sbjct: 303 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 359



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 987  GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 1036

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 1037 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 1096

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 1097 VYSWGEA--KDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 1153

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + +  +CG          +G            +
Sbjct: 1154 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG----------SGDAQTLCLTDDDTV 1203

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 1204 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 1263

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 1264 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 1321

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 1322 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 1352



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 158/316 (50%), Gaps = 36/316 (11%)

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLG----------QV 385
           +  P   + L+  N+  VA G     AVT+ G +Y+ G+  +    LG          Q+
Sbjct: 16  IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQI 75

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
           + +S ++ +KV+          +  G  H  A+T  GK+F++G+G  G LGH  R +   
Sbjct: 76  TALSSYVVKKVA----------VHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDK 125

Query: 446 PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE 505
           PR +E LK  +    +CG  H+AA+             SS +L+TWG G  G+LGHGD  
Sbjct: 126 PRLIEALKTKRIRDIACGSSHSAALT------------SSGELYTWGLGEYGRLGHGDNT 173

Query: 506 PRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPT 562
            ++ P  VKV       +VACG   + T+ALT  G VFS G  D+G+LG  GS G   P 
Sbjct: 174 TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 233

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRD 622
            IE  +  + +  I CG+     ++    V+TWGKG   +LGHG + + + P +VE LR 
Sbjct: 234 NIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRG 292

Query: 623 KQVKSVVCGSNFTAAI 638
           K++  V  G+    A+
Sbjct: 293 KKIVHVAVGALHCLAV 308



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 163/350 (46%), Gaps = 30/350 (8%)

Query: 188 VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
           + + T   K Y+  E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 40  LFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 98

Query: 248 DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
             DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 99  TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 146

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
           +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 147 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 206

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 207 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 263

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
           T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 264 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 311

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
            +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 312 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 361



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 988  SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 1043

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 1044 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 1092

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 1093 -SEGEVYSWGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 1151

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR I DIACGS       ++    V++WG G 
Sbjct: 1152 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI-DIACGSGDAQTLCLTDDDTVWSWGDGD 1210

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 1211 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 1249



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/210 (33%), Positives = 99/210 (47%), Gaps = 17/210 (8%)

Query: 435 LGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWGD 493
           LG    S   VP   ETL  L              +V+VAG +     ++ + K+++ G+
Sbjct: 8   LGGLKGSKIKVPSFSETLSALN-------------VVQVAGGSKSLFAVTVEGKVYSCGE 54

Query: 494 GAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSITIALTATGQVFSMGSADYGQ 550
              G+LG G +   V +P  +         KVA   G     ALT  G+VFS G  D G+
Sbjct: 55  ATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGK 114

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG          R+   +K + I DIACGS H A ++S  E+YTWG G  G+LGHGDN  
Sbjct: 115 LGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTT 174

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           +  P +V+ L   +V  V CGS     + L
Sbjct: 175 QLKPKMVKVLLGHRVIQVACGSRDAQTLAL 204



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG+G    L  G   G  I          P+ +E         I CG++ ++ +T
Sbjct: 208 GLVFSWGDGDFGKLGRGGSEGCNI----------PQNIERLNGQGVCQIECGAQFSLALT 257

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT SG +Y W
Sbjct: 258 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 317

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+ 
Sbjct: 318 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 363



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 111/228 (48%), Gaps = 14/228 (6%)

Query: 415  TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            T +   +G ++ +G    G LG  + +   VP   E L  L+ V              + 
Sbjct: 982  TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IG 1029

Query: 475  GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITI 532
            G+ +     +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +
Sbjct: 1030 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCL 1089

Query: 533  ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
            AL++ G+V+S G A  G+LG    +     R+  +++   + D+A G  H A V++  ++
Sbjct: 1090 ALSSEGEVYSWGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 1149

Query: 593  YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            YTWGKG  G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 1150 YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 1197



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 10/114 (8%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G V+ WG+G  + L  G+ + V      RR    P+ ++        +IA GS H V  T
Sbjct: 1253 GAVYTWGKGDYHRLGHGSDDHV------RR----PRQVQGLQGKKVIAIATGSLHCVCCT 1302

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
            + G++++WG+   G+LG G    +  P+L+ AL G  ++ VACG  HT A + S
Sbjct: 1303 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 1356


>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
            [Equus caballus]
          Length = 4840

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 195/357 (54%), Gaps = 20/357 (5%)

Query: 286  LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDA 344
            +P   E+   L+   +A GSK    VT +G++++ GE + G+LG G+ +  V  P+ + A
Sbjct: 2986 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQVTA 3045

Query: 345  LNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
            L+   +  VA   G  H  A+T+ G +++WG+G  + G LG  S ++   PR +   ++ 
Sbjct: 3046 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKT 3102

Query: 403  LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
             +I  I CG  H+AA+TS+G+L+T+G G +G LGHGD ++   P+ V+ L   + +  +C
Sbjct: 3103 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 3162

Query: 463  GVWHTAAIVEVAGKTSGSNGLSSKKL-FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
            G            + + +  L+ + L F+WGDG  G+LG G +E   +P  ++  +    
Sbjct: 3163 G-----------SRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 3211

Query: 522  CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGS 580
            C++ CG   ++ALT +G V++ G  DY +LG       + P  +EG ++ + I  +A G+
Sbjct: 3212 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 3270

Query: 581  YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             H   V+   +VY WG   +GQ G+G     + PTLV+ L  +++  V CGS+ + A
Sbjct: 3271 LHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3327



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3956 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 4005

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4006 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4065

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4066 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIELVDVAAGGAHSACVTAAGDLYTWG 4122

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 4123 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG----------SGDAQTLCLTDDDTV 4172

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4173 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4232

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4233 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4290

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4291 TTNAIQRPRLVPALQGKKVNRVACGSAHTLA 4321



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 174/355 (49%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 492

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     +VP  V  LK LK +  +
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVA 610

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 611 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 659 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 717

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P+ +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 770



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 158/307 (51%), Gaps = 18/307 (5%)

Query: 336  VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRK 395
            +  P   + L+  N+  VA G     AVT+ G +Y  G+  +    LG +S  +  IPR+
Sbjct: 2984 IKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQ 3042

Query: 396  VSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
            V+     + +  ++  G  H  A+T  GK+F++G+G  G LGH  R +   PR +E LK 
Sbjct: 3043 VTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKT 3102

Query: 455  LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
             +    +CG  H+AA+             SS +L+TWG G  G+LGHGD   ++ P  VK
Sbjct: 3103 KRIRDIACGSSHSAALT------------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVK 3150

Query: 515  VSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHR 571
            V       +VACG   + T+ALT  G VFS G  D+G+LG  GS G   P  IE  +  +
Sbjct: 3151 VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQ 3209

Query: 572  YIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
             +  I CG+     ++    V+TWGKG   +LGHG + + + P +VE LR K++  V  G
Sbjct: 3210 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVG 3269

Query: 632  SNFTAAI 638
            +    A+
Sbjct: 3270 ALHCLAV 3276



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 161/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 470 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 529

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 530 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 587

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     +P  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 588 SSEDEAVPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 646

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 647 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 694

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P+
Sbjct: 695 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPS 754

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 755 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 782



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 161/352 (45%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3008 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQVTALSSYVVKKVAVHSGGRHATAL 3066

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 3067 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3114

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3115 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3174

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3175 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3231

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +             
Sbjct: 3232 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAG----------- 3280

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3281 -QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3331



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---- 475

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
                   Q        P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 476 --------QAYNSDTLAPQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 527 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   VP+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 578 RGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 638 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 696

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 555

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 556 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKGLKVIDVACG 612

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 669

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3957 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4012

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4013 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4061

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4062 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYT 4120

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + D+ACGS       ++    V++WG G 
Sbjct: 4121 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DVACGSGDAQTLCLTDDDTVWSWGDGD 4179

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4180 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4218



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 105/238 (44%), Gaps = 30/238 (12%)

Query: 411  GPWHTAAI----TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            GPW    +     S G L   G G          S   VP   ETL  L           
Sbjct: 2957 GPWTPFGVGQGAVSTGSLCCDGVGL---------SQIKVPSFSETLSALN---------- 2997

Query: 467  TAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKV 524
               +V+VAG +     ++ + K++  G+   G+LG G +   V +P  V         KV
Sbjct: 2998 ---VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQVTALSSYVVKKV 3054

Query: 525  AC--GHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
            A   G     ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H
Sbjct: 3055 AVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSH 3114

Query: 583  IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
             A ++S  E+YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3115 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3172



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 674

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 735 GSNDQCQHFDTL----RVTKPEPSALPG-LDTKHIVGIACGPAQSFAWSS 779



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3957 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 4004

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 4005 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4064

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4065 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTWGKG 4124

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  V CGS     +CL
Sbjct: 4125 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 4166


>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Anolis carolinensis]
          Length = 4963

 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 225/460 (48%), Gaps = 45/460 (9%)

Query: 191  FTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCH---- 246
            F+   KA   AE++++   F     + D         +  +  S  ++   + SC     
Sbjct: 4021 FSTTVKA---AEALARGTAFPEGFAVPDLEPVPEEELALLMDNSKWINGMDEQSCPWATS 4077

Query: 247  --EDFD--GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIA 302
              ED+   G  DVF+WG G  +G L  A           R+A+ P    S     AQ + 
Sbjct: 4078 RPEDWHLGGKCDVFLWGAG-RHGQLAEA----------GRNAVSPP--PSPSFCQAQQVI 4124

Query: 303  CGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFH 359
            CG     ++   G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H
Sbjct: 4125 CGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGH 4184

Query: 360  TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
            + A+T SG++++WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +T
Sbjct: 4185 SMALTESGEVFSWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVT 4241

Query: 420  SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
            + GKLFTFG+G +G LG G+ S+  +P  V  L+  +    +CG+ HT  +      T G
Sbjct: 4242 ADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVV-----STDG 4296

Query: 480  SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
            S       ++ +GDG  G+LG G++  +  P  V +   I   KVACG   ++ALT  G 
Sbjct: 4297 S------MVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGH 4350

Query: 540  VFSMGSADYGQLGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
            V++ G      +G P    +   R +    +   ++EDIA G+ H   +S+  +VY WG 
Sbjct: 4351 VYTFGQDRL--IGLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASGDVYAWGS 4408

Query: 598  GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + GQLG G   + + PTLV +L+ K V+ +  G   +AA
Sbjct: 4409 NSEGQLGLGHTNHVREPTLVTSLQGKSVRQISAGRCHSAA 4448



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 375 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVIST 422

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 423 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 482

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 483 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 540

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 541 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 587

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 588 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 647

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE  +    I DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 648 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 706

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 707 PITKPKKVSGLDGVAIQQISAGTSHSLA 734



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 154/292 (52%), Gaps = 23/292 (7%)

Query: 302  ACGSK-HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
            +CGS  H++ +T+ G++FSWG+G  GKLGHG       P+ I+AL G  +  ++CG  H+
Sbjct: 4178 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHS 4237

Query: 361  CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
              VT  G L+T+G+G  + G LG  +  +  +P +V+  +EG QI  + CG  HT  +++
Sbjct: 4238 AVVTADGKLFTFGNG--DYGRLGLGNTSNKKLPERVAA-LEGYQIGEVACGLNHTLVVST 4294

Query: 421  AGKL-FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G + + FGDG +G LG G+ ++ S P++V+ L         CG+     I +VA  T  
Sbjct: 4295 DGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDIL---------CGI----GIKKVACGTQF 4341

Query: 480  SNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
            S  L+    ++T+G      L  G A     P  V     +    +A G   T+AL+A+G
Sbjct: 4342 SVALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPALSGVFVEDIAVGAEHTLALSASG 4401

Query: 539  QVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSS 588
             V++ GS   GQLG  G T     PT +  +++ + +  I+ G  H A  SS
Sbjct: 4402 DVYAWGSNSEGQLGL-GHTNHVREPTLVT-SLQGKSVRQISAGRCHSAAWSS 4451



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 155/326 (47%), Gaps = 22/326 (6%)

Query: 317  IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
            +F WG G  G+L       VS P    + +      V CG+  T  +  +G +   G+G 
Sbjct: 4090 VFLWGAGRHGQLAEAGRNAVSPPP---SPSFCQAQQVICGQNCTFVIQANGTVLACGEG- 4145

Query: 377  HNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDGTFG 433
             + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG +G
Sbjct: 4146 -SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 4203

Query: 434  ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
             LGHG+      PR++E L+  + V  SCG  H+A +             +  KLFT+G+
Sbjct: 4204 KLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------ADGKLFTFGN 4251

Query: 494  GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYGQLG 552
            G  G+LG G+   + +P  V   +     +VACG + T+ ++  G  V++ G  DYG+LG
Sbjct: 4252 GDYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGKLG 4311

Query: 553  SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
               ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   N  
Sbjct: 4312 LGNSTAKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRARNHN 4371

Query: 613  TPTLVEALRDKQVKSVVCGSNFTAAI 638
             P  V AL    V+ +  G+  T A+
Sbjct: 4372 RPQQVPALSGVFVEDIAVGAEHTLAL 4397



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 138/276 (50%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D++ WG G H  G L +    +   P   S      Q   + CG   T  I + G +   
Sbjct: 4089 DVFLWGAGRH--GQLAEAGRNAVSPPPSPSF----CQAQQVICGQNCTFVIQANGTVLAC 4142

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 4143 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 4190

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +TA G++F+ G
Sbjct: 4191 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFG 4250

Query: 545  SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSK-SEVYTWGKGANGQ 602
            + DYG+LG    S  K P R+   ++   I ++ACG  H  VVS+  S V+ +G G  G+
Sbjct: 4251 NGDYGRLGLGNTSNKKLPERVAA-LEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDYGK 4309

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4310 LGLGNSTAKSSPQKVDILCGIGIKKVACGTQFSVAL 4345



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 438 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 495

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 496 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 544

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 545 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 601

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 602 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 658

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 659 KLIEELAATRIVDISIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 706

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D ++  +++ G S ++A TA
Sbjct: 707 PITKPKKVSGLDGVAIQQISAGTSHSLAWTA 737



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 409 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 468

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 469 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 516

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 517 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 572

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 573 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 632

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 633 STGQVYAWGCGACLGC 648



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 109/232 (46%), Gaps = 27/232 (11%)

Query: 413  WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
            WH   +     +F +G G  G L    R++ S P      +  + +   CG   T  I  
Sbjct: 4082 WH---LGGKCDVFLWGAGRHGQLAEAGRNAVSPPPSPSFCQAQQVI---CGQNCTFVI-- 4133

Query: 473  VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC-----G 527
                   +NG     +   G+G+ G+LG G+++   V   +         ++       G
Sbjct: 4134 ------QANG----TVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDG 4183

Query: 528  HSITIALTATGQVFSMGSADYGQLGSPGST-GKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
            HS+  ALT +G+VFS G  DYG+LG   S   + P +IE  ++   +  ++CG  H AVV
Sbjct: 4184 HSM--ALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVV 4240

Query: 587  SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            ++  +++T+G G  G+LG G+  NK+ P  V AL   Q+  V CG N T  +
Sbjct: 4241 TADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVV 4292


>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
            africana]
          Length = 4858

 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 199/389 (51%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3995 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4041

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4042 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4101

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4102 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4158

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+         S+G     ++ 
Sbjct: 4159 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV--------SSDG---SMVWA 4207

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4208 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4265

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4266 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4325

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 4326 NHVREPTLVTVLQGKNVRQISAGRCHSAA 4354



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIRKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3996 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4049

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4050 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4106

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4107 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4154

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A+++ G  V++ G  DYG
Sbjct: 4155 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYG 4214

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4215 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4274

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  +  L    ++ V  G+  T A+
Sbjct: 4275 NHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4303



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 139/278 (50%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      +P       +  Q+    CG   T  I + G + 
Sbjct: 3995 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFSQAQQV---ICGQNCTFVIQANGTVL 4046

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4047 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4096

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+
Sbjct: 4097 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4154

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+   ++   I  +ACG  H +AV S  S V+ +G G  
Sbjct: 4155 FGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDY 4213

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4214 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4251



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + ++ V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIRKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4284 VLAGVVIED---VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 4340

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 4341 NVRQISAGRCHSAAWT 4356


>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
          Length = 440

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/348 (32%), Positives = 185/348 (53%), Gaps = 18/348 (5%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK-QGQIFSWGEGSGGKLGHGVE 333
           ++   D  D L P  L +       S+ CG+ H V  ++ + +++SWG G  G+LGHG  
Sbjct: 46  QLGHGDAEDRLSPTQLSALDDHQIVSVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNS 105

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +D+  P  I AL+G  I  +ACG+ H  AVT+ G++ +WG   +  G LG        +P
Sbjct: 106 SDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGR--NQNGQLGLGDTEDSLVP 163

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           +K+    EG++I  +  G  HTAA+T  G L+ +G G +G LG GDR+   VP  V +  
Sbjct: 164 QKIQA-FEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAG 222

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
             K  M +CG  HT ++              S  L+T+G    GQLGHGD E  +VP  +
Sbjct: 223 GEKMSMVACGWRHTISVS------------YSGALYTYGWSKYGQLGHGDLEDHLVPHKL 270

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRY 572
           +   +    +++ G   T+ALT+ G+++  G   +GQ+G   +  +  P ++      + 
Sbjct: 271 EALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRIPDDQKV 330

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           ++ ++CG  H   V+ ++ V+ WG+G NGQLG G++ ++  P ++EAL
Sbjct: 331 VQ-VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNFPKIIEAL 377



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 169/340 (49%), Gaps = 18/340 (5%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+ G+ H+V +     + SWG G  G+LGHG   D   P  + AL+   I  V CG  HT
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDDHQIVSVTCGADHT 79

Query: 361 CAVTLS-GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
            A + S  ++Y+WG G  + G LG  +    + P  +   + G++I  I CG  H  A+T
Sbjct: 80  VAYSESRMEVYSWGWG--DFGRLGHGNSSDLFTPLPIKA-LHGIRIKQIACGDSHCLAVT 136

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G++ ++G    G LG GD   + VP++++  + ++  M + G  HTAA+ E       
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 189

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                   L+ WG G  G LG GD   R+VP  V  +       VACG   TI+++ +G 
Sbjct: 190 -----DGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGA 244

Query: 540 VFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           +++ G + YGQLG         P ++E  + +  I  I+ G  H   ++S  ++Y WG  
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLVPHKLEA-LGNSVISQISGGWRHTMALTSDGKLYGWGWN 303

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             GQ+G G+N ++ +P  V    D++V  V CG   T A+
Sbjct: 304 KFGQVGVGNNLDQCSPVQVRIPDDQKVVQVSCGWRHTLAV 343



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 67/119 (56%), Gaps = 3/119 (2%)

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYH 582
           ++ G S ++AL +   V S G  + GQLG   +  +  PT++     H+ +  + CG+ H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDDHQIVS-VTCGADH 78

Query: 583 -IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +A   S+ EVY+WG G  G+LGHG++ +  TP  ++AL   ++K + CG +   A+ +
Sbjct: 79  TVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 34/46 (73%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           ++CG +H + VT++  +F+WG G+ G+LG G   D ++PK+I+AL+
Sbjct: 333 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNFPKIIEALS 378


>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 3151

 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 195/357 (54%), Gaps = 20/357 (5%)

Query: 286  LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDA 344
            +P   E+   L+   +A GSK    VT +G++++ GE + G+LG G+ +  V  P+ + A
Sbjct: 1287 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVTA 1346

Query: 345  LNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
            L+   +  VA   G  H  A+T+ G +++WG+G  + G LG  S ++   PR +   ++ 
Sbjct: 1347 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKT 1403

Query: 403  LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
             +I  I CG  H+AA+TS+G+L+T+G G +G LGHGD ++   P+ V+ L   + V  +C
Sbjct: 1404 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVAC 1463

Query: 463  GVWHTAAIVEVAGKTSGSNGLSSKKL-FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
            G            + + +  L+ + L F+WGDG  G+LG G +E   +P  ++  +    
Sbjct: 1464 G-----------SRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 1512

Query: 522  CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGS 580
            C++ CG   ++ALT +G V++ G  DY +LG       + P  +EG ++ + I  +A G+
Sbjct: 1513 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 1571

Query: 581  YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             H   V+   +VY WG   +GQ G+G     + PTLV+ L  +++  V CGS+ + A
Sbjct: 1572 LHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 1628



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 190/391 (48%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 2258 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALAALRPVQLIGGEQTLFA 2307

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 2308 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 2367

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  S      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 2368 VYSWGEA--EDGKLGHGSRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 2424

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 2425 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVGIACG----------SGDAQTLCLTDDDTV 2474

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   +V CG   ++ALT  G V++ G  DY
Sbjct: 2475 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDY 2534

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G    + I  IA GS H    +   EVYTWG    GQLG G
Sbjct: 2535 HRLGH-GSDDHVRRPRQVQGLQGKKAIA-IATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 2592

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 2593 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 2623



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 106/318 (33%), Positives = 158/318 (49%), Gaps = 36/318 (11%)

Query: 334  ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLG---------- 383
            A +  P   + L+  N+  VA G     AVT+ G +Y  G+  +    LG          
Sbjct: 1283 AAIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPLPR 1342

Query: 384  QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
            QV+ +S ++ +KV+          +  G  H  A+T  GK+F++G+G  G LGH  R + 
Sbjct: 1343 QVTALSSYVVKKVA----------VHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNC 1392

Query: 444  SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
              PR +E LK  +    +CG  H+AA+             SS +L+TWG G  G+LGHGD
Sbjct: 1393 DKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYTWGLGEYGRLGHGD 1440

Query: 504  AEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQLGSPGSTG-KF 560
               ++ P  VKV       +VACG   + T+ALT  G VFS G  D+G+LG  GS G   
Sbjct: 1441 TTTQLKPKMVKVLLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNI 1500

Query: 561  PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
            P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG + + + P +VE L
Sbjct: 1501 PQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL 1559

Query: 621  RDKQVKSVVCGSNFTAAI 638
            R K++  V  G+    A+
Sbjct: 1560 RGKKIVHVAVGALHCLAV 1577



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 162/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 1309 LFAVTVEGKVYACGEATNGRLGLGLSSGTVPL-PRQVTALSSYVVKKVAVHSGGRHATAL 1367

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 1368 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 1415

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 1416 SAALTSSGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVACGSRDAQTLALTD 1475

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 1476 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 1532

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 1533 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 1580

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 1581 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 1630



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 130/279 (46%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 2259 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LAALRPVQLIGGEQTLFAVTADGKL 2314

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 2315 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 2363

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG   P   P  ++    I    VA G + +  +TA G +++
Sbjct: 2364 -SEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 2422

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR +  IACGS       ++    V++WG G 
Sbjct: 2423 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-GIACGSGDAQTLCLTDDDTVWSWGDGD 2481

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 2482 YGKLGRGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVAL 2520



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/207 (34%), Positives = 101/207 (48%), Gaps = 19/207 (9%)

Query: 439  DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEG 497
            D ++  VP   ETL  L              +V+VAG +     ++ + K++  G+   G
Sbjct: 1281 DLAAIKVPSFSETLSALN-------------VVQVAGGSKSLFAVTVEGKVYACGEATNG 1327

Query: 498  QLGHGDAEPRVVPLCVKVSDDISFC--KVAC--GHSITIALTATGQVFSMGSADYGQLGS 553
            +LG G +    VPL  +V+   S+   KVA   G     ALT  G+VFS G  D G+LG 
Sbjct: 1328 RLGLGLSS-GTVPLPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGH 1386

Query: 554  PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQT 613
                     R+   +K + I DIACGS H A ++S  E+YTWG G  G+LGHGD   +  
Sbjct: 1387 FSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLK 1446

Query: 614  PTLVEALRDKQVKSVVCGSNFTAAICL 640
            P +V+ L   +V  V CGS     + L
Sbjct: 1447 PKMVKVLLGHRVVQVACGSRDAQTLAL 1473



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 84/169 (49%), Gaps = 13/169 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  I          P+ +E         I CG++ ++ +T
Sbjct: 1477 GLVFSWGDGDFGKLGRGGSEGCNI----------PQNIERLNGQGVCQIECGAQFSLALT 1526

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT SG +Y W
Sbjct: 1527 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAW 1586

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+ 
Sbjct: 1587 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTTV 1632



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 2259 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQL------------IGGEQTLF 2306

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 2307 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 2366

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 2367 EVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 2426

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 2427 RYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCL 2468


>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
          Length = 4285

 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 195/357 (54%), Gaps = 20/357 (5%)

Query: 286  LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDA 344
            +P   E+   L+   +A GSK    VT +G++++ GE + G+LG G+ +  V  P+ + A
Sbjct: 2686 VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQVTA 2745

Query: 345  LNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
            L+   +  VA   G  H  A+T+ G +++WG+G  + G LG  S ++   PR +   ++ 
Sbjct: 2746 LSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG--DDGKLGHFSRMNCDKPRLIEA-LKT 2802

Query: 403  LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
             +I  I CG  H+AA+TS+G+L+T+G G +G LGHGD ++   P+ V+ L   + +  +C
Sbjct: 2803 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 2862

Query: 463  GVWHTAAIVEVAGKTSGSNGLSSKKL-FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
            G            + + +  L+ + L F+WGDG  G+LG G +E   VP  ++  +    
Sbjct: 2863 G-----------SRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGV 2911

Query: 522  CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGS 580
            C++ CG   ++ALT +G V++ G  DY +LG       + P  +EG ++ + I  +A G+
Sbjct: 2912 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 2970

Query: 581  YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             H   V+   +VY WG   +GQ G+G     + PTLV+ L  +++  V CGS+ + A
Sbjct: 2971 LHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3027



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 184/383 (48%), Gaps = 38/383 (9%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
           L    IAC  K  +++++ G++++              +D   P+L+  L   NI  +A 
Sbjct: 452 LGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLASRNIVKIAA 501

Query: 356 GE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQMEGLQISSICC 410
                H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  G  +  I C
Sbjct: 502 HSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIAC 559

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
           G  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +CG       
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG------- 612

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
              +G         + ++++WGDG  G+LG G ++    P  ++   D+   KV CG   
Sbjct: 613 ---SGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 669

Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
           ++ALT  GQV+S G  D  +LG       ++P  +E  ++ + + D+A GS H   ++  
Sbjct: 670 SVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEA-LQGKKVIDVAAGSTHCLALTED 728

Query: 590 SEVYTWGKGANGQLGHGD--NENKQTPTLVEALRDKQVKSVVCG--SNFTAAICLHKGVS 645
           SEV++WG   N Q  H D  ++ K  P+L+  L  K +  + CG   +F  + C    V 
Sbjct: 729 SEVHSWGN--NDQCQHFDTLHQTKPEPSLLPGLDTKHIVGIACGPAQSFAWSSCSEWSVG 786

Query: 646 IADH---SICSGCRNQFNFRRRR 665
           +       +CSG   Q +   R+
Sbjct: 787 LRVPFVVDVCSGTFEQLDLLLRQ 809



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 105/317 (33%), Positives = 158/317 (49%), Gaps = 36/317 (11%)

Query: 335  DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLG----------Q 384
            ++  P   + L+  N+  VA G     AVT+ G +Y  G+  +    LG          Q
Sbjct: 2683 EIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQ 2742

Query: 385  VSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS 444
            V+ +S ++ +KV+          +  G  H  A+T  GK+F++G+G  G LGH  R +  
Sbjct: 2743 VTALSSYVVKKVA----------VHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCD 2792

Query: 445  VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA 504
             PR +E LK  +    +CG  H+AA+             SS +L+TWG G  G+LGHGD 
Sbjct: 2793 KPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYTWGLGEYGRLGHGDN 2840

Query: 505  EPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQLGSPGSTG-KFP 561
              ++ P  VKV       +VACG   + T+ALT  G VFS G  D+G+LG  GS G   P
Sbjct: 2841 TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVP 2900

Query: 562  TRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALR 621
              IE  +  + +  I CG+     ++    V+TWGKG   +LGHG + + + P +VE LR
Sbjct: 2901 QNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLR 2959

Query: 622  DKQVKSVVCGSNFTAAI 638
             K++  V  G+    A+
Sbjct: 2960 GKKIVHVAVGALHCLAV 2976



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 163/379 (43%), Gaps = 79/379 (20%)

Query: 315  GQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G I+ WG    G+LG G+E A V  P   +AL       +  GE    AVT  G LY  G
Sbjct: 3631 GTIYGWGHNHRGQLG-GIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATG 3689

Query: 374  ---------DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
                      G  ++     +  I H   RKV+          +  G  H  A++S G++
Sbjct: 3690 YGAGGRLGVGGTESVSAPTLLESIQHVFIRKVA----------VNSGGKHCLALSSEGEV 3739

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
            +++G+   G LGHG+RS    PR VE+L+  + V  + G  H+A +             S
Sbjct: 3740 YSWGEAEDGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVT------------S 3787

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFS 542
            +  L+TWG G  G+LGH D+E ++ P  V+         VACG   + T+ LT    V+S
Sbjct: 3788 AGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTDDDTVWS 3847

Query: 543  MGSADYGQLGSPGSTG-KFPTRIEGNIK----------------------HRY------- 572
             G  DYG+LG  GS G K P ++  +++                      HR        
Sbjct: 3848 WGDGDYGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYHRLGHGSDDH 3907

Query: 573  --------------IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
                          +  IA GS H    + + EVYTWG    GQLG G     Q P LV 
Sbjct: 3908 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQRPRLVA 3967

Query: 619  ALRDKQVKSVVCGSNFTAA 637
            AL+ ++V  V CGS  T A
Sbjct: 3968 ALQGRKVNRVACGSAHTLA 3986



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 161/350 (46%), Gaps = 30/350 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 2708 LFAVTVEGKVYACGEATNGRLGLGMSSGTVPI-PRQVTALSSYVVKKVAVHSGGRHATAL 2766

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 2767 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 2814

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 2815 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 2874

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       +P+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 2875 EGLVFSWGDG--DFGKLGRGGSEGCNVPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 2931

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +             
Sbjct: 2932 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAG----------- 2980

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 2981 -QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3029



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 135/300 (45%), Gaps = 27/300 (9%)

Query: 287  PKVLEST--VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
            P +LES   V +   ++  G KH + ++ +G+++SWGE   GKLGHG  +    P+++++
Sbjct: 3707 PTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVES 3766

Query: 345  LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
            L G+ +  +A G  H+  VT +GDLYTWG G +  G LG         P+ V   ++G +
Sbjct: 3767 LRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRY--GRLGHSDSEDQLKPKLVEA-LQGHR 3823

Query: 405  ISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
            +  + CG     T  +T    ++++GDG +G LG G      VP +V     +       
Sbjct: 3824 VVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGRPSTPP 3883

Query: 463  GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
              W                     +L   G G   +LGHG  +    P  V+        
Sbjct: 3884 PSW--------------------PRLDVGGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 3923

Query: 523  KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
             +A G    +  T  G+V++ G  D GQLG   +      R+   ++ R +  +ACGS H
Sbjct: 3924 AIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGRKVNRVACGSAH 3983



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 141/303 (46%), Gaps = 31/303 (10%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 555

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 556 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 612

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+    AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 613 SGDAQPLAVTDNGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 669

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E  
Sbjct: 670 SVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTE-- 727

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQ----LGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
                       ++ +WG+  + Q    L     EP ++P      D      +ACG + 
Sbjct: 728 ----------DSEVHSWGNNDQCQHFDTLHQTKPEPSLLPGL----DTKHIVGIACGPAQ 773

Query: 531 TIA 533
           + A
Sbjct: 774 SFA 776



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/176 (36%), Positives = 93/176 (52%), Gaps = 6/176 (3%)

Query: 470  IVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC--KVAC 526
            +V+VAG +     ++ + K++  G+   G+LG G +    VP+  +V+   S+   KVA 
Sbjct: 2698 VVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGMSS-GTVPIPRQVTALSSYVVKKVAV 2756

Query: 527  --GHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIA 584
              G     ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A
Sbjct: 2757 HSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 2816

Query: 585  VVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
             ++S  E+YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 2817 ALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 2872



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 57/170 (33%), Positives = 85/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ +V +T
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSVALT 674

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++AL G  +  VA G  H  A+T   ++++W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L Q       +P      ++   I  I CGP  + A +S
Sbjct: 735 GNNDQCQHFDTLHQTKPEPSLLP-----GLDTKHIVGIACGPAQSFAWSS 779



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/228 (31%), Positives = 112/228 (49%), Gaps = 14/228 (6%)

Query: 415  TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            T +   +G ++ +G    G LG  + +   VP   E L  L+ V              + 
Sbjct: 3624 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IG 3671

Query: 475  GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITI 532
            G+ +     +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +
Sbjct: 3672 GEQTLFAVTADGKLYATGYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCL 3731

Query: 533  ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
            AL++ G+V+S G A+ G+LG    +     R+  +++   + DIA G  H A V+S  ++
Sbjct: 3732 ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDL 3791

Query: 593  YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            YTWGKG  G+LGH D+E++  P LVEAL+  +V  V CGS     +CL
Sbjct: 3792 YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 3839



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 55/168 (32%), Positives = 84/168 (50%), Gaps = 13/168 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WG+G    L  G   G  +          P+ +E         I CG++ ++ +T
Sbjct: 2876 GLVFSWGDGDFGKLGRGGSEGCNV----------PQNIERLNGQGVCQIECGAQFSLALT 2925

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            K G +++WG+G   +LGHG +  V  P++++ L G  I  VA G  H  AVT +G +Y W
Sbjct: 2926 KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAW 2985

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            GD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+
Sbjct: 2986 GDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 3030



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 23/258 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3630 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 3685

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   ++ V  + G  H  A+            
Sbjct: 3686 YATGYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALS----------- 3734

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  V+         +A G + +  +T+ G +++
Sbjct: 3735 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYT 3793

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + D+ACGS       ++    V++WG G 
Sbjct: 3794 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DVACGSGDAQTLCLTDDDTVWSWGDGD 3852

Query: 600  NGQLGHGDNENKQTPTLV 617
             G+LG G ++  + P  V
Sbjct: 3853 YGKLGRGGSDGCKVPMKV 3870



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 42/67 (62%)

Query: 300  SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
            +IA GS H V  T++G++++WG+   G+LG G    +  P+L+ AL G  ++ VACG  H
Sbjct: 3924 AIATGSLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGRKVNRVACGSAH 3983

Query: 360  TCAVTLS 366
            T A + S
Sbjct: 3984 TLAWSTS 3990


>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
            mulatta]
          Length = 4824

 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3961 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4007

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4008 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4067

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4068 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4124

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4125 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4173

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  + V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4174 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4231

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4232 IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4291

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 4292 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4320



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G           +   L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGT----------QEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE  +    I D++ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 159/330 (48%), Gaps = 30/330 (9%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3962 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4015

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4016 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4072

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4073 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4120

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4121 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4180

Query: 550  QLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +LG   ST K  P +I+  +    I+ +ACG+     ++    VYT+G+     L  G  
Sbjct: 4181 KLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4239

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             N   P  +  L    ++ V  G+  T A+
Sbjct: 4240 RNHNRPQQIPVLAGMIIEDVAVGAEHTLAL 4269



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 139/278 (50%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      +P       +  Q+    CG   T  I + G + 
Sbjct: 3961 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFSQAQQV---ICGQNCTFVIQANGTVL 4012

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4013 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4062

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+
Sbjct: 4063 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4120

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  
Sbjct: 4121 FGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4179

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  ++ L    +K V CG+ F+ A+
Sbjct: 4180 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4217



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   ++ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4250 VLAGMIIED---VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGK 4306

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 4307 NVRQISAGRCHSAAWT 4322


>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4846

 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3983 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4029

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4030 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4089

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4090 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4146

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4147 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4195

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  + V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4196 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4253

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4254 IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4313

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 4314 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4342



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + D++ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 159/330 (48%), Gaps = 30/330 (9%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3984 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4037

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4038 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4094

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4095 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4142

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4143 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4202

Query: 550  QLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +LG   ST K  P +I+  +    I+ +ACG+     ++    VYT+G+     L  G  
Sbjct: 4203 KLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4261

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             N   P  +  L    ++ V  G+  T A+
Sbjct: 4262 RNHNRPQQIPVLAGMIIEDVAVGAEHTLAL 4291



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 139/278 (50%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      +P       +  Q+    CG   T  I + G + 
Sbjct: 3983 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFSQAQQV---ICGQNCTFVIQANGTVL 4034

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4035 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4084

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+
Sbjct: 4085 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4142

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  
Sbjct: 4143 FGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4201

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  ++ L    +K V CG+ F+ A+
Sbjct: 4202 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4239



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   ++ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4272 VLAGMIIED---VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGK 4328

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 4329 NVRQISAGRCHSAAWT 4344


>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
          Length = 4850

 Score =  183 bits (465), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3987 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4033

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4034 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4093

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4094 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4150

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4151 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4199

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4200 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4257

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4258 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4317

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 4318 NHVREPTLVTVLQGKNVRQISAGRCHSAA 4346



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3988 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4041

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4042 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4098

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4099 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4146

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4147 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4206

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4207 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4266

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  +  L    ++ V  G+  T A+
Sbjct: 4267 NHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4295



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 139/278 (50%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      +P       +  Q+    CG   T  I + G + 
Sbjct: 3987 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFSQAQQV---ICGQNCTFVIQANGTVL 4038

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4039 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4088

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+
Sbjct: 4089 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4146

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  
Sbjct: 4147 FGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4205

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4206 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4243



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4276 VLAGVVIED---VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 4332

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 4333 NVRQISAGRCHSAAWT 4348


>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4854

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3991 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4037

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4038 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4097

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4098 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4154

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4155 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4203

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  + V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4204 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4261

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4262 IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4321

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 4322 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4350



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + D++ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 159/330 (48%), Gaps = 30/330 (9%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3992 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4045

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4046 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4102

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4103 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4150

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4151 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4210

Query: 550  QLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +LG   ST K  P +I+  +    I+ +ACG+     ++    VYT+G+     L  G  
Sbjct: 4211 KLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4269

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             N   P  +  L    ++ V  G+  T A+
Sbjct: 4270 RNHNRPQQIPVLAGMIIEDVAVGAEHTLAL 4299



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 139/278 (50%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      +P       +  Q+    CG   T  I + G + 
Sbjct: 3991 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFSQAQQV---ICGQNCTFVIQANGTVL 4042

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4043 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4092

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+
Sbjct: 4093 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4150

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  
Sbjct: 4151 FGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4209

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  ++ L    +K V CG+ F+ A+
Sbjct: 4210 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4247



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   ++ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4280 VLAGMIIED---VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGK 4336

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 4337 NVRQISAGRCHSAAWT 4352


>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4854

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 197/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3991 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4037

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4038 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4097

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4098 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4154

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+            +    ++ 
Sbjct: 4155 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SVDGSMVWA 4203

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  + V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4204 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4261

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4262 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4321

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 4322 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4350



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + D++ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 158/330 (47%), Gaps = 30/330 (9%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3992 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4045

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4046 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4102

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4103 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4150

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++  G  V++ G  DYG
Sbjct: 4151 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYG 4210

Query: 550  QLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +LG   ST K  P +I+  +    I+ +ACG+     ++    VYT+G+     L  G  
Sbjct: 4211 KLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4269

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             N   P  +  L    ++ V  G+  T A+
Sbjct: 4270 RNHNRPQQIPVLAGVIIEDVAVGAEHTLAL 4299



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 137/276 (49%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG G H     GQ++E    +    +      Q   + CG   T  I + G +   
Sbjct: 3991 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLAC 4044

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 4045 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 4092

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+ G
Sbjct: 4093 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4152

Query: 545  SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQ 602
            + DYG+LG    S  K P R+   ++   I  +ACG  H +AV    S V+ +G G  G+
Sbjct: 4153 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGK 4211

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G++  K +P  ++ L    +K V CG+ F+ A+
Sbjct: 4212 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4247



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   ++ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4280 VLAGVIIED---VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGK 4336

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 4337 NVRQISAGRCHSAAWT 4352


>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan paniscus]
          Length = 4798

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 197/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3935 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 3981

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 3982 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4041

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4042 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4098

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+            +    ++ 
Sbjct: 4099 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SVDGSMVWA 4147

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  + V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4148 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4205

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4206 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4265

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 4266 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4294



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G           +   L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGT----------QEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + D++ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 158/330 (47%), Gaps = 30/330 (9%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3936 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 3989

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 3990 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4046

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4047 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4094

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++  G  V++ G  DYG
Sbjct: 4095 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYG 4154

Query: 550  QLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +LG   ST K  P +I+  +    I+ +ACG+     ++    VYT+G+     L  G  
Sbjct: 4155 KLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4213

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             N   P  +  L    ++ V  G+  T A+
Sbjct: 4214 RNHNRPQQIPVLAGVIIEDVAVGAEHTLAL 4243



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 137/276 (49%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG G H     GQ++E    +    +      Q   + CG   T  I + G +   
Sbjct: 3935 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLAC 3988

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 3989 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 4036

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+ G
Sbjct: 4037 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4096

Query: 545  SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQ 602
            + DYG+LG    S  K P R+   ++   I  +ACG  H +AV    S V+ +G G  G+
Sbjct: 4097 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGK 4155

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G++  K +P  ++ L    +K V CG+ F+ A+
Sbjct: 4156 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4191



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   ++ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4224 VLAGVIIED---VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGK 4280

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 4281 NVRQISAGRCHSAAWT 4296


>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4861

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3998 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4044

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4105 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4210

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  + V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4268

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4328

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 4329 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4357



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + D++ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 159/330 (48%), Gaps = 30/330 (9%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4052

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4053 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4157

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4217

Query: 550  QLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +LG   ST K  P +I+  +    I+ +ACG+     ++    VYT+G+     L  G  
Sbjct: 4218 KLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             N   P  +  L    ++ V  G+  T A+
Sbjct: 4277 RNHNRPQQIPVLAGMIIEDVAVGAEHTLAL 4306



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 138/276 (50%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG G H     GQ++E    +    +      Q   + CG   T  I + G +   
Sbjct: 3998 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLAC 4051

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 4099

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+ G
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159

Query: 545  SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQ 602
            + DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  G+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4218

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G++  K +P  ++ L    +K V CG+ F+ A+
Sbjct: 4219 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   ++ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4287 VLAGMIIED---VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGK 4343

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 4344 NVRQISAGRCHSAAWT 4359


>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
            domestica]
          Length = 4790

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 197/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A   V I +A            +     AQ + CG     ++  
Sbjct: 3927 DVYLWGAG-RHGQLAEAGRNVMIPAA------------APSFSQAQQVICGQNCTFVIQA 3973

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 3974 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4033

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4034 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVIQMSCGFKHSAVVTSDGKLFTFGNG 4090

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4091 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4139

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4140 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4197

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IEDIA G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4198 IGLPEGRARNHNRPQQIPVLAGVVIEDIAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4257

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTL+  L+ K ++ +  G   +AA
Sbjct: 4258 NHVREPTLITILQGKNIRQISAGRCHSAA 4286



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G           +   L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGT----------QEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGVAIQQISAGTSHSLA 732



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3928 VYLWGAGRHGQLAEAGRNVMIPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 3981

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 3982 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4038

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + +  SCG  H+A +             S  KLFT
Sbjct: 4039 DYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVT------------SDGKLFT 4086

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4087 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4146

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4147 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4206

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  +  L    ++ +  G+  T A+
Sbjct: 4207 NHNRPQQIPVLAGVVIEDIAVGAEHTLAL 4235



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 139/278 (50%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      IP       +  Q+    CG   T  I + G + 
Sbjct: 3927 DVYLWGAGRH-----GQLAEAGRNVMIPAAAPSFSQAQQV---ICGQNCTFVIQANGTVL 3978

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 3979 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4028

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+
Sbjct: 4029 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFT 4086

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  
Sbjct: 4087 FGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4145

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4146 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4183



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D ++  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGVAIQQISAGTSHSLAWTA 735



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   IA G++H + +   G +++WG  S G+LG G    V  P LI  L G 
Sbjct: 4216 VLAGVVIED---IAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITILQGK 4272

Query: 349  NIHMVACGEFHTCAVTLS 366
            NI  ++ G  H+ A T S
Sbjct: 4273 NIRQISAGRCHSAAWTAS 4290


>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4853

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3990 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4036

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4037 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4096

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4097 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4153

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4154 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4202

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  + V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4203 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4260

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4261 IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4320

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 4321 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4349



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + D++ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 159/330 (48%), Gaps = 30/330 (9%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3991 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4044

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4045 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4101

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4102 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4149

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4150 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4209

Query: 550  QLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +LG   ST K  P +I+  +    I+ +ACG+     ++    VYT+G+     L  G  
Sbjct: 4210 KLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4268

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             N   P  +  L    ++ V  G+  T A+
Sbjct: 4269 RNHNRPQQIPVLAGMIIEDVAVGAEHTLAL 4298



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 139/278 (50%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      +P       +  Q+    CG   T  I + G + 
Sbjct: 3990 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFSQAQQV---ICGQNCTFVIQANGTVL 4041

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4042 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4091

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+
Sbjct: 4092 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4149

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  
Sbjct: 4150 FGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4208

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  ++ L    +K V CG+ F+ A+
Sbjct: 4209 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4246



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   ++ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4279 VLAGMIIED---VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGK 4335

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 4336 NVRQISAGRCHSAAWT 4351


>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
          Length = 4836

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 205/388 (52%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2962 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G+++S GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I  G  H+A +TS+G+L+T+G G 
Sbjct: 3072 WGEG--DDGKLGHFSRMNCDKPRLIQA-LKTKRIRDIAYGSSHSAPLTSSGELYTWGLGE 3128

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3177

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3178 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3237

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3238 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3296

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3297 VNRKPTLVQGLEGQKITRVACGSSHSVA 3324



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3952 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 4001

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4002 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4061

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 4062 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4118

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + +  +CG          +G            +
Sbjct: 4119 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG----------SGDAQTLCLTDDDTV 4168

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4169 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4228

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4229 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4286

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4287 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 188/394 (47%), Gaps = 42/394 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    +AC  K  +++++ G++++              +D+  P+L+  L 
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLAPQLVQGLA 492

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 611 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 717

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG--SNF 634
           GS H  V++  SEV++W  G+N Q  H D     K  PT    L  K +  + CG   +F
Sbjct: 718 GSTHCLVLTEDSEVHSW--GSNDQCQHFDTLGVTKPEPTAFPGLDSKHIVGIACGPAQSF 775

Query: 635 TAAICLHKGVSIADH---SICSGCRNQFNFRRRR 665
             + C    + +       ICS    Q +   R+
Sbjct: 776 AWSSCSEWSIGLRVPFVVDICSMTFEQLDLLLRQ 809



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 167/340 (49%), Gaps = 36/340 (10%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y+
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 3016

Query: 372  WGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
             G+  +    LG          Q++ +S ++ +KV+          +  G  H  A+T  
Sbjct: 3017 CGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVA----------VHSGGRHATALTVD 3066

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            GK+F++G+G  G LGH  R +   PR ++ LK  +    + G  H+A +           
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLT---------- 3116

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
              SS +L+TWG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G 
Sbjct: 3117 --SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 540  VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            VFS G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3233

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               +LGHG + + + P +VE LR K++  V  G+    A+
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 161/324 (49%), Gaps = 34/324 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  VAC E     ++ +G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQA-- 477

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
            +N  +L          P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 478 -YNSDMLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 527 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 578 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 638 LGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 696

Query: 610 NKQTPTLVEALRDKQVKSVVCGSN 633
           + + P L+E L+ K+V  V  GS 
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGST 720



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 162/352 (46%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y+  E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 3005 LFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3063

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++++      + IA GS H
Sbjct: 3064 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIQALKTKRIRDIAYGSSH 3111

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3112 SAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3172 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3228

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3276

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3277 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3328



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 146/314 (46%), Gaps = 32/314 (10%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 555

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 556 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 612

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQF 669

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H   + E  
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTE-- 727

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQ----LGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
                       ++ +WG   + Q    LG    EP   P      D      +ACG + 
Sbjct: 728 ----------DSEVHSWGSNDQCQHFDTLGVTKPEPTAFPGL----DSKHIVGIACGPAQ 773

Query: 531 TIALTATGQVFSMG 544
           + A ++  + +S+G
Sbjct: 774 SFAWSSCSE-WSIG 786



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3953 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4008

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4009 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4057

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 4058 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4116

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR I DIACGS       ++    V++WG G 
Sbjct: 4117 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI-DIACGSGDAQTLCLTDDDTVWSWGDGD 4175

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4214



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 107/230 (46%), Gaps = 19/230 (8%)

Query: 415  TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            TA I +  K+F +G      LG    S   VP   ETL  L              +V+VA
Sbjct: 2955 TATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVA 2999

Query: 475  GKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSI 530
            G +     ++ + K+++ G+   G+LG G +   V +P  +         KVA   G   
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059

Query: 531  TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
              ALT  G+VFS G  D G+LG          R+   +K + I DIA GS H A ++S  
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSG 3119

Query: 591  EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            E+YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3120 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 4000

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 4001 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4162


>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
          Length = 4859

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3996 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4042

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4103 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4208

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4266

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4267 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4326

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 4327 NHVREPTLVTVLQGKNVRQISAGRCHSAA 4355



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G           +   L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGT----------QEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4050

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4051 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4107

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4108 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4155

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4156 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4215

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4216 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4275

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  +  L    ++ V  G+  T A+
Sbjct: 4276 NHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4304



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 139/278 (50%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      +P       +  Q+    CG   T  I + G + 
Sbjct: 3996 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFSQAQQV---ICGQNCTFVIQANGTVL 4047

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4048 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4097

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+
Sbjct: 4098 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4155

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  
Sbjct: 4156 FGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4214

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4215 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4252



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4285 VLAGVVIED---VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 4341

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 4342 NVRQISAGRCHSAAWT 4357


>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
          Length = 4746

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 205/388 (52%), Gaps = 30/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2872 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 2921

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G+++S GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 2922 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 2981

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I  G  H+A +TS+G+L+T+G G 
Sbjct: 2982 WGEG--DDGKLGHFSRMNCDKPRLIQA-LKTKRIRDIAYGSSHSAPLTSSGELYTWGLGE 3038

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3039 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3087

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G  DY +
Sbjct: 3088 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3147

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG       + P  +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G   
Sbjct: 3148 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3206

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              + PTLV+ L  +++  V CGS+ + A
Sbjct: 3207 VNRKPTLVQGLEGQKITRVACGSSHSVA 3234



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3862 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 3911

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 3912 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 3971

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 3972 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4028

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + +  +CG          +G            +
Sbjct: 4029 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG----------SGDAQTLCLTDDDTV 4078

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4079 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4138

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4139 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4196

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4197 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4227



 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 175/355 (49%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    +AC  K  +++++ G++++              +D+  P+L+  L 
Sbjct: 353 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLAPQLVQGLA 402

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 403 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 460

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 461 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 520

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 521 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 568

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 569 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 627

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H  V++  SEV++W  G+N Q  H D     K  PT    L  K +  + CG
Sbjct: 628 GSTHCLVLTEDSEVHSW--GSNDQCQHFDTLGVTKPEPTAFPGLDSKHIVGIACG 680



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 167/340 (49%), Gaps = 36/340 (10%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y+
Sbjct: 2867 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 2926

Query: 372  WGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
             G+  +    LG          Q++ +S ++ +KV+          +  G  H  A+T  
Sbjct: 2927 CGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVA----------VHSGGRHATALTVD 2976

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            GK+F++G+G  G LGH  R +   PR ++ LK  +    + G  H+A +           
Sbjct: 2977 GKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLT---------- 3026

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
              SS +L+TWG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G 
Sbjct: 3027 --SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3084

Query: 540  VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            VFS G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG
Sbjct: 3085 VFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3143

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               +LGHG + + + P +VE LR K++  V  G+    A+
Sbjct: 3144 DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3183



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 161/324 (49%), Gaps = 34/324 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  VAC E     ++ +G +YT    
Sbjct: 335 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQA-- 387

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
            +N  +L          P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 388 -YNSDMLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 436

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 437 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 487

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 488 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 547

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 548 LGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 606

Query: 610 NKQTPTLVEALRDKQVKSVVCGSN 633
           + + P L+E L+ K+V  V  GS 
Sbjct: 607 HVRYPKLLEGLQGKKVIDVAAGST 630



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 162/352 (46%), Gaps = 30/352 (8%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
            + + T   K Y+  E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 2915 LFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 2973

Query: 248  DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
              DG   VF WGEG  +G LG            R +   P+++++      + IA GS H
Sbjct: 2974 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIQALKTKRIRDIAYGSSH 3021

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
            +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 3022 SAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3081

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 3082 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3138

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            T+G G +  LGHG       P+ VE L+  K V  + G  H  A+ +            S
Sbjct: 3139 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3186

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +++ WGD   GQ G+G       P  V+  +     +VACG S ++A T  
Sbjct: 3187 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3238



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 146/314 (46%), Gaps = 32/314 (10%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 409 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 465

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 466 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 522

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 523 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQF 579

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H   + E  
Sbjct: 580 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTE-- 637

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQ----LGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
                       ++ +WG   + Q    LG    EP   P      D      +ACG + 
Sbjct: 638 ----------DSEVHSWGSNDQCQHFDTLGVTKPEPTAFPGL----DSKHIVGIACGPAQ 683

Query: 531 TIALTATGQVFSMG 544
           + A ++  + +S+G
Sbjct: 684 SFAWSSCSE-WSIG 696



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 98/178 (55%), Gaps = 9/178 (5%)

Query: 470 IVEVAGKTSGSNGLS---SKKLFTWGDGAEGQLGHGDA----EPRVVPLCVKVSDDISFC 522
           IV++A  + G + L+   + ++++WG G  G+LGHGD     EP+V+             
Sbjct: 406 IVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVV 465

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS-- 580
            +ACG + + A+TA G++++ G  +YG+LG   S  +    +   +K   + D+ACGS  
Sbjct: 466 HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGD 525

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
                V+   +V++WG G  G+LG G ++  +TP L+E L+D  V  V CGS F+ A+
Sbjct: 526 AQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIAL 583



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3863 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 3918

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 3919 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 3967

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 3968 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4026

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR I DIACGS       ++    V++WG G 
Sbjct: 4027 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI-DIACGSGDAQTLCLTDDDTVWSWGDGD 4085

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4086 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4124



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 107/230 (46%), Gaps = 19/230 (8%)

Query: 415  TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            TA I +  K+F +G      LG    S   VP   ETL  L              +V+VA
Sbjct: 2865 TATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVA 2909

Query: 475  GKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSI 530
            G +     ++ + K+++ G+   G+LG G +   V +P  +         KVA   G   
Sbjct: 2910 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 2969

Query: 531  TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
              ALT  G+VFS G  D G+LG          R+   +K + I DIA GS H A ++S  
Sbjct: 2970 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSG 3029

Query: 591  EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            E+YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3030 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3079



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3863 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 3910

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3911 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3970

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 3971 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4030

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4031 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4072


>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Felis catus]
          Length = 4861

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3998 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4044

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4105 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4210

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4268

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4328

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 4329 NHVREPTLVTVLQGKNVRQISAGRCHSAA 4357



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  V+    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4052

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4053 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4157

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4217

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4218 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4277

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  +  L    ++ V  G+  T A+
Sbjct: 4278 NHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4306



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 139/278 (50%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      +P       +  Q+    CG   T  I + G + 
Sbjct: 3998 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFSQAQQV---ICGQNCTFVIQANGTVL 4049

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4099

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+
Sbjct: 4100 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4157

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4216

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4217 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4254



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P+ V   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKPKVVEA-LQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P +VEAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4287 VLAGVVIED---VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 4343

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 4344 NVRQISAGRCHSAAWT 4359


>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Ailuropoda melanoleuca]
          Length = 4861

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3998 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4044

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4105 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4210

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4268

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4328

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 4329 NHVREPTLVTVLQGKNVRQISAGRCHSAA 4357



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  V+    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE  +    I DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4052

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4053 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4157

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4217

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4218 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4277

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  +  L    ++ V  G+  T A+
Sbjct: 4278 NHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4306



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 139/278 (50%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      +P       +  Q+    CG   T  I + G + 
Sbjct: 3998 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFSQAQQV---ICGQNCTFVIQANGTVL 4049

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4099

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+
Sbjct: 4100 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4157

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4216

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4217 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4254



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P+ V   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKPKVVEA-LQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P +VEAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4287 VLAGVVIED---VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 4343

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 4344 NVRQISAGRCHSAAWT 4359


>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Metaseiulus occidentalis]
          Length = 4496

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 120/387 (31%), Positives = 204/387 (52%), Gaps = 31/387 (8%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I          PK  E    L   +IA GSK   +V+  
Sbjct: 2654 VFVWGLNDKDQL--GGLKGSKIKE--------PKFSEVISNLKPMNIAGGSKSLFIVSHD 2703

Query: 315  GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTW 372
            G++F+ GEG+ G+LG G   +V+ PK +  L+   I  VA   G  H  A+T+ G +++W
Sbjct: 2704 GKVFACGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSW 2763

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            G+G    G LG  ++IS+  P+ V   ++  +I  + CG  H+AA+TS+G+L+T+G G +
Sbjct: 2764 GEG--EDGKLGHGNKISYDRPKLVES-LKCKRIRDVACGSSHSAAVTSSGELYTWGSGEY 2820

Query: 433  GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK-LFTW 491
            G LGHGD      P++V  L   + V  +CG            + + +  L+ +  +++W
Sbjct: 2821 GRLGHGDNVPQLKPKQVRALSHERVVQVACG-----------SRDAQTLALTERHWVYSW 2869

Query: 492  GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
            GDG  G+LG G ++   +P  V+  +     +V CG   ++AL+  G+V++ G  DY +L
Sbjct: 2870 GDGDFGKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFRL 2929

Query: 552  G-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            G    S  ++P  +E  +  + +  ++ G+ H   V+ + EVY WG   +GQ G+G+   
Sbjct: 2930 GHGSDSHVRWPQVVE-ELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDHGQQGNGNTTV 2988

Query: 611  KQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + P +V  L  + + +V CGS+ + A
Sbjct: 2989 NRKPAIVRGL--EAITNVACGSSHSVA 3013



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 128/391 (32%), Positives = 195/391 (49%), Gaps = 28/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G +  WG     G LGG V G ++ +A   DAL          L    I  G +    
Sbjct: 3617 GSGVIHGWGHN-HRGQLGG-VEGAKVKTATICDAL--------TALRPVQIVGGEQTLFA 3666

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            +T  G++++ G G+GG+LG G    VS P LI+ L    +  VA   G  H  A+T SGD
Sbjct: 3667 LTSDGKVYATGYGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSSGD 3726

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +++WG+G  + G LG  S+     P+ +   +    + S+ CG  H+A IT++G+L+T+G
Sbjct: 3727 VFSWGEG--DDGKLGHGSKALCERPKLIES-LRDKHVVSVACGGAHSACITASGELYTWG 3783

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGHGD      P++VE L     +  +CG      +          +GL    +
Sbjct: 3784 KGRYGRLGHGDSEDQLKPKKVEELAGHNVLDVACGSGDAQTLC------VSRDGL----V 3833

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++    P  +    +    KV CG   ++ALTA G V++ G  DY
Sbjct: 3834 WSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDY 3893

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P  ++G ++ + +  +A GS H    +   EV+TWG    GQLG G
Sbjct: 3894 HRLGH-GSEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEVFTWGDNDEGQLGDG 3952

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV +L+ K++  V CGS  T +
Sbjct: 3953 STNAIQRPKLVASLKGKKMNRVACGSAHTVS 3983



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 124/383 (32%), Positives = 182/383 (47%), Gaps = 48/383 (12%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE--STVVLDAQSIACGSKHAVL 310
            G VF  GEG  NG LG              +   PK L   S   +   ++  G +HA+ 
Sbjct: 2704 GKVFACGEG-TNGRLG---------LGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALA 2753

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
            +T  G++FSWGEG  GKLGHG +     PKL+++L    I  VACG  H+ AVT SG+LY
Sbjct: 2754 LTIDGRVFSWGEGEDGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGELY 2813

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFG 428
            TWG G    G LG    +    P++V   +   ++  + CG     T A+T    ++++G
Sbjct: 2814 TWGSG--EYGRLGHGDNVPQLKPKQVRA-LSHERVVQVACGSRDAQTLALTERHWVYSWG 2870

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
            DG FG LG G    +S+P+ VETL   + +   CG   + A+          NG    K+
Sbjct: 2871 DGDFGKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQFSLAL--------SKNG----KV 2918

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            +TWG G   +LGHG       P  V+   D +  +V+ G    IA+T  G+V++ G  D+
Sbjct: 2919 WTWGKGDYFRLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTDRGEVYAWGDNDH 2978

Query: 549  GQLGSPGST-GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            GQ G+  +T  + P  + G      I ++ACGS H    SS         G + Q  H  
Sbjct: 2979 GQQGNGNTTVNRKPAIVRG---LEAITNVACGSSHSVAWSS--------TGTSPQKLHD- 3026

Query: 608  NENKQTPTLVEALRDKQVKSVVC 630
                  P L   +RD   ++++C
Sbjct: 3027 ------PILFPVVRDPLGETLLC 3043



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 138/280 (49%), Gaps = 25/280 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG ++ WG   HN  G LG V E +      +   +  L+   I  G     A+TS GK+
Sbjct: 3618 SGVIHGWG---HNHRGQLGGV-EGAKVKTATICDALTALRPVQIVGGEQTLFALTSDGKV 3673

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL- 483
            +  G G  G LG G   S S P  +ETL+ +              + +VA  + G + L 
Sbjct: 3674 YATGYGAGGRLGIGGTESVSTPTLIETLQHV-------------IVTQVAVNSGGKHCLA 3720

Query: 484  --SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
              SS  +F+WG+G +G+LGHG       P  ++   D     VACG + +  +TA+G+++
Sbjct: 3721 LTSSGDVFSWGEGDDGKLGHGSKALCERPKLIESLRDKHVVSVACGGAHSACITASGELY 3780

Query: 542  SMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKG 598
            + G   YG+LG   S  +  P ++E    H  + D+ACGS       VS    V++WG G
Sbjct: 3781 TWGKGRYGRLGHGDSEDQLKPKKVEELAGHNVL-DVACGSGDAQTLCVSRDGLVWSWGDG 3839

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
              G+LG G ++  + P  +++L++  V  V CGS F+ A+
Sbjct: 3840 DYGKLGRGGSDGCKFPQKIDSLQNAGVIKVECGSQFSVAL 3879



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 82/158 (51%), Gaps = 6/158 (3%)

Query: 487  KLFTWGDGAEGQLG----HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
            K+F  G+G  G+LG    H  A+P+  PL       I    V  G    +ALT  G+VFS
Sbjct: 2705 KVFACGEGTNGRLGLGHSHNVAQPK--PLTDLSPYFIKKVAVHSGGRHALALTIDGRVFS 2762

Query: 543  MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
             G  + G+LG          ++  ++K + I D+ACGS H A V+S  E+YTWG G  G+
Sbjct: 2763 WGEGEDGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGR 2822

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            LGHGDN  +  P  V AL  ++V  V CGS     + L
Sbjct: 2823 LGHGDNVPQLKPKQVRALSHERVVQVACGSRDAQTLAL 2860



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 4/113 (3%)

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
            +ALT++G VFS G  D G+LG  GS    + P  IE +++ +++  +ACG  H A +++ 
Sbjct: 3719 LALTSSGDVFSWGEGDDGKLGH-GSKALCERPKLIE-SLRDKHVVSVACGGAHSACITAS 3776

Query: 590  SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHK 642
             E+YTWGKG  G+LGHGD+E++  P  VE L    V  V CGS     +C+ +
Sbjct: 3777 GELYTWGKGRYGRLGHGDSEDQLKPKKVEELAGHNVLDVACGSGDAQTLCVSR 3829


>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1 [Pan
            troglodytes]
 gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4861

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 197/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3998 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4044

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4105 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+            +    ++ 
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----------SVDGSMVWA 4210

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  + V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4268

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4328

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 4329 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4357



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + D++ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 158/330 (47%), Gaps = 30/330 (9%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4052

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4053 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4157

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++  G  V++ G  DYG
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYG 4217

Query: 550  QLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +LG   ST K  P +I+  +    I+ +ACG+     ++    VYT+G+     L  G  
Sbjct: 4218 KLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             N   P  +  L    ++ V  G+  T A+
Sbjct: 4277 RNHNRPQQIPVLAGVIIEDVAVGAEHTLAL 4306



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 137/276 (49%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG G H     GQ++E    +    +      Q   + CG   T  I + G +   
Sbjct: 3998 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLAC 4051

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 4099

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+ G
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159

Query: 545  SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQ 602
            + DYG+LG    S  K P R+   ++   I  +ACG  H +AV    S V+ +G G  G+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGK 4218

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G++  K +P  ++ L    +K V CG+ F+ A+
Sbjct: 4219 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   ++ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4287 VLAGVIIED---VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGK 4343

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 4344 NVRQISAGRCHSAAWT 4359


>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
          Length = 4856

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3993 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4039

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4040 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4099

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4100 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4156

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4157 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4205

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4206 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4263

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4264 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4323

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 4324 NHVREPTLVTVLQGKNVRQISAGRCHSAA 4352



 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G           +   L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGT----------QEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3994 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4047

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4048 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4104

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4105 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4152

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4153 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4212

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4213 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4272

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  +  L    ++ V  G+  T A+
Sbjct: 4273 NHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4301



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 139/278 (50%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      +P       +  Q+    CG   T  I + G + 
Sbjct: 3993 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFSQAQQV---ICGQNCTFVIQANGTVL 4044

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4045 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4094

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+
Sbjct: 4095 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4152

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  
Sbjct: 4153 FGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4211

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4212 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4249



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4282 VLAGVVIED---VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 4338

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 4339 NVRQISAGRCHSAAWT 4354


>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
            [Callithrix jacchus]
 gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
            [Callithrix jacchus]
          Length = 4860

 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3997 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4043

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4104 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4160

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4209

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4267

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4268 IGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4327

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 4328 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4356



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE  +    I D++ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4051

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4052 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4108

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4109 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4156

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4157 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4216

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4217 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4276

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  V  L    ++ V  G+  T A+
Sbjct: 4277 NHNRPQQVPVLAGVVIEDVAVGAEHTLAL 4305



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 138/276 (50%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG G H     GQ++E    +    +      Q   + CG   T  I + G +   
Sbjct: 3997 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLAC 4050

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 4098

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+ G
Sbjct: 4099 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4158

Query: 545  SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQ 602
            + DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  G+
Sbjct: 4159 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4217

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4218 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4253



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4286 VLAGVVIED---VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGK 4342

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 4343 NVRQISAGRCHSAAWT 4358


>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
          Length = 4871

 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 4007 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4053

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4054 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4113

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4114 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4170

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4171 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4219

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4220 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4277

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4278 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4337

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 4338 NHVREPTLVTVLQGKNVRQISAGRCHSAA 4366



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  V+    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE  +    I DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 4008 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4061

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4062 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4118

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4119 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4166

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4167 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4226

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4227 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4286

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  +  L    ++ V  G+  T A+
Sbjct: 4287 NHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4315



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 139/278 (50%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      +P       +  Q+    CG   T  I + G + 
Sbjct: 4007 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFSQAQQV---ICGQNCTFVIQANGTVL 4058

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4059 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4108

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+
Sbjct: 4109 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4166

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  
Sbjct: 4167 FGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4225

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4226 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4263



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P+ V   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKPKVVEA-LQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P +VEAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4296 VLAGVVIED---VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 4352

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 4353 NVRQISAGRCHSAAWT 4368


>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
 gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
 gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
          Length = 440

 Score =  183 bits (464), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 184/348 (52%), Gaps = 18/348 (5%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQG-QIFSWGEGSGGKLGHGVE 333
           ++   D  D   P  L +       S+ CG+ H V  ++ G +++SWG G  G+LGHG  
Sbjct: 46  QLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS 105

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +D+  P  I AL+G  I  +ACG+ H  AVT+ G++ +WG   +  G LG        +P
Sbjct: 106 SDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGR--NQNGQLGLGDTEDSLVP 163

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           +K+    EG++I  +  G  HTAA+T  G L+ +G G +G LG GDR+   VP  V +  
Sbjct: 164 QKIQ-AFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTG 222

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
             K  M +CG  HT ++              S  L+T+G    GQLGHGD E  ++P  +
Sbjct: 223 GEKMSMVACGWRHTISVS------------YSGALYTYGWSKYGQLGHGDLEDHLIPHKL 270

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRY 572
           +   +    +++ G   T+ALT+ G+++  G   +GQ+G   +  +  P ++      + 
Sbjct: 271 EALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 330

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           ++ ++CG  H   V+ ++ V+ WG+G NGQLG G++ ++  P ++EAL
Sbjct: 331 VQ-VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 377



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 172/340 (50%), Gaps = 18/340 (5%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+ G+ H+V +     + SWG G  G+LGHG   D   P  + AL+G  I  V CG  HT
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79

Query: 361 CAVTLSG-DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
            A + SG ++Y+WG G  + G LG  +    + P  +   + G++I  I CG  H  A+T
Sbjct: 80  VAYSQSGMEVYSWGWG--DFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCLAVT 136

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G++ ++G    G LG GD   + VP++++  + ++  M + G  HTAA+ E       
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 189

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                   L+ WG G  G LG GD   R+VP  V  +       VACG   TI+++ +G 
Sbjct: 190 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 244

Query: 540 VFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           +++ G + YGQLG         P ++E  + + +I  I+ G  H   ++S  ++Y WG  
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDGKLYGWGWN 303

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             GQ+G G+N ++ +P  V    D++V  V CG   T A+
Sbjct: 304 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 343



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 96/187 (51%), Gaps = 19/187 (10%)

Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
           K ++ S G  H+ A+            LS   + +WG G +GQLGHGDAE R  P  +  
Sbjct: 16  KVLIISAGASHSVAL------------LSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA 63

Query: 516 SDDISFCKVACGHSITIALTATG-QVFSMGSADYGQLGSPGSTGKF---PTRIEGNIKHR 571
            D      V CG   T+A + +G +V+S G  D+G+LG   S+  F   P +    I+  
Sbjct: 64  LDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR-- 121

Query: 572 YIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
            I+ IACG  H   V+ + EV +WG+  NGQLG GD E+   P  ++A    ++K V  G
Sbjct: 122 -IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAG 180

Query: 632 SNFTAAI 638
           +  TAA+
Sbjct: 181 AEHTAAV 187



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 3/119 (2%)

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYH 582
           ++ G S ++AL +   V S G  + GQLG   +  +  PT++     H+ +  + CG+ H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVS-VTCGADH 78

Query: 583 -IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +A   S  EVY+WG G  G+LGHG++ +  TP  ++AL   ++K + CG +   A+ +
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 34/46 (73%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           ++CG +H + VT++  +F+WG G+ G+LG G   D ++PK+I+AL+
Sbjct: 333 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 378


>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
 gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
          Length = 5087

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 126/391 (32%), Positives = 193/391 (49%), Gaps = 37/391 (9%)

Query: 255  VFIWG----EGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            V +WG    E LG GL G  V              +P   ++   L    IA GSK   +
Sbjct: 3076 VMVWGLNDKEQLG-GLKGSKVK-------------VPTFSQTISRLRPIHIAGGSKSLFI 3121

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            V+++G++F+ GEG+ G+LG GV  +V  P  +  L+   +  VA   G  H  A+TL G 
Sbjct: 3122 VSQEGRVFACGEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGK 3181

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +++WG+G    G LG  +  +   PR+V   +   +I  + CG  H+AAI+S G+L+T+G
Sbjct: 3182 VFSWGEG--EDGKLGHGNRTTLDKPRQVEA-LRAKKIRDVACGSSHSAAISSQGELYTWG 3238

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV--WHTAAIVEVAGKTSGSNGLSSK 486
             G +G LGHGD ++   P+ V  L   + V  +CG     T A+ E              
Sbjct: 3239 LGEYGRLGHGDNATQLKPKLVAALAGRRVVQVACGSRDAQTLALTE------------DG 3286

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +F+WGDG  G+LG G +E    P  ++    I   ++ CG   ++ALT  G+V++ G  
Sbjct: 3287 AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKG 3346

Query: 547  DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            DY +LG  G       +  G ++ R +  +A G+ H   V+   +VY WG   +GQ G G
Sbjct: 3347 DYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSG 3406

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            +    + P LV  L D  V  V CGS+ + A
Sbjct: 3407 NTFVNKKPALVIGLDDVFVNRVACGSSHSIA 3437



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 128/394 (32%), Positives = 195/394 (49%), Gaps = 29/394 (7%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            + G   ++ WG     G LGG + G  I +        P   E+  +L    +A G +  
Sbjct: 4220 WGGASTIYGWGHN-HRGQLGG-LEGSRIKT--------PTPCEALSLLRPVQLAGGEQSL 4269

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT  G++F+ G GSGG+LG G     + P L+ +L    +  VA   G  H  A+T  
Sbjct: 4270 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 4329

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G++Y WG+G    G LG  + +S+  P+ V   + G+ ++ I CG  H+AAIT++G++ T
Sbjct: 4330 GEVYAWGEG--EDGKLGHGNRVSYDRPKLVE-HLHGMSVADIACGSAHSAAITASGQVLT 4386

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+ VE L   + +  +CG          +G           
Sbjct: 4387 WGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG----------SGDAQTLCITDDD 4436

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   +P  ++    +   KV CG   ++ALT +G V++ G  
Sbjct: 4437 NVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4496

Query: 547  DYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
            D+ +LG  GS    + P ++   ++ + I  IA GS H    S   EVYTWG    GQLG
Sbjct: 4497 DFHRLGH-GSVDHVRRPKKVAA-LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG 4554

Query: 605  HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G     Q P LV AL+ K +  V CGS  T A+
Sbjct: 4555 DGTVTAIQRPRLVSALQGKHIVKVTCGSAHTLAL 4588



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 149/307 (48%), Gaps = 19/307 (6%)

Query: 286  LPKVLEST--VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLID 343
            +P +L S   V +   ++  G KH + +T +G++++WGEG  GKLGHG       PKL++
Sbjct: 4299 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRVSYDRPKLVE 4358

Query: 344  ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
             L+G ++  +ACG  H+ A+T SG + TWG G +  G LG         P+ V   + G 
Sbjct: 4359 HLHGMSVADIACGSAHSAAITASGQVLTWGKGRY--GRLGHGDSEDQLRPKLVEALL-GY 4415

Query: 404  QISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
            +   I CG     T  IT    ++++GDG +G LG G      +P ++E+L  L  +   
Sbjct: 4416 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 4475

Query: 462  CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
            CG   + A+ +            S  ++TWG G   +LGHG  +    P  V        
Sbjct: 4476 CGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4523

Query: 522  CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
              +A G    +A + +G+V++ G  D GQLG    T     R+   ++ ++I  + CGS 
Sbjct: 4524 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVSALQGKHIVKVTCGSA 4583

Query: 582  HIAVVSS 588
            H   +S+
Sbjct: 4584 HTLALST 4590



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 145/287 (50%), Gaps = 27/287 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G+V+ WGEG  +G LG   +G  +S  DR     PK++E    +    IACGS H+  +T
Sbjct: 4330 GEVYAWGEG-EDGKLG---HGNRVSY-DR-----PKLVEHLHGMSVADIACGSAHSAAIT 4379

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
              GQ+ +WG+G  G+LGHG   D   PKL++AL G     +ACG  +  T  +T   +++
Sbjct: 4380 ASGQVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4439

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+       +P K+   + GL +  + CG   + A+T +G ++T+G G
Sbjct: 4440 SWGDG--DYGKLGRGGSDGCKLPYKIE-SLAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4496

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             F  LGHG       P++V  L+  K +  + G  H  A  +            S +++T
Sbjct: 4497 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSD------------SGEVYT 4544

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
            WGD  EGQLG G       P  V         KV CG + T+AL+ +
Sbjct: 4545 WGDNDEGQLGDGTVTAIQRPRLVSALQGKHIVKVTCGSAHTLALSTS 4591



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 142/307 (46%), Gaps = 31/307 (10%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA- 354
              + + C     +L++++G++ +W           +    + P+ ++         +A 
Sbjct: 587 FQVKQVVCSENQVLLLSQEGKLHAWR----------LSKPEAEPQPLEEAGHETFISIAG 636

Query: 355 -CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
            C   H  A+  + + Y+WG G  +   LG     +  +P K++  +E   + S+ CG  
Sbjct: 637 HCEGRHFMAIDSNHNAYSWGAGEDHR--LGHGDTHARAVPTKIAA-LEQHCVQSVFCGCT 693

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           ++A IT  G L T+G GT+  LGHG+     +P  V  L E           HT   V +
Sbjct: 694 YSAVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAE-----------HTVVDVAL 742

Query: 474 AGKTSGSNGLSSKKL-FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
               + S  L+S+ L F WGDG  G+LG+G+    + P+ V+    +   ++  G   ++
Sbjct: 743 GSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ--RIFAGSQYSV 800

Query: 533 ALTATGQVFSMGSADY--GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           AL++ GQV++ G A     QL      G    R+  +++H+ I D+A G  H   +SS  
Sbjct: 801 ALSSEGQVYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSSG 860

Query: 591 EVYTWGK 597
           EV+ WG+
Sbjct: 861 EVFGWGR 867



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 82/156 (52%), Gaps = 2/156 (1%)

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATGQVFSMG 544
            ++F  G+G  G+LG G      +P  + V       KVA   G    +ALT  G+VFS G
Sbjct: 3127 RVFACGEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWG 3186

Query: 545  SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
              + G+LG    T     R    ++ + I D+ACGS H A +SS+ E+YTWG G  G+LG
Sbjct: 3187 EGEDGKLGHGNRTTLDKPRQVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLG 3246

Query: 605  HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            HGDN  +  P LV AL  ++V  V CGS     + L
Sbjct: 3247 HGDNATQLKPKLVAALAGRRVVQVACGSRDAQTLAL 3282



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 117/254 (46%), Gaps = 23/254 (9%)

Query: 303 CGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCA 362
           C  +H + +      +SWG G   +LGHG     + P  I AL    +  V CG  ++  
Sbjct: 638 CEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCTYSAV 697

Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS-SICCGPWHTAAITSA 421
           +T  G+L TWG G +    LG  +     +P  V+   E   +  ++  G  H+ A+TS 
Sbjct: 698 ITCGGNLLTWGRGTY--ARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSE 755

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G +F +GDG +G LG+G+ + +  P  VE+L  ++ + A  G  ++ A+           
Sbjct: 756 GLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRIFA--GSQYSVALS---------- 803

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRV----VPLCVKVSDDISFCKVACGHSITIALTAT 537
             S  +++TWG      LGH   E  V    VP  V          +A G +  +AL+++
Sbjct: 804 --SEGQVYTWGKAT--CLGHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSSS 859

Query: 538 GQVFSMGSADYGQL 551
           G+VF  G  D  Q+
Sbjct: 860 GEVFGWGRNDCQQV 873



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 104/222 (46%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            A  ++ +G    G LG  + S    P   E L  L+ V  + G     A+          
Sbjct: 4223 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT--------- 4273

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
                  KLF  G G+ G+LG G ++   +P  +     +   KVA   G    +ALT  G
Sbjct: 4274 ---PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4330

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V++ G  + G+LG          ++  ++    + DIACGS H A +++  +V TWGKG
Sbjct: 4331 EVYAWGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVADIACGSAHSAAITASGQVLTWGKG 4390

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++  P LVEAL   +   + CGS     +C+
Sbjct: 4391 RYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCI 4432



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 26/233 (11%)

Query: 470 IVEVAGKTSGSNGL---SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
            + +AG   G + +   S+   ++WG G + +LGHGD   R VP  +   +      V C
Sbjct: 631 FISIAGHCEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFC 690

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS--YHI 583
           G + +  +T  G + + G   Y +LG   S  +  PT +    +H  + D+A GS   H 
Sbjct: 691 GCTYSAVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVV-DVALGSGDAHS 749

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI----- 638
             ++S+  V+ WG G  G+LG+G+      P LVE+L   +V+ +  GS ++ A+     
Sbjct: 750 LALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL--PRVQRIFAGSQYSVALSSEGQ 807

Query: 639 --------CLHKGVSIADHSI--CSGCRNQFNFRRRRHNCYNCGLVYCKLCSS 681
                   CL  G  + + S+  CS  R   + + +R      G+ +C   SS
Sbjct: 808 VYTWGKATCL--GHQLVERSVQGCSVPRLVSSLQHKRIVDMAVGVAHCLALSS 858



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 72/140 (51%), Gaps = 4/140 (2%)

Query: 504 AEPRVVPLCVKVSDDISFCKVA--CGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-F 560
           ++P   P  ++ +   +F  +A  C     +A+ +    +S G+ +  +LG   +  +  
Sbjct: 614 SKPEAEPQPLEEAGHETFISIAGHCEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAV 673

Query: 561 PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           PT+I    +H  ++ + CG  + AV++    + TWG+G   +LGHG+++++  PTLV AL
Sbjct: 674 PTKIAALEQH-CVQSVFCGCTYSAVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAAL 732

Query: 621 RDKQVKSVVCGSNFTAAICL 640
            +  V  V  GS    ++ L
Sbjct: 733 AEHTVVDVALGSGDAHSLAL 752



 Score = 42.7 bits (99), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 2/102 (1%)

Query: 540  VFSMGSADYGQLGS-PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            V   G  D  QLG   GS  K PT  +   + R I  IA GS  + +VS +  V+  G+G
Sbjct: 3076 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIH-IAGGSKSLFIVSQEGRVFACGEG 3134

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
             NG+LG G   N   P  +  L    VK V   S    A+ L
Sbjct: 3135 TNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL 3176


>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
          Length = 1060

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 176/365 (48%), Gaps = 24/365 (6%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           V  WG  L +G LG  + G+E          LP+ + S   ++   IACG +H + V K 
Sbjct: 11  VLCWGS-LTHGQLG--LGGLE-----EETVTLPREIRSFCNVEVVHIACGLQHTLFVKKD 62

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           G++ S G    G+LGH  E     P LID+L   N+   + G  H+  +T +G ++TWG 
Sbjct: 63  GRVLSCGNNDYGQLGH--EKPCKRPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGS 120

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
              N    GQV   S  IPR V G +   ++  + CG  HT  +T+ G+++T+G    G 
Sbjct: 121 NEDNQLGRGQVDSASTSIPRMVRG-LADHKVVQVACGSAHTVGLTATGQIYTWGSNNHGQ 179

Query: 435 LGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG 494
           LG  +++  + P+ V  +  L  V  + G  H   +              S  LF WG  
Sbjct: 180 LGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLT------------ISGALFAWGCN 227

Query: 495 AEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSP 554
           + GQLG GD + R  P  VK   +   C +ACG   ++ALT  G VF+ G+  YGQLG  
Sbjct: 228 SFGQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHN 287

Query: 555 GSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQT 613
            S  +   R    +    +  IACG  H IA V S   VY +G G NGQLG G   N+ +
Sbjct: 288 TSNNELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLGTGSTVNRMS 347

Query: 614 PTLVE 618
           P +V+
Sbjct: 348 PAMVK 352



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/325 (29%), Positives = 148/325 (45%), Gaps = 21/325 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  + G+LG G   E  V+ P+ I +     +  +ACG  HT  V   G + + G+
Sbjct: 11  VLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRVLSCGN 70

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++ G LG              G+   LQ SS   G  H+  +T AG++FT+G      
Sbjct: 71  --NDYGQLGHEKPCKRPALIDSLGERNVLQASS---GTKHSTVLTDAGQVFTWGSNEDNQ 125

Query: 435 LGHG--DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           LG G  D +STS+PR V  L + K V  +CG  HT  +             ++ +++TWG
Sbjct: 126 LGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLT------------ATGQIYTWG 173

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
               GQLG  +  P+  P  V     +   +VA G    + LT +G +F+ G   +GQLG
Sbjct: 174 SNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQLG 233

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 +    +   ++++ I  +ACG  H   ++    V+T+G G  GQLGH  + N+ 
Sbjct: 234 VGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQLGHNTSNNEL 293

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAA 637
            P  V  L    V  + CG   + A
Sbjct: 294 LPRKVFELMGSSVTQIACGRKHSIA 318



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 140/282 (49%), Gaps = 17/282 (6%)

Query: 365 LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
           L   +  WG   H    LG + E +  +PR++      +++  I CG  HT  +   G++
Sbjct: 7   LKSSVLCWGSLTHGQLGLGGLEEETVTLPREIR-SFCNVEVVHIACGLQHTLFVKKDGRV 65

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
            + G+  +G LGH        P  +++L E   + AS G  H+  + +            
Sbjct: 66  LSCGNNDYGQLGH--EKPCKRPALIDSLGERNVLQASSGTKHSTVLTDAG---------- 113

Query: 485 SKKLFTWGDGAEGQLGHG--DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             ++FTWG   + QLG G  D+    +P  V+   D    +VACG + T+ LTATGQ+++
Sbjct: 114 --QVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYT 171

Query: 543 MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
            GS ++GQLG    T +   +    I    I  +A G+ H  V++    ++ WG  + GQ
Sbjct: 172 WGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQ 231

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           LG GD++++  PTLV+ LR++ + ++ CG + + A+    GV
Sbjct: 232 LGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTRDGGV 273



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 123/262 (46%), Gaps = 22/262 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG    N L  G V+    S        +P+++          +ACGS H V +T
Sbjct: 113 GQVFTWGSNEDNQLGRGQVDSASTS--------IPRMVRGLADHKVVQVACGSAHTVGLT 164

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             GQI++WG  + G+LG   +   + P+ +  ++G  I  VA G  H   +T+SG L+ W
Sbjct: 165 ATGQIYTWGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLTISGALFAW 224

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
             G ++ G LG   +     P  V   +    I ++ CG  H+ A+T  G +FTFG G +
Sbjct: 225 --GCNSFGQLGVGDDQDRGAPTLVK-TLRNQGICALACGDDHSLALTRDGGVFTFGAGMY 281

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           G LGH   ++  +PR+V  L        +CG  H+ A V            SS +++ +G
Sbjct: 282 GQLGHNTSNNELLPRKVFELMGSSVTQIACGRKHSIAYVP-----------SSGRVYVFG 330

Query: 493 DGAEGQLGHGDAEPRVVPLCVK 514
            G  GQLG G    R+ P  VK
Sbjct: 331 LGGNGQLGTGSTVNRMSPAMVK 352


>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
          Length = 4862

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 124/389 (31%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3998 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4044

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4105 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4210

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  + V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4268

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4328

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K ++ +  G   +AA
Sbjct: 4329 NHVREPTLVTGLQGKNIRQISAGRCHSAA 4357



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + D++ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 159/330 (48%), Gaps = 30/330 (9%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4052

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4053 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4157

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4217

Query: 550  QLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +LG   ST K  P +I+  +    I+ +ACG+     ++    VYT+G+     L  G  
Sbjct: 4218 KLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             N   P  +  L    ++ V  G+  T A+
Sbjct: 4277 RNHNRPQQIPVLAGMIIEDVAVGAEHTLAL 4306



 Score =  115 bits (289), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 138/276 (50%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG G H     GQ++E    +    +      Q   + CG   T  I + G +   
Sbjct: 3998 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLAC 4051

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 4099

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+ G
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159

Query: 545  SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQ 602
            + DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  G+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4218

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G++  K +P  ++ L    +K V CG+ F+ A+
Sbjct: 4219 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   ++ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4287 VLAGMIIED---VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGK 4343

Query: 349  NIHMVACGEFHTCAVT 364
            NI  ++ G  H+ A T
Sbjct: 4344 NIRQISAGRCHSAAWT 4359


>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
 gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 184/348 (52%), Gaps = 18/348 (5%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQG-QIFSWGEGSGGKLGHGVE 333
           ++   D  D   P  L +       S+ CG+ H V  ++ G +++SWG G  G+LGHG  
Sbjct: 46  QLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS 105

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +D+  P  I AL+G  I  +ACG+ H  AVT+ G++ +WG   +  G LG        +P
Sbjct: 106 SDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGR--NQNGQLGLGDTEDSLVP 163

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           +K+    EG++I  +  G  HTAA+T  G L+ +G G +G LG GDR+   VP  V +  
Sbjct: 164 QKIQ-AFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAG 222

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
             K  M +CG  HT ++              S  L+T+G    GQLGHGD E  ++P  +
Sbjct: 223 GEKMSMVACGWRHTISVS------------YSGALYTYGWSKYGQLGHGDLEDHLIPHKL 270

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRY 572
           +   +    +++ G   T+ALT+ G+++  G   +GQ+G   +  +  P ++      + 
Sbjct: 271 EALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 330

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           ++ ++CG  H   V+ ++ V+ WG+G NGQLG G++ ++  P ++EAL
Sbjct: 331 VQ-VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 377



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 172/340 (50%), Gaps = 18/340 (5%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+ G+ H+V +     + SWG G  G+LGHG   D   P  + AL+G  I  V CG  HT
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79

Query: 361 CAVTLSG-DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
            A + SG ++Y+WG G  + G LG  +    + P  +   + G++I  I CG  H  A+T
Sbjct: 80  VAYSQSGMEVYSWGWG--DFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCLAVT 136

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G++ ++G    G LG GD   + VP++++  + ++  M + G  HTAA+ E       
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 189

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                   L+ WG G  G LG GD   R+VP  V  +       VACG   TI+++ +G 
Sbjct: 190 -----DGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKMSMVACGWRHTISVSYSGA 244

Query: 540 VFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           +++ G + YGQLG         P ++E  + + +I  I+ G  H   ++S  ++Y WG  
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDGKLYGWGWN 303

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             GQ+G G+N ++ +P  V    D++V  V CG   T A+
Sbjct: 304 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 343



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 3/119 (2%)

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYH 582
           ++ G S ++AL +   V S G  + GQLG   +  +  PT++     H+ +  + CG+ H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVS-VTCGADH 78

Query: 583 -IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +A   S  EVY+WG G  G+LGHG++ +  TP  ++AL   ++K + CG +   A+ +
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 34/46 (73%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           ++CG +H + VT++  +F+WG G+ G+LG G   D ++PK+I+AL+
Sbjct: 333 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 378


>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
            harrisii]
          Length = 4865

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 124/389 (31%), Positives = 197/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A   V I +A            +     AQ + CG     ++  
Sbjct: 4002 DVYLWGAG-RHGQLAEAGRNVMIPAA------------APSFSQAQQVICGQNCTFVIQA 4048

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4049 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4108

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4109 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVIQMSCGFKHSAVVTSDGKLFTFGNG 4165

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4166 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4214

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4215 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4272

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4273 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4332

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTL+  L+ K ++ +  G   +AA
Sbjct: 4333 NHVREPTLITVLQGKNIRQISAGRCHSAA 4361



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G           +   L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGT----------QEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA++  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGVAIQQISAGTSHSLA 732



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 4003 VYLWGAGRHGQLAEAGRNVMIPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4056

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4057 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4113

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + +  SCG  H+A +             S  KLFT
Sbjct: 4114 DYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVT------------SDGKLFT 4161

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4162 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4221

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4222 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4281

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  +  L    ++ V  G+  T A+
Sbjct: 4282 NHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4310



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 139/278 (50%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      IP       +  Q+    CG   T  I + G + 
Sbjct: 4002 DVYLWGAGRH-----GQLAEAGRNVMIPAAAPSFSQAQQV---ICGQNCTFVIQANGTVL 4053

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4054 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4103

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+
Sbjct: 4104 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFT 4161

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  
Sbjct: 4162 FGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4220

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4221 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4258



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  V++ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVSEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D ++  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGVAIQQISAGTSHSLAWTA 735



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A++  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P LI  L G 
Sbjct: 4291 VLAGVVIED---VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGK 4347

Query: 349  NIHMVACGEFHTCAVTLS 366
            NI  ++ G  H+ A T S
Sbjct: 4348 NIRQISAGRCHSAAWTAS 4365


>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
            anubis]
          Length = 3314

 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 2451 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 2497

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 2498 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 2557

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 2558 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 2614

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 2615 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 2663

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  + V   I   KVACG   ++ALT  G V++ G      
Sbjct: 2664 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 2721

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 2722 IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 2781

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 2782 NHVREPTLVTGLQGKNVRQISAGRCHSAA 2810



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 159/330 (48%), Gaps = 30/330 (9%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 2452 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 2505

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 2506 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 2562

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 2563 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 2610

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 2611 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 2670

Query: 550  QLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +LG   ST K  P +I+  +    I+ +ACG+     ++    VYT+G+     L  G  
Sbjct: 2671 KLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 2729

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             N   P  +  L    ++ V  G+  T A+
Sbjct: 2730 RNHNRPQQIPVLAGMIIEDVAVGAEHTLAL 2759



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 138/276 (50%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG G H     GQ++E    +    +      Q   + CG   T  I + G +   
Sbjct: 2451 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLAC 2504

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 2505 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 2552

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+ G
Sbjct: 2553 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 2612

Query: 545  SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQ 602
            + DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  G+
Sbjct: 2613 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 2671

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G++  K +P  ++ L    +K V CG+ F+ A+
Sbjct: 2672 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 2707



 Score = 50.8 bits (120), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   ++ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 2740 VLAGMIIED---VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGK 2796

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 2797 NVRQISAGRCHSAAWT 2812


>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
          Length = 3507

 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 2644 DVYLWGAG-RHGQLAEA----------GRNVMVPATAPS--FSQAQQVICGQNCTFVIQA 2690

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 2691 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 2750

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 2751 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 2807

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 2808 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 2856

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 2857 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 2914

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 2915 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 2974

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K ++ +  G   +AA
Sbjct: 2975 NHVREPTLVTVLQGKNIRQISAGRCHSAA 3003



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 2645 VYLWGAGRHGQLAEAGRNVMVPATAPSF------SQAQQVICGQNCTFVIQANGTVLACG 2698

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 2699 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 2755

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 2756 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 2803

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 2804 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 2863

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 2864 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 2923

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  +  L    ++ V  G+  T A+
Sbjct: 2924 NHNRPQQIPVLAGVVIEDVAVGAEHTLAL 2952



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 138/276 (50%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG G H     GQ++E    +    +      Q   + CG   T  I + G +   
Sbjct: 2644 DVYLWGAGRH-----GQLAEAGRNVMVPATAPSFS-QAQQVICGQNCTFVIQANGTVLAC 2697

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 2698 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 2745

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+ G
Sbjct: 2746 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 2805

Query: 545  SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQ 602
            + DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  G+
Sbjct: 2806 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 2864

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 2865 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 2900



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 2933 VLAGVVIED---VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 2989

Query: 349  NIHMVACGEFHTCAVT 364
            NI  ++ G  H+ A T
Sbjct: 2990 NIRQISAGRCHSAAWT 3005


>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Pongo abelii]
          Length = 4864

 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 4001 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4047

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4048 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4107

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4108 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4164

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4165 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4213

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  + V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4214 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4271

Query: 551  LGSPGSTGKFPTRIEGN--IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4272 IGLPEGRARNHNRPQQIPLLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4331

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 4332 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4360



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + D++ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 159/330 (48%), Gaps = 30/330 (9%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 4002 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4055

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4056 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4112

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4113 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4160

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4161 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4220

Query: 550  QLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +LG   ST K  P +I+  +    I+ +ACG+     ++    VYT+G+     L  G  
Sbjct: 4221 KLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4279

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             N   P  +  L    ++ V  G+  T A+
Sbjct: 4280 RNHNRPQQIPLLAGVIIEDVAVGAEHTLAL 4309



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 139/278 (50%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      +P       +  Q+    CG   T  I + G + 
Sbjct: 4001 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFSQAQQV---ICGQNCTFVIQANGTVL 4052

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4053 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4102

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+
Sbjct: 4103 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4160

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  
Sbjct: 4161 FGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4219

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  ++ L    +K V CG+ F+ A+
Sbjct: 4220 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4257



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 36/66 (54%)

Query: 299  QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
            + +A G++H + +   G +++WG  S G+LG G    V  P L+  L G N+  ++ G  
Sbjct: 4297 EDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRC 4356

Query: 359  HTCAVT 364
            H+ A T
Sbjct: 4357 HSAAWT 4362


>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus cuniculus]
          Length = 4860

 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3997 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4043

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4104 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4160

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4209

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4267

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4268 IGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4327

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K ++ +  G   +AA
Sbjct: 4328 NHVREPTLVTVLQGKNIRQISAGRCHSAA 4356



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4051

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4052 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4108

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4109 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4156

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4157 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4216

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4217 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4276

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  V  L    ++ V  G+  T A+
Sbjct: 4277 NHNRPQQVPVLAGVVIEDVAVGAEHTLAL 4305



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 139/278 (50%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      +P       +  Q+    CG   T  I + G + 
Sbjct: 3997 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFSQAQQV---ICGQNCTFVIQANGTVL 4048

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4049 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4098

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+
Sbjct: 4099 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4156

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  
Sbjct: 4157 FGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4215

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4216 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4253



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4286 VLAGVVIED---VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 4342

Query: 349  NIHMVACGEFHTCAVT 364
            NI  ++ G  H+ A T
Sbjct: 4343 NIRQISAGRCHSAAWT 4358


>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
          Length = 3628

 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 129/389 (33%), Positives = 202/389 (51%), Gaps = 27/389 (6%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            V++WG    + L  G + G +I         LP   E    L    IA GSK   +V+++
Sbjct: 2591 VYVWGLNDKDQL--GGLKGSKIK--------LPIYSEVLSKLKPIHIAGGSKTLFIVSQE 2640

Query: 315  GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTW 372
            G++++ GEG+ G+LG G + +V  PK I  L+   I  VA   G  H  A+T  G +++W
Sbjct: 2641 GKLYACGEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKVFSW 2700

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            G+G    G LG  + IS   P+ +   ++  +I  I CG  H+AAI S G+L+T+G G +
Sbjct: 2701 GEG--EDGKLGHGNCISLDKPKLIE-ILKSKRIRDIACGSGHSAAIASNGELYTWGLGEY 2757

Query: 433  GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            G LGHGD  + + P+ V+ L   + V  +CG   +     +A  T G        +++WG
Sbjct: 2758 GRLGHGDTITQTRPKLVQALVGQRVVQVACG---SRDAQTMALTTDGC-------VYSWG 2807

Query: 493  DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            DG  G+LG G ++    PL V   + +   +V CG   ++ALT  G+V++ G  DY +LG
Sbjct: 2808 DGDFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLG 2867

Query: 553  SPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
                   + PT +EG ++ + I  +A G+ H   V+   +VY WG   +GQ G+G     
Sbjct: 2868 HGNDHHVRKPTLVEG-LRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGATSVN 2926

Query: 612  QTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            + P+LV  L D +V  V CGS+ + A  L
Sbjct: 2927 RKPSLVHDLEDARVNRVSCGSSHSIAWVL 2955



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 162/334 (48%), Gaps = 29/334 (8%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE--STVVLDAQSIACGSKHAVL 310
            G ++  GEG  NG LG           D  +   PK +   S  V+   ++  G KHA+ 
Sbjct: 2641 GKLYACGEGT-NGRLG---------LGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALA 2690

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
            +T+ G++FSWGEG  GKLGHG    +  PKLI+ L    I  +ACG  H+ A+  +G+LY
Sbjct: 2691 LTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAIASNGELY 2750

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFG 428
            TWG G    G LG    I+   P+ V   + G ++  + CG     T A+T+ G ++++G
Sbjct: 2751 TWGLG--EYGRLGHGDTITQTRPKLVQA-LVGQRVVQVACGSRDAQTMALTTDGCVYSWG 2807

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
            DG FG LG G       P  V+ L  L  +   CG   + A+ +              ++
Sbjct: 2808 DGDFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYG------------EV 2855

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            +TWG G   +LGHG+      P  V+         VA G    +A+T TGQV++ G  D+
Sbjct: 2856 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDH 2915

Query: 549  GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
            GQ G+  ++      +  +++   +  ++CGS H
Sbjct: 2916 GQQGNGATSVNRKPSLVHDLEDARVNRVSCGSSH 2949



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 164/327 (50%), Gaps = 37/327 (11%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++ +WG   G K G+G     S P   D + G  I  + C E     ++L+G+ Y    G
Sbjct: 79  EVLAWG---GVKFGNG-----STPFYCDPIAGLGIKQLCCTERSLMILSLNGNAYNMYHG 130

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEG--LQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
                     SE  +  P +V G  +     I+S   G  H  A+T  G ++++G+G  G
Sbjct: 131 ----------SETQY--PLRVHGFSDKPITMIASHADGK-HYLALTQDGCVYSWGNGDGG 177

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
            LGHGD  S   P+ +E+L +   V  +CG  ++AA+             +S +L+TWG 
Sbjct: 178 RLGHGDTVSYDEPKLIESLLDKNIVFIACGSTYSAALS------------ASGELYTWGR 225

Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQL 551
           G  G+LGHG+ +  + P  V      +   VACG   S T+ +TA+G VFS G  DYG+L
Sbjct: 226 GNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKL 285

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
           G  G+ G    +I   +    +  + CG    A +++  EVYTWGKG   +LGHG  E+ 
Sbjct: 286 GRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHV 345

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + P ++E+LRDK++K +  G+    A+
Sbjct: 346 RYPKVIESLRDKKIKDLSVGTTHILAL 372



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 165/348 (47%), Gaps = 27/348 (7%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA- 354
           L  + + C  +  ++++  G  ++   GS          +  YP  +   +   I M+A 
Sbjct: 103 LGIKQLCCTERSLMILSLNGNAYNMYHGS----------ETQYPLRVHGFSDKPITMIAS 152

Query: 355 -CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
                H  A+T  G +Y+WG+G  + G LG    +S+  P+ +   ++   I  I CG  
Sbjct: 153 HADGKHYLALTQDGCVYSWGNG--DGGRLGHGDTVSYDEPKLIESLLDK-NIVFIACGST 209

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           ++AA++++G+L+T+G G +G LGHG+      P  V TLK    V  +CG          
Sbjct: 210 YSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACG---------- 259

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
           +G +      +S  +F+WGDG  G+LG G  +    P  V    DI+  KV CG   + A
Sbjct: 260 SGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAA 319

Query: 534 LTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
           LTA G+V++ G  D  +LG       ++P  IE +++ + I+D++ G+ HI  ++    V
Sbjct: 320 LTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIE-SLRDKKIKDLSVGTTHILALTEDQFV 378

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           Y WG+   GQ+          PTL   L  K V  +  G   + A C+
Sbjct: 379 YGWGRNDYGQIDPTLGPVVSEPTLCPTLSSKTVIGLASGPTQSFAWCM 426



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 140/289 (48%), Gaps = 27/289 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WGEG  +G LG         S D+     PK++E       + IACGS H+  + 
Sbjct: 2695 GKVFSWGEG-EDGKLGHG----NCISLDK-----PKLIEILKSKRIRDIACGSGHSAAIA 2744

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
              G++++WG G  G+LGHG     + PKL+ AL G  +  VACG  +  T A+T  G +Y
Sbjct: 2745 SNGELYTWGLGEYGRLGHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVY 2804

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+      + P  V  ++ GL +  + CG   + A+T  G+++T+G G
Sbjct: 2805 SWGDG--DFGKLGRGGSDGCYTPLAVD-RLNGLGVIQVECGAQFSLALTKYGEVWTWGKG 2861

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +  LGHG+      P  VE L+  K +  + G  H  A+ +              +++ 
Sbjct: 2862 DYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTG------------QVYA 2909

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
            WGD   GQ G+G       P  V   +D    +V+CG S +IA     Q
Sbjct: 2910 WGDNDHGQQGNGATSVNRKPSLVHDLEDARVNRVSCGSSHSIAWVLVDQ 2958



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 141/282 (50%), Gaps = 31/282 (10%)

Query: 235 SAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTV 294
           + ++S + G  +      G V+ WG G G G LG   +G  +S  +      PK++ES +
Sbjct: 148 TMIASHADGKHYLALTQDGCVYSWGNGDG-GRLG---HGDTVSYDE------PKLIESLL 197

Query: 295 VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA 354
             +   IACGS ++  ++  G++++WG G+ G+LGHG   DV  P L+  L G  +  VA
Sbjct: 198 DKNIVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVA 257

Query: 355 C--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
           C  G+  T  VT SG +++WGDG  + G LG+        P K+  ++  + +  + CG 
Sbjct: 258 CGSGDSQTLCVTASGIVFSWGDG--DYGKLGRGGTDGSKTP-KIVDKLLDINVVKVFCGG 314

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
             +AA+T+ G+++T+G G    LGHG       P+ +E+L++ K    S G  H  A+ E
Sbjct: 315 QFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTTHILALTE 374

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQ----LGHGDAEPRVVP 510
                        + ++ WG    GQ    LG   +EP + P
Sbjct: 375 ------------DQFVYGWGRNDYGQIDPTLGPVVSEPTLCP 404



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 112/250 (44%), Gaps = 28/250 (11%)

Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
           + GL I  +CC        T    +    +G    + HG  S T  P  V    +    M
Sbjct: 100 IAGLGIKQLCC--------TERSLMILSLNGNAYNMYHG--SETQYPLRVHGFSDKPITM 149

Query: 460 ASCGVWHTAAIVEVAGKTSGSNGLSSKK---LFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
                        +A    G + L+  +   +++WG+G  G+LGHGD      P  ++  
Sbjct: 150 -------------IASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIESL 196

Query: 517 DDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDI 576
            D +   +ACG + + AL+A+G++++ G  +YG+LG           +   +K   +  +
Sbjct: 197 LDKNIVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHV 256

Query: 577 ACGS--YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNF 634
           ACGS       V++   V++WG G  G+LG G  +  +TP +V+ L D  V  V CG  F
Sbjct: 257 ACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQF 316

Query: 635 TAAICLHKGV 644
           +AA+  H  V
Sbjct: 317 SAALTAHGEV 326



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 23/195 (11%)

Query: 189 LSFTAAAKAYTRAESVSKSL------NF--VASGGLDDANSRS--STADSFRISLSSAVS 238
           + F A    Y+ A S S  L      N+  +  G  DD  + +  +T     +   +  S
Sbjct: 201 IVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVHVACGS 260

Query: 239 SSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDA 298
             SQ  C       G VF WG+G    L  G  +G +           PK+++  + ++ 
Sbjct: 261 GDSQTLC---VTASGIVFSWGDGDYGKLGRGGTDGSKT----------PKIVDKLLDINV 307

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
             + CG + +  +T  G++++WG+G   +LGHG E  V YPK+I++L    I  ++ G  
Sbjct: 308 VKVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDKKIKDLSVGTT 367

Query: 359 HTCAVTLSGDLYTWG 373
           H  A+T    +Y WG
Sbjct: 368 HILALTEDQFVYGWG 382


>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
 gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            1; AltName: Full=p532; AltName: Full=p619
 gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
 gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
          Length = 4861

 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3998 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4044

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4105 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4210

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  + V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4268

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4328

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 4329 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4357



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G           +   L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGT----------QEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + D++ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 159/330 (48%), Gaps = 30/330 (9%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4052

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4053 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4157

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4217

Query: 550  QLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +LG   ST K  P +I+  +    I+ +ACG+     ++    VYT+G+     L  G  
Sbjct: 4218 KLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             N   P  +  L    ++ V  G+  T A+
Sbjct: 4277 RNHNRPQQIPVLAGVIIEDVAVGAEHTLAL 4306



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 139/278 (50%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      +P       +  Q+    CG   T  I + G + 
Sbjct: 3998 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFSQAQQV---ICGQNCTFVIQANGTVL 4049

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4099

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+
Sbjct: 4100 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4157

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4216

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  ++ L    +K V CG+ F+ A+
Sbjct: 4217 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   ++ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4287 VLAGVIIED---VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGK 4343

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 4344 NVRQISAGRCHSAAWT 4359


>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
          Length = 4862

 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 124/389 (31%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3998 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4044

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4105 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4210

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  + V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4268

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGMIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4328

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K ++ +  G   +AA
Sbjct: 4329 NHVREPTLVTGLQGKNIRQISAGRCHSAA 4357



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + D++ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 159/330 (48%), Gaps = 30/330 (9%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4052

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4053 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4157

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4217

Query: 550  QLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +LG   ST K  P +I+  +    I+ +ACG+     ++    VYT+G+     L  G  
Sbjct: 4218 KLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             N   P  +  L    ++ V  G+  T A+
Sbjct: 4277 RNHNRPQQIPVLAGMIIEDVAVGAEHTLAL 4306



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 138/276 (50%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG G H     GQ++E    +    +      Q   + CG   T  I + G +   
Sbjct: 3998 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLAC 4051

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 4099

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+ G
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159

Query: 545  SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQ 602
            + DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  G+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4218

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G++  K +P  ++ L    +K V CG+ F+ A+
Sbjct: 4219 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   ++ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4287 VLAGMIIED---VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGK 4343

Query: 349  NIHMVACGEFHTCAVT 364
            NI  ++ G  H+ A T
Sbjct: 4344 NIRQISAGRCHSAAWT 4359


>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 isoform 1 [Canis lupus familiaris]
          Length = 4861

 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3998 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4044

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4105 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4210

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4268

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4328

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K ++ +  G   +AA
Sbjct: 4329 NHVREPTLVTVLQGKNIRQISAGRCHSAA 4357



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 188/391 (48%), Gaps = 38/391 (9%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL---DAQSIACGSKHAVL 310
           +V++WG    + L+ G                  K+L+  + L   DAQ+I  G     +
Sbjct: 373 EVYVWGSNSSHQLVEGTQE---------------KILQPKMALSFSDAQTIEAGQYCTFV 417

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSG 367
           ++  G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G
Sbjct: 418 ISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEG 477

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           ++++WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+
Sbjct: 478 EVFSWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           G+G FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + 
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRT 582

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           ++++G G  G+LGHGD      P  V+    +   KV  G   ++ALT+TGQV++ G   
Sbjct: 583 VWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGA 642

Query: 548 YGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
               GS  +T   P  IE     R + DI+ G      +   +EVY WG  + GQ G G+
Sbjct: 643 CLGCGSSEATALRPKLIEELAATRIV-DISIGDSXCLALRHDNEVYAWGNNSMGQCGQGN 701

Query: 608 NENKQT-PTLVEALRDKQVKSVVCGSNFTAA 637
           +    T P  V  L    ++ +  G++ + A
Sbjct: 702 STGPITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 167/335 (49%), Gaps = 23/335 (6%)

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
           A +V++  +++ WG  S  +L  G +  +  PK+  AL+ S+   +  G++ T  ++  G
Sbjct: 365 APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKM--ALSFSDAQTIEAGQYCTFVISTDG 422

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            +   G G +    LG  +  S              ++SS      HT A T+ G++F++
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTAAIVEVAGKTSGSNGLSSK 486
           GDG +G LGHG+ S+   P+ ++   + K V+  S G  H+AA+ E              
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------------DG 530

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS-FCKVACGHSITIALTATGQ-VFSMG 544
           +L+TWG+G  G+LGHGD+  R +P  VK   DIS   +V+CG S TIAL+  G+ V+S G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVWSFG 587

Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
             D G+LG   +   +  ++   ++  +I  +  GS     ++S  +VY WG GA   LG
Sbjct: 588 GGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGAC--LG 645

Query: 605 HGDNE-NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G +E     P L+E L   ++  +  G +   A+
Sbjct: 646 CGSSEATALRPKLIEELAATRIVDISIGDSXCLAL 680



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4052

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4053 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4157

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4217

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4218 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4277

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  +  L    ++ V  G+  T A+
Sbjct: 4278 NHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4306



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 139/278 (50%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      +P       +  Q+    CG   T  I + G + 
Sbjct: 3998 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFSQAQQV---ICGQNCTFVIQANGTVL 4049

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4099

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+
Sbjct: 4100 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4157

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4216

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4217 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4254



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 160/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P+ V   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKPKVVEA-LQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G     A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDISIGDSXCLALRH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P +VEAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4287 VLAGVVIED---VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 4343

Query: 349  NIHMVACGEFHTCAVT 364
            NI  ++ G  H+ A T
Sbjct: 4344 NIRQISAGRCHSAAWT 4359


>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
          Length = 4859

 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3996 DVYLWGAG-RHGQLAEA----------GRNVMVPATAPS--FSQAQQVICGQNCTFVIQA 4042

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4103 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4208

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4266

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4267 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4326

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K ++ +  G   +AA
Sbjct: 4327 NHVREPTLVTVLQGKNIRQISAGRCHSAA 4355



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G           +   L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGT----------QEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVPATAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4050

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4051 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4107

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4108 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4155

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4156 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4215

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4216 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4275

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  +  L    ++ V  G+  T A+
Sbjct: 4276 NHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4304



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 138/276 (50%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG G H     GQ++E    +    +      Q   + CG   T  I + G +   
Sbjct: 3996 DVYLWGAGRH-----GQLAEAGRNVMVPATAPSFS-QAQQVICGQNCTFVIQANGTVLAC 4049

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 4097

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+ G
Sbjct: 4098 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4157

Query: 545  SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQ 602
            + DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  G+
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4216

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4217 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4252



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  ++                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDISIGDSHCLSLSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4285 VLAGVVIED---VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 4341

Query: 349  NIHMVACGEFHTCAVT 364
            NI  ++ G  H+ A T
Sbjct: 4342 NIRQISAGRCHSAAWT 4357


>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
            garnettii]
          Length = 4828

 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3965 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4011

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4012 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4071

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4072 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4128

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4129 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4177

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4178 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4235

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4236 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4295

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K ++ +  G   +AA
Sbjct: 4296 NHVREPTLVTVLQGKNIRQISAGRCHSAA 4324



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G           +   L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGT----------QEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3966 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4019

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4020 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4076

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4077 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4124

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4125 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4184

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4185 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4244

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  +  L    ++ V  G+  T A+
Sbjct: 4245 NHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4273



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 138/276 (50%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG G H     GQ++E    +    +      Q   + CG   T  I + G +   
Sbjct: 3965 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLAC 4018

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 4019 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 4066

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+ G
Sbjct: 4067 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4126

Query: 545  SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQ 602
            + DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  G+
Sbjct: 4127 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4185

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4186 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4221



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4254 VLAGVVIED---VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 4310

Query: 349  NIHMVACGEFHTCAVT 364
            NI  ++ G  H+ A T
Sbjct: 4311 NIRQISAGRCHSAAWT 4326


>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
          Length = 4861

 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3998 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4044

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4105 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4210

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  + V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4268

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4328

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 4329 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4357



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + D++ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 159/330 (48%), Gaps = 30/330 (9%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4052

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4053 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4157

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4217

Query: 550  QLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +LG   ST K  P +I+  +    I+ +ACG+     ++    VYT+G+     L  G  
Sbjct: 4218 KLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             N   P  +  L    ++ V  G+  T A+
Sbjct: 4277 RNHNRPQQIPVLAGVIIEDVAVGAEHTLAL 4306



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 139/278 (50%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      +P       +  Q+    CG   T  I + G + 
Sbjct: 3998 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFSQAQQV---ICGQNCTFVIQANGTVL 4049

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4099

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+
Sbjct: 4100 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4157

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4216

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  ++ L    +K V CG+ F+ A+
Sbjct: 4217 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   ++ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4287 VLAGVIIED---VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGK 4343

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 4344 NVRQISAGRCHSAAWT 4359


>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
            boliviensis boliviensis]
          Length = 4860

 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3997 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4043

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4104 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4160

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4161 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------VVWA 4209

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4210 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4267

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4268 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4327

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 4328 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4356



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G           +   L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGT----------QEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + D++ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4051

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4052 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4108

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4109 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4156

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV-FSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G V ++ G  DYG
Sbjct: 4157 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYG 4216

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4217 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4276

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  +  L    ++ V  G+  T A+
Sbjct: 4277 NHNRPQQIPVLAGVIIEDVAVGAEHTLAL 4305



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 139/278 (50%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      +P       +  Q+    CG   T  I + G + 
Sbjct: 3997 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFSQAQQV---ICGQNCTFVIQANGTVL 4048

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4049 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4098

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+
Sbjct: 4099 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4156

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  
Sbjct: 4157 FGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDY 4215

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4216 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4253



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   ++ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4286 VLAGVIIED---VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGK 4342

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 4343 NVRQISAGRCHSAAWT 4358


>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
          Length = 4870

 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 4007 DVYLWGAG-RHGQLAEA----------GRNVMVPATAPS--FSQAQQVICGQNCTFVIQA 4053

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4054 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4113

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4114 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4170

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4171 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4219

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4220 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4277

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4278 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4337

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K ++ +  G   +AA
Sbjct: 4338 NHVREPTLVTVLQGKNIRQISAGRCHSAA 4366



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G           +   L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGT----------QEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 4008 VYLWGAGRHGQLAEAGRNVMVPATAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4061

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4062 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4118

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4119 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4166

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4167 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4226

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4227 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4286

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  +  L    ++ V  G+  T A+
Sbjct: 4287 NHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4315



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 138/276 (50%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG G H     GQ++E    +    +      Q   + CG   T  I + G +   
Sbjct: 4007 DVYLWGAGRH-----GQLAEAGRNVMVPATAPSFS-QAQQVICGQNCTFVIQANGTVLAC 4060

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 4061 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 4108

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+ G
Sbjct: 4109 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4168

Query: 545  SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQ 602
            + DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  G+
Sbjct: 4169 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4227

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4228 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4263



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  ++                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDISIGDSHCLSLSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4296 VLAGVVIED---VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 4352

Query: 349  NIHMVACGEFHTCAVT 364
            NI  ++ G  H+ A T
Sbjct: 4353 NIRQISAGRCHSAAWT 4368


>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3996 DVYLWGAG-RHGQLAEA----------GRNVMVPATAPS--FSQAQQVICGQNCTFVIQA 4042

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4103 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4208

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4266

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4267 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4326

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K ++ +  G   +AA
Sbjct: 4327 NHVREPTLVTVLQGKNIRQISAGRCHSAA 4355



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G           +   L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGT----------QEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVPATAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4050

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4051 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4107

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4108 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4155

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4156 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4215

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4216 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4275

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  +  L    ++ V  G+  T A+
Sbjct: 4276 NHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4304



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 138/276 (50%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG G H     GQ++E    +    +      Q   + CG   T  I + G +   
Sbjct: 3996 DVYLWGAGRH-----GQLAEAGRNVMVPATAPSFS-QAQQVICGQNCTFVIQANGTVLAC 4049

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 4097

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+ G
Sbjct: 4098 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4157

Query: 545  SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQ 602
            + DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  G+
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4216

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4217 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4252



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  ++                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDISIGDSHCLSLSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4285 VLAGVVIED---VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 4341

Query: 349  NIHMVACGEFHTCAVT 364
            NI  ++ G  H+ A T
Sbjct: 4342 NIRQISAGRCHSAAWT 4357


>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3996 DVYLWGAG-RHGQLAEA----------GRNVMVPATAPS--FSQAQQVICGQNCTFVIQA 4042

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4103 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4208

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4266

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4267 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4326

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K ++ +  G   +AA
Sbjct: 4327 NHVREPTLVTVLQGKNIRQISAGRCHSAA 4355



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G           +   L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGT----------QEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVPATAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4050

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4051 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4107

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4108 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4155

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4156 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4215

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4216 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4275

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  +  L    ++ V  G+  T A+
Sbjct: 4276 NHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4304



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 138/276 (50%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG G H     GQ++E    +    +      Q   + CG   T  I + G +   
Sbjct: 3996 DVYLWGAGRH-----GQLAEAGRNVMVPATAPSFS-QAQQVICGQNCTFVIQANGTVLAC 4049

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 4097

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+ G
Sbjct: 4098 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4157

Query: 545  SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQ 602
            + DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  G+
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4216

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4217 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4252



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  ++                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDISIGDSHCLSLSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4285 VLAGVVIED---VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 4341

Query: 349  NIHMVACGEFHTCAVT 364
            NI  ++ G  H+ A T
Sbjct: 4342 NIRQISAGRCHSAAWT 4357


>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Cricetulus griseus]
          Length = 4859

 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3996 DVYLWGAG-RHGQLAEA----------GRNVMVPATAPS--FSQAQQVICGQNCTFVIQA 4042

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4043 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4102

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4103 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4159

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4160 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4208

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4209 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4266

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4267 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4326

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K ++ +  G   +AA
Sbjct: 4327 NHVREPTLVTVLQGKNIRQISAGRCHSAA 4355



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G           +   L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGT----------QEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3997 VYLWGAGRHGQLAEAGRNVMVPATAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4050

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4051 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4107

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4108 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4155

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4156 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4215

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4216 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4275

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  +  L    ++ V  G+  T A+
Sbjct: 4276 NHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4304



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 138/276 (50%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG G H     GQ++E    +    +      Q   + CG   T  I + G +   
Sbjct: 3996 DVYLWGAGRH-----GQLAEAGRNVMVPATAPSFS-QAQQVICGQNCTFVIQANGTVLAC 4049

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 4097

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+ G
Sbjct: 4098 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4157

Query: 545  SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQ 602
            + DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  G+
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 4216

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4217 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4252



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  ++                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDISIGDSHCLSLSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4285 VLAGVVIED---VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 4341

Query: 349  NIHMVACGEFHTCAVT 364
            NI  ++ G  H+ A T
Sbjct: 4342 NIRQISAGRCHSAAWT 4357


>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4846

 Score =  182 bits (462), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3983 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4029

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4030 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4089

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4090 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4146

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4147 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------VVWA 4195

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4196 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4253

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4254 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4313

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K ++ +  G   +AA
Sbjct: 4314 NHVREPTLVTVLQGKNIRQISAGRCHSAA 4342



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G           +   L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGT----------QEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   +++LT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3984 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4037

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4038 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4094

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4095 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4142

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV-FSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G V ++ G  DYG
Sbjct: 4143 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYG 4202

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4203 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4262

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  +  L    ++ V  G+  T A+
Sbjct: 4263 NHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4291



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 165/335 (49%), Gaps = 23/335 (6%)

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
           A +V++  +++ WG  S  +L  G +  +  PKL  +   S+   +  G++ T  ++  G
Sbjct: 365 APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTDG 422

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            +   G G +    LG  +  S              ++SS      HT A T+ G++F++
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTAAIVEVAGKTSGSNGLSSK 486
           GDG +G LGHG+ S+   P+ ++   + K V+  S G  H+AA+ E              
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------------DG 530

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS-FCKVACGHSITIALTATGQ-VFSMG 544
           +L+TWG+G  G+LGHGD+  R +P  VK   DIS   +V+CG S TIAL+  G+ V+S G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVWSFG 587

Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
             D G+LG   +   +  ++   ++  +I  +  GS     ++S  +VY WG GA   LG
Sbjct: 588 GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGAC--LG 645

Query: 605 HGDNE-NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G +E     P L+E L   ++  +  G +   A+
Sbjct: 646 CGSSEATALRPKLIEELAATRIVDISIGDSHCLAL 680



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 138/276 (50%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG G H     GQ++E    +    +      Q   + CG   T  I + G +   
Sbjct: 3983 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLAC 4036

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 4084

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+ G
Sbjct: 4085 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4144

Query: 545  SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQ 602
            + DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  G+
Sbjct: 4145 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGK 4203

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4204 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4239



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + ++TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4272 VLAGVVIED---VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 4328

Query: 349  NIHMVACGEFHTCAVT 364
            NI  ++ G  H+ A T
Sbjct: 4329 NIRQISAGRCHSAAWT 4344


>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4853

 Score =  182 bits (462), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3990 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4036

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4037 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4096

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4097 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4153

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4154 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------VVWA 4202

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4203 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4260

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4261 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 4320

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K ++ +  G   +AA
Sbjct: 4321 NHVREPTLVTVLQGKNIRQISAGRCHSAA 4349



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G           +   L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGT----------QEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   +++LT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3991 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4044

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4045 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4101

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4102 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4149

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV-FSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G V ++ G  DYG
Sbjct: 4150 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYG 4209

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4210 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4269

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  +  L    ++ V  G+  T A+
Sbjct: 4270 NHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4298



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 165/335 (49%), Gaps = 23/335 (6%)

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
           A +V++  +++ WG  S  +L  G +  +  PKL  +   S+   +  G++ T  ++  G
Sbjct: 365 APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSF--SDAQTIEAGQYCTFVISTDG 422

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            +   G G +    LG  +  S              ++SS      HT A T+ G++F++
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTAAIVEVAGKTSGSNGLSSK 486
           GDG +G LGHG+ S+   P+ ++   + K V+  S G  H+AA+ E              
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------------DG 530

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS-FCKVACGHSITIALTATGQ-VFSMG 544
           +L+TWG+G  G+LGHGD+  R +P  VK   DIS   +V+CG S TIAL+  G+ V+S G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVWSFG 587

Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
             D G+LG   +   +  ++   ++  +I  +  GS     ++S  +VY WG GA   LG
Sbjct: 588 GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGAC--LG 645

Query: 605 HGDNE-NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G +E     P L+E L   ++  +  G +   A+
Sbjct: 646 CGSSEATALRPKLIEELAATRIVDISIGDSHCLAL 680



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 138/276 (50%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG G H     GQ++E    +    +      Q   + CG   T  I + G +   
Sbjct: 3990 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLAC 4043

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 4044 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 4091

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+ G
Sbjct: 4092 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4151

Query: 545  SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQ 602
            + DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  G+
Sbjct: 4152 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGK 4210

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4211 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4246



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + ++TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4279 VLAGVVIED---VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 4335

Query: 349  NIHMVACGEFHTCAVT 364
            NI  ++ G  H+ A T
Sbjct: 4336 NIRQISAGRCHSAAWT 4351


>gi|449476265|ref|XP_004154689.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 171

 Score =  182 bits (462), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 95/185 (51%), Positives = 118/185 (63%), Gaps = 24/185 (12%)

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
           +++V    + FSWGE  GG+LGHG E+D  +PKLIDAL+   + +VACGE HTCAVTLS 
Sbjct: 4   SLVVEHFSEFFSWGEEYGGRLGHGGESDAHHPKLIDALSNLKVELVACGECHTCAVTLSN 63

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           DLYTWGDG +N  +LG  ++ SHWIPR+V                  TA +  AGKLF  
Sbjct: 64  DLYTWGDGTYN-SVLGHGNDASHWIPRRV------------------TALVICAGKLF-- 102

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
              TFGALGH DR S S+ +EVE+LK L+T  A+CGVWHT A++EV       N  S  K
Sbjct: 103 ---TFGALGHKDRDSISISKEVESLKGLRTARAACGVWHTIAVLEVIIGNPNWNNNSLGK 159

Query: 488 LFTWG 492
           LFTWG
Sbjct: 160 LFTWG 164



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 48/190 (25%)

Query: 252 LGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
             + F WGE  G  L  G             DA  PK++++   L  + +ACG  H   V
Sbjct: 10  FSEFFSWGEEYGGRLGHGG----------ESDAHHPKLIDALSNLKVELVACGECHTCAV 59

Query: 312 TKQGQIFSWGEGS-GGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           T    +++WG+G+    LGHG +A    P+ + AL                 V  +G L+
Sbjct: 60  TLSNDLYTWGDGTYNSVLGHGNDASHWIPRRVTAL-----------------VICAGKLF 102

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI------------ 418
           T+       G LG     S  I ++V   ++GL+ +   CG WHT A+            
Sbjct: 103 TF-------GALGHKDRDSISISKEVE-SLKGLRTARAACGVWHTIAVLEVIIGNPNWNN 154

Query: 419 TSAGKLFTFG 428
            S GKLFT+G
Sbjct: 155 NSLGKLFTWG 164



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/188 (25%), Positives = 77/188 (40%), Gaps = 47/188 (25%)

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           + F++G+   G LGHG  S    P+ ++ L  LK  + +CG  HT A+            
Sbjct: 12  EFFSWGEEYGGRLGHGGESDAHHPKLIDALSNLKVELVACGECHTCAVT----------- 60

Query: 483 LSSKKLFTWGDGAEGQ-LGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             S  L+TWGDG     LGHG+     +P                   +T  +   G++F
Sbjct: 61  -LSNDLYTWGDGTYNSVLGHGNDASHWIP-----------------RRVTALVICAGKLF 102

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVV-----------SSK 589
           +     +G LG         ++   ++K       ACG +H IAV+           +S 
Sbjct: 103 T-----FGALGHKDRDSISISKEVESLKGLRTARAACGVWHTIAVLEVIIGNPNWNNNSL 157

Query: 590 SEVYTWGK 597
            +++TWG+
Sbjct: 158 GKLFTWGR 165



 Score = 51.2 bits (121), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 9/115 (7%)

Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
           +++ +    + FS G    G+LG  G +     ++   + +  +E +ACG  H   V+  
Sbjct: 3   VSLVVEHFSEFFSWGEEYGGRLGHGGESDAHHPKLIDALSNLKVELVACGECHTCAVTLS 62

Query: 590 SEVYTWGKGA-NGQLGHGDNENKQTPTLVEALRDKQVKSVVC-GSNFTAAICLHK 642
           +++YTWG G  N  LGHG++ +   P  V AL       V+C G  FT     HK
Sbjct: 63  NDLYTWGDGTYNSVLGHGNDASHWIPRRVTAL-------VICAGKLFTFGALGHK 110



 Score = 45.8 bits (107), Expect = 0.11,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 62/154 (40%), Gaps = 25/154 (16%)

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           + F+WG+   G+LGHG       P  +    ++    VACG   T A+T +  +++ G  
Sbjct: 12  EFFSWGEEYGGRLGHGGESDAHHPKLIDALSNLKVELVACGECHTCAVTLSNDLYTWGDG 71

Query: 547 DYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
            Y  +   G+      P R+                   A+V    +++T+G      LG
Sbjct: 72  TYNSVLGHGNDASHWIPRRV------------------TALVICAGKLFTFGA-----LG 108

Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           H D ++      VE+L+  +     CG   T A+
Sbjct: 109 HKDRDSISISKEVESLKGLRTARAACGVWHTIAV 142


>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
          Length = 5345

 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 203/389 (52%), Gaps = 31/389 (7%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            +VF WG    + L  G   G +I         LP + ++   L    I  GSK    VT+
Sbjct: 3465 NVFCWGLNDKDQL--GGPKGSKIK--------LPTLNDNLSALRCVQIVGGSKSLFCVTQ 3514

Query: 314  QGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLY 370
            +G++++ GE + G+LG G+    VS P+ I +L+   I  VA   G  H+ A+T  G ++
Sbjct: 3515 EGKVYACGEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVF 3574

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WG+G  + G LG  S  +   PR +   ++  ++  I CG  H+AAITS G L+T+G G
Sbjct: 3575 SWGEG--DDGKLGHFSRWNCDKPRLIEA-LKSKRVRDIACGSSHSAAITSNGDLYTWGLG 3631

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLF 489
             +G LGHGD ++   P++V+ L   + V  +CG            + + +  L+ + K++
Sbjct: 3632 EYGRLGHGDNTTQLKPKQVKALAHERVVQVACG-----------SRDAQTLALTDEGKVY 3680

Query: 490  TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
            +WGDG  G+LG G +E   VP  V    D   C++ CG   ++ALT +GQV++ G  DY 
Sbjct: 3681 SWGDGDFGKLGRGGSEGCNVPHEVDRLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYF 3740

Query: 550  QLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +LG    +  + P  +EG +K + I  +A G+ H   V+   +V+ WG   +GQ G+G  
Sbjct: 3741 RLGHGTDAHVRKPQIVEG-LKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQQGNGTT 3799

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
               + P LV  L   ++  V CGS+ + A
Sbjct: 3800 TVNRKPALV-VLEGYKISKVACGSSHSIA 3827



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 195/399 (48%), Gaps = 25/399 (6%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            + G G ++ WG     G LGG V+G ++          P   E+  V     +  G +  
Sbjct: 4457 WGGSGQIWGWGHN-HRGQLGG-VDGAKVKQ--------PVSCEALAVTRPIQLVGGEQTL 4506

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT +G++F+ G G+GG+LG G    VS+P  ++++    I  +A   G  H  A++  
Sbjct: 4507 FAVTAEGKVFATGYGAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSAE 4566

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G++Y+WG+G    G LG  +      PR V   + G ++  I  G  H+A IT+ G+L+T
Sbjct: 4567 GEVYSWGEG--EDGKLGHGNRSPCDRPR-VIDSLRGKEVVDIAAGGAHSACITANGELYT 4623

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+ VE LK  + V  +CG          +G           
Sbjct: 4624 WGKGRYGRLGHGDSEDQPRPKLVEALKSYRVVDMACG----------SGDAQTLCITDDD 4673

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   VP+ ++        KV CG   ++ALT +G V++ G  
Sbjct: 4674 NVWSWGDGDYGKLGRGGSDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKG 4733

Query: 547  DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            DY +LG          R    ++++ + D+ACGS H    +   EV++WG    GQLG G
Sbjct: 4734 DYHRLGHGSDDHVRRPRKVSALQNKKVIDVACGSLHCVACTDTGEVFSWGDNDEGQLGDG 4793

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVS 645
                 Q P LV +L  K++  V CGS  + A   +K VS
Sbjct: 4794 TTNAIQRPRLVASLLGKKINRVACGSAHSLAWSTNKAVS 4832



 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 168/330 (50%), Gaps = 20/330 (6%)

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            Q  +F WG     +LG    + +  P L D L+      +  G      VT  G +Y  G
Sbjct: 3463 QTNVFCWGLNDKDQLGGPKGSKIKLPTLNDNLSALRCVQIVGGSKSLFCVTQEGKVYACG 3522

Query: 374  DGIH-NLGLLGQVSEISHWIPRKVSGQMEG-LQISSICCGPWHTAAITSAGKLFTFGDGT 431
            +  +  LGL      +S  +PR+++   +  ++  ++  G  H+ A+T+ GK+F++G+G 
Sbjct: 3523 EATNGRLGLGITTGTVS--VPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGD 3580

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
             G LGH  R +   PR +E LK  +    +CG  H+AAI         SNG     L+TW
Sbjct: 3581 DGKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAIT--------SNG----DLYTW 3628

Query: 492  GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYG 549
            G G  G+LGHGD   ++ P  VK        +VACG   + T+ALT  G+V+S G  D+G
Sbjct: 3629 GLGEYGRLGHGDNTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGDFG 3688

Query: 550  QLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +LG  GS G   P  ++  ++ + +  I CG+     ++   +V+TWGKG   +LGHG +
Sbjct: 3689 KLGRGGSEGCNVPHEVD-RLRDQKVCQIECGAQFSLALTKSGQVWTWGKGDYFRLGHGTD 3747

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             + + P +VE L+ K++  V  G+    A+
Sbjct: 3748 AHVRKPQIVEGLKGKKIVHVAVGALHCLAV 3777



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 141/280 (50%), Gaps = 15/280 (5%)

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
           H   +T  G++++WG+G  + G LG     +H  P  ++G + G Q++ ICCG  ++ A+
Sbjct: 630 HYMGLTSDGEVFSWGNG--DGGKLGHGDYQNHEEPALITG-LSGKQVAKICCGSSYSVAL 686

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           TS G+++++G G FG LGHG     + P  ++  K  + V  +CG          +G   
Sbjct: 687 TSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACG----------SGDAQ 736

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
                 S  +++WGDG  G+LG G  +    P  ++        +V CG+  ++ALT +G
Sbjct: 737 TLAVTDSGAVYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSG 796

Query: 539 QVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
            V++ G  D  +LG       + P +IE  +  + ++DIA GS H   ++   E+Y WG+
Sbjct: 797 AVYTWGKGDNYRLGHGTEDHARHPKQIEA-LSSKKVKDIAIGSLHCMAITEDGELYGWGR 855

Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              GQLG+    N   PTL+  +  K +  V CG   T A
Sbjct: 856 NEQGQLGNPSISNFTEPTLIGGMEGKNIIGVACGPTQTFA 895



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 138/278 (49%), Gaps = 21/278 (7%)

Query: 306 KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTL 365
           KH + +T  G++FSWG G GGKLGHG   +   P LI  L+G  +  + CG  ++ A+T 
Sbjct: 629 KHYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALTS 688

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGK 423
           +G++Y+WG G  N G LG  S      P  +    +G +I  + CG     T A+T +G 
Sbjct: 689 NGEVYSWGKG--NFGRLGHGSSEDQTTPMLLKF-FKGHRIVDVACGSGDAQTLAVTDSGA 745

Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
           ++++GDG +G LG G       P+ +E L     V   CG   + A+ +           
Sbjct: 746 VYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTK----------- 794

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
            S  ++TWG G   +LGHG  +    P  ++         +A G    +A+T  G+++  
Sbjct: 795 -SGAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITEDGELYGW 853

Query: 544 GSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACG 579
           G  + GQLG+P S   F  PT I G ++ + I  +ACG
Sbjct: 854 GRNEQGQLGNP-SISNFTEPTLI-GGMEGKNIIGVACG 889



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 142/305 (46%), Gaps = 27/305 (8%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           ++S   G  +      G+VF WG G          +G ++   D ++   P ++      
Sbjct: 622 IASHPDGKHYMGLTSDGEVFSWGNG----------DGGKLGHGDYQNHEEPALITGLSGK 671

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               I CGS ++V +T  G+++SWG+G+ G+LGHG   D + P L+    G  I  VAC 
Sbjct: 672 QVAKICCGSSYSVALTSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACG 731

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT SG +Y+WGDG  + G LG+        P KV  ++ G  +  + CG   
Sbjct: 732 SGDAQTLAVTDSGAVYSWGDG--DYGKLGRGGNDGCKTP-KVIEKLMGQDVVRVYCGNQF 788

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           + A+T +G ++T+G G    LGHG       P+++E L   K    + G  H  AI E  
Sbjct: 789 SMALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITE-- 846

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                       +L+ WG   +GQLG+        P  +   +  +   VACG + T A 
Sbjct: 847 ----------DGELYGWGRNEQGQLGNPSISNFTEPTLIGGMEGKNIIGVACGPTQTFAW 896

Query: 535 TATGQ 539
           T+ GQ
Sbjct: 897 TSGGQ 901



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 128/244 (52%), Gaps = 17/244 (6%)

Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
           G  E ++I+S   G  H   +TS G++F++G+G  G LGHGD  +   P  +  L   + 
Sbjct: 615 GDREVIRIASHPDGK-HYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQV 673

Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
               CG  ++ A+         SNG    ++++WG G  G+LGHG +E +  P+ +K   
Sbjct: 674 AKICCGSSYSVALT--------SNG----EVYSWGKGNFGRLGHGSSEDQTTPMLLKFFK 721

Query: 518 DISFCKVACG--HSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIE 574
                 VACG   + T+A+T +G V+S G  DYG+LG  G+ G K P  IE  +    + 
Sbjct: 722 GHRIVDVACGSGDAQTLAVTDSGAVYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVR 781

Query: 575 DIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNF 634
            + CG+     ++    VYTWGKG N +LGHG  ++ + P  +EAL  K+VK +  GS  
Sbjct: 782 -VYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLH 840

Query: 635 TAAI 638
             AI
Sbjct: 841 CMAI 844



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 81/157 (51%), Gaps = 3/157 (1%)

Query: 487  KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSITIALTATGQVFSM 543
            K++  G+   G+LG G     V VP  +         KVA   G   ++ALT  G+VFS 
Sbjct: 3517 KVYACGEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSW 3576

Query: 544  GSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
            G  D G+LG          R+   +K + + DIACGS H A ++S  ++YTWG G  G+L
Sbjct: 3577 GEGDDGKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGRL 3636

Query: 604  GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            GHGDN  +  P  V+AL  ++V  V CGS     + L
Sbjct: 3637 GHGDNTTQLKPKQVKALAHERVVQVACGSRDAQTLAL 3673


>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
          Length = 440

 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 183/348 (52%), Gaps = 18/348 (5%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQG-QIFSWGEGSGGKLGHGVE 333
           ++   D  D   P  L +       S+ CG+ H V  ++ G +++SWG G  G+LGHG  
Sbjct: 46  QLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS 105

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +D+  P  I AL+G  I  +ACG+ H  AVT+ G++ +WG   +  G LG        +P
Sbjct: 106 SDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGR--NQNGQLGLGDTEDSLVP 163

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           +K+    EG+ I  +  G  HTAA+T  G L+ +G G +G LG GDR+   VP  V +  
Sbjct: 164 QKIQ-AFEGIPIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTG 222

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
             K  M +CG  HT ++              S  L+T+G    GQLGHGD E  ++P  +
Sbjct: 223 GEKMSMVACGWRHTISVS------------YSGALYTYGWSKYGQLGHGDLEDHLIPHKL 270

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRY 572
           +   +    +++ G   T+ALT+ G+++  G   +GQ+G   +  +  P ++      + 
Sbjct: 271 EALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 330

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           ++ ++CG  H   V+ ++ V+ WG+G NGQLG G++ ++  P ++EAL
Sbjct: 331 VQ-VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 377



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 171/340 (50%), Gaps = 18/340 (5%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+ G+ H+V +     + SWG G  G+LGHG   D   P  + AL+G  I  V CG  HT
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79

Query: 361 CAVTLSG-DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
            A + SG ++Y+WG G  + G LG  +    + P  +   + G++I  I CG  H  A+T
Sbjct: 80  VAYSQSGMEVYSWGWG--DFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCLAVT 136

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G++ ++G    G LG GD   + VP++++  + +   M + G  HTAA+ E       
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVTE------- 189

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                   L+ WG G  G LG GD   R+VP  V  +       VACG   TI+++ +G 
Sbjct: 190 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 244

Query: 540 VFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           +++ G + YGQLG         P ++E  + + +I  I+ G  H   ++S  ++Y WG  
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDGKLYGWGWN 303

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             GQ+G G+N ++ +P  V    D++V  V CG   T A+
Sbjct: 304 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 343



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 95/187 (50%), Gaps = 19/187 (10%)

Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
           K ++ S G  H+ A+            LS   + +WG G +GQLGHGDAE R  P  +  
Sbjct: 16  KVLIISAGASHSVAL------------LSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA 63

Query: 516 SDDISFCKVACGHSITIALTATG-QVFSMGSADYGQLGSPGSTGKF---PTRIEGNIKHR 571
            D      V CG   T+A + +G +V+S G  D+G+LG   S+  F   P +    I+  
Sbjct: 64  LDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR-- 121

Query: 572 YIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
            I+ IACG  H   V+ + EV +WG+  NGQLG GD E+   P  ++A     +K V  G
Sbjct: 122 -IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIPIKMVAAG 180

Query: 632 SNFTAAI 638
           +  TAA+
Sbjct: 181 AEHTAAV 187



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 3/119 (2%)

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYH 582
           ++ G S ++AL +   V S G  + GQLG   +  +  PT++     H+ +  + CG+ H
Sbjct: 20  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVS-VTCGADH 78

Query: 583 -IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +A   S  EVY+WG G  G+LGHG++ +  TP  ++AL   ++K + CG +   A+ +
Sbjct: 79  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 34/46 (73%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           ++CG +H + VT++  +F+WG G+ G+LG G   D ++PK+I+AL+
Sbjct: 333 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 378


>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
 gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
          Length = 406

 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 184/348 (52%), Gaps = 18/348 (5%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQG-QIFSWGEGSGGKLGHGVE 333
           ++   D  D   P  L +       S+ CG+ H V  ++ G +++SWG G  G+LGHG  
Sbjct: 47  QLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS 106

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +D+  P  I AL+G  I  +ACG+ H  AVT+ G++ +WG   +  G LG        +P
Sbjct: 107 SDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGR--NQNGQLGLGDTEDSLVP 164

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           +K+    EG++I  +  G  HTAA+T  G L+ +G G +G LG GDR+   VP  V +  
Sbjct: 165 QKIQ-AFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTG 223

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
             K  M +CG  HT ++              S  L+T+G    GQLGHGD E  ++P  +
Sbjct: 224 GEKMSMVACGWRHTISVS------------YSGALYTYGWSKYGQLGHGDLEDHLIPHKL 271

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRY 572
           +   +    +++ G   T+ALT+ G+++  G   +GQ+G   +  +  P ++      + 
Sbjct: 272 EALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 331

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           ++ ++CG  H   V+ ++ V+ WG+G NGQLG G++ ++  P ++EAL
Sbjct: 332 VQ-VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 378



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 172/340 (50%), Gaps = 18/340 (5%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+ G+ H+V +     + SWG G  G+LGHG   D   P  + AL+G  I  V CG  HT
Sbjct: 21  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 80

Query: 361 CAVTLSG-DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
            A + SG ++Y+WG G  + G LG  +    + P  +   + G++I  I CG  H  A+T
Sbjct: 81  VAYSQSGMEVYSWGWG--DFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCLAVT 137

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G++ ++G    G LG GD   + VP++++  + ++  M + G  HTAA+ E       
Sbjct: 138 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 190

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                   L+ WG G  G LG GD   R+VP  V  +       VACG   TI+++ +G 
Sbjct: 191 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 245

Query: 540 VFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           +++ G + YGQLG         P ++E  + + +I  I+ G  H   ++S  ++Y WG  
Sbjct: 246 LYTYGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDGKLYGWGWN 304

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             GQ+G G+N ++ +P  V    D++V  V CG   T A+
Sbjct: 305 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 344



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 96/187 (51%), Gaps = 19/187 (10%)

Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
           K ++ S G  H+ A+            LS   + +WG G +GQLGHGDAE R  P  +  
Sbjct: 17  KVLIISAGASHSVAL------------LSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA 64

Query: 516 SDDISFCKVACGHSITIALTATG-QVFSMGSADYGQLGSPGSTGKF---PTRIEGNIKHR 571
            D      V CG   T+A + +G +V+S G  D+G+LG   S+  F   P +    I+  
Sbjct: 65  LDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR-- 122

Query: 572 YIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
            I+ IACG  H   V+ + EV +WG+  NGQLG GD E+   P  ++A    ++K V  G
Sbjct: 123 -IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAG 181

Query: 632 SNFTAAI 638
           +  TAA+
Sbjct: 182 AEHTAAV 188



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 3/119 (2%)

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYH 582
           ++ G S ++AL +   V S G  + GQLG   +  +  PT++     H+ +  + CG+ H
Sbjct: 21  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVS-VTCGADH 79

Query: 583 -IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +A   S  EVY+WG G  G+LGHG++ +  TP  ++AL   ++K + CG +   A+ +
Sbjct: 80  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTM 138



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 34/46 (73%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           ++CG +H + VT++  +F+WG G+ G+LG G   D ++PK+I+AL+
Sbjct: 334 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 379


>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2441

 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 1578 DVYLWGAGR-HGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 1624

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 1625 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 1684

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 1685 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 1741

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 1742 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 1790

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  + V   I   KVACG   ++ALT  G V++ G      
Sbjct: 1791 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 1848

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 1849 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 1908

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 1909 NHVREPTLVTGLQGKNVRQISAGRCHSAA 1937



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 159/330 (48%), Gaps = 30/330 (9%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 1579 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 1632

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 1633 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 1689

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 1690 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 1737

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 1738 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 1797

Query: 550  QLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +LG   ST K  P +I+  +    I+ +ACG+     ++    VYT+G+     L  G  
Sbjct: 1798 KLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 1856

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             N   P  +  L    ++ V  G+  T A+
Sbjct: 1857 RNHNRPQQIPVLAGVIIEDVAVGAEHTLAL 1886



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 138/276 (50%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG G H     GQ++E    +    +      Q   + CG   T  I + G +   
Sbjct: 1578 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLAC 1631

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 1632 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 1679

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+ G
Sbjct: 1680 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 1739

Query: 545  SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQ 602
            + DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  G+
Sbjct: 1740 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 1798

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G++  K +P  ++ L    +K V CG+ F+ A+
Sbjct: 1799 LGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 1834



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   ++ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 1867 VLAGVIIED---VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGK 1923

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 1924 NVRQISAGRCHSAAWT 1939


>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
            [Ornithorhynchus anatinus]
          Length = 4866

 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 199/389 (51%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 4003 DVYLWGAG-RHGQLAEA----------GRNVMIPAGAPS--FSQAQQVICGQNCTFVIQA 4049

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4050 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4109

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +T+ GK+FTFG+G
Sbjct: 4110 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTADGKMFTFGNG 4166

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+      T GS       ++ 
Sbjct: 4167 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----STDGS------MVWA 4215

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4216 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4273

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4274 IGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAITSTGDVYAWGSNSEGQLGLGHT 4333

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTL+  L+ K ++ +  G   +AA
Sbjct: 4334 NHVREPTLITVLQGKNIRQISAGRCHSAA 4362



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  +E     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLVEELAATRIV-DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGVAIQQISAGTSHSLA 732



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 154/329 (46%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V      P        S    V CG+  T  +  +G +   G
Sbjct: 4004 VYLWGAGRHGQLAEAGRNVMIPAGAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4057

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4058 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4114

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             +  K+FT
Sbjct: 4115 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------ADGKMFT 4162

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++  G  V++ G  DYG
Sbjct: 4163 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYG 4222

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 4223 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 4282

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  V  L    ++ V  G+  T AI
Sbjct: 4283 NHNRPQQVPVLAGVVIEDVAVGAEHTLAI 4311



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 140/278 (50%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      IP   +G     Q   + CG   T  I + G + 
Sbjct: 4003 DVYLWGAGRH-----GQLAEAGRNVMIP---AGAPSFSQAQQVICGQNCTFVIQANGTVL 4054

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4055 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4104

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +TA G++F+
Sbjct: 4105 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMFT 4162

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  
Sbjct: 4163 FGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDY 4221

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4222 GKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4259



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + VE L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLVEELAATRIVDISIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D ++  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGVAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 55.5 bits (132), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +T  G +++WG  S G+LG G    V  P LI  L G 
Sbjct: 4292 VLAGVVIED---VAVGAEHTLAITSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGK 4348

Query: 349  NIHMVACGEFHTCAVT 364
            NI  ++ G  H+ A T
Sbjct: 4349 NIRQISAGRCHSAAWT 4364


>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 370

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 184/348 (52%), Gaps = 18/348 (5%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQG-QIFSWGEGSGGKLGHGVE 333
           ++   D  D   P  L +       S+ CG+ H V  ++ G +++SWG G  G+LGHG  
Sbjct: 35  QLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS 94

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +D+  P  I AL+G  I  +ACG+ H  AVT+ G++ +WG   +  G LG        +P
Sbjct: 95  SDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGR--NQNGQLGLGDTEDSLVP 152

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           +K+    EG++I  +  G  HTAA+T  G L+ +G G +G LG GDR+   VP  V +  
Sbjct: 153 QKIQ-AFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTG 211

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
             K  M +CG  HT ++              S  L+T+G    GQLGHGD E  ++P  +
Sbjct: 212 GEKMSMVACGWRHTISVS------------YSGALYTYGWSKYGQLGHGDLEDHLIPHKL 259

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRY 572
           +   +    +++ G   T+ALT+ G+++  G   +GQ+G   +  +  P ++      + 
Sbjct: 260 EALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 319

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           ++ ++CG  H   V+ ++ V+ WG+G NGQLG G++ ++  P ++EAL
Sbjct: 320 VQ-VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 366



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 172/340 (50%), Gaps = 18/340 (5%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+ G+ H+V +     + SWG G  G+LGHG   D   P  + AL+G  I  V CG  HT
Sbjct: 9   ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 68

Query: 361 CAVTLSG-DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
            A + SG ++Y+WG G  + G LG  +    + P  +   + G++I  I CG  H  A+T
Sbjct: 69  VAYSQSGMEVYSWGWG--DFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCLAVT 125

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G++ ++G    G LG GD   + VP++++  + ++  M + G  HTAA+ E       
Sbjct: 126 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 178

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                   L+ WG G  G LG GD   R+VP  V  +       VACG   TI+++ +G 
Sbjct: 179 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 233

Query: 540 VFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           +++ G + YGQLG         P ++E  + + +I  I+ G  H   ++S  ++Y WG  
Sbjct: 234 LYTYGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGFRHTMALTSDGKLYGWGWN 292

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             GQ+G G+N ++ +P  V    D++V  V CG   T A+
Sbjct: 293 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 332



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 96/187 (51%), Gaps = 19/187 (10%)

Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
           K ++ S G  H+ A+            LS   + +WG G +GQLGHGDAE R  P  +  
Sbjct: 5   KVLIISAGASHSVAL------------LSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA 52

Query: 516 SDDISFCKVACGHSITIALTATG-QVFSMGSADYGQLGSPGSTGKF---PTRIEGNIKHR 571
            D      V CG   T+A + +G +V+S G  D+G+LG   S+  F   P +    I+  
Sbjct: 53  LDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR-- 110

Query: 572 YIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
            I+ IACG  H   V+ + EV +WG+  NGQLG GD E+   P  ++A    ++K V  G
Sbjct: 111 -IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAG 169

Query: 632 SNFTAAI 638
           +  TAA+
Sbjct: 170 AEHTAAV 176



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 3/119 (2%)

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYH 582
           ++ G S ++AL +   V S G  + GQLG   +  +  PT++     H+ I  + CG+ H
Sbjct: 9   ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ-IVSVTCGADH 67

Query: 583 -IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +A   S  EVY+WG G  G+LGHG++ +  TP  ++AL   ++K + CG +   A+ +
Sbjct: 68  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTM 126



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 34/46 (73%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           ++CG +H + VT++  +F+WG G+ G+LG G   D ++PK+I+AL+
Sbjct: 322 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 367


>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
 gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
          Length = 374

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 184/348 (52%), Gaps = 18/348 (5%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQG-QIFSWGEGSGGKLGHGVE 333
           ++   D  D   P  L +       S+ CG+ H V  ++ G +++SWG G  G+LGHG  
Sbjct: 35  QLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS 94

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +D+  P  I AL+G  I  +ACG+ H  AVT+ G++ +WG   +  G LG        +P
Sbjct: 95  SDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGR--NQNGQLGLGDTEDSLVP 152

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           +K+    EG++I  +  G  HTAA+T  G L+ +G G +G LG GDR+   VP  V +  
Sbjct: 153 QKIQ-AFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTG 211

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
             K  M +CG  HT ++              S  L+T+G    GQLGHGD E  ++P  +
Sbjct: 212 GEKMSMVACGWRHTISVS------------YSGALYTYGWSKYGQLGHGDLEDHLIPHKL 259

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRY 572
           +   +    +++ G   T+ALT+ G+++  G   +GQ+G   +  +  P ++      + 
Sbjct: 260 EALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 319

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           ++ ++CG  H   V+ ++ V+ WG+G NGQLG G++ ++  P ++EAL
Sbjct: 320 VQ-VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 366



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 172/340 (50%), Gaps = 18/340 (5%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+ G+ H+V +     + SWG G  G+LGHG   D   P  + AL+G  I  V CG  HT
Sbjct: 9   ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 68

Query: 361 CAVTLSG-DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
            A + SG ++Y+WG G  + G LG  +    + P  +   + G++I  I CG  H  A+T
Sbjct: 69  VAYSQSGMEVYSWGWG--DFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCLAVT 125

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G++ ++G    G LG GD   + VP++++  + ++  M + G  HTAA+ E       
Sbjct: 126 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 178

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                   L+ WG G  G LG GD   R+VP  V  +       VACG   TI+++ +G 
Sbjct: 179 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 233

Query: 540 VFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           +++ G + YGQLG         P ++E  + + +I  I+ G  H   ++S  ++Y WG  
Sbjct: 234 LYTYGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDGKLYGWGWN 292

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             GQ+G G+N ++ +P  V    D++V  V CG   T A+
Sbjct: 293 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 332



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 96/187 (51%), Gaps = 19/187 (10%)

Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
           K ++ S G  H+ A+            LS   + +WG G +GQLGHGDAE R  P  +  
Sbjct: 5   KVLIISAGASHSVAL------------LSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA 52

Query: 516 SDDISFCKVACGHSITIALTATG-QVFSMGSADYGQLGSPGSTGKF---PTRIEGNIKHR 571
            D      V CG   T+A + +G +V+S G  D+G+LG   S+  F   P +    I+  
Sbjct: 53  LDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR-- 110

Query: 572 YIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
            I+ IACG  H   V+ + EV +WG+  NGQLG GD E+   P  ++A    ++K V  G
Sbjct: 111 -IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAG 169

Query: 632 SNFTAAI 638
           +  TAA+
Sbjct: 170 AEHTAAV 176



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 3/119 (2%)

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYH 582
           ++ G S ++AL +   V S G  + GQLG   +  +  PT++     H+ I  + CG+ H
Sbjct: 9   ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ-IVSVTCGADH 67

Query: 583 -IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +A   S  EVY+WG G  G+LGHG++ +  TP  ++AL   ++K + CG +   A+ +
Sbjct: 68  TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTM 126



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 34/46 (73%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           ++CG +H + VT++  +F+WG G+ G+LG G   D ++PK+I+AL+
Sbjct: 322 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 367


>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
            [Sus scrofa]
          Length = 2561

 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 1609 DVYLWGAGR-HGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 1655

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 1656 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 1715

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 1716 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 1772

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 1773 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 1821

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 1822 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 1879

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 1880 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 1939

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 1940 NHVREPTLVTVLQGKNVRQISAGRCHSAA 1968



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 1610 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 1663

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 1664 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 1720

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 1721 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 1768

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 1769 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 1828

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 1829 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 1888

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  +  L    ++ V  G+  T A+
Sbjct: 1889 NHNRPQQIPVLAGVVIEDVAVGAEHTLAL 1917



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 138/276 (50%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG G H     GQ++E    +    +      Q   + CG   T  I + G +   
Sbjct: 1609 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLAC 1662

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 1663 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 1710

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+ G
Sbjct: 1711 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 1770

Query: 545  SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQ 602
            + DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  G+
Sbjct: 1771 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 1829

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 1830 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 1865



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 1898 VLAGVVIED---VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 1954

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 1955 NVRQISAGRCHSAAWT 1970


>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
            glaber]
          Length = 3493

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/396 (32%), Positives = 200/396 (50%), Gaps = 41/396 (10%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DVF+WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 2623 DVFLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 2669

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 2670 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 2729

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 2730 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 2786

Query: 431  TFGALGHGDRSSTSVPREVETLKEL-------KTVMASCGVWHTAAIVEVAGKTSGSNGL 483
             +G LG G+ S+  +P  V  L+         K+   +CG+ HT A+      T GS   
Sbjct: 2787 DYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVACGLNHTLAV-----STDGS--- 2838

Query: 484  SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
                ++ +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ 
Sbjct: 2839 ---MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTF 2895

Query: 544  GSADYGQLGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
            G      +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + G
Sbjct: 2896 GQDRL--IGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEG 2953

Query: 602  QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            QLG G   + + PTLV  L+ K ++ +  G   +AA
Sbjct: 2954 QLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAA 2989



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 155/336 (46%), Gaps = 35/336 (10%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            +F WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 2624 VFLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 2677

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 2678 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 2734

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 2735 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 2782

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK-------VACGHSITIALTATG-QVFS 542
            +G+G  G+LG G+   + +P  V   +     +       VACG + T+A++  G  V++
Sbjct: 2783 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWA 2842

Query: 543  MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
             G  DYG+LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     
Sbjct: 2843 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIG 2902

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            L  G   N   P  V  L    ++ V  G+  T A+
Sbjct: 2903 LPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAL 2938



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 138/282 (48%), Gaps = 29/282 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D++ WG G H     GQ++E    +    +      Q   + CG   T  I + G +   
Sbjct: 2623 DVFLWGAGRH-----GQLAEAGRNVMVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLAC 2676

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 2677 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 2724

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+ G
Sbjct: 2725 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 2784

Query: 545  SADYGQLG-SPGSTGKFPTRIEGNIKHRYIE------DIACGSYH-IAVVSSKSEVYTWG 596
            + DYG+LG    S  K P R+     ++  +       +ACG  H +AV +  S V+ +G
Sbjct: 2785 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVACGLNHTLAVSTDGSMVWAFG 2844

Query: 597  KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G  G+LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 2845 DGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 2886



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 2919 VLAGVVIED---VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 2975

Query: 349  NIHMVACGEFHTCAVT 364
            NI  ++ G  H+ A T
Sbjct: 2976 NIRQISAGRCHSAAWT 2991


>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
            gorilla gorilla]
          Length = 4502

 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/389 (31%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3639 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 3685

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 3686 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 3745

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 3746 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 3802

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 3803 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 3851

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  + V   I   KVACG   ++ALT  G V++ G      
Sbjct: 3852 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 3909

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 3910 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 3969

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PT+V  L+ K V+ +  G   +AA
Sbjct: 3970 NHVREPTVVTGLQGKNVRQISAGRCHSAA 3998



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G           +   L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGT----------QEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE  +    I D++ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 159/330 (48%), Gaps = 30/330 (9%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3640 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 3693

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 3694 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 3750

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 3751 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 3798

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 3799 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 3858

Query: 550  QLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +LG   ST K  P +I+  +    I+ +ACG+     ++    VYT+G+     L  G  
Sbjct: 3859 KLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 3917

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             N   P  +  L    ++ V  G+  T A+
Sbjct: 3918 RNHNRPQQIPVLAGVIIEDVAVGAEHTLAL 3947



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 139/278 (50%), Gaps = 28/278 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      +P       +  Q+    CG   T  I + G + 
Sbjct: 3639 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFSQAQQV---ICGQNCTFVIQANGTVL 3690

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 3691 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 3740

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+
Sbjct: 3741 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 3798

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  
Sbjct: 3799 FGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 3857

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  ++ L    +K V CG+ F+ A+
Sbjct: 3858 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 3895



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   ++ D   +A G++H + +   G +++WG  S G+LG G    V  P ++  L G 
Sbjct: 3928 VLAGVIIED---VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTVVTGLQGK 3984

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 3985 NVRQISAGRCHSAAWT 4000


>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 513

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 129/397 (32%), Positives = 195/397 (49%), Gaps = 73/397 (18%)

Query: 246 HEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGS 305
           H++  GL  V+ WG G    L  G  N       D+   +L   L+S  V+    +ACGS
Sbjct: 2   HQEVAGL--VYSWGRGEDGQLGLGDTN-------DQDRPVLVDALKSKGVV---QVACGS 49

Query: 306 KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTL 365
            H V++++ G +++WG G  G+LGHG       P++++AL G  I    CG +HT AVT 
Sbjct: 50  GHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTD 109

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG-QMEGLQISSICCGPWHTAAITSAGKL 424
            G+LYTWG G++  G LG  +E  H  P  V   + EG +++ I CG  HT  +T  GK+
Sbjct: 110 KGELYTWGGGMY--GKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLTDLGKV 167

Query: 425 FTFGDGTFGALGHGDRSSTS-VPREVETLKELKTV--MASCGVWHTAAIVEVAGKTSGSN 481
           +T+GD   G +GH +      +PR +E+L+  KTV  +A+CG +HTAA+           
Sbjct: 168 YTWGDKENGVVGHTNADGHQYLPRMLESLQA-KTVTQVAACG-FHTAALT---------- 215

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             ++ ++FTWG+G  G+LGHG    ++VP  V+         VACG   + A+  +G+++
Sbjct: 216 --AAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELY 273

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           + G  ++GQ                                         VYT+G G +G
Sbjct: 274 TWGGGEHGQ-----------------------------------------VYTFGNGDHG 292

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +LGHGD      PTLV  L    V  V   +  TAA+
Sbjct: 293 KLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAAL 329



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 111/234 (47%), Gaps = 56/234 (23%)

Query: 252 LGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           LG V+ WG+   NG++G        ++AD     LP++LES        +A    H   +
Sbjct: 164 LGKVYTWGDK-ENGVVGH-------TNADGHQ-YLPRMLESLQAKTVTQVAACGFHTAAL 214

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           T  G+IF+WGEG  G+LGHG+E +   P++++AL G  +  VACG FH+ A+  SG+LYT
Sbjct: 215 TAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVACGGFHSAAILDSGELYT 274

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG G H                                            G+++TFG+G 
Sbjct: 275 WGGGEH--------------------------------------------GQVYTFGNGD 290

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            G LGHGD    SVP  V  L ++  V  +    HTAA+   AG +S +  LSS
Sbjct: 291 HGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAAL---AGASSSTPALSS 341


>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
          Length = 306

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/307 (35%), Positives = 169/307 (55%), Gaps = 17/307 (5%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           +++SWG+G  G+LGHG E     P+L+ A  G N+  V+CG  HT  +  +G+++T+G G
Sbjct: 7   EVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRG 66

Query: 376 IHNLGLLGQVSEISHWI--PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
             N G LGQ + ++  +  P  VS  ++G  +  + CG  HT A+   G+L+T+G G +G
Sbjct: 67  --NFGQLGQGASVTANVSTPALVS-ALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYG 123

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
            LGHGD    + P+ VE+L+  +    + G +H++ I+E      G N      L TWG 
Sbjct: 124 RLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIE------GGN------LLTWGG 171

Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS 553
           G  GQLGHGD   R  P  VK        +VACG   T+ LT + +V++ GS ++G+LG 
Sbjct: 172 GYFGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGI 231

Query: 554 PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQT 613
                     +   ++   +  I+ G +H A ++S+  +YTWG G  GQLGHGD  ++  
Sbjct: 232 GDEEKHAEPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDENSQNI 291

Query: 614 PTLVEAL 620
           P +VE +
Sbjct: 292 PVVVEVI 298



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/301 (31%), Positives = 163/301 (54%), Gaps = 27/301 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V+ WG+G+    LG      ++   D +    P+++ + +  + + ++CG++H  ++ +
Sbjct: 7   EVYSWGQGV----LG------QLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILME 56

Query: 314 QGQIFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            G++F++G G+ G+LG G  V A+VS P L+ AL G ++  VACG  HTCA+  +G LYT
Sbjct: 57  NGEVFTFGRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALIDNGQLYT 116

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG G    G LG   E+    P+ V   ++G +++ +  G +H++ I   G L T+G G 
Sbjct: 117 WGSG--EYGRLGHGDEVRQASPKLVE-SLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGY 173

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           FG LGHGD +    P+ V+ +++      +CG  HT  + +            S++++TW
Sbjct: 174 FGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQ------------SQEVWTW 221

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           G G  G+LG GD E    P+ +     +    ++ G   + ALT+ G +++ G  D GQL
Sbjct: 222 GSGEFGKLGIGDEEKHAEPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQL 281

Query: 552 G 552
           G
Sbjct: 282 G 282



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 134/270 (49%), Gaps = 24/270 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+VF +G G    L  GA     +S+     AL  K          + +ACG  H   + 
Sbjct: 58  GEVFTFGRGNFGQLGQGASVTANVSTPALVSALQGK--------HVKQVACGWHHTCALI 109

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             GQ+++WG G  G+LGHG E   + PKL+++L G  +  VA G FH+  +   G+L TW
Sbjct: 110 DNGQLYTWGSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTW 169

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           G G    G LG   E     P+ V G  + +    + CG  HT  +T + +++T+G G F
Sbjct: 170 GGGY--FGQLGHGDETDRKTPKMVKGVQQCIA-HEVACGTHHTLMLTQSQEVWTWGSGEF 226

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           G LG GD    + P  +  L+ +  +  S G +H+AA+             S   L+TWG
Sbjct: 227 GKLGIGDEEKHAEPIMITALQGVGVIHISTGGFHSAALT------------SEGVLYTWG 274

Query: 493 DGAEGQLGHGDAEPRVVPLCVKV-SDDISF 521
            G +GQLGHGD   + +P+ V+V S D+S 
Sbjct: 275 GGDKGQLGHGDENSQNIPVVVEVISCDMSI 304



 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 134/273 (49%), Gaps = 17/273 (6%)

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           ++Y+WG G+  LG LG   E +   PR V   + G  +  + CG  HTA +   G++FTF
Sbjct: 7   EVYSWGQGV--LGQLGHGDEKTQRQPRLVVAFL-GFNVRQVSCGNQHTAILMENGEVFTF 63

Query: 428 GDGTFGALGHGD--RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
           G G FG LG G    ++ S P  V  L+       +CG  HT A+++        NG   
Sbjct: 64  GRGNFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCALID--------NG--- 112

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
            +L+TWG G  G+LGHGD   +  P  V+         VA G   +  +   G + + G 
Sbjct: 113 -QLYTWGSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGG 171

Query: 546 ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
             +GQLG    T +   ++   ++     ++ACG++H  +++   EV+TWG G  G+LG 
Sbjct: 172 GYFGQLGHGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGI 231

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           GD E    P ++ AL+   V  +  G   +AA+
Sbjct: 232 GDEEKHAEPIMITALQGVGVIHISTGGFHSAAL 264



 Score = 53.1 bits (126), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 32/49 (65%)

Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           SEVY+WG+G  GQLGHGD + ++ P LV A     V+ V CG+  TA +
Sbjct: 6   SEVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAIL 54


>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
          Length = 1016

 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 153 DVYLWGAG-RHGQLAEA----------GRNVMVPATAPS--FSQAQQVICGQNCTFVIQA 199

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
            G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 200 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 259

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 260 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 316

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 317 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 365

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 366 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 423

Query: 551 LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 424 IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 483

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            + + PTLV  L+ K ++ +  G   +AA
Sbjct: 484 NHVREPTLVTVLQGKNIRQISAGRCHSAA 512



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 156/329 (47%), Gaps = 28/329 (8%)

Query: 317 IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 154 VYLWGAGRHGQLAEAGRNVMVPATAPSF------SQAQQVICGQNCTFVIQANGTVLACG 207

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
           +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 208 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 264

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 265 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 312

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
           +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 313 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 372

Query: 550 QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 373 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 432

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           N   P  +  L    ++ V  G+  T A+
Sbjct: 433 NHNRPQQIPVLAGVVIEDVAVGAEHTLAL 461



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 138/276 (50%), Gaps = 24/276 (8%)

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           D+Y WG G H     GQ++E    +    +      Q   + CG   T  I + G +   
Sbjct: 153 DVYLWGAGRH-----GQLAEAGRNVMVPATAPSFS-QAQQVICGQNCTFVIQANGTVLAC 206

Query: 428 GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
           G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 207 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 254

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
           S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+ G
Sbjct: 255 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 314

Query: 545 SADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQ 602
           + DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  G+
Sbjct: 315 NGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGK 373

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 374 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 409



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289 VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
           VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 442 VLAGVVIED---VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 498

Query: 349 NIHMVACGEFHTCAVT 364
           NI  ++ G  H+ A T
Sbjct: 499 NIRQISAGRCHSAAWT 514


>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
          Length = 4837

 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 129/402 (32%), Positives = 203/402 (50%), Gaps = 37/402 (9%)

Query: 255  VFIWG----EGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            V +WG    E LG GL G  V              LP        L    IA GSK   +
Sbjct: 2894 VLVWGLNDKEQLG-GLKGSKVK-------------LPTYSSVLSQLKPIHIAGGSKSLFI 2939

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            V++ G++++ GEG+ G+LG G   +V  P+ +  LN   +  VA   G  H  A+TL G 
Sbjct: 2940 VSQDGKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGK 2999

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +++WG+G    G LG  + ++   P+ +   +   ++  I CG  H+AAITS+G+L+T+G
Sbjct: 3000 VFSWGEG--EDGKLGHGNRLTLEKPKLIES-LRTKRVRDIACGSSHSAAITSSGELYTWG 3056

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGHGD  +   P+ V TL+  + V  +CG            + + +  L+ + L
Sbjct: 3057 LGEYGRLGHGDNCTQLKPKLVTTLQGHRVVQVACG-----------SRDAQTLCLTEEGL 3105

Query: 489  -FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
             F+WGDG  G+LG G +E   VP  V+  + +   ++ CG   ++ALT +G+V++ G  D
Sbjct: 3106 VFSWGDGDFGKLGRGGSEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGD 3165

Query: 548  YGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            Y +LG       + PT I+G ++ + +  +A G+ H   V+   +VY WG   +GQ G G
Sbjct: 3166 YYRLGHGTDQHVRKPTPIQG-LRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSG 3224

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIAD 648
            +    + P LV  L    V  V CGS+ + A  L +  S  D
Sbjct: 3225 NTVVNKKPNLVLGLDGVFVNRVACGSSHSVAWSLPQNPSEKD 3266



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 127/398 (31%), Positives = 200/398 (50%), Gaps = 29/398 (7%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            + G   +F WG     G LGG ++G  I         +P   E+  +L    IA G +  
Sbjct: 3933 WGGASTIFGWGHN-HRGQLGG-LDGSRIK--------MPTPCEALSLLRPIQIAGGEQTL 3982

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT  G++++ G G+GG+LG G    VS P L+++L    I  VA   G  H  A++  
Sbjct: 3983 YAVTPDGKLYATGYGAGGRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSD 4042

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G++++WG+G    G LG  +  S+  P+ +   + G+ +  I CG  H+A ITS G + T
Sbjct: 4043 GEVFSWGEG--EDGKLGHGNRDSYDRPKLIEA-LSGIGVIDIACGSAHSACITSQGHVLT 4099

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+ VE L   + +  +CG          +G           
Sbjct: 4100 WGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACG----------SGDAQTLCITDDD 4149

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   +P+ ++    +   KV CG   ++ALT +G V++ G  
Sbjct: 4150 NVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKG 4209

Query: 547  DYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
            DY +LG  G+T   + P ++   ++ + I  IA GS H    S   EV+TWG    GQLG
Sbjct: 4210 DYHRLGH-GNTDHVRRPKKVAA-LQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLG 4267

Query: 605  HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHK 642
             G     Q P LV++L+ K +  V+CGS  T A+  ++
Sbjct: 4268 DGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLALSTYQ 4305



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/334 (33%), Positives = 169/334 (50%), Gaps = 29/334 (8%)

Query: 253  GDVFIWGEGLGNGLLG-GAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
            G ++  GEG  NG LG G  N V      R+  +L     +  V+   ++  G KHA+ +
Sbjct: 2944 GKLYACGEGT-NGRLGLGHNNNV---PTPRQVPIL-----NQYVVKKVAVHSGGKHAMAL 2994

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T  G++FSWGEG  GKLGHG    +  PKLI++L    +  +ACG  H+ A+T SG+LYT
Sbjct: 2995 TLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAITSSGELYT 3054

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGD 429
            WG G    G LG     +   P+ V+  ++G ++  + CG     T  +T  G +F++GD
Sbjct: 3055 WGLG--EYGRLGHGDNCTQLKPKLVT-TLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGD 3111

Query: 430  GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
            G FG LG G     SVP +VE L  +  +   CG   + A+ +            S +++
Sbjct: 3112 GDFGKLGRGGSEGCSVPHQVERLNSVGVMQIECGAQFSLALTK------------SGEVW 3159

Query: 490  TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
            TWG G   +LGHG  +    P  ++         VA G    +A+T +GQV++ G  D+G
Sbjct: 3160 TWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHG 3219

Query: 550  QLGSPGS-TGKFPTRIEGNIKHRYIEDIACGSYH 582
            Q GS  +   K P  + G +   ++  +ACGS H
Sbjct: 3220 QQGSGNTVVNKKPNLVLG-LDGVFVNRVACGSSH 3252



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 157/320 (49%), Gaps = 27/320 (8%)

Query: 218  DANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEIS 277
            D+ S  +  +S +  +   V+ +S G         G+VF WGEG  +G LG         
Sbjct: 4008 DSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEG-EDGKLGHGNR----D 4062

Query: 278  SADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS 337
            S DR     PK++E+   +    IACGS H+  +T QG + +WG+G  G+LGHG   D  
Sbjct: 4063 SYDR-----PKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQL 4117

Query: 338  YPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRK 395
             PKL++AL G     +AC  G+  T  +T   ++++WGDG  + G LG+       IP K
Sbjct: 4118 QPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDG--DYGKLGRGGSDGCKIPMK 4175

Query: 396  VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
            +   + GL +  + CG   + A+T +G ++T+G G +  LGHG+      P++V  L+  
Sbjct: 4176 IE-SLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGK 4234

Query: 456  KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
            K +  + G  H  A  +            S ++FTWGD  EGQLG G       P  V+ 
Sbjct: 4235 KIISIATGSLHCVACSD------------SGEVFTWGDNDEGQLGDGTVTAIQRPRLVQS 4282

Query: 516  SDDISFCKVACGHSITIALT 535
                   KV CG + T+AL+
Sbjct: 4283 LQGKHIVKVICGSAHTLALS 4302



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 151/292 (51%), Gaps = 24/292 (8%)

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIA--CGSKHAVLVTKQGQIFSWGEGSG 325
           GG V  +  +S++    + PK  E    +    IA  C  KH ++++   +++SWG G G
Sbjct: 541 GGQVFSLHSNSSEN---IAPKAFEGLEGVHVVQIAAHCEGKHVMVLSSANEVWSWGAGDG 597

Query: 326 GKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           G+LGHG      +P +I  L+   +  + CG  ++ A+T++G+L+TWG G +  G LG  
Sbjct: 598 GRLGHGDTVSKEHPTMIVGLHEKQVCGIYCGASYSAAITIAGELFTWGRGTY--GRLGHG 655

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           +     +P +V   ++  ++  +  G    H+  +T  G LF +GDG FG LG+G  + +
Sbjct: 656 NSDDKLVPTQVQA-LKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGS 714

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
            +P +++TL  +  +       ++ +   VA    G+       L+TWG G  G+LGHG+
Sbjct: 715 PIPVQIDTLVNVSRI-------YSGSQFSVALSCDGT-------LYTWGKGHGGRLGHGN 760

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG 555
           +E   VP  V+  +      VA G +  +ALT++G+++  G  DY Q+   G
Sbjct: 761 SEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQICPSG 812



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 164/345 (47%), Gaps = 35/345 (10%)

Query: 265 GLLGGAVNGVE--ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGE 322
           G +  A NG    + S  R  A     +E    L  + +AC   +  ++T  GQ+FS   
Sbjct: 493 GFMSEATNGTTQLMGSIPRYSA---ATIELPSTLQVRQVACTENNIYILTTGGQVFSLHS 549

Query: 323 GSGGKLGHGVEADVSYPKLIDALNGSNIHMVA--CGEFHTCAVTLSGDLYTWGDGIHNLG 380
            S   +          PK  + L G ++  +A  C   H   ++ + ++++WG G  + G
Sbjct: 550 NSSENIA---------PKAFEGLEGVHVVQIAAHCEGKHVMVLSSANEVWSWGAG--DGG 598

Query: 381 LLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR 440
            LG    +S   P  + G  E  Q+  I CG  ++AAIT AG+LFT+G GT+G LGHG+ 
Sbjct: 599 RLGHGDTVSKEHPTMIVGLHEK-QVCGIYCGASYSAAITIAGELFTWGRGTYGRLGHGNS 657

Query: 441 SSTSVPREVETLKELKTVMASCGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ 498
               VP +V+ LK  K V  + G    H+  + +        NGL    LF WGDG  G+
Sbjct: 658 DDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTD--------NGL----LFAWGDGDFGK 705

Query: 499 LGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG 558
           LG+G      +P  V++   ++  ++  G   ++AL+  G +++ G    G+LG   S  
Sbjct: 706 LGNGSCNGSPIP--VQIDTLVNVSRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGNSEH 763

Query: 559 KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
               ++   ++ + I D+A GS H   ++S  E+Y WG+    Q+
Sbjct: 764 SNVPKLVRALEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQI 808



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 143/296 (48%), Gaps = 36/296 (12%)

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
           +  VAC E +   +T  G +++    +H        S  S  I  K    +EG+ +  I 
Sbjct: 525 VRQVACTENNIYILTTGGQVFS----LH--------SNSSENIAPKAFEGLEGVHVVQIA 572

Query: 410 --CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
             C   H   ++SA +++++G G  G LGHGD  S   P  +  L E +     CG  ++
Sbjct: 573 AHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCGIYCGASYS 632

Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
           AAI  +AG+           LFTWG G  G+LGHG+++ ++VP  V+         VA G
Sbjct: 633 AAIT-IAGE-----------LFTWGRGTYGRLGHGNSDDKLVPTQVQALKSYKVVDVALG 680

Query: 528 ----HSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYH 582
               HS+ +  T  G +F+ G  D+G+LG+    G   P +I+  +    +  I  GS  
Sbjct: 681 SGDAHSMCV--TDNGLLFAWGDGDFGKLGNGSCNGSPIPVQIDTLVN---VSRIYSGSQF 735

Query: 583 IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
              +S    +YTWGKG  G+LGHG++E+   P LV AL  K++  V  GS    A+
Sbjct: 736 SVALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSAHCLAL 791



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 119/256 (46%), Gaps = 34/256 (13%)

Query: 392 IPRKVSGQME---GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPRE 448
           IPR  +  +E    LQ+  + C   +   +T+ G++F+          H + S    P+ 
Sbjct: 509 IPRYSAATIELPSTLQVRQVACTENNIYILTTGGQVFSL---------HSNSSENIAPKA 559

Query: 449 VETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL---SSKKLFTWGDGAEGQLGHGDAE 505
            E L+ +              +V++A    G + +   S+ ++++WG G  G+LGHGD  
Sbjct: 560 FEGLEGVH-------------VVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTV 606

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRI 564
            +  P  +    +   C + CG S + A+T  G++F+ G   YG+LG   S  K  PT++
Sbjct: 607 SKEHPTMIVGLHEKQVCGIYCGASYSAAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQV 666

Query: 565 EGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRD 622
           +  +K   + D+A GS   H   V+    ++ WG G  G+LG+G       P  ++ L +
Sbjct: 667 QA-LKSYKVVDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGSPIPVQIDTLVN 725

Query: 623 KQVKSVVCGSNFTAAI 638
             V  +  GS F+ A+
Sbjct: 726 --VSRIYSGSQFSVAL 739



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 20/125 (16%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           G +F WG+G    LGNG   G+   V+I +                +++   I  GS+ +
Sbjct: 693 GLLFAWGDGDFGKLGNGSCNGSPIPVQIDT----------------LVNVSRIYSGSQFS 736

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           V ++  G +++WG+G GG+LGHG     + PKL+ AL G  I  VA G  H  A+T SG+
Sbjct: 737 VALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRALEGKKIADVAVGSAHCLALTSSGE 796

Query: 369 LYTWG 373
           LY WG
Sbjct: 797 LYGWG 801



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 79/143 (55%), Gaps = 4/143 (2%)

Query: 501 HGDAEPRVVPLCVKVSDDISFCKVA--CGHSITIALTATGQVFSMGSADYGQLGSPGSTG 558
           H ++   + P   +  + +   ++A  C     + L++  +V+S G+ D G+LG   +  
Sbjct: 548 HSNSSENIAPKAFEGLEGVHVVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVS 607

Query: 559 K-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLV 617
           K  PT I G +  + +  I CG+ + A ++   E++TWG+G  G+LGHG++++K  PT V
Sbjct: 608 KEHPTMIVG-LHEKQVCGIYCGASYSAAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQV 666

Query: 618 EALRDKQVKSVVCGSNFTAAICL 640
           +AL+  +V  V  GS    ++C+
Sbjct: 667 QALKSYKVVDVALGSGDAHSMCV 689


>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 2154

 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 138/452 (30%), Positives = 223/452 (49%), Gaps = 42/452 (9%)

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSF---RISLSSAVSSSSQGS 244
            +LSF++A K+   AE++S    F  S  + + ++RS  A S+   R  L+  V   +   
Sbjct: 1733 LLSFSSAVKS---AEALSNRTAFPESFRMLNKDTRSCQAQSWDNTRWDLNMDVQIMNWAM 1789

Query: 245  CH-EDF--DGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
               ED+   G  + F+WG G    +  G            R A +P  + S     +Q I
Sbjct: 1790 QKPEDWLIGGKCEAFLWGSGRNGQMCEGG-----------RGAFVPVRVPSFSC--SQQI 1836

Query: 302  ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EF 358
             CG     +V   G + + GEGS G+LG G   D+     I ++ G  +  +A     + 
Sbjct: 1837 VCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSDG 1896

Query: 359  HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
            HT AVT SG++++WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +
Sbjct: 1897 HTLAVTESGEVFSWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVIQLSCGFKHSAVV 1953

Query: 419  TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
            T+ GKLFTFG+G +G LG G  ++  VP  V  L+  +    +CG+ HT  +        
Sbjct: 1954 TADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYVACGLNHTLCV-----SAD 2008

Query: 479  GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
            G+N      ++ +GDG  G+LG G+   + +P  +K        KVACG   ++AL+  G
Sbjct: 2009 GTN------VWAFGDGDFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQFSVALSKYG 2062

Query: 539  QVFSMGSADY-GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
            +VF+ G     GQ  + G +   P  +  ++   +IED+ CG+ H  V++S  +V+ WG 
Sbjct: 2063 KVFTWGQERLIGQPDTRGGSNCQPQEV-ASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGS 2121

Query: 598  GANGQLGHGD-NENKQTPTLVEALRDKQVKSV 628
             + GQLG G  N   + P LV  L  K ++ V
Sbjct: 2122 NSEGQLGLGHTNSPVREPQLVPCLTGKNIRQV 2153



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 126/238 (52%), Gaps = 22/238 (9%)

Query: 408  ICCGPWHTAAITSAGKLFTFGDGTFGALGHG---DRSSTSVPREVE--TLKELKTVMASC 462
            I CG   T  + + G +   G+G++G LG G   D  S +    ++   + +L T + S 
Sbjct: 1836 IVCGQNCTFVVQNNGTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSD 1895

Query: 463  GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
            G  HT A+ E            S ++F+WGDG  G+LGHG+++ +  P  ++        
Sbjct: 1896 G--HTLAVTE------------SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVI 1941

Query: 523  KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSY 581
            +++CG   +  +TA G++F+ G+ DYG+LG   +T  K PTR+     H+ I  +ACG  
Sbjct: 1942 QLSCGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQ-IGYVACGLN 2000

Query: 582  HIAVVSSK-SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            H   VS+  + V+ +G G  G+LG G+   K  PT ++AL+   +K V CG+ F+ A+
Sbjct: 2001 HTLCVSADGTNVWAFGDGDFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQFSVAL 2058


>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
          Length = 4817

 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 197/388 (50%), Gaps = 26/388 (6%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G   G +I +        P + E+   L    I  GSK    VT+ 
Sbjct: 2916 VFVWGLNDKDQL--GGPKGSKIKT--------PGINETLSTLKCVQIVGGSKSLFCVTQD 2965

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++F+ GE + G+LG G+ A +V  P+ + +L+   I  VA   G  H  A+T+ G +++
Sbjct: 2966 GKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVDGKVFS 3025

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   +   ++  I CG  H+AAI S G L+T+G G 
Sbjct: 3026 WGEG--DDGKLGHFSRMNCDKPRLIEA-LRSKRVRDIACGGSHSAAIISNGDLYTWGLGE 3082

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            +G LGHGD ++   P+ V+ L+  + +  + G      +   A   SG+       +++W
Sbjct: 3083 YGRLGHGDNTTQLRPKLVKALEGQRVIQVALGSRDAQTL---ALTDSGT-------VYSW 3132

Query: 492  GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
            GDG  G+LG G +E   VP  ++  + +  C++ CG   ++ALT +GQV++ G  DY +L
Sbjct: 3133 GDGDFGKLGRGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSGQVWTWGKGDYFRL 3192

Query: 552  GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            G          ++   +K + +  +A G+ H   V    +VY WG   +GQ G+      
Sbjct: 3193 GHGTDAHVRKPQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQQGNSTTTVN 3252

Query: 612  QTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            + P LV+ L   ++  V CGS+ + A C
Sbjct: 3253 RKPALVQGLEGCKISRVACGSSHSIAWC 3280



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 192/399 (48%), Gaps = 25/399 (6%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            + G G ++ WG     G LGG V G ++         LP   E+   +    +  G +  
Sbjct: 3932 WGGSGQIWGWGHN-HRGQLGG-VEGAKVK--------LPVSCETLATMRPVQLIGGEQTL 3981

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              +T  G++ + G G+GG+LG G    V+ P LI+++    I  VA   G  H  A++  
Sbjct: 3982 FSITGDGKVCATGYGAGGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSAE 4041

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G++Y+WG+G    G LG  +      PR +   + G ++  I  G  H+A ITS G+L++
Sbjct: 4042 GEVYSWGEG--EDGKLGHGNRSPCDRPRAIES-LRGKEVVDIAAGGAHSACITSTGELYS 4098

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD    + P+ V+ LK  +    +CG          +G           
Sbjct: 4099 WGKGRYGRLGHGDSEDQTKPKLVDALKGYRVTDVACG----------SGDAQTLCITDDD 4148

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  
Sbjct: 4149 SVWSWGDGDYGKLGRGGSDGCKVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKG 4208

Query: 547  DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            DY +LG          R    ++ + I  IACGS H    +   EVYTWG    GQLG G
Sbjct: 4209 DYHRLGHGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLGDG 4268

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVS 645
                 Q P LV AL+ K++  V CGS  + A   +K V+
Sbjct: 4269 TTNAIQRPRLVAALQGKKINRVACGSAHSLAWSTNKPVN 4307



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 148/314 (47%), Gaps = 42/314 (13%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G+V+ WGEG  +G LG        S  DR     P+ +ES    +   IA G  H+  +T
Sbjct: 4042 GEVYSWGEG-EDGKLGHGNR----SPCDR-----PRAIESLRGKEVVDIAAGGAHSACIT 4091

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLY 370
              G+++SWG+G  G+LGHG   D + PKL+DAL G  +  VAC  G+  T  +T    ++
Sbjct: 4092 STGELYSWGKGRYGRLGHGDSEDQTKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVW 4151

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+       +P K+   ++GL +  + CG   + A+T +G ++T+G G
Sbjct: 4152 SWGDG--DYGKLGRGGSDGCKVPMKIDA-LQGLGVIKVECGSQFSVALTKSGAVYTWGKG 4208

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +  LGHG       PR   TL+  K V  +CG  H  A  +              +++T
Sbjct: 4209 DYHRLGHGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTDAG------------EVYT 4256

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGD  EGQLG G       P  V         +VACG + ++A +               
Sbjct: 4257 WGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHSLAWSTN------------- 4303

Query: 551  LGSPGSTGKFPTRI 564
               P + GK P +I
Sbjct: 4304 --KPVNAGKLPAQI 4315



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 145/300 (48%), Gaps = 28/300 (9%)

Query: 307 HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
           H + +T +G ++SWG G  GKLGHG       P LI+ L+G ++  VACG  H+ A+T S
Sbjct: 489 HCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAITAS 548

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKL 424
           G+L+TWG G  + G LG  S      P  VSG + G+ +  + CG     T A+   G +
Sbjct: 549 GELFTWGRG--SFGRLGLGSTEDILTPALVSGLL-GVTVVDVACGSGDAQTIALADTGSV 605

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           +++GDG +G LG G       P+ V+ L+ L      CG  ++AA+ +        NG  
Sbjct: 606 YSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCK--------NG-- 655

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
              +FTWG+G   +LGHG  E    P  V+         ++ G    +A T  G++ S G
Sbjct: 656 --AVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTEEGELLSWG 713

Query: 545 SADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
             D GQLG  G TG K       ++  + I  I C         S ++ + W + + G +
Sbjct: 714 RNDKGQLGE-GHTGLKAEPAFAASLLGKCIIGITC---------SSAQTFAWSRPSRGTM 763



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 164/344 (47%), Gaps = 27/344 (7%)

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE--ADVSYPKLIDALNGSNIHMVA 354
           D   +AC S   +++ + G+++     +  +  H +   AD+   KL     GS      
Sbjct: 435 DIIQVACSSNSLLILLRTGRVYKMTNSAEPQSMHEISTLADIEIIKLAAHSEGS------ 488

Query: 355 CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
               H  A+T  GD+Y+WG+G  + G LG    ++   P  ++ ++ G  + ++ CG  H
Sbjct: 489 ----HCLALTSEGDVYSWGNG--DFGKLGHGDTVTCDSPMLIN-ELHGKSVVNVACGSHH 541

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           +AAIT++G+LFT+G G+FG LG G       P  V  L  +  V  +CG   +     +A
Sbjct: 542 SAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACG---SGDAQTIA 598

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
              +GS       +++WGDG  G+LG G +E    P  V     +   +V CG   + A+
Sbjct: 599 LADTGS-------VYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAV 651

Query: 535 TATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
              G VF+ G+ +  +LG       +FP ++E  +  +++  ++ GS+H    + + E+ 
Sbjct: 652 CKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVE-TLAGKHVTSLSLGSHHCLATTEEGELL 710

Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           +WG+   GQLG G    K  P    +L  K +  + C S  T A
Sbjct: 711 SWGRNDKGQLGEGHTGLKAEPAFAASLLGKCIIGITCSSAQTFA 754



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 149/330 (45%), Gaps = 41/330 (12%)

Query: 316 QIFSWGEGSGGKLG-HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           ++F+WG  S      H     +  P  +D     +I  VAC       +  +G +Y   +
Sbjct: 406 ELFAWGWLSTSDATCHNTPTTIPLPNDLD-----DIIQVACSSNSLLILLRTGRVYKMTN 460

Query: 375 G-----IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
                 +H +  L  +  I      K++   EG           H  A+TS G ++++G+
Sbjct: 461 SAEPQSMHEISTLADIEII------KLAAHSEGS----------HCLALTSEGDVYSWGN 504

Query: 430 GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
           G FG LGHGD  +   P  +  L     V  +CG  H+AAI             +S +LF
Sbjct: 505 GDFGKLGHGDTVTCDSPMLINELHGKSVVNVACGSHHSAAIT------------ASGELF 552

Query: 490 TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSAD 547
           TWG G+ G+LG G  E  + P  V     ++   VACG   + TIAL  TG V+S G  +
Sbjct: 553 TWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGE 612

Query: 548 YGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
           YG+LG  GS G    ++   ++   +  + CG  + A V     V+TWG G   +LGHG 
Sbjct: 613 YGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGT 672

Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            E+ + P  VE L  K V S+  GS+   A
Sbjct: 673 EEHVRFPRQVETLAGKHVTSLSLGSHHCLA 702



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 137/276 (49%), Gaps = 31/276 (11%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S+GS        GDV+ WG    NG  G   +G  ++       L+ ++   +VV 
Sbjct: 481 LAAHSEGSHCLALTSEGDVYSWG----NGDFGKLGHGDTVTCDS--PMLINELHGKSVV- 533

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
              ++ACGS H+  +T  G++F+WG GS G+LG G   D+  P L+  L G  +  VAC 
Sbjct: 534 ---NVACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACG 590

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T A+  +G +Y+WGDG    G LG+        P+ V  +++GL ++ + CGP +
Sbjct: 591 SGDAQTIALADTGSVYSWGDG--EYGKLGRGGSEGCKAPKLVD-KLQGLDVTRVYCGPQY 647

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           +AA+   G +FT+G+G    LGHG       PR+VETL        S G  H  A  E  
Sbjct: 648 SAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTE-- 705

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHG----DAEP 506
                       +L +WG   +GQLG G     AEP
Sbjct: 706 ----------EGELLSWGRNDKGQLGEGHTGLKAEP 731



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 99/178 (55%), Gaps = 11/178 (6%)

Query: 470 IVEVAGKTSGSNGL---SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           I+++A  + GS+ L   S   +++WG+G  G+LGHGD      P+ +      S   VAC
Sbjct: 478 IIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGKSVVNVAC 537

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGS---Y 581
           G   + A+TA+G++F+ G   +G+LG  GST     P  + G +    + D+ACGS    
Sbjct: 538 GSHHSAAITASGELFTWGRGSFGRLGL-GSTEDILTPALVSGLLGVTVV-DVACGSGDAQ 595

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            IA+  + S VY+WG G  G+LG G +E  + P LV+ L+   V  V CG  ++AA+C
Sbjct: 596 TIALADTGS-VYSWGDGEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVC 652



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 21/201 (10%)

Query: 229  FRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK 288
            +R++  +  S  +Q  C  D D    V+ WG+G    L  G  +G ++          P 
Sbjct: 4127 YRVTDVACGSGDAQTLCITDDDS---VWSWGDGDYGKLGRGGSDGCKV----------PM 4173

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
             +++   L    + CGS+ +V +TK G +++WG+G   +LGHG E  +  P+    L G 
Sbjct: 4174 KIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTEDHIRRPRRCTTLQGK 4233

Query: 349  NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSI 408
             I  +ACG  H  A T +G++YTWGD  ++ G LG  +  +   PR V+  ++G +I+ +
Sbjct: 4234 KIVSIACGSLHCVACTDAGEVYTWGD--NDEGQLGDGTTNAIQRPRLVAA-LQGKKINRV 4290

Query: 409  CCG-----PWHTAAITSAGKL 424
             CG      W T    +AGKL
Sbjct: 4291 ACGSAHSLAWSTNKPVNAGKL 4311



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 95/221 (42%), Gaps = 15/221 (6%)

Query: 423  KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            ++F +G      LG    S    P   ETL  LK V              V G  S    
Sbjct: 2915 QVFVWGLNDKDQLGGPKGSKIKTPGINETLSTLKCVQI------------VGGSKSLFCV 2962

Query: 483  LSSKKLFTWGDGAEGQLGHGDAE---PRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                KLF  G+   G+LG G +    P+   L       I    V  G    +ALT  G+
Sbjct: 2963 TQDGKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVDGK 3022

Query: 540  VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
            VFS G  D G+LG          R+   ++ + + DIACG  H A + S  ++YTWG G 
Sbjct: 3023 VFSWGEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAIISNGDLYTWGLGE 3082

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
             G+LGHGDN  +  P LV+AL  ++V  V  GS     + L
Sbjct: 3083 YGRLGHGDNTTQLRPKLVKALEGQRVIQVALGSRDAQTLAL 3123



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 2/125 (1%)

Query: 518 DISFCKVACGH--SITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIED 575
           DI   K+A     S  +ALT+ G V+S G+ D+G+LG   +       +   +  + + +
Sbjct: 475 DIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGKSVVN 534

Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           +ACGS+H A +++  E++TWG+G+ G+LG G  E+  TP LV  L    V  V CGS   
Sbjct: 535 VACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSGDA 594

Query: 636 AAICL 640
             I L
Sbjct: 595 QTIAL 599


>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
 gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
          Length = 1345

 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 202/401 (50%), Gaps = 42/401 (10%)

Query: 247 EDFD--GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACG 304
           ED++  G  D ++WG G  +G L  +  GV +          P V +S  +  AQ + CG
Sbjct: 480 EDWETGGKCDAYLWGGGR-HGQLAESGRGVNV----------PTVTKS--LASAQQVVCG 526

Query: 305 SKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTC 361
                +V   G I + GEGS G+LG G   D+     I AL G  +  +A     + H+ 
Sbjct: 527 QNCTFVVQVNGTILACGEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDGHSL 586

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           A+T SG++++WGDG  + G LG  +      PR++   + G ++ ++ CG  H+A +T  
Sbjct: 587 ALTDSGEVFSWGDG--DYGKLGHGNSDRQRRPRQIEA-LRGEEVVNMACGFKHSAVVTVD 643

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           GKLFTFG+G +G LGHG+ ++   P  V  L++      +CG+ HT  ++   G T    
Sbjct: 644 GKLFTFGNGDYGRLGHGNSANKKTPERVTALEKHAIGQVACGLNHTL-VLSADGNT---- 698

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
                 ++ +GDG  G+LG G    +  P  + V   I   K+ CG   ++ LT  G+VF
Sbjct: 699 ------VWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQFSVVLTNDGRVF 752

Query: 542 SMGSADY-----GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           S G         G+L  P    + P +I+    H +I+D+  G+ H+  ++S  EV+ WG
Sbjct: 753 SFGQERLTGQPEGRLRGP----QKPQQIQALASH-FIDDVCVGAEHVLALTSTGEVWGWG 807

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
              +GQLG G +  ++ P ++  L+ K ++ +  G N +AA
Sbjct: 808 NNVDGQLGLGHSNAQREPCVIPDLKGKNIRQISAGRNHSAA 848



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 159/338 (47%), Gaps = 28/338 (8%)

Query: 290 LESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN 349
           L+  VV+   +      H++ +T  G++FSWG+G  GKLGHG       P+ I+AL G  
Sbjct: 567 LQGYVVIQIATSRGSDGHSLALTDSGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGEE 626

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
           +  +ACG  H+  VT+ G L+T+G+G  + G LG  +  +   P +V+  +E   I  + 
Sbjct: 627 VVNMACGFKHSAVVTVDGKLFTFGNG--DYGRLGHGNSANKKTPERVTA-LEKHAIGQVA 683

Query: 410 CGPWHTAAITSAGK-LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTA 468
           CG  HT  +++ G  ++ FGDG +G LG G  ++ + P+ ++ L  +      CG   + 
Sbjct: 684 CGLNHTLVLSADGNTVWAFGDGDYGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQFSV 743

Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGD-----GAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
            +             +  ++F++G        EG+L       ++  L     DD     
Sbjct: 744 VLT------------NDGRVFSFGQERLTGQPEGRLRGPQKPQQIQALASHFIDD----- 786

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHI 583
           V  G    +ALT+TG+V+  G+   GQLG   S  +    +  ++K + I  I+ G  H 
Sbjct: 787 VCVGAEHVLALTSTGEVWGWGNNVDGQLGLGHSNAQREPCVIPDLKGKNIRQISAGRNHS 846

Query: 584 AVVSSKSEVYTWGKGANG--QLGHGDNENKQTPTLVEA 619
           A  ++      +  GA    QLGH ++   Q P L E 
Sbjct: 847 AAWTAPPPPPRFPPGAPMPLQLGHPEHTPPQFPALAEV 884



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 134/279 (48%), Gaps = 30/279 (10%)

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWI-PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
           D Y WG G H     GQ++E    +    V+  +   Q   + CG   T  +   G +  
Sbjct: 489 DAYLWGGGRH-----GQLAESGRGVNVPTVTKSLASAQ--QVVCGQNCTFVVQVNGTILA 541

Query: 427 FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS-- 484
            G+G++G LG G+          + L  L  + A  G      ++++A  + GS+G S  
Sbjct: 542 CGEGSYGRLGMGNS---------DDLFTLSPISALQGY----VVIQIA-TSRGSDGHSLA 587

Query: 485 ---SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
              S ++F+WGDG  G+LGHG+++ +  P  ++         +ACG   +  +T  G++F
Sbjct: 588 LTDSGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGEEVVNMACGFKHSAVVTVDGKLF 647

Query: 542 SMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSK-SEVYTWGKGA 599
           + G+ DYG+LG   S  K  P R+    KH  I  +ACG  H  V+S+  + V+ +G G 
Sbjct: 648 TFGNGDYGRLGHGNSANKKTPERVTALEKHA-IGQVACGLNHTLVLSADGNTVWAFGDGD 706

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G    K +P  ++ L     K + CG+ F+  +
Sbjct: 707 YGKLGLGSCTAKTSPQAIDVLAGIGCKKICCGTQFSVVL 745



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 116/232 (50%), Gaps = 27/232 (11%)

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           W T     A   + +G G  G L    R   +VP   ++L   + V+  CG  +   +V+
Sbjct: 482 WETGGKCDA---YLWGGGRHGQLAESGRG-VNVPTVTKSLASAQQVV--CGQ-NCTFVVQ 534

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR-----VVPLCVKVSDDISFCKVACG 527
           V G            +   G+G+ G+LG G+++       +  L   V   I+  + + G
Sbjct: 535 VNGT-----------ILACGEGSYGRLGMGNSDDLFTLSPISALQGYVVIQIATSRGSDG 583

Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGST-GKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
           HS+  ALT +G+VFS G  DYG+LG   S   + P +IE  ++   + ++ACG  H AVV
Sbjct: 584 HSL--ALTDSGEVFSWGDGDYGKLGHGNSDRQRRPRQIEA-LRGEEVVNMACGFKHSAVV 640

Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +   +++T+G G  G+LGHG++ NK+TP  V AL    +  V CG N T  +
Sbjct: 641 TVDGKLFTFGNGDYGRLGHGNSANKKTPERVTALEKHAIGQVACGLNHTLVL 692


>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
          Length = 4856

 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 128/398 (32%), Positives = 202/398 (50%), Gaps = 43/398 (10%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3984 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4030

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4031 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4090

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4091 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4147

Query: 431  TFGALGHGDRSSTSVPREVETLKEL-------KTVMAS--CGVWHTAAIVEVAGKTSGSN 481
             +G LG G+ S+  +P  V  L+         K+++ S  CG+ HT A+        GS 
Sbjct: 4148 DYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAV-----SADGS- 4201

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
                  ++ +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  GQV+
Sbjct: 4202 -----MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGQVY 4256

Query: 542  SMGSADYGQLGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
            + G      +G P    +   R +    +    IED+A G+ H   ++S  ++Y WG  +
Sbjct: 4257 TFGQDRL--IGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALTSTGDIYAWGSNS 4314

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             GQLG G   + + PTLV  L+ K V+ +  G   +AA
Sbjct: 4315 EGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAA 4352



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G           +   L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGT----------QEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   +++LT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ V  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQVSAGTSHSLA 732



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 166/335 (49%), Gaps = 23/335 (6%)

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
           A +V++  +++ WG  S  +L  G +  +  PKL  A + S+   +  G++ T  ++  G
Sbjct: 365 APIVSETCEVYVWGSNSSHQLVEGTQEKILQPKL--APSFSDAQTIEAGQYCTFVISTDG 422

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            +   G G +    LG  +  S              ++SS      HT A T+ G++F++
Sbjct: 423 SVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSW 482

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTAAIVEVAGKTSGSNGLSSK 486
           GDG +G LGHG+ S+   P+ ++   + K V+  S G  H+AA+ E              
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE------------DG 530

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS-FCKVACGHSITIALTATGQ-VFSMG 544
           +L+TWG+G  G+LGHGD+  R +P  VK   DIS   +V+CG S TIAL+  G+ V+S G
Sbjct: 531 ELYTWGEGDFGRLGHGDSNSRNIPTLVK---DISNVGEVSCGSSHTIALSKDGRTVWSFG 587

Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
             D G+LG   +   +  ++   ++  +I  +  GS     ++S  +VY WG GA   LG
Sbjct: 588 GGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCGAC--LG 645

Query: 605 HGDNE-NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G +E     P L+E L   ++  +  G +   A+
Sbjct: 646 CGSSEATALRPKLIEELAATRIVDISIGDSHCLAL 680



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 157/338 (46%), Gaps = 37/338 (10%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3985 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4038

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4039 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4095

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4096 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4143

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISF---------CKVACGHSITIALTATG-QV 540
            +G+G  G+LG G+   + +P  V   +             C VACG + T+A++A G  V
Sbjct: 4144 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMV 4203

Query: 541  FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
            ++ G  DYG+LG   ST K   +    +    I+ +ACG+     ++   +VYT+G+   
Sbjct: 4204 WAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGQVYTFGQDRL 4263

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
              L  G   N   P  V  L    ++ V  G+  T A+
Sbjct: 4264 IGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLAL 4301



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 140/284 (49%), Gaps = 31/284 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG G H     GQ++E    +    +      Q   + CG   T  I + G +   
Sbjct: 3984 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFS-QAQQVICGQNCTFVIQANGTVLAC 4037

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E            
Sbjct: 4038 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE------------ 4085

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+ G
Sbjct: 4086 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4145

Query: 545  SADYGQLG-SPGSTGKFPTRIE-------GNIKHR-YIEDIACGSYH-IAVVSSKSEVYT 594
            + DYG+LG    S  K P R+        G  +++  I  +ACG  H +AV +  S V+ 
Sbjct: 4146 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAVSADGSMVWA 4205

Query: 595  WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            +G G  G+LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4206 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4249



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + ++TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLSLTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDISIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +V+ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQVSAGTSHSLAWTA 735



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +T  G I++WG  S G+LG G    V  P L+  L G 
Sbjct: 4282 VLAGVVIED---VAVGAEHTLALTSTGDIYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 4338

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 4339 NVRQISAGRCHSAAWT 4354


>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
 gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
          Length = 4996

 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 191/391 (48%), Gaps = 37/391 (9%)

Query: 255  VFIWG----EGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            V +WG    E LG GL G  V              +P   ++   L    I+ GSK   +
Sbjct: 3029 VMVWGLNDKEQLG-GLKGSKVK-------------VPTFSQTISRLRPIHISGGSKSLFI 3074

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            V++ G++F+ GEG+ G+LG GV  +V  P  +  L+   +  VA   G  H  A+TL G 
Sbjct: 3075 VSQDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGK 3134

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +++WG+G    G LG  +  +   PR V   +   +I  + CG  H+AAI+S G+L+T+G
Sbjct: 3135 VFSWGEG--EDGKLGHGNRTTLDKPRLVEA-LRAKKIRDVACGSSHSAAISSQGELYTWG 3191

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV--WHTAAIVEVAGKTSGSNGLSSK 486
             G +G LGHGD ++   P++V  L   + +  +CG     T A+ E              
Sbjct: 3192 LGEYGRLGHGDNATQLKPKQVTALAGRRVIQVACGSRDAQTLALTE------------DG 3239

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +F+WGDG  G+LG G +E    P  ++    I   ++ CG   ++ALT  G+V++ G  
Sbjct: 3240 AVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKG 3299

Query: 547  DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            DY +LG  G       +  G ++ R +  +A G+ H   V+   +VY WG   +GQ G G
Sbjct: 3300 DYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 3359

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            +    + P LV  L    V  V CGS+ + A
Sbjct: 3360 NTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3390



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/394 (32%), Positives = 194/394 (49%), Gaps = 29/394 (7%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            + G   ++ WG     G LGG + G  I +        P   E+  +L    +A G +  
Sbjct: 4142 WGGASTIYGWGHN-HRGQLGG-LEGSRIKT--------PTPCEALSLLRPVQLAGGEQSL 4191

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT  G++F+ G GSGG+LG G     + P L+ +L    +  VA   G  H  A+T  
Sbjct: 4192 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 4251

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G++Y WG+G    G LG  + +S+  P+ V   + G+ ++ I CG  H+AAITS+G + T
Sbjct: 4252 GEVYAWGEG--EDGKLGHGNRMSYDRPKLVE-HLNGMSVADIACGSAHSAAITSSGHVLT 4308

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+ VE L   + +  +CG          +G           
Sbjct: 4309 WGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG----------SGDAQTLCITDDD 4358

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   +P  ++    +   KV CG   ++ALT +G V++ G  
Sbjct: 4359 NVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4418

Query: 547  DYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
            D+ +LG  GS    + P ++   ++ + I  IA GS H    S   EVYTWG    GQLG
Sbjct: 4419 DFHRLGH-GSVDHVRRPKKVAA-LQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLG 4476

Query: 605  HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G     Q P LV AL+ K +  V CGS  T A+
Sbjct: 4477 DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4510



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 148/307 (48%), Gaps = 19/307 (6%)

Query: 286  LPKVLEST--VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLID 343
            +P +L S   V +   ++  G KH + +T +G++++WGEG  GKLGHG       PKL++
Sbjct: 4221 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 4280

Query: 344  ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
             LNG ++  +ACG  H+ A+T SG + TWG G +  G LG         P+ V   + G 
Sbjct: 4281 HLNGMSVADIACGSAHSAAITSSGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEALL-GY 4337

Query: 404  QISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
            +   I CG     T  IT    ++++GDG +G LG G      +P ++E+L  L  +   
Sbjct: 4338 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 4397

Query: 462  CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
            CG   + A+ +            S  ++TWG G   +LGHG  +    P  V        
Sbjct: 4398 CGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4445

Query: 522  CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
              +A G    +A +  G+V++ G  D GQLG    T     R+   ++ ++I  + CGS 
Sbjct: 4446 ISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4505

Query: 582  HIAVVSS 588
            H   +S+
Sbjct: 4506 HTLALST 4512



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 143/287 (49%), Gaps = 27/287 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G+V+ WGEG  +G LG   +G  +S  DR     PK++E    +    IACGS H+  +T
Sbjct: 4252 GEVYAWGEG-EDGKLG---HGNRMSY-DR-----PKLVEHLNGMSVADIACGSAHSAAIT 4301

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
              G + +WG+G  G+LGHG   D   PKL++AL G     +ACG  +  T  +T   +++
Sbjct: 4302 SSGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4361

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+       +P K+   + GL +  + CG   + A+T +G ++T+G G
Sbjct: 4362 SWGDG--DYGKLGRGGSDGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4418

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             F  LGHG       P++V  L+  K +  + G  H  A  +              +++T
Sbjct: 4419 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAG------------EVYT 4466

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
            WGD  EGQLG G       P  V         KV CG + T+AL+ +
Sbjct: 4467 WGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4513



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 82/156 (52%), Gaps = 2/156 (1%)

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATGQVFSMG 544
            K+F  G+G  G+LG G      +P  + V       KVA   G    +ALT  G+VFS G
Sbjct: 3080 KVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWG 3139

Query: 545  SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
              + G+LG    T     R+   ++ + I D+ACGS H A +SS+ E+YTWG G  G+LG
Sbjct: 3140 EGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLG 3199

Query: 605  HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            HGDN  +  P  V AL  ++V  V CGS     + L
Sbjct: 3200 HGDNATQLKPKQVTALAGRRVIQVACGSRDAQTLAL 3235



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 28/273 (10%)

Query: 339 PKLIDALNGSNIHMVA--CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV 396
           P+ I+ L    I  +A  C   H  A+  + + Y+WG G  +   LG     +  +P K+
Sbjct: 604 PQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHR--LGHGDTHARAVPTKI 661

Query: 397 SGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK 456
           S       + ++ CG  ++AAIT +G L+T+G GT+G LGHG+     VP  V  L E +
Sbjct: 662 SALDRC--VKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYE 719

Query: 457 TVMASCGVWHTAAIVEVAGKTSGSNGL---SSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
                        I++VA  +  ++ L   S   ++ WGDG  G+LG+G+    + P+ V
Sbjct: 720 -------------IIDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPILV 766

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSAD---YGQLGSPGSTGKFPTRIEGNIKH 570
           +    +   ++  G   ++ALT  G ++S G A    + Q+         P R+  +++H
Sbjct: 767 ETLPRVQ--RIFAGAQSSMALTTEGHLYSWGKASCLGHQQVERSVQGCSVP-RLVSSLQH 823

Query: 571 RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           + + D+A G  H   ++S  EV+ WG+  + Q+
Sbjct: 824 KRLVDVAVGVAHCLALTSCGEVFGWGRNDSQQI 856



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 103/222 (46%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            A  ++ +G    G LG  + S    P   E L  L+ V  + G     A+          
Sbjct: 4145 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT--------- 4195

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
                  KLF  G G+ G+LG G ++   +P  +     +   KVA   G    +ALT  G
Sbjct: 4196 ---PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4252

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V++ G  + G+LG          ++  ++    + DIACGS H A ++S   V TWGKG
Sbjct: 4253 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKG 4312

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++  P LVEAL   +   + CGS     +C+
Sbjct: 4313 RYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCI 4354



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 10/175 (5%)

Query: 470 IVEVAGKTSGSNGL---SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD-DISFCKVA 525
           I+ +AG   G + L   S++  ++WG G + +LGHGD   R VP   K+S  D     V 
Sbjct: 615 ILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVP--TKISALDRCVKAVF 672

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS--YHI 583
           CG S + A+T +G +++ G   YG+LG   S  +    I   +    I D+A GS   H 
Sbjct: 673 CGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVALGSGDAHS 732

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             ++S+  VY WG G  G+LG+G+  +   P LVE L   +V+ +  G+  + A+
Sbjct: 733 LCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPILVETL--PRVQRIFAGAQSSMAL 785



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 5/144 (3%)

Query: 498 QLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGST 557
           +LG  + EP+  P+     + I      C     +A+ +    +S G+ +  +LG   + 
Sbjct: 596 RLGKPELEPQ--PIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTH 653

Query: 558 GK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTL 616
            +  PT+I      R ++ + CG  + A ++    +YTWG+G  G+LGHG+++++  P +
Sbjct: 654 ARAVPTKISA--LDRCVKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAI 711

Query: 617 VEALRDKQVKSVVCGSNFTAAICL 640
           V AL + ++  V  GS    ++CL
Sbjct: 712 VMALAEYEIIDVALGSGDAHSLCL 735


>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
 gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
          Length = 3971

 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 141/457 (30%), Positives = 227/457 (49%), Gaps = 46/457 (10%)

Query: 190  SFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTAD-------SFRISLSSAVSS-SS 241
            SF++A K+   AE++SK   F +S  + D  + S           ++++++   + + ++
Sbjct: 3115 SFSSALKS---AETLSKRCAFPSSFVVPDIETISKDEPMQPTDNIAWKLNMDEEIMAWAT 3171

Query: 242  QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
            Q        G  + ++WG G    L   A  G        R  L P V  S     AQ I
Sbjct: 3172 QKPEDWMLGGRCEAYMWGGGRHGQL---AETG--------RSLLTPTVTPS--FSQAQQI 3218

Query: 302  ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EF 358
             CG     ++   G + + GEGS G+LG G   D+    +I AL G  +   + +CG + 
Sbjct: 3219 ICGQNCTFVIQANGTVQACGEGSYGRLGQGNSDDLHQLTIISALQGFVVTQLVTSCGSDG 3278

Query: 359  HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
            H+ A+T SG++++WGDG  + G LG  +      PR++   ++G +I  + CG  H+A +
Sbjct: 3279 HSMALTESGEVFSWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEIIQMACGFKHSAVV 3335

Query: 419  TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
            ++ GKLFTFG+G +G LG G+ S+  +P  V  L+        CG+ HT A V   G T 
Sbjct: 3336 SADGKLFTFGNGDYGRLGLGNTSNKKIPERVTALEGQMVGQVGCGLNHTLA-VSADGNT- 3393

Query: 479  GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
                     ++++GDG  G+LG G++  +  P  V     I   KV CG   ++ALT  G
Sbjct: 3394 ---------VWSFGDGDYGKLGLGNSTAKSTPQRVDPLCGIGVKKVCCGTQFSVALTKDG 3444

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
            +VF+ G      +G P S  +   R +    ++  ++ED+  G+ H   ++S  EV+ WG
Sbjct: 3445 RVFTFGQERL--IGQPESRSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTSTGEVWAWG 3502

Query: 597  KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSN 633
               +GQLG GD   ++ P LV AL+ K V+  V GSN
Sbjct: 3503 SNGDGQLGIGDTNARREPCLVTALQGKNVRQ-VWGSN 3538



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 168/338 (49%), Gaps = 39/338 (11%)

Query: 302  ACGSK-HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
            +CGS  H++ +T+ G++FSWG+G  GKLGHG       P+ I+AL G  I  +ACG  H+
Sbjct: 3273 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEIIQMACGFKHS 3332

Query: 361  CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
              V+  G L+T+G+G  + G LG  +  +  IP +V+  +EG  +  + CG  HT A+++
Sbjct: 3333 AVVSADGKLFTFGNG--DYGRLGLGNTSNKKIPERVTA-LEGQMVGQVGCGLNHTLAVSA 3389

Query: 421  AGK-LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G  +++FGDG +G LG G+ ++ S P+ V+ L  +      CG   + A+ +       
Sbjct: 3390 DGNTVWSFGDGDYGKLGLGNSTAKSTPQRVDPLCGIGVKKVCCGTQFSVALTK------- 3442

Query: 480  SNGLSSKKLFTWGDGAEGQLGHGDAEPR--VVPLCVKVSDDISFCKVACGHSITIALTAT 537
                   ++FT+G   E  +G  ++  R    P  V   +      V  G   ++ALT+T
Sbjct: 3443 -----DGRVFTFGQ--ERLIGQPESRSRNHNRPQQVPALEAFFVEDVVVGAEHSLALTST 3495

Query: 538  GQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
            G+V++ GS   GQLG     G    R E  +              +  +  K+    WG 
Sbjct: 3496 GEVWAWGSNGDGQLG----IGDTNARREPCL--------------VTALQGKNVRQVWGS 3537

Query: 598  GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
              +GQLG GD   ++ P LV  L+ K V+ +  G N +
Sbjct: 3538 NGDGQLGIGDTNARREPCLVTDLQGKNVRQISAGRNHS 3575



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 139/273 (50%), Gaps = 22/273 (8%)

Query: 370  YTWGDGIHNLGLLGQVSEISH-WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            Y WG G H     GQ++E     +   V+      Q   I CG   T  I + G +   G
Sbjct: 3186 YMWGGGRH-----GQLAETGRSLLTPTVTPSFS--QAQQIICGQNCTFVIQANGTVQACG 3238

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS-SKK 487
            +G++G LG G+          + L +L T++++   +    +V   G    S  L+ S +
Sbjct: 3239 EGSYGRLGQGNS---------DDLHQL-TIISALQGFVVTQLVTSCGSDGHSMALTESGE 3288

Query: 488  LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
            +F+WGDG  G+LGHG+++ +  P  ++        ++ACG   +  ++A G++F+ G+ D
Sbjct: 3289 VFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEIIQMACGFKHSAVVSADGKLFTFGNGD 3348

Query: 548  YGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGH 605
            YG+LG    S  K P R+   ++ + +  + CG  H +AV +  + V+++G G  G+LG 
Sbjct: 3349 YGRLGLGNTSNKKIPERVTA-LEGQMVGQVGCGLNHTLAVSADGNTVWSFGDGDYGKLGL 3407

Query: 606  GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G++  K TP  V+ L    VK V CG+ F+ A+
Sbjct: 3408 GNSTAKSTPQRVDPLCGIGVKKVCCGTQFSVAL 3440


>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 826

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 220/443 (49%), Gaps = 41/443 (9%)

Query: 198 YTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFI 257
           Y  A  + + L F+AS   D A++  S  D    + +S  +++  GSC       G+V++
Sbjct: 352 YYAAVILLEELYFLAS---DYASNCCSGPDENCNNSTSHSNANLSGSC-------GEVYV 401

Query: 258 WGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQI 317
           WG    + L  G           +     PK   S V  D Q +  G     L+   G +
Sbjct: 402 WGSNCTHQLAEGG----------QEKITTPKY--SAVFTDCQQVEAGQFCTFLIYSDGTV 449

Query: 318 FSWGEGSGGKLGHGVEADVSYPK--LIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
            + G+GS G+LG G   + S PK  L D      I      + H+ A+T +G++Y+WGDG
Sbjct: 450 GACGKGSYGRLGLGDSNNCSVPKKPLFDKKYVKKISSSKGSDGHSLALTTTGEVYSWGDG 509

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
             + G LG  +  +  IP+ V G + G  +  +  G  H+AA+T  G+L+T+GDG FG L
Sbjct: 510 --DYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWGDGEFGRL 567

Query: 436 GHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGA 495
           GH   SS + P +V++++ +  V  +CG  HT A+ +             K ++++G G 
Sbjct: 568 GHDYTSSKNFPTKVQSIESVGLV--ACGGSHTLAVSQ-----------DGKTIWSFGGGE 614

Query: 496 EGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG 555
            G+LGHGD   ++ P  ++  + +   KVACG   ++A+T++GQ+++ G       GS  
Sbjct: 615 NGKLGHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCGAILGCGSAE 674

Query: 556 STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQT-P 614
            T   P  +E +++ + + DIACG  H+  ++ +SEVY WG  A GQ G G  ++  T P
Sbjct: 675 YTALRPRLVE-DLQSKRMVDIACGDSHVIALTHESEVYAWGNNAMGQCGQGHAQSPITRP 733

Query: 615 TLVEALRDKQVKSVVCGSNFTAA 637
             V  L    V  V  G++ + A
Sbjct: 734 KRVIGLDGVSVHQVSAGTSHSVA 756



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 160/328 (48%), Gaps = 24/328 (7%)

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           G+++ WG     +L  G +  ++ PK       ++   V  G+F T  +   G +   G 
Sbjct: 397 GEVYVWGSNCTHQLAEGGQEKITTPKYSAVF--TDCQQVEAGQFCTFLIYSDGTVGACGK 454

Query: 375 GIHNLGLLGQVSEISHWIPRK-VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
           G +    LG  +  S  +P+K +  +    +ISS      H+ A+T+ G+++++GDG +G
Sbjct: 455 GSYGRLGLGDSNNCS--VPKKPLFDKKYVKKISSSKGSDGHSLALTTTGEVYSWGDGDYG 512

Query: 434 ALGHGDRSSTSVPREVETLKELKTV-MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            LGHG  S+  +P+ V+     K V   S G  H+AA+ E              +L+TWG
Sbjct: 513 KLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTE------------DGELYTWG 560

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ-VFSMGSADYGQL 551
           DG  G+LGH     +  P  V+  + +    VACG S T+A++  G+ ++S G  + G+L
Sbjct: 561 DGEFGRLGHDYTSSKNFPTKVQSIESVGL--VACGGSHTLAVSQDGKTIWSFGGGENGKL 618

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
           G   +  +   ++   +   YI  +ACGS     V+S  ++Y WG GA   LG G  E  
Sbjct: 619 GHGDTNRQLKPKVIEALNGLYIRKVACGSQSSLAVTSSGQLYAWGCGA--ILGCGSAEYT 676

Query: 612 QT-PTLVEALRDKQVKSVVCGSNFTAAI 638
              P LVE L+ K++  + CG +   A+
Sbjct: 677 ALRPRLVEDLQSKRMVDIACGDSHVIAL 704



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 13/120 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G ++ WG G    +LG          +    AL P+++E         IACG  H + +T
Sbjct: 657 GQLYAWGCG---AILG--------CGSAEYTALRPRLVEDLQSKRMVDIACGDSHVIALT 705

Query: 313 KQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGEFHTCAVT-LSGDLY 370
            + ++++WG  + G+ G G  ++ ++ PK +  L+G ++H V+ G  H+ A T L  D Y
Sbjct: 706 HESEVYAWGNNAMGQCGQGHAQSPITRPKRVIGLDGVSVHQVSAGTSHSVAWTALPTDRY 765


>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 172/347 (49%), Gaps = 16/347 (4%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQ-IFSWGEGSGGKLGHGVE 333
           ++   D  +   P ++ +    +  S+ CG+ H   ++   + ++SWG G  G+LGHG  
Sbjct: 45  QLGHGDAEERHFPTIVSALDDCEISSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNS 104

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +D+  P+ I AL G  +  +ACG+ H  A+T  G++  WG   +    LG   ++    P
Sbjct: 105 SDLFIPQPIKALKGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLGHTEDVL--TP 162

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
            K++   EG+ +  +  G  HT A+T  GKL+ +G G +G LG GDR    VP +V  + 
Sbjct: 163 HKLTA-FEGVAVKMLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVA 221

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
                M +CG  HT  + E            S  ++T+G    GQLGHGD    ++P  V
Sbjct: 222 GELMKMVACGWRHTICVAE------------SGNMYTFGWSKYGQLGHGDFADHLIPHQV 269

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           +         +  G   T AL + G+++  G   +GQ+G   +  +   ++   ++ + +
Sbjct: 270 QALKSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVV 329

Query: 574 EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
             + CG  H   ++ +  VY+WG+G +GQLGHGD  ++ TP  +E L
Sbjct: 330 TVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEIL 376



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/345 (32%), Positives = 173/345 (50%), Gaps = 26/345 (7%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           +++ G+ H+V +     + SWG G  G+LGHG   +  +P ++ AL+   I  V CG  H
Sbjct: 18  ALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSALDDCEISSVTCGADH 77

Query: 360 TCAVTLSGD-LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
           T A++ S   +Y+WG G  + G LG  +    +IP+ +   ++GL++  I CG  H  AI
Sbjct: 78  TTALSNSTKTVYSWGWG--DFGRLGHGNSSDLFIPQPIKA-LKGLEVKQIACGDSHCLAI 134

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           T+ G++  +G    G LG G       P ++   + +   M + G  HT A+ E      
Sbjct: 135 TTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTTAVTE------ 188

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
             NG    KL+ WG G  G LG GD E R+VP  V          VACG   TI +  +G
Sbjct: 189 --NG----KLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELMKMVACGWRHTICVAESG 242

Query: 539 QVFSMGSADYGQLGSPGSTGKF-----PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
            +++ G + YGQLG     G F     P +++  +K + I+ I  G  H   + S   +Y
Sbjct: 243 NMYTFGWSKYGQLGH----GDFADHLIPHQVQA-LKSKKIQAITGGWRHTFALDSDGRLY 297

Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            WG    GQ+G G+ E++ +P LV+ L+D+ V  V CG   T A+
Sbjct: 298 GWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQCGWRHTLAM 342



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/68 (41%), Positives = 43/68 (63%)

Query: 571 RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
           R +  ++ G+ H   + S   V +WG+G +GQLGHGD E +  PT+V AL D ++ SV C
Sbjct: 14  RQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSALDDCEISSVTC 73

Query: 631 GSNFTAAI 638
           G++ T A+
Sbjct: 74  GADHTTAL 81



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 3/70 (4%)

Query: 277 SSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV 336
           ++ D+    L K L+  VV   Q   CG +H + +T +G ++SWG G+ G+LGHG   D 
Sbjct: 311 NTEDQSSPQLVKGLQDQVVTVVQ---CGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDR 367

Query: 337 SYPKLIDALN 346
           S PK I+ L+
Sbjct: 368 STPKRIEILS 377


>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
 gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
          Length = 4220

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 223/454 (49%), Gaps = 38/454 (8%)

Query: 187  EVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCH 246
            +V   T +A+     + V+ S +F+A   LDD   + +T          +VS S Q    
Sbjct: 2367 KVHGLTISARPKADEDDVAASFSFLA---LDD--DQDATRQRRLSRRKRSVSDSGQ---- 2417

Query: 247  EDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSK 306
               +G   VF+WG    + L  G + G +I         +P + E    L  Q IA GSK
Sbjct: 2418 ---EGQIKVFVWGLNDKDQL--GGLKGSKIK--------VPVLSEFIGALKVQQIAGGSK 2464

Query: 307  HAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVAC--GEFHTCAV 363
                V+  G++F+ GE + G+LG G + A+V+ P+ I+ L+   +  V+   G  H  A+
Sbjct: 2465 TLFAVSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMAL 2524

Query: 364  TLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGK 423
            T+ G L++WG+G    G LG  + ++   P+ +    +   +  + CG  H+AAI S+G+
Sbjct: 2525 TIEGKLFSWGEG--EDGKLGHGNRMNCDHPKLID-TFKSSCVRDMSCGSSHSAAILSSGE 2581

Query: 424  LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
            L+T+G G +G LGHGD  +   P++V++    + +  +CG      +      T      
Sbjct: 2582 LYTWGLGEYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGT------ 2635

Query: 484  SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
                +++WGDG  G+LG G +E   VP  V+       CKVACG   ++AL+ +G V++ 
Sbjct: 2636 ----VWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTW 2691

Query: 544  GSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
            G  DY +LG    T     +I   ++ + I D+A G+ H   V+   +V+ WG   +GQ 
Sbjct: 2692 GKGDYYRLGHGNDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQ 2751

Query: 604  GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            G+      + P LV  L  +++  V CGS+ + A
Sbjct: 2752 GNNTTTVNRRPQLVNGLEGQKITRVACGSSHSIA 2785



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 193/392 (49%), Gaps = 27/392 (6%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            + G G ++ WG      L  G++ G ++         LP+ +E+   +    I  G +  
Sbjct: 3350 WGGSGTIYGWGHNHRGQL--GSLEGAKVK--------LPQTIEALASIRPVQIVGGEQTL 3399

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT +G++++ G G GG+LG G    V+  K++++L    +  VA   G  H  A++  
Sbjct: 3400 FAVTAEGKVYATGYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSAD 3459

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            GD+Y+WG+G  + G LG  +  S   PR +   + G  +  I CG  H+A IT   +L+T
Sbjct: 3460 GDVYSWGEG--DDGKLGHGNRNSCDRPRVIEA-LRGKGVIDISCGGSHSACITQNHELYT 3516

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD     +P+ VE L+  + +  +CG          +G           
Sbjct: 3517 WGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACG----------SGDAQTLCLTDDD 3566

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   +P+ V+    +   KV CG   ++ALT +G V++ G  
Sbjct: 3567 CVWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSGAVYTWGKG 3626

Query: 547  DYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
            DY +LG       + P R+   ++ + +  IA GS H    +   EVYTWG    GQLG 
Sbjct: 3627 DYYRLGHGVDDHVRRPKRVAA-LQGKKVITIATGSLHCVASTDTGEVYTWGDNDEGQLGD 3685

Query: 606  GDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            G       P LV AL+ K++  V CGS  T A
Sbjct: 3686 GTTNAIARPRLVTALQGKKISRVACGSAHTIA 3717



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/276 (34%), Positives = 134/276 (48%), Gaps = 17/276 (6%)

Query: 306 KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTL 365
           KH + +T++G+++SWG G GGKLGHG  +    P L+  L G  +  ++CG  H+ AVT 
Sbjct: 27  KHFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTS 86

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGK 423
            G+LYTWG G  N G LG  S     +P  VSG + G  I  + CG    HT A    G 
Sbjct: 87  EGELYTWGRG--NYGRLGHGSSEDQLVPVLVSG-LRGHHIIDVACGSGDAHTLAAADDGT 143

Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
           ++++GDG +G LG G       P+ +E L+ L      CG   + A+        GS   
Sbjct: 144 VWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTR-----DGS--- 195

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
               ++TWG G   +LGHG  +    P  V+  D      V+ G    +ALT  G+V+  
Sbjct: 196 ----VWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEVYCW 251

Query: 544 GSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
           G  D GQLG      +    +   +  + I  IACG
Sbjct: 252 GRNDQGQLGDIDCQIRPEPTLVSGLASKGIVGIACG 287



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 137/275 (49%), Gaps = 17/275 (6%)

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
           H  A+T  G++Y+WG G  + G LG         P  V+G + G Q+  I CG  H+AA+
Sbjct: 28  HFLALTREGEVYSWGSG--DGGKLGHGDTSPREEPTLVTG-LAGKQVIRISCGSTHSAAV 84

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           TS G+L+T+G G +G LGHG      VP  V  L+    +  +CG          +G   
Sbjct: 85  TSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACG----------SGDAH 134

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
                    +++WGDG  G+LG G ++    P  ++    +  CKV CG   ++ALT  G
Sbjct: 135 TLAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDG 194

Query: 539 QVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
            V++ G  +  +LG  G+    + P  +E  +  +++ D++ GS H   ++   EVY WG
Sbjct: 195 SVWTWGKGEGFRLGH-GTEDHVRHPKLVEA-LDGKHVVDVSVGSIHCLALTDAGEVYCWG 252

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
           +   GQLG  D + +  PTLV  L  K +  + CG
Sbjct: 253 RNDQGQLGDIDCQIRPEPTLVSGLASKGIVGIACG 287



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 117/228 (51%), Gaps = 16/228 (7%)

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           H  A+T  G+++++G G  G LGHGD S    P  V  L   + +  SCG  H+AA+   
Sbjct: 28  HFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVT-- 85

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSIT 531
                     S  +L+TWG G  G+LGHG +E ++VP+ V          VACG   + T
Sbjct: 86  ----------SEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHT 135

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           +A    G V+S G  DYG+LG  GS G K P  IE  ++   +  + CG+     ++   
Sbjct: 136 LAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSIE-RLQGLGVCKVYCGAQFSLALTRDG 194

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            V+TWGKG   +LGHG  ++ + P LVEAL  K V  V  GS    A+
Sbjct: 195 SVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLAL 242



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 141/295 (47%), Gaps = 28/295 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+V+ WG G G  L  G        ++ R +  L   L    V+    I+CGS H+  VT
Sbjct: 36  GEVYSWGSGDGGKLGHG-------DTSPREEPTLVTGLAGKQVI---RISCGSTHSAAVT 85

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLY 370
            +G++++WG G+ G+LGHG   D   P L+  L G +I  VAC  G+ HT A    G ++
Sbjct: 86  SEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVW 145

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG+        P+ +  +++GL +  + CG   + A+T  G ++T+G G
Sbjct: 146 SWGDG--DYGKLGRGGSDGCKNPKSIE-RLQGLGVCKVYCGAQFSLALTRDGSVWTWGKG 202

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
               LGHG       P+ VE L     V  S G  H  A+ +              +++ 
Sbjct: 203 EGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAG------------EVYC 250

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
           WG   +GQLG  D + R  P  V          +ACG + + A +  GQ +S+G+
Sbjct: 251 WGRNDQGQLGDIDCQIRPEPTLVSGLASKGIVGIACGPAQSFAWSCAGQ-WSVGT 304



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 54/174 (31%), Positives = 93/174 (53%), Gaps = 5/174 (2%)

Query: 470 IVEVAGKTSGSNGLSSKK---LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           IV+V   T G + L+  +   +++WG G  G+LGHGD  PR  P  V         +++C
Sbjct: 17  IVQVVTHTDGKHFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISC 76

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS--YHIA 584
           G + + A+T+ G++++ G  +YG+LG   S  +    +   ++  +I D+ACGS   H  
Sbjct: 77  GSTHSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTL 136

Query: 585 VVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             +    V++WG G  G+LG G ++  + P  +E L+   V  V CG+ F+ A+
Sbjct: 137 AAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQFSLAL 190



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 119/253 (47%), Gaps = 27/253 (10%)

Query: 227  DSFRISLSSAVSSSSQGSCHED-FDGLGDVFIWGEG----LGNGLLGGAVNGVEISSADR 281
            D+F+   SS V   S GS H       G+++ WG G    LG+G              D 
Sbjct: 2556 DTFK---SSCVRDMSCGSSHSAAILSSGELYTWGLGEYGRLGHG--------------DN 2598

Query: 282  RDALLPKVLESTVVLDAQSIACGSKHA--VLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
               L PK ++S        IACGS+ A  + +T  G ++SWG+G  GKLG G     S P
Sbjct: 2599 YTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRGGSEGCSVP 2658

Query: 340  KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ 399
              ++ L G  +  VACG   + A++ SG ++TWG G  +   LG  ++     P+ V G 
Sbjct: 2659 NPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKG--DYYRLGHGNDTHVRKPQIVDG- 2715

Query: 400  MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
            + G +I  +  G  H  A+T +G++F +GD   G  G+   +    P+ V  L+  K   
Sbjct: 2716 LRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQGNNTTTVNRRPQLVNGLEGQKITR 2775

Query: 460  ASCGVWHTAAIVE 472
             +CG  H+ A  E
Sbjct: 2776 VACGSSHSIAWAE 2788



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 101/192 (52%), Gaps = 21/192 (10%)

Query: 238  SSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLD 297
            S  +Q  C  D D    V+ WG+G    L  G  +G +I          P  +ES + L 
Sbjct: 3554 SGDAQTLCLTDDDC---VWSWGDGDYGKLGRGGSDGCKI----------PMKVESLIGLG 3600

Query: 298  AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
               + CGS+ +V +T+ G +++WG+G   +LGHGV+  V  PK + AL G  +  +A G 
Sbjct: 3601 VSKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGVDDHVRRPKRVAALQGKKVITIATGS 3660

Query: 358  FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
             H  A T +G++YTWGD  ++ G LG  +  +   PR V+  ++G +IS + CG  HT A
Sbjct: 3661 LHCVASTDTGEVYTWGD--NDEGQLGDGTTNAIARPRLVTA-LQGKKISRVACGSAHTIA 3717

Query: 418  ITS-----AGKL 424
             ++     AG+L
Sbjct: 3718 WSTCKPVNAGRL 3729



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 10/220 (4%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   +P+ +E L  ++ V    G   T   V   GK   +
Sbjct: 3353 SGTIYGWGHNHRGQLGSLEGAKVKLPQTIEALASIRPVQIVGGE-QTLFAVTAEGKVYAT 3411

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
                  +L   G      +   ++   VV         +    V  G    +AL+A G V
Sbjct: 3412 GYGHGGRLGLGGTDTVTSIKMLESLQHVV---------VRKVAVHSGGKHAMALSADGDV 3462

Query: 541  FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
            +S G  D G+LG          R+   ++ + + DI+CG  H A ++   E+YTWGKG  
Sbjct: 3463 YSWGEGDDGKLGHGNRNSCDRPRVIEALRGKGVIDISCGGSHSACITQNHELYTWGKGRY 3522

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            G+LGHGD+E++  P +VEALR  +V  V CGS     +CL
Sbjct: 3523 GRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCL 3562



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P+ +   +  ++   I  G     A+T+ GK+
Sbjct: 3353 SGTIYGWG---HNHRGQLGSLEGAKVKLPQTIEA-LASIRPVQIVGGEQTLFAVTAEGKV 3408

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
            +  G G  G LG G   + +  + +E+L+ +              + +VA  + G + ++
Sbjct: 3409 YATGYGHGGRLGLGGTDTVTSIKMLESLQHV-------------VVRKVAVHSGGKHAMA 3455

Query: 485  ---SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
                  +++WG+G +G+LGHG+      P  ++         ++CG S +  +T   +++
Sbjct: 3456 LSADGDVYSWGEGDDGKLGHGNRNSCDRPRVIEALRGKGVIDISCGGSHSACITQNHELY 3515

Query: 542  SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
            + G   YG+LG   S  +   ++   ++   + D+ACGS       ++    V++WG G 
Sbjct: 3516 TWGKGRYGRLGHGDSEDQLLPKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGD 3575

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  VE+L    V  V CGS F+ A+
Sbjct: 3576 YGKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQFSVAL 3614



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/222 (29%), Positives = 97/222 (43%), Gaps = 17/222 (7%)

Query: 423  KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            K+F +G      LG    S   VP   E +  LK             + ++AG +     
Sbjct: 2422 KVFVWGLNDKDQLGGLKGSKIKVPVLSEFIGALK-------------VQQIAGGSKTLFA 2468

Query: 483  LSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSITIALTATG 538
            +S   K+F  G+   G+LG G     V VP  ++        KV+   G    +ALT  G
Sbjct: 2469 VSHDGKVFACGESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEG 2528

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            ++FS G  + G+LG          ++    K   + D++CGS H A + S  E+YTWG G
Sbjct: 2529 KLFSWGEGEDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWGLG 2588

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGDN     P  V++    +V  + CGS     + L
Sbjct: 2589 EYGRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLAL 2630


>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
            mutus]
          Length = 4874

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 199/399 (49%), Gaps = 44/399 (11%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 4000 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4046

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4047 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4106

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4107 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4163

Query: 431  TFGALGHGDRSSTSVPREVETLK----------ELKTVMASCGVWHTAAIVEVAGKTSGS 480
             +G LG G+ S+  +P  V  L+           L  +  +CG+ HT A+        GS
Sbjct: 4164 DYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAV-----SADGS 4218

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
                   ++ +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V
Sbjct: 4219 ------MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHV 4272

Query: 541  FSMGSADYGQLGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            ++ G      +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  
Sbjct: 4273 YTFGQDRL--IGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSN 4330

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            + GQLG G   + + PTLV  L+ K V+ +  G   +AA
Sbjct: 4331 SEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAA 4369



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 371 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVIST 418

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 419 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 478

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 479 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 536

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 537 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 583

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 584 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 643

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 644 CGSSEATALRPKLIEELAATRIV-DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 702

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 703 PITKPKKVSGLDGIAIQQISAGTSHSLA 730



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 159/339 (46%), Gaps = 38/339 (11%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 4001 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4054

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4055 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4111

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 4112 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4159

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKV----------SDDISFCKVACGHSITIALTATG-Q 539
            +G+G  G+LG G+   + +P  V            ++ + F +VACG + T+A++A G  
Sbjct: 4160 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSM 4219

Query: 540  VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
            V++ G  DYG+LG   ST K   +    +    I+ +ACG+     ++    VYT+G+  
Sbjct: 4220 VWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDR 4279

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               L  G   N   P  +  L    ++ V  G+  T A+
Sbjct: 4280 LIGLPEGRARNHNRPQQIPVLAGVVIEDVAVGAEHTLAL 4318



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 140/287 (48%), Gaps = 36/287 (12%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      +P       +  Q+    CG   T  I + G + 
Sbjct: 4000 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFSQAQQV---ICGQNCTFVIQANGTVL 4051

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4052 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4101

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+
Sbjct: 4102 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4159

Query: 543  MGSADYGQLG-SPGSTGKFPTRIE-------GNIKHR--YIEDIACGSYH-IAVVSSKSE 591
             G+ DYG+LG    S  K P R+        G  ++   +   +ACG  H +AV +  S 
Sbjct: 4160 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSADGSM 4219

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            V+ +G G  G+LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 4220 VWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 4266



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 434 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 491

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 492 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 540

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 541 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 597

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 598 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 654

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 655 KLIEELAATRIVDISIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 702

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 703 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 733



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 405 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 464

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 465 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 512

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 513 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 568

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 569 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 628

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 629 STGQVYAWGCGACLGC 644



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4299 VLAGVVIED---VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 4355

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 4356 NVRQISAGRCHSAAWT 4371


>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
          Length = 1609

 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 190/389 (48%), Gaps = 34/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV+++G G  +G L    +GV          L+P++ +S    +A+ + CG     ++  
Sbjct: 751  DVYLFGAG-RHGQLAEVGSGV----------LVPQLTKS--FHEARKVVCGQNCTFIINN 797

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
             G + S GEGS G+LG G   D +    I AL G  +  +A     + H  A+T +G+++
Sbjct: 798  NGVVLSCGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVF 857

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   + G ++  + CG  H+A +T  GKLFTFG G
Sbjct: 858  SWGDG--DYGKLGHGNSDRQRRPRQIEA-LRGQEVVQVACGFKHSAVVTIDGKLFTFGYG 914

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG  ++  +P  V  L+       +CG+ HT  +             S   L  
Sbjct: 915  DYGRLGHGSTTNKKIPERVMALENYIIGQVACGLNHTVIV-------------SQDNLTV 961

Query: 491  W--GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            W  GDG  G+LG G    +  P  ++V   +   K++CG   T ALT  G++F  G    
Sbjct: 962  WACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQDRM 1021

Query: 549  GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
                   ++  F  ++   +   +I DI+ G+ H   ++SK  VYTWG   +GQLG G  
Sbjct: 1022 CGNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHT 1081

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + Q PTLVE+L  K ++ +  G   +AA
Sbjct: 1082 NHVQEPTLVESLSGKNIRQISAGRTHSAA 1110



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 114/396 (28%), Positives = 176/396 (44%), Gaps = 50/396 (12%)

Query: 307  HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
            HA+ +T+ G++FSWG+G  GKLGHG       P+ I+AL G  +  VACG  H+  VT+ 
Sbjct: 846  HAIALTENGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVTID 905

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG-KLF 425
            G L+T+G G  + G LG  S  +  IP +V   +E   I  + CG  HT  ++     ++
Sbjct: 906  GKLFTFGYG--DYGRLGHGSTTNKKIPERVMA-LENYIIGQVACGLNHTVIVSQDNLTVW 962

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
              GDG +G LG G  S+ + P ++E L  +     SCG   TAA+               
Sbjct: 963  ACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQFTAALTW------------D 1010

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
             KLF +G             P   P  V          ++ G   TIALT+ G V++ GS
Sbjct: 1011 GKLFMFGQDRMCGNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGS 1070

Query: 546  ADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
               GQLG  G T     PT +E ++  + I  I+ G  H A  S + +        +  L
Sbjct: 1071 NTDGQLGL-GHTNHVQEPTLVE-SLSGKNIRQISAGRTHSAAWSCEHD-----DAGHTLL 1123

Query: 604  GHGDNENKQTPTLVE-ALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFR 662
            G  ++   Q   L + ++ D + + VV  S F+  I              S      N++
Sbjct: 1124 GTPESIPSQYDLLADVSVLDARGRLVVL-SKFSDLI--------------SASWPLLNYQ 1168

Query: 663  RRRHNC-----YNCGLVYCKLCSSKKSMKTALAPEI 693
            +++H+      Y CG      C S  ++++ L P +
Sbjct: 1169 QKQHSTSDVTPYTCG----NSCFSSSAIRSILLPRV 1200



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 145/301 (48%), Gaps = 33/301 (10%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y +G G H     GQ++E+     +P+      E  ++    CG   T  I + G + 
Sbjct: 751  DVYLFGAGRH-----GQLAEVGSGVLVPQLTKSFHEARKV---VCGQNCTFIINNNGVVL 802

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETL-----KELKTVMASCGVWHTAAIVEVAGKTSGS 480
            + G+G++G LG G+   ++    +  L     K+L T   S G  H  A+ E        
Sbjct: 803  SCGEGSYGRLGQGNSDDSNRLTHISALQGFIVKQLATSTGSDG--HAIALTE-------- 852

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
            NG    ++F+WGDG  G+LGHG+++ +  P  ++        +VACG   +  +T  G++
Sbjct: 853  NG----EVFSWGDGDYGKLGHGNSDRQRRPRQIEALRGQEVVQVACGFKHSAVVTIDGKL 908

Query: 541  FSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKS-EVYTWGKG 598
            F+ G  DYG+LG   +T K  P R+   +++  I  +ACG  H  +VS  +  V+  G G
Sbjct: 909  FTFGYGDYGRLGHGSTTNKKIPERVMA-LENYIIGQVACGLNHTVIVSQDNLTVWACGDG 967

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH-KGVSIADHSICSGCRN 657
              G+LG G    K +PT +E L    +K + CG+ FTAA+    K        +C  C  
Sbjct: 968  DYGKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQDRMCGNCET 1027

Query: 658  Q 658
            +
Sbjct: 1028 R 1028


>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
          Length = 5197

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 126/394 (31%), Positives = 200/394 (50%), Gaps = 37/394 (9%)

Query: 255  VFIWG----EGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            V +WG    E LG GL G  V              LP        L    IA GSK   +
Sbjct: 3243 VLVWGLNDKEQLG-GLKGSKVK-------------LPTYSSVLSQLKPIHIAGGSKSLFI 3288

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            V++ G++++ GEG+ G+LG G   +V  PK +  L+   +  VA   G  H  A+TL G 
Sbjct: 3289 VSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGK 3348

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +++WG+G    G LG  + ++   P+ +   +   +I  I CG  H+AAITS+G+L+T+G
Sbjct: 3349 VFSWGEG--EDGKLGHGNRLTLEKPKLIE-TLRTKRIRDIACGSSHSAAITSSGELYTWG 3405

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGHGD  +   P+ V  L + + V  +CG            + + +  L+ + L
Sbjct: 3406 LGEYGRLGHGDNCTQLKPKLVTALADHRVVQVACG-----------SRDAQTLCLTEEGL 3454

Query: 489  -FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
             F+WGDG  G+LG G +E   +P  V+  + +   ++ CG   ++ALT +G+V++ G  D
Sbjct: 3455 VFSWGDGDFGKLGRGGSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGD 3514

Query: 548  YGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            Y +LG       + PT I+G ++ + +  +A G+ H   V+   +VY WG   +GQ G G
Sbjct: 3515 YYRLGHGTDQHVRKPTPIQG-LRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSG 3573

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +    + P+LV  L    V  V CGS+ + A  L
Sbjct: 3574 NTIVNKKPSLVLGLDGIFVNRVACGSSHSVAWSL 3607



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/398 (31%), Positives = 200/398 (50%), Gaps = 29/398 (7%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            + G   +F WG     G LGG ++G  I         +P   E+  +L    IA G +  
Sbjct: 4373 WGGASTIFGWGHN-HRGQLGG-LDGSRIK--------MPTPCEALSLLRPIQIAGGEQTL 4422

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT  G++++ G G+GG+LG G    V+ P L+++L    I  VA   G  H  A++  
Sbjct: 4423 YAVTPDGKLYATGYGAGGRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSD 4482

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G++++WG+G    G LG  +  S+  P+ +   + G+ +  I CG  H+A ITS G + T
Sbjct: 4483 GEVFSWGEG--EDGKLGHGNRDSYDRPKLIEA-LSGIGVIDIACGSAHSACITSQGHVLT 4539

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+ VE L   + +  +CG          +G           
Sbjct: 4540 WGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACG----------SGDAQTLCITDDD 4589

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   VP+ ++    +   KV CG   ++ALT +G V++ G  
Sbjct: 4590 NVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKG 4649

Query: 547  DYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
            DY +LG  G+T   + P ++   ++ + I  IA GS H    S   EV+TWG    GQLG
Sbjct: 4650 DYHRLGH-GNTDHVRRPKKVAA-LQGKKIISIATGSLHCVACSDGGEVFTWGDNDEGQLG 4707

Query: 605  HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHK 642
             G     Q P LV++L+ K +  V+CGS  T A+  ++
Sbjct: 4708 DGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALSTYQ 4745



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 112/336 (33%), Positives = 166/336 (49%), Gaps = 33/336 (9%)

Query: 253  GDVFIWGEGLGNGLLG-GAVNGVEISSADRRDALLPKVLE--STVVLDAQSIACGSKHAV 309
            G ++  GEG  NG LG G  N V            PK +   S  V+   ++  G KHA+
Sbjct: 3293 GKLYACGEGT-NGRLGLGHNNNVPT----------PKQVPILSQYVVKKVAVHSGGKHAM 3341

Query: 310  LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
             +T  G++FSWGEG  GKLGHG    +  PKLI+ L    I  +ACG  H+ A+T SG+L
Sbjct: 3342 ALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGEL 3401

Query: 370  YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTF 427
            YTWG G    G LG     +   P+ V+  +   ++  + CG     T  +T  G +F++
Sbjct: 3402 YTWGLG--EYGRLGHGDNCTQLKPKLVTA-LADHRVVQVACGSRDAQTLCLTEEGLVFSW 3458

Query: 428  GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
            GDG FG LG G     S+P +VE L  +  +   CG   + A+ +            S +
Sbjct: 3459 GDGDFGKLGRGGSEGCSIPHQVERLNGVGVMQIECGAQFSLALTK------------SGE 3506

Query: 488  LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
            ++TWG G   +LGHG  +    P  ++         VA G    +A+T +GQV++ G  D
Sbjct: 3507 VWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDND 3566

Query: 548  YGQLGSPGS-TGKFPTRIEGNIKHRYIEDIACGSYH 582
            +GQ GS  +   K P+ + G +   ++  +ACGS H
Sbjct: 3567 HGQQGSGNTIVNKKPSLVLG-LDGIFVNRVACGSSH 3601



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 159/320 (49%), Gaps = 27/320 (8%)

Query: 218  DANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEIS 277
            D+ +  +  +S +  +   V+ +S G         G+VF WGEG  +G LG         
Sbjct: 4448 DSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEG-EDGKLGHG----NRD 4502

Query: 278  SADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS 337
            S DR     PK++E+   +    IACGS H+  +T QG + +WG+G  G+LGHG   D  
Sbjct: 4503 SYDR-----PKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQL 4557

Query: 338  YPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRK 395
             PKL++AL G     +AC  G+  T  +T   ++++WGDG  + G LG+       +P K
Sbjct: 4558 QPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDG--DYGKLGRGGSDGCKVPMK 4615

Query: 396  VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
            +   + GL ++ + CG   + A+T +G ++T+G G +  LGHG+      P++V  L+  
Sbjct: 4616 IE-SLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGK 4674

Query: 456  KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
            K +  + G  H  A          S+G    ++FTWGD  EGQLG G       P  V+ 
Sbjct: 4675 KIISIATGSLHCVAC---------SDG---GEVFTWGDNDEGQLGDGTVSAIQRPRLVQS 4722

Query: 516  SDDISFCKVACGHSITIALT 535
                   KV CG + T+AL+
Sbjct: 4723 LQGKHIVKVICGSAHTLALS 4742



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 152/315 (48%), Gaps = 30/315 (9%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA- 354
           +  + +AC      ++T  GQ+ S    +          D + PK I+ L   NI  +A 
Sbjct: 582 VQVRQVACSETSIYILTTTGQVLSLQHSNCHT------PDTTAPKPIEGLESVNIVQLAA 635

Query: 355 -CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
            C   H  A+T +GD+++WG+G    G LG     S  IP ++    E  Q++ + CG  
Sbjct: 636 HCEGRHVLALTATGDVFSWGNG--EGGRLGHGDTSSKDIPTRIVALAER-QVTGVFCGSS 692

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS--CGVWHTAAIV 471
           ++AAIT+AG+L+T+G GT+G LGHG+     +P  V+ LK+ + +  +  CG  H+  + 
Sbjct: 693 YSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLCVT 752

Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV---SDDISFCKVACGH 528
           +               ++ WGDG  G+LG+G      VP+ +++   SD     KV  G 
Sbjct: 753 DTG------------IVYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSD--GAVKVFSGS 798

Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
             ++AL   G V+S G    G+LG   S      +    ++ + I D+A G  H   +++
Sbjct: 799 HFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALEGKNIVDLAVGLAHCLALTA 858

Query: 589 KSEVYTWGKGANGQL 603
             E+Y WG+    QL
Sbjct: 859 SGELYGWGRNDFQQL 873



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 147/294 (50%), Gaps = 20/294 (6%)

Query: 269 GAVNGVEISSADRRDALLPKVLESTVVLDAQSIA--CGSKHAVLVTKQGQIFSWGEGSGG 326
           G V  ++ S+    D   PK +E    ++   +A  C  +H + +T  G +FSWG G GG
Sbjct: 601 GQVLSLQHSNCHTPDTTAPKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGG 660

Query: 327 KLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVS 386
           +LGHG  +    P  I AL    +  V CG  ++ A+T +G+LYTWG G +  G LG  +
Sbjct: 661 RLGHGDTSSKDIPTRIVALAERQVTGVFCGSSYSAAITAAGELYTWGRGTY--GRLGHGN 718

Query: 387 EISHWIPR--KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS 444
                +P   +V  Q   + + ++ CG  H+  +T  G ++ +GDG FG LG+G  + +S
Sbjct: 719 SEDKHLPTIVQVLKQQRVIHV-ALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSS 777

Query: 445 VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGD 503
           VP  +E        +  C    +   V+V   +  S  L     +++WG G  G+LGHG 
Sbjct: 778 VPVAIE--------LPQC----SDGAVKVFSGSHFSVALGRDGTVYSWGKGHGGRLGHGH 825

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGST 557
           +E    P  ++  +  +   +A G +  +ALTA+G+++  G  D+ QL  P  T
Sbjct: 826 SEHTASPKAIQALEGKNIVDLAVGLAHCLALTASGELYGWGRNDFQQLCPPCVT 879



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 144/309 (46%), Gaps = 54/309 (17%)

Query: 342 IDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH--------WIP 393
           I+   G  +  VAC E                  I+ L   GQV  + H          P
Sbjct: 576 IELPAGVQVRQVACSE----------------TSIYILTTTGQVLSLQHSNCHTPDTTAP 619

Query: 394 RKVSGQMEGLQISSIC--CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
           + + G +E + I  +   C   H  A+T+ G +F++G+G  G LGHGD SS  +P  +  
Sbjct: 620 KPIEG-LESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVA 678

Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPL 511
           L E +     CG  ++AAI             ++ +L+TWG G  G+LGHG++E + +P 
Sbjct: 679 LAERQVTGVFCGSSYSAAIT------------AAGELYTWGRGTYGRLGHGNSEDKHLPT 726

Query: 512 CVKVSDDISFCKVA--CGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIE--- 565
            V+V        VA  CG + ++ +T TG V++ G  D+G+LG+    G   P  IE   
Sbjct: 727 IVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIELPQ 786

Query: 566 ---GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRD 622
              G +K      +  GS+    +     VY+WGKG  G+LGHG +E+  +P  ++AL  
Sbjct: 787 CSDGAVK------VFSGSHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALEG 840

Query: 623 KQVKSVVCG 631
           K +  +  G
Sbjct: 841 KNIVDLAVG 849



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 113/245 (46%), Gaps = 29/245 (11%)

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGD--RSSTSVPREVETLKELKTVM 459
           G+Q+  + C       +T+ G++ +        L H +     T+ P+ +E L+ +  V 
Sbjct: 581 GVQVRQVACSETSIYILTTTGQVLS--------LQHSNCHTPDTTAPKPIEGLESVNIVQ 632

Query: 460 --ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
             A C   H  A+             ++  +F+WG+G  G+LGHGD   + +P  +    
Sbjct: 633 LAAHCEGRHVLALT------------ATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVALA 680

Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIE-D 575
           +     V CG S + A+TA G++++ G   YG+LG   S  K  PT ++   + R I   
Sbjct: 681 ERQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVA 740

Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALR--DKQVKSVVCGSN 633
           + CG  H   V+    VY WG G  G+LG+G       P  +E  +  D  VK V  GS+
Sbjct: 741 LGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCNGSSVPVAIELPQCSDGAVK-VFSGSH 799

Query: 634 FTAAI 638
           F+ A+
Sbjct: 800 FSVAL 804



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 44/111 (39%), Positives = 71/111 (63%), Gaps = 2/111 (1%)

Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
            +ALTATG VFS G+ + G+LG   ++ K  PTRI   +  R +  + CGS + A +++ 
Sbjct: 642 VLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVA-LAERQVTGVFCGSSYSAAITAA 700

Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            E+YTWG+G  G+LGHG++E+K  PT+V+ L+ ++V  V  G     ++C+
Sbjct: 701 GELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLCV 751



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 129/304 (42%), Gaps = 35/304 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           GDVF WG G G  L  G     + SS D     +P  + +        + CGS ++  +T
Sbjct: 649 GDVFSWGNGEGGRLGHG-----DTSSKD-----IPTRIVALAERQVTGVFCGSSYSAAIT 698

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA--CGEFHTCAVTLSGDLY 370
             G++++WG G+ G+LGHG   D   P ++  L    +  VA  CG+ H+  VT +G +Y
Sbjct: 699 AAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVY 758

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            WGDG  + G LG  +     +P  +           +  G   + A+   G ++++G G
Sbjct: 759 AWGDG--DFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKG 816

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             G LGHG    T+ P+ ++ L+    V  + G+ H  A+             +S +L+ 
Sbjct: 817 HGGRLGHGHSEHTASPKAIQALEGKNIVDLAVGLAHCLALT------------ASGELYG 864

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG     QL          P CV     +    +    ++ IA  A G   S+       
Sbjct: 865 WGRNDFQQL---------CPPCVTRDPIVLLPILTTPPTLRIAGMAAGGAQSIVWCHSST 915

Query: 551 LGSP 554
           LG P
Sbjct: 916 LGIP 919



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 6/127 (4%)

Query: 513 VKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY 572
           +++   +   +VAC  +    LT TGQV S+    +    +P +T   P  IEG      
Sbjct: 576 IELPAGVQVRQVACSETSIYILTTTGQVLSL---QHSNCHTPDTTA--PKPIEGLESVNI 630

Query: 573 IEDIA-CGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
           ++  A C   H+  +++  +V++WG G  G+LGHGD  +K  PT + AL ++QV  V CG
Sbjct: 631 VQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVALAERQVTGVFCG 690

Query: 632 SNFTAAI 638
           S+++AAI
Sbjct: 691 SSYSAAI 697



 Score = 46.6 bits (109), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 48/103 (46%), Gaps = 2/103 (1%)

Query: 539  QVFSMGSADYGQLGS-PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
            +V   G  D  QLG   GS  K PT      + + I  IA GS  + +VS   ++Y  G+
Sbjct: 3242 KVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIH-IAGGSKSLFIVSQDGKLYACGE 3300

Query: 598  GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            G NG+LG G N N  TP  V  L    VK V   S    A+ L
Sbjct: 3301 GTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMAL 3343


>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
          Length = 4305

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 118/373 (31%), Positives = 191/373 (51%), Gaps = 27/373 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G V G ++         +P    +   L    IA GSK   +V+  
Sbjct: 3059 VFVWGLNDKDQL--GGVKGSKVK--------VPVFSPALSALRPVHIAGGSKTLFIVSHD 3108

Query: 315  GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTW 372
            G++F+ GEG+ G+LG G   +VS P+    L+   +  VA   G  H  A+T  G +Y+W
Sbjct: 3109 GKLFACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGKVYSW 3168

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            G+G    G LG  + I+   PR +   + G ++ SI CG  H+A +T+ G L+T+G G +
Sbjct: 3169 GEG--EDGKLGHGNRITLEAPRLIE-SLAGERVISIACGSAHSACVTARGHLYTWGLGEY 3225

Query: 433  GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            G LGHGD +   VP+ VE L   + +  +CG      +   A            K+F+WG
Sbjct: 3226 GRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTLALTA----------CGKVFSWG 3275

Query: 493  DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            DG  G+LG G ++   +P+ V+  + +   +V CG   ++ALT  G+V++ G  DY +LG
Sbjct: 3276 DGDFGKLGRGGSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRLG 3335

Query: 553  SP-GSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
                +  + PT +E  ++ R +  +A G+ H   V+S+++V+ WG   +GQ G+G     
Sbjct: 3336 HGCDAHVRRPTLVEA-LRGRRVIHVAVGALHCLAVTSENQVWAWGDNDHGQQGNGTTCVN 3394

Query: 612  QTPTLVEALRDKQ 624
            + P LV  +   Q
Sbjct: 3395 RRPALVAGVEGVQ 3407



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 107/305 (35%), Positives = 151/305 (49%), Gaps = 29/305 (9%)

Query: 253  GDVFIWGEGLGNGLLG-GAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
            G +F  GEG  NG LG G  N V   S  R +  L  VL   V     ++  G KHA+ +
Sbjct: 3109 GKLFACGEGT-NGRLGLGHSNNV---STPRANPYLSHVLVRRV-----AVHSGGKHALAL 3159

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T  G+++SWGEG  GKLGHG    +  P+LI++L G  +  +ACG  H+  VT  G LYT
Sbjct: 3160 TADGKVYSWGEGEDGKLGHGNRITLEAPRLIESLAGERVISIACGSAHSACVTARGHLYT 3219

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGD 429
            WG G    G LG   +    +P+ V   +   ++  + CG     T A+T+ GK+F++GD
Sbjct: 3220 WGLG--EYGRLGHGDDNIQLVPKMVEA-LANYRVIQVACGSRDAQTLALTACGKVFSWGD 3276

Query: 430  GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
            G FG LG G     ++P  VE L  L      CG   + A+                +++
Sbjct: 3277 GDFGKLGRGGSDGCAIPMNVERLNSLGVTQVECGAQFSLALTR------------DGEVW 3324

Query: 490  TWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            TWG G   +LGHG DA  R  P  V+         VA G    +A+T+  QV++ G  D+
Sbjct: 3325 TWGKGDYFRLGHGCDAHVR-RPTLVEALRGRRVIHVAVGALHCLAVTSENQVWAWGDNDH 3383

Query: 549  GQLGS 553
            GQ G+
Sbjct: 3384 GQQGN 3388



 Score =  149 bits (377), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 182/379 (48%), Gaps = 45/379 (11%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            V+ WG     G LGG V G ++ +        P    +   L+   +  G +    VT  
Sbjct: 3953 VYGWGHN-HRGQLGG-VEGAKVRT--------PTPCHALAALNPVQLVGGEQTLFAVTPD 4002

Query: 315  GQIFSWGEGSGGKLGHGVEADVSYPKLID----------ALNGSNIHMVACGEFHTCAVT 364
            G++++ G G+GG+LG G    VS P L+           A N    H +        A++
Sbjct: 4003 GKVYATGYGAGGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKHCL--------ALS 4054

Query: 365  LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
              G++Y+WG+G    G LG  + +S+  P+ ++  + GL++  I CG  H+A +T+ G++
Sbjct: 4055 ADGEVYSWGEG--EDGKLGHGNRVSYDRPKLITA-LSGLEVVCIACGGAHSACLTARGRI 4111

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
            +T+G G +G LGHGD     +P+ VE L   + +  +CG          +G         
Sbjct: 4112 YTWGKGRYGRLGHGDSEDQLIPKLVEALSSFRVIDVACG----------SGDAQTLCITD 4161

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
               +++WGDG  G+LG G +E   +P+ +     +   KV CG   ++AL   G V++ G
Sbjct: 4162 DDNVWSWGDGDYGKLGRGGSEGCKLPMRIDCLKGLRVIKVECGSQFSVALCQCGSVYTWG 4221

Query: 545  SADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
              DY +LG  GS    + P R+ G ++ + I  IA GS H    +   EVYTWG    GQ
Sbjct: 4222 KGDYHRLGH-GSYEHVRRPMRVTG-MQGKMIVSIATGSLHCVACTDTGEVYTWGDNDEGQ 4279

Query: 603  LGHGDNENKQTPTLVEALR 621
            LG G     Q P L+ AL+
Sbjct: 4280 LGDGTTLAAQRPRLLMALQ 4298



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 161/322 (50%), Gaps = 23/322 (7%)

Query: 317  IFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
            ++ WG    G+LG GVE A V  P    AL   N   +  GE    AVT  G +Y  G G
Sbjct: 3953 VYGWGHNHRGQLG-GVEGAKVRTPTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATGYG 4011

Query: 376  IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC--GPWHTAAITSAGKLFTFGDGTFG 433
                  +G +  +S      +   ++ + I+ + C  G  H  A+++ G+++++G+G  G
Sbjct: 4012 AGGRLGIGGIDSVSQ---PTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDG 4068

Query: 434  ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
             LGHG+R S   P+ +  L  L+ V  +CG  H+A +             +  +++TWG 
Sbjct: 4069 KLGHGNRVSYDRPKLITALSGLEVVCIACGGAHSACLT------------ARGRIYTWGK 4116

Query: 494  GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQL 551
            G  G+LGHGD+E +++P  V+         VACG   + T+ +T    V+S G  DYG+L
Sbjct: 4117 GRYGRLGHGDSEDQLIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKL 4176

Query: 552  GSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            G  GS G K P RI+  +K   +  + CGS     +     VYTWGKG   +LGHG  E+
Sbjct: 4177 GRGGSEGCKLPMRID-CLKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGHGSYEH 4235

Query: 611  KQTPTLVEALRDKQVKSVVCGS 632
             + P  V  ++ K + S+  GS
Sbjct: 4236 VRRPMRVTGMQGKMIVSIATGS 4257



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 145/287 (50%), Gaps = 27/287 (9%)

Query: 218  DANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEIS 277
            D+ S+ +   S +    + V+ +S G         G+V+ WGEG  +G LG   +G  +S
Sbjct: 4022 DSVSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEG-EDGKLG---HGNRVS 4077

Query: 278  SADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS 337
              DR     PK++ +   L+   IACG  H+  +T +G+I++WG+G  G+LGHG   D  
Sbjct: 4078 Y-DR-----PKLITALSGLEVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSEDQL 4131

Query: 338  YPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRK 395
             PKL++AL+   +  VAC  G+  T  +T   ++++WGDG  + G LG+       +P +
Sbjct: 4132 IPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDG--DYGKLGRGGSEGCKLPMR 4189

Query: 396  VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
            +   ++GL++  + CG   + A+   G ++T+G G +  LGHG       P  V  ++  
Sbjct: 4190 IDC-LKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGHGSYEHVRRPMRVTGMQGK 4248

Query: 456  KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG 502
              V  + G  H  A  +            + +++TWGD  EGQLG G
Sbjct: 4249 MIVSIATGSLHCVACTD------------TGEVYTWGDNDEGQLGDG 4283



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 93/176 (52%), Gaps = 7/176 (3%)

Query: 470  IVEVAGKTSGSNGLS---SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
            I +VA  + G + L+     ++++WG+G +G+LGHG+      P  +     +    +AC
Sbjct: 4038 ITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGHGNRVSYDRPKLITALSGLEVVCIAC 4097

Query: 527  GHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHI 583
            G + +  LTA G++++ G   YG+LG   S  +  P  +E     R I D+ACGS     
Sbjct: 4098 GGAHSACLTARGRIYTWGKGRYGRLGHGDSEDQLIPKLVEALSSFRVI-DVACGSGDAQT 4156

Query: 584  AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
              ++    V++WG G  G+LG G +E  + P  ++ L+  +V  V CGS F+ A+C
Sbjct: 4157 LCITDDDNVWSWGDGDYGKLGRGGSEGCKLPMRIDCLKGLRVIKVECGSQFSVALC 4212



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 103/223 (46%), Gaps = 20/223 (8%)

Query: 423  KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            K+F +G      LG    S   VP     L  L+ V  + G   T  IV   GK      
Sbjct: 3058 KVFVWGLNDKDQLGGVKGSKVKVPVFSPALSALRPVHIAGGS-KTLFIVSHDGK------ 3110

Query: 483  LSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
                 LF  G+G  G+LG G +     PR  P    V   +    V  G    +ALTA G
Sbjct: 3111 -----LFACGEGTNGRLGLGHSNNVSTPRANPYLSHVL--VRRVAVHSGGKHALALTADG 3163

Query: 539  QVFSMGSADYGQLGSPGS-TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
            +V+S G  + G+LG     T + P  IE     R I  IACGS H A V+++  +YTWG 
Sbjct: 3164 KVYSWGEGEDGKLGHGNRITLEAPRLIESLAGERVIS-IACGSAHSACVTARGHLYTWGL 3222

Query: 598  GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            G  G+LGHGD+  +  P +VEAL + +V  V CGS     + L
Sbjct: 3223 GEYGRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTLAL 3265



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 128/300 (42%), Gaps = 44/300 (14%)

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           L    I  +AC E     +T  G +YT          L   +   H +P      +E   
Sbjct: 480 LGSIRIQQIACAEKLALLLTHDGAVYT----------LPYDTMTPHLVP-----GLESKT 524

Query: 405 ISSICCGPW--HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
           I+ + C     H    +S G  +++G G  G LGHGD ++   P+ +  L   + V  + 
Sbjct: 525 ITQVSCHSLGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQPLHHLAHHEVVRVAA 584

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS----DD 518
           G+  +A I             S   L+TWG GA+G+LGHG  E  + P  V  +    + 
Sbjct: 585 GLACSAVIT------------SRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIER 632

Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIAC 578
           I    +  G   T+  T  G V   G    G+ G+P        R    +    +  +  
Sbjct: 633 IIDVALGWGEGSTLCCTWEGAVQVFGE---GEAGTP--------RALSALAMFRVTRVYT 681

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G +  A ++   +VYTWGKG   +LGHG+ E+ + P LVEAL+  ++  +  G++   A+
Sbjct: 682 GEHWHAALTDGGQVYTWGKGDGYRLGHGNMESTKIPKLVEALQGIKIVDLSLGASHGIAL 741



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/124 (37%), Positives = 69/124 (55%), Gaps = 2/124 (1%)

Query: 519  ISFCKVAC--GHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDI 576
            +   KVAC  G    +AL+A G+V+S G  + G+LG          ++   +    +  I
Sbjct: 4036 VFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGHGNRVSYDRPKLITALSGLEVVCI 4095

Query: 577  ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTA 636
            ACG  H A ++++  +YTWGKG  G+LGHGD+E++  P LVEAL   +V  V CGS    
Sbjct: 4096 ACGGAHSACLTARGRIYTWGKGRYGRLGHGDSEDQLIPKLVEALSSFRVIDVACGSGDAQ 4155

Query: 637  AICL 640
             +C+
Sbjct: 4156 TLCI 4159



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 117/284 (41%), Gaps = 44/284 (15%)

Query: 283 DALLPKVLESTVVLDAQSIACGS--KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPK 340
           D + P ++          ++C S  +H +  +  G  +SWG G  G+LGHG  A    P+
Sbjct: 510 DTMTPHLVPGLESKTITQVSCHSLGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQ 569

Query: 341 LIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG---------IHNLGLLGQVSEISHW 391
            +  L    +  VA G   +  +T  G LYTWG G         I N      VS  +H 
Sbjct: 570 PLHHLAHHEVVRVAAGLACSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHN 629

Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
           I R +   +   + S++CC        T  G +  FG+G  G            PR +  
Sbjct: 630 IERIIDVALGWGEGSTLCC--------TWEGAVQVFGEGEAG-----------TPRALSA 670

Query: 452 LKELKTVMASCGV-WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
           L   +      G  WH A        T G       +++TWG G   +LGHG+ E   +P
Sbjct: 671 LAMFRVTRVYTGEHWHAAL-------TDGG------QVYTWGKGDGYRLGHGNMESTKIP 717

Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSP 554
             V+    I    ++ G S  IAL++ G +F  G+ +  Q+ +P
Sbjct: 718 KLVEALQGIKIVDLSLGASHGIALSSEGVLFVWGTHERTQISNP 761



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 123/281 (43%), Gaps = 56/281 (19%)

Query: 241 SQGSCHEDFDGLGDVFI--------WGEGLG-NGLLGGAVNGVEISSADRRDALLPKVLE 291
           +Q SCH     LG  ++        W  G+G +G LG             RDA  P+ L 
Sbjct: 526 TQVSCHS----LGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAA-------RDA--PQPLH 572

Query: 292 STVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH 351
                +   +A G   + ++T +G +++WG G+ G+LGHG   +   P+ + + N  NI 
Sbjct: 573 HLAHHEVVRVAAGLACSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPV-SFNAHNIE 631

Query: 352 MV-----ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
            +       GE  T   T  G +  +G+G                 PR +S  +   +++
Sbjct: 632 RIIDVALGWGEGSTLCCTWEGAVQVFGEGEAG-------------TPRALSA-LAMFRVT 677

Query: 407 SICCGP-WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
            +  G  WH AA+T  G+++T+G G    LGHG+  ST +P+ VE L+ +K V  S G  
Sbjct: 678 RVYTGEHWH-AALTDGGQVYTWGKGDGYRLGHGNMESTKIPKLVEALQGIKIVDLSLGAS 736

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP 506
           H  A+         S G+    LF WG     Q+ +   +P
Sbjct: 737 HGIAL--------SSEGV----LFVWGTHERTQISNPVPQP 765



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 8/126 (6%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+ L +  +     +  G      +T  GQ+++WG+G G +LGHG       PKL++AL 
Sbjct: 665 PRALSALAMFRVTRVYTGEHWHAALTDGGQVYTWGKGDGYRLGHGNMESTKIPKLVEALQ 724

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
           G  I  ++ G  H  A++  G L+ WG          + ++IS+ +P+ V       + +
Sbjct: 725 GIKIVDLSLGASHGIALSSEGVLFVWGT--------HERTQISNPVPQPVKAFNPSFKAN 776

Query: 407 SICCGP 412
            +  GP
Sbjct: 777 GVSSGP 782


>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
 gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            2
 gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
          Length = 4912

 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 189/391 (48%), Gaps = 37/391 (9%)

Query: 255  VFIWG----EGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            V +WG    E LG GL G  V              +P   ++   L    IA GSK   +
Sbjct: 2988 VMVWGLNDKEQLG-GLKGSKVK-------------VPTFSQTISRLRPIHIAGGSKSLFI 3033

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            V++ G++++ GEG+ G+LG GV  +V  P  +  L    +  VA   G  H  A+TL G 
Sbjct: 3034 VSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGK 3093

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +++WG+G    G LG  +  +   PR V   +   +I  + CG  H+AAI+S G+L+T+G
Sbjct: 3094 VFSWGEG--EDGKLGHGNRTTLDKPRLVEA-LRAKKIRDVACGSSHSAAISSQGELYTWG 3150

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV--WHTAAIVEVAGKTSGSNGLSSK 486
             G +G LGHGD ++   P+ V  L   + V  +CG     T A+ E              
Sbjct: 3151 LGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTE------------DG 3198

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +F+WGDG  G+LG G +E    P  ++    I   ++ CG   ++ALT  G+V++ G  
Sbjct: 3199 AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKG 3258

Query: 547  DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            DY +LG  G       +  G ++ R +  +A G+ H   V+   +VY WG   +GQ G G
Sbjct: 3259 DYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 3318

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            +    + P LV  L    V  V CGS+ + A
Sbjct: 3319 NTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3349



 Score =  167 bits (423), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 128/394 (32%), Positives = 194/394 (49%), Gaps = 29/394 (7%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            + G   ++ WG     G LGG + G  I +        P   E+  +L    +A G +  
Sbjct: 4045 WGGASTIYGWGHN-HRGQLGG-LEGSRIKT--------PTPCEALSLLRPVQLAGGEQSL 4094

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT  G++F+ G GSGG+LG G     + P L+ +L    +  VA   G  H  A+T  
Sbjct: 4095 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 4154

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G++Y WG+G    G LG  + +S+  P+ V   + G+ ++ I CG  H+AAIT++G + T
Sbjct: 4155 GEVYAWGEG--EDGKLGHGNRMSYDRPKLVE-HLNGMSVADIACGSAHSAAITASGHVLT 4211

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+ VE L   + +  +CG          +G           
Sbjct: 4212 WGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG----------SGDAQTLCITDDD 4261

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   +P  ++    +   KV CG   ++ALT +G V++ G  
Sbjct: 4262 NVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKG 4321

Query: 547  DYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
            D+ +LG  GS    + P ++   ++ + I  IA GS H    S   EVYTWG    GQLG
Sbjct: 4322 DFHRLGH-GSVDHVRRPKKVAA-LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG 4379

Query: 605  HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G     Q P LV AL+ K +  V CGS  T A+
Sbjct: 4380 DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4413



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 149/307 (48%), Gaps = 19/307 (6%)

Query: 286  LPKVLEST--VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLID 343
            +P +L S   V +   ++  G KH + +T +G++++WGEG  GKLGHG       PKL++
Sbjct: 4124 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 4183

Query: 344  ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
             LNG ++  +ACG  H+ A+T SG + TWG G +  G LG         P+ V   + G 
Sbjct: 4184 HLNGMSVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEALL-GY 4240

Query: 404  QISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
            +   I CG     T  IT    ++++GDG +G LG G      +P ++E+L  L  V   
Sbjct: 4241 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVE 4300

Query: 462  CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
            CG   + A+ +            S  ++TWG G   +LGHG  +    P  V        
Sbjct: 4301 CGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4348

Query: 522  CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
              +A G    +A + +G+V++ G  D GQLG    T     R+   ++ ++I  + CGS 
Sbjct: 4349 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4408

Query: 582  HIAVVSS 588
            H   +S+
Sbjct: 4409 HTLALST 4415



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 144/287 (50%), Gaps = 27/287 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G+V+ WGEG  +G LG   +G  +S  DR     PK++E    +    IACGS H+  +T
Sbjct: 4155 GEVYAWGEG-EDGKLG---HGNRMSY-DR-----PKLVEHLNGMSVADIACGSAHSAAIT 4204

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
              G + +WG+G  G+LGHG   D   PKL++AL G     +ACG  +  T  +T   +++
Sbjct: 4205 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4264

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+       +P K+   + GL +  + CG   + A+T +G ++T+G G
Sbjct: 4265 SWGDG--DYGKLGRGGSDGCKLPYKIES-LAGLGVVKVECGSQFSVALTKSGAVYTWGKG 4321

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             F  LGHG       P++V  L+  K +  + G  H  A  +            S +++T
Sbjct: 4322 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSD------------SGEVYT 4369

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
            WGD  EGQLG G       P  V         KV CG + T+AL+ +
Sbjct: 4370 WGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4416



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 135/287 (47%), Gaps = 35/287 (12%)

Query: 349 NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSI 408
            I  VAC E     ++  G LYTW         L  + E++H +   ++G  EG      
Sbjct: 573 QIKQVACCETQMLILSQEGKLYTWRLAKPEAEPL-PMEEVAHDVFISIAGHCEGR----- 626

Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTA 468
                H  AI S    +++G G    LGHGD  + +VP ++  L++       CG  ++A
Sbjct: 627 -----HFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSA 681

Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP-LCVKVSDDISF-CKVAC 526
           AI      T G N      L TWG G   +LGHG+++ R +P L V +SD +     +  
Sbjct: 682 AI------TCGGN------LLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGS 729

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAV 585
           G + ++ALT+ G VF+ G  DYG+LG+    G   P  +E   +   ++ +  GS     
Sbjct: 730 GDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPR---VQRVFAGSQFSVA 786

Query: 586 VSSKSEVYTWGKGANGQLGHGDNENK----QTPTLVEALRDKQVKSV 628
           +SS+ ++YTWGK     LGH   E        P LV +L+ K++  V
Sbjct: 787 LSSEGQLYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVDV 831



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 156/325 (48%), Gaps = 30/325 (9%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + +AC     ++++++G++++W           +E +V++   I ++ G       C   
Sbjct: 575 KQVACCETQMLILSQEGKLYTWRLAKPEAEPLPME-EVAHDVFI-SIAGH------CEGR 626

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
           H  A+  + + Y+WG G  +   LG     +  +P K++  +E   + S+ CG  ++AAI
Sbjct: 627 HFLAIDSNHNAYSWGTGEDHR--LGHGDTHARAVPTKIAA-LEQHCVQSVYCGCSYSAAI 683

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           T  G L T+G GT+  LGHG+    S+P  V  L +           H    V +    +
Sbjct: 684 TCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSD-----------HMVVDVALGSGDA 732

Query: 479 GSNGLSSKKL-FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
            S  L+S+ L F WGDG  G+LG+G+    + P+ V+    +   +V  G   ++AL++ 
Sbjct: 733 HSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ--RVFAGSQFSVALSSE 790

Query: 538 GQVFSMGSADY--GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
           GQ+++ G A     QL      G    R+  +++H+ I D+A    H   +SS  EV+ W
Sbjct: 791 GQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGW 850

Query: 596 GKGANGQLGHGDNENK---QTPTLV 617
           G+  + Q+      ++   +TP LV
Sbjct: 851 GRNDSQQICPASVSSEPLLRTPILV 875



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 83/156 (53%), Gaps = 2/156 (1%)

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATGQVFSMG 544
            K++  G+G  G+LG G      +P  + V       KVA   G    +ALT  G+VFS G
Sbjct: 3039 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWG 3098

Query: 545  SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
              + G+LG    T     R+   ++ + I D+ACGS H A +SS+ E+YTWG G  G+LG
Sbjct: 3099 EGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLG 3158

Query: 605  HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            HGDN  +  P LV AL  ++V  V CGS     + L
Sbjct: 3159 HGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLAL 3194



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 9/175 (5%)

Query: 470 IVEVAGKTSGSNGL---SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
            + +AG   G + L   S+   ++WG G + +LGHGD   R VP  +   +      V C
Sbjct: 616 FISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYC 675

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS--YHI 583
           G S + A+T  G + + G   Y +LG   S  +  PT +     H  + D+A GS   H 
Sbjct: 676 GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVV-DVALGSGDAHS 734

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             ++S+  V+ WG G  G+LG+G+      P LVE+L   +V+ V  GS F+ A+
Sbjct: 735 LALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL--PRVQRVFAGSQFSVAL 787



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            A  ++ +G    G LG  + S    P   E L  L+ V  + G     A+          
Sbjct: 4048 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT--------- 4098

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
                  KLF  G G+ G+LG G ++   +P  +     +   KVA   G    +ALT  G
Sbjct: 4099 ---PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4155

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V++ G  + G+LG          ++  ++    + DIACGS H A +++   V TWGKG
Sbjct: 4156 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKG 4215

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++  P LVEAL   +   + CGS     +C+
Sbjct: 4216 RYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCI 4257



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 82/157 (52%), Gaps = 14/157 (8%)

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA--CGHSITIALTATGQVFSMG 544
           KL+TW      +L   +AEP  +P+  +V+ D+ F  +A  C     +A+ +    +S G
Sbjct: 592 KLYTW------RLAKPEAEP--LPM-EEVAHDV-FISIAGHCEGRHFLAIDSNHNAYSWG 641

Query: 545 SADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           + +  +LG   +  +  PT+I    +H  ++ + CG  + A ++    + TWG+G   +L
Sbjct: 642 TGEDHRLGHGDTHARAVPTKIAALEQH-CVQSVYCGCSYSAAITCGGNLLTWGRGTYARL 700

Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           GHG+++++  PTLV AL D  V  V  GS    ++ L
Sbjct: 701 GHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLAL 737



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 12/118 (10%)

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIA--CGS 580
           +VAC  +  + L+  G++++       +L  P +    P  +E  + H     IA  C  
Sbjct: 576 QVACCETQMLILSQEGKLYTW------RLAKPEAE---PLPME-EVAHDVFISIAGHCEG 625

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            H   + S    Y+WG G + +LGHGD   +  PT + AL    V+SV CG +++AAI
Sbjct: 626 RHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAI 683



 Score = 47.0 bits (110), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 47/102 (46%), Gaps = 2/102 (1%)

Query: 540  VFSMGSADYGQLGS-PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            V   G  D  QLG   GS  K PT  +   + R I  IA GS  + +VS   +VY  G+G
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIH-IAGGSKSLFIVSQDGKVYACGEG 3046

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
             NG+LG G   N   P  +  LR   VK V   S    A+ L
Sbjct: 3047 TNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALAL 3088


>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
 gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
          Length = 4947

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 128/395 (32%), Positives = 199/395 (50%), Gaps = 39/395 (9%)

Query: 255  VFIWG----EGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            V +WG    E LG GL G  V              LP        L    IA GSK   +
Sbjct: 3030 VLVWGLNDKEQLG-GLKGSKVK-------------LPTYSSVLSQLKPIHIAGGSKSLFI 3075

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            V++ G++++ GEG+ G+LG G   +V  PK +  L+   +  VA   G  H  A+TL G 
Sbjct: 3076 VSQDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGK 3135

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +++WG+G    G LG  + ++   P+ +   +   +I  I CG  H+AAITS+G+L+T+G
Sbjct: 3136 VFSWGEG--EDGKLGHGNRLTLEKPKLIE-TLRTKRIRDIACGSSHSAAITSSGELYTWG 3192

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV--WHTAAIVEVAGKTSGSNGLSSK 486
             G +G LGHGD  +   P+ V  L++ + V  +CG     T  + E        +GL   
Sbjct: 3193 LGEYGRLGHGDNCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTE--------DGL--- 3241

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +F+WGDG  G+LG G +E   +P  V   + +   ++ CG   ++ALT  G+V++ G  
Sbjct: 3242 -VFSWGDGDFGKLGRGGSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKG 3300

Query: 547  DYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
            DY +LG       + PT I+G ++ + +  +A G+ H   V+   +VY WG   +GQ G 
Sbjct: 3301 DYYRLGHGTDQHVRKPTPIQG-LRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGS 3359

Query: 606  GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            G+    + P+LV  L    V  V CGS+ + A  L
Sbjct: 3360 GNTIVNKKPSLVLGLDGIFVNRVACGSSHSVAWSL 3394



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 199/398 (50%), Gaps = 29/398 (7%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            + G   +F WG     G LGG ++G  I +        P   E+  +L    IA G +  
Sbjct: 4085 WGGASTIFGWGHN-HRGQLGG-LDGSRIKN--------PTPCEALSLLRPIQIAGGEQTL 4134

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT  G++++ G G+GG+LG G    V+ P L+++L    I  VA   G  H  A++  
Sbjct: 4135 YAVTPDGKLYATGYGAGGRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSD 4194

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G++++WG+G    G LG  +  S+  P+ +   + G+ +  I CG  H+A IT  G + T
Sbjct: 4195 GEVFSWGEG--EDGKLGHGNRDSYDRPKLIE-SLSGIGVVDIACGSAHSACITIQGHVLT 4251

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+ VE L   + +  +CG          +G           
Sbjct: 4252 WGKGRYGRLGHGDSEDQLQPKLVEALLGYRAIDIACG----------SGDAQTLCITDDD 4301

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   VP+ ++    +   KV CG   ++ALT +G V++ G  
Sbjct: 4302 NVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKG 4361

Query: 547  DYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
            DY +LG  G+T   + P ++   ++ + I  IA GS H    S   EV+TWG    GQLG
Sbjct: 4362 DYHRLGH-GNTDHVRRPKKVAA-LQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLG 4419

Query: 605  HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHK 642
             G     Q P LV++L+ K +  V+CGS  T A+  ++
Sbjct: 4420 DGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALSTYQ 4457



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 157/320 (49%), Gaps = 27/320 (8%)

Query: 218  DANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEIS 277
            D+ +  +  +S +  +   V+ +S G         G+VF WGEG  +G LG         
Sbjct: 4160 DSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEG-EDGKLGHGNR----D 4214

Query: 278  SADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS 337
            S DR     PK++ES   +    IACGS H+  +T QG + +WG+G  G+LGHG   D  
Sbjct: 4215 SYDR-----PKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGDSEDQL 4269

Query: 338  YPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRK 395
             PKL++AL G     +AC  G+  T  +T   ++++WGDG  + G LG+       +P K
Sbjct: 4270 QPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDG--DYGKLGRGGSDGCKVPMK 4327

Query: 396  VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
            +   + GL ++ + CG   + A+T +G ++T+G G +  LGHG+      P++V  L+  
Sbjct: 4328 IE-SLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGK 4386

Query: 456  KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
            K +  + G  H  A  +              ++FTWGD  EGQLG G       P  V+ 
Sbjct: 4387 KIISIATGSLHCVACSDAG------------EVFTWGDNDEGQLGDGTVSAIQRPRLVQS 4434

Query: 516  SDDISFCKVACGHSITIALT 535
                   KV CG + T+AL+
Sbjct: 4435 LQGKHIVKVICGSAHTLALS 4454



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 140/266 (52%), Gaps = 19/266 (7%)

Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
           K LE T+V  A    C  +H + +   G ++SWG G GG+LGHG  +    P  I AL  
Sbjct: 603 KGLECTIVQLAAH--CEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALAD 660

Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG-QMEGLQIS 406
             +  V CG  ++ A+T SG+LYTWG G +  G LG  +    ++P  V+  +   +   
Sbjct: 661 RQVTGVFCGSSYSAAITASGELYTWGRGTY--GRLGHGNSEDKYVPTLVTALKAHRVVHV 718

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
           ++ CG  H+  +T AG  F +GDG FG LG+     TSVP +V+  +      ASC    
Sbjct: 719 ALGCGDAHSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVPVQVDLPQ------ASC---- 768

Query: 467 TAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
              +V+V   +  S  L+ +  ++TWG G  G+LGHG++E   VP  V+  +      +A
Sbjct: 769 ---VVKVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDLA 825

Query: 526 CGHSITIALTATGQVFSMGSADYGQL 551
            G +  +ALTA+G+++  G  D+ Q+
Sbjct: 826 VGLAHCLALTASGELYGWGRNDFQQI 851



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 155/322 (48%), Gaps = 30/322 (9%)

Query: 283 DALLPKVLESTV--VLD-AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSY 338
           D  +P+   +T+  +LD  + I C      ++T  G +          L H +   + +Y
Sbjct: 547 DGAMPRYSTATIDLLLDQVRQIVCAENCVYILTDSGTVL--------YLSHAISMTEDNY 598

Query: 339 PKLIDALNGSNIHMVA-CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
           P  +  L  + + + A C   H  A+  SGD+Y+WG G  + G LG     +  +P +++
Sbjct: 599 PAQVKGLECTIVQLAAHCEGRHVLALASSGDVYSWGSG--DGGRLGHGDTSAKELPTRIA 656

Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
             +   Q++ + CG  ++AAIT++G+L+T+G GT+G LGHG+     VP  V  LK  + 
Sbjct: 657 A-LADRQVTGVFCGSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRV 715

Query: 458 VMAS--CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
           V  +  CG  H+  + E         GL+    F WGDG  G+LG+       VP+ V +
Sbjct: 716 VHVALGCGDAHSLCVTEA--------GLA----FAWGDGDFGKLGNESCVGTSVPVQVDL 763

Query: 516 SDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIED 575
                  KV  G   ++ALT  G V++ G    G+LG   S      ++   ++ + I D
Sbjct: 764 PQASCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVD 823

Query: 576 IACGSYHIAVVSSKSEVYTWGK 597
           +A G  H   +++  E+Y WG+
Sbjct: 824 LAVGLAHCLALTASGELYGWGR 845



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 135/260 (51%), Gaps = 25/260 (9%)

Query: 383 GQVSEISHWI-------PRKVSG-QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
           G V  +SH I       P +V G +   +Q+++ C G  H  A+ S+G ++++G G  G 
Sbjct: 582 GTVLYLSHAISMTEDNYPAQVKGLECTIVQLAAHCEGR-HVLALASSGDVYSWGSGDGGR 640

Query: 435 LGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG 494
           LGHGD S+  +P  +  L + +     CG  ++AAI             +S +L+TWG G
Sbjct: 641 LGHGDTSAKELPTRIAALADRQVTGVFCGSSYSAAIT------------ASGELYTWGRG 688

Query: 495 AEGQLGHGDAEPRVVPLCVKV--SDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
             G+LGHG++E + VP  V    +  +    + CG + ++ +T  G  F+ G  D+G+LG
Sbjct: 689 TYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAWGDGDFGKLG 748

Query: 553 SPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
           +    G   P +++   +   +  +  GS     ++ +  VYTWGKG  G+LGHG++E+ 
Sbjct: 749 NESCVGTSVPVQVDLP-QASCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHS 807

Query: 612 QTPTLVEALRDKQVKSVVCG 631
             P +V+AL  K++  +  G
Sbjct: 808 PVPKMVQALEGKKIVDLAVG 827



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 115/242 (47%), Gaps = 27/242 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           GDV+ WG G G  L  G  +  E          LP  + +        + CGS ++  +T
Sbjct: 628 GDVYSWGSGDGGRLGHGDTSAKE----------LPTRIAALADRQVTGVFCGSSYSAAIT 677

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA--CGEFHTCAVTLSGDLY 370
             G++++WG G+ G+LGHG   D   P L+ AL    +  VA  CG+ H+  VT +G  +
Sbjct: 678 ASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAF 737

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            WGDG  + G LG  S +   +P +V        +  +  G   + A+T  G ++T+G G
Sbjct: 738 AWGDG--DFGKLGNESCVGTSVPVQVDLPQASC-VVKVFSGSQFSVALTREGTVYTWGKG 794

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             G LGHG+   + VP+ V+ L+  K V  + G+ H  A+             +S +L+ 
Sbjct: 795 HGGRLGHGNSEHSPVPKMVQALEGKKIVDLAVGLAHCLALT------------ASGELYG 842

Query: 491 WG 492
           WG
Sbjct: 843 WG 844



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/174 (31%), Positives = 85/174 (48%), Gaps = 5/174 (2%)

Query: 470 IVEVAGKTSGSNGL---SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           IV++A    G + L   SS  +++WG G  G+LGHGD   + +P  +    D     V C
Sbjct: 609 IVQLAAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFC 668

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIE-DIACGSYHIA 584
           G S + A+TA+G++++ G   YG+LG   S  K+ PT +     HR +   + CG  H  
Sbjct: 669 GSSYSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSL 728

Query: 585 VVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            V+     + WG G  G+LG+        P  V+  +   V  V  GS F+ A+
Sbjct: 729 CVTEAGLAFAWGDGDFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVAL 782



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/111 (39%), Positives = 69/111 (62%), Gaps = 2/111 (1%)

Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
            +AL ++G V+S GS D G+LG   ++ K  PTRI   +  R +  + CGS + A +++ 
Sbjct: 621 VLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAA-LADRQVTGVFCGSSYSAAITAS 679

Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            E+YTWG+G  G+LGHG++E+K  PTLV AL+  +V  V  G     ++C+
Sbjct: 680 GELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCV 730



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 8/117 (6%)

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIA-CGSY 581
           ++ C  +    LT +G V  +  A         +   +P +++G ++   ++  A C   
Sbjct: 567 QIVCAENCVYILTDSGTVLYLSHA------ISMTEDNYPAQVKG-LECTIVQLAAHCEGR 619

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           H+  ++S  +VY+WG G  G+LGHGD   K+ PT + AL D+QV  V CGS+++AAI
Sbjct: 620 HVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGSSYSAAI 676



 Score = 46.6 bits (109), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 48/103 (46%), Gaps = 2/103 (1%)

Query: 539  QVFSMGSADYGQLGS-PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
            +V   G  D  QLG   GS  K PT      + + I  IA GS  + +VS   ++Y  G+
Sbjct: 3029 KVLVWGLNDKEQLGGLKGSKVKLPTYSSVLSQLKPIH-IAGGSKSLFIVSQDGKLYACGE 3087

Query: 598  GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            G NG+LG G N N  TP  V  L    VK V   S    A+ L
Sbjct: 3088 GTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMAL 3130


>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 372

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 181/348 (52%), Gaps = 18/348 (5%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQG-QIFSWGEGSGGKLGHGVE 333
           ++   D  D   P  L +       S+ CG+ H V  ++ G +++SWG G  G+LGHG  
Sbjct: 37  QLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGXEVYSWGWGDFGRLGHGNS 96

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +D+  P  I AL+G  I  +ACG+ H  AVT  G++ +WG   +  G LG        +P
Sbjct: 97  SDLFTPLPIKALHGIRIKQIACGDSHCLAVTXEGEVQSWGR--NQNGQLGLGDTEDSLVP 154

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           +K+    EG++I  +  G  HTAA+T  G L+ +G G +G LG GDR+   VP  V +  
Sbjct: 155 QKIQ-AFEGIRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTG 213

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
             K    +CG  HT ++              S  L+T+G    GQLGHGD E  ++P  +
Sbjct: 214 GEKXSXVACGWRHTISVS------------YSGALYTYGWSKYGQLGHGDLEDHLIPHKL 261

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRY 572
           +   +    +++ G   T ALT+ G+++  G   +GQ+G   +  +  P ++      + 
Sbjct: 262 EALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 321

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           ++ ++CG  H   V+ ++ V+ WG+G NGQLG G++ ++  P ++EAL
Sbjct: 322 VQ-VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 368



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 172/340 (50%), Gaps = 18/340 (5%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+ G+ H+V +     + SWG G  G+LGHG   D   P  + AL+G  I  V CG  HT
Sbjct: 11  ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 70

Query: 361 CAVTLSG-DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
            A + SG ++Y+WG G  + G LG  +    + P  +   + G++I  I CG  H  A+T
Sbjct: 71  VAYSQSGXEVYSWGWG--DFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCLAVT 127

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G++ ++G    G LG GD   + VP++++  + ++    + G  HTAA+ E       
Sbjct: 128 XEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTE------- 180

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                   L+ WG G  G LG GD   R+VP  V  +       VACG   TI+++ +G 
Sbjct: 181 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKXSXVACGWRHTISVSYSGA 235

Query: 540 VFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           +++ G + YGQLG         P ++E  + + +I  I+ G+ H   ++S  ++Y WG  
Sbjct: 236 LYTYGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGARHTXALTSDGKLYGWGWN 294

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             GQ+G G+N ++ +P  V    D++V  V CG   T A+
Sbjct: 295 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 334



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 96/187 (51%), Gaps = 19/187 (10%)

Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
           K ++ S G  H+ A+            LS   + +WG G +GQLGHGDAE R  P  +  
Sbjct: 7   KVLIISAGASHSVAL------------LSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA 54

Query: 516 SDDISFCKVACGHSITIALTATG-QVFSMGSADYGQLGSPGSTGKF---PTRIEGNIKHR 571
            D      V CG   T+A + +G +V+S G  D+G+LG   S+  F   P +    I+  
Sbjct: 55  LDGHQIVSVTCGADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR-- 112

Query: 572 YIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
            I+ IACG  H   V+ + EV +WG+  NGQLG GD E+   P  ++A    ++K V  G
Sbjct: 113 -IKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKXVAAG 171

Query: 632 SNFTAAI 638
           +  TAA+
Sbjct: 172 AEHTAAV 178



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 19/46 (41%), Positives = 34/46 (73%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           ++CG +H + VT++  +F+WG G+ G+LG G   D ++PK+I+AL+
Sbjct: 324 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 369


>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
 gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
          Length = 4933

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 127/392 (32%), Positives = 192/392 (48%), Gaps = 39/392 (9%)

Query: 255  VFIWG----EGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            V +WG    E LG GL G  V              +P   ++   L    IA GSK   +
Sbjct: 2914 VMVWGLNDKEQLG-GLKGSKVK-------------VPTFSQTISRLRPIHIAGGSKSLFV 2959

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            V++ G++F+ GEG+ G+LG GV  +V  P  +  L+   +  VA   G  H  A+TL G 
Sbjct: 2960 VSQDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGK 3019

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +++WG+G    G LG  +  +   PR V   +   +I  I CG  H+AAI+S G+L+T+G
Sbjct: 3020 VFSWGEG--EDGKLGHGNRTTLDKPRLVEA-LRAKKIRDIACGSSHSAAISSQGELYTWG 3076

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV--WHTAAIVEVAGKTSGSNGLSSK 486
             G +G LGHGD ++   P+ V  L   + +  +CG     T A+ E              
Sbjct: 3077 LGEYGRLGHGDNATQLKPKLVTALCGSRVIQVACGSRDAQTLALTE------------DG 3124

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +F+WGDG  G+LG G +E    P  ++    I   ++ CG   ++ALT  G+V++ G  
Sbjct: 3125 AVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKG 3184

Query: 547  DYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
            DY +LG  G    + P  I G ++ R +  +A G+ H   V+   +VY WG   +GQ G 
Sbjct: 3185 DYYRLGHGGDQHVRKPQPIAG-LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGS 3243

Query: 606  GDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            G+    + P LV  L    V  V CGS+ + A
Sbjct: 3244 GNTFVNKKPALVIGLDAVFVNRVACGSSHSMA 3275



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 129/394 (32%), Positives = 194/394 (49%), Gaps = 29/394 (7%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            + G   ++ WG     G LGG + G  I +        P   E+  +L    +A G +  
Sbjct: 4066 WGGASTIYGWGHN-HRGQLGG-LEGSRIKT--------PTPCEALSLLRPVQLAGGEQSL 4115

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT  G++F+ G GSGG+LG G     S P L+ +L    +  VA   G  H  A+T  
Sbjct: 4116 FAVTPDGKLFATGYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTTD 4175

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G++Y WG+G    G LG  + +S+  P K+   + G+ ++ I CG  H+AAIT++G + T
Sbjct: 4176 GEVYAWGEG--EDGKLGHGNRLSYDRP-KLLEHLNGMSVADIACGSAHSAAITASGHVLT 4232

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+ VE L   + +  +CG          +G           
Sbjct: 4233 WGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG----------SGDAQTLCITDDD 4282

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   +P  ++    +   KV CG   ++ALT +G V++ G  
Sbjct: 4283 NVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4342

Query: 547  DYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
            D+ +LG  GS    + P ++   ++ + I  IA GS H    S   EVYTWG    GQLG
Sbjct: 4343 DFHRLGH-GSVDHVRRPKKVAA-LQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLG 4400

Query: 605  HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G     Q P LV AL+ K +  V CGS  T A+
Sbjct: 4401 DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4434



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 147/307 (47%), Gaps = 19/307 (6%)

Query: 286  LPKVLEST--VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLID 343
            +P +L S   V +   ++  G KH + +T  G++++WGEG  GKLGHG       PKL++
Sbjct: 4145 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRLSYDRPKLLE 4204

Query: 344  ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
             LNG ++  +ACG  H+ A+T SG + TWG G +  G LG         P+ V   + G 
Sbjct: 4205 HLNGMSVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEALL-GY 4261

Query: 404  QISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
            +   I CG     T  IT    ++++GDG +G LG G      +P ++E+L  L  +   
Sbjct: 4262 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 4321

Query: 462  CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
            CG   + A+ +            S  ++TWG G   +LGHG  +    P  V        
Sbjct: 4322 CGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4369

Query: 522  CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
              +A G    +A +  G+V++ G  D GQLG    T     R+   ++ ++I  + CGS 
Sbjct: 4370 ISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4429

Query: 582  HIAVVSS 588
            H   +S+
Sbjct: 4430 HTLALST 4436



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 143/287 (49%), Gaps = 27/287 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G+V+ WGEG  +G LG   +G  +S  DR     PK+LE    +    IACGS H+  +T
Sbjct: 4176 GEVYAWGEG-EDGKLG---HGNRLSY-DR-----PKLLEHLNGMSVADIACGSAHSAAIT 4225

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
              G + +WG+G  G+LGHG   D   PKL++AL G     +ACG  +  T  +T   +++
Sbjct: 4226 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4285

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+       +P K+   + GL +  + CG   + A+T +G ++T+G G
Sbjct: 4286 SWGDG--DYGKLGRGGSDGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4342

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             F  LGHG       P++V  L+  K +  + G  H  A  +              +++T
Sbjct: 4343 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAG------------EVYT 4390

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
            WGD  EGQLG G       P  V         KV CG + T+AL+ +
Sbjct: 4391 WGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4437



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 148/313 (47%), Gaps = 36/313 (11%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA---- 354
           + +AC     +L++K+G++++W         H  + D   P+ +D  +  +   ++    
Sbjct: 598 KQVACSKDIVLLLSKEGKLYNW---------HISKPDTE-PQPLDFGDIGSETFISIASH 647

Query: 355 CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
           C   H  AV  + + Y+WG G +    LG     S  +P K+   +   ++ S+ CG  +
Sbjct: 648 CEGRHFLAVDNNFNAYSWGTGDNRR--LGHGDCHSRELPTKIESLVR--RVKSVYCGCSY 703

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV--WHTAAIVE 472
           +AAIT  G L+T+G G +G LGHG      +P  V  LK+ + V  + G    HT  +  
Sbjct: 704 SAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLT- 762

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
                  + GL    ++ WGDG  G+LG+      + PL ++    +   +V  G   ++
Sbjct: 763 -------NEGL----VYAWGDGDYGKLGNASCNSSLQPLLIECLPRVQ--RVFAGSQFSL 809

Query: 533 ALTATGQVFSMGSADY--GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           ALT  GQ++S G A     QL      G    R+  +++H+ I D+A G  H   +SS  
Sbjct: 810 ALTGEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVDVAVGVTHCLALSSAG 869

Query: 591 EVYTWGKGANGQL 603
           E++ WG+  N Q+
Sbjct: 870 EIFGWGRNDNQQI 882



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/156 (39%), Positives = 82/156 (52%), Gaps = 2/156 (1%)

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATGQVFSMG 544
            K+F  G+G  G+LG G      +P  + V       KVA   G    +ALT  G+VFS G
Sbjct: 2965 KVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWG 3024

Query: 545  SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
              + G+LG    T     R+   ++ + I DIACGS H A +SS+ E+YTWG G  G+LG
Sbjct: 3025 EGEDGKLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLG 3084

Query: 605  HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            HGDN  +  P LV AL   +V  V CGS     + L
Sbjct: 3085 HGDNATQLKPKLVTALCGSRVIQVACGSRDAQTLAL 3120



 Score = 87.0 bits (214), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 107/214 (50%), Gaps = 28/214 (13%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
           LP  +ES +V   +S+ CG  ++  +T +G +++WG G+ G+LGHG+  D   P ++ AL
Sbjct: 683 LPTKIES-LVRRVKSVYCGCSYSAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMAL 741

Query: 346 NGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
               +  VA   G+ HT  +T  G +Y WGDG  + G LG  S  S   P  +    E L
Sbjct: 742 KDHQVVDVALGSGDAHTLCLTNEGLVYAWGDG--DYGKLGNASCNSSLQPLLI----ECL 795

Query: 404 -QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG----DRSSTSVPREVETLKELKTV 458
            ++  +  G   + A+T  G+L+++G  +   LGH     +    SVPR + +L+  + V
Sbjct: 796 PRVQRVFAGSQFSLALTGEGQLYSWGKAS--CLGHQLVERNVQGCSVPRLITSLQHKRIV 853

Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
             + GV H  A+             S+ ++F WG
Sbjct: 854 DVAVGVTHCLALS------------SAGEIFGWG 875



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            A  ++ +G    G LG  + S    P   E L  L+ V  + G     A+          
Sbjct: 4069 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT--------- 4119

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
                  KLF  G G+ G+LG G ++   +P  +     +   KVA   G    +ALT  G
Sbjct: 4120 ---PDGKLFATGYGSGGRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDG 4176

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V++ G  + G+LG          ++  ++    + DIACGS H A +++   V TWGKG
Sbjct: 4177 EVYAWGEGEDGKLGHGNRLSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKG 4236

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++  P LVEAL   +   + CGS     +C+
Sbjct: 4237 RYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCI 4278



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 9/154 (5%)

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK-VACGHSITIALTATGQVFSMGSAD 547
           ++WG G   +LGHGD   R +P   K+   +   K V CG S + A+T  G +++ G  +
Sbjct: 663 YSWGTGDNRRLGHGDCHSRELP--TKIESLVRRVKSVYCGCSYSAAITLRGNLYTWGRGN 720

Query: 548 YGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGANGQLG 604
           YG+LG   S  +  PT +     H+ + D+A GS   H   ++++  VY WG G  G+LG
Sbjct: 721 YGRLGHGISDDQCLPTMVMALKDHQVV-DVALGSGDAHTLCLTNEGLVYAWGDGDYGKLG 779

Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +    +   P L+E L   +V+ V  GS F+ A+
Sbjct: 780 NASCNSSLQPLLIECL--PRVQRVFAGSQFSLAL 811



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 13/157 (8%)

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA--CGHSITIALTATGQVFSMG 544
           KL+ W       +   D EP+  PL        +F  +A  C     +A+      +S G
Sbjct: 615 KLYNW------HISKPDTEPQ--PLDFGDIGSETFISIASHCEGRHFLAVDNNFNAYSWG 666

Query: 545 SADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           + D  +LG      +  PT+IE  +  R ++ + CG  + A ++ +  +YTWG+G  G+L
Sbjct: 667 TGDNRRLGHGDCHSRELPTKIESLV--RRVKSVYCGCSYSAAITLRGNLYTWGRGNYGRL 724

Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           GHG ++++  PT+V AL+D QV  V  GS     +CL
Sbjct: 725 GHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCL 761



 Score = 43.5 bits (101), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 2/102 (1%)

Query: 540  VFSMGSADYGQLGS-PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            V   G  D  QLG   GS  K PT  +   + R I  IA GS  + VVS   +V+  G+G
Sbjct: 2914 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIH-IAGGSKSLFVVSQDGKVFACGEG 2972

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
             NG+LG G   N   P  +  L    VK V   S    A+ L
Sbjct: 2973 TNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL 3014


>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
          Length = 4409

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 195/389 (50%), Gaps = 45/389 (11%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3536 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 3582

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 3583 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 3642

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      PR++   ++G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 3643 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 3699

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V           +CG+ HT A+        GS       ++ 
Sbjct: 3700 DYGRLGLGNTSNKKLPERV-----------ACGLNHTLAV-----SADGS------MVWA 3737

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  V V   I   KVACG   ++ALT  G V++ G      
Sbjct: 3738 FGDGDYGKLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 3795

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 3796 IGLPEGRARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDVYAWGSNSEGQLGLGHT 3855

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 3856 NHVREPTLVTVLQGKNVRQISAGRCHSAA 3884



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 371 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVIST 418

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 419 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 478

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 479 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 536

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 537 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 583

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 584 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 643

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE  +    I DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 644 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 702

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 703 PITKPKKVSGLDGIAIQQISAGTSHSLA 730



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 154/329 (46%), Gaps = 39/329 (11%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3537 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 3590

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 3591 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 3647

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      PR++E L+  + V  SCG  H+A +             S  KLFT
Sbjct: 3648 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 3695

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P            +VACG + T+A++A G  V++ G  DYG
Sbjct: 3696 FGNGDYGRLGLGNTSNKKLPE-----------RVACGLNHTLAVSADGSMVWAFGDGDYG 3744

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            +LG   ST K   +    +    I+ +ACG+     ++    VYT+G+     L  G   
Sbjct: 3745 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR 3804

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            N   P  V  L    ++ V  G+  T A+
Sbjct: 3805 NHNRPQQVPVLAGVVIEDVAVGAEHTLAL 3833



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 136/277 (49%), Gaps = 37/277 (13%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      +P       +  Q+    CG   T  I + G + 
Sbjct: 3536 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFSQAQQV---ICGQNCTFVIQANGTVL 3587

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 3588 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 3637

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        +++CG   +  +T+ G++F+
Sbjct: 3638 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 3695

Query: 543  MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANG 601
             G+ DYG+LG   ++ K           +  E +ACG  H +AV +  S V+ +G G  G
Sbjct: 3696 FGNGDYGRLGLGNTSNK-----------KLPERVACGLNHTLAVSADGSMVWAFGDGDYG 3744

Query: 602  QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            +LG G++  K +P  V+ L    +K V CG+ F+ A+
Sbjct: 3745 KLGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVAL 3781



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 434 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 491

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 492 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 540

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 541 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 597

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 598 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 654

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 655 KLIEELAATRIVDISIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 702

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 703 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 733



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 405 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 464

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 465 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 512

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 513 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 568

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 569 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 628

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 629 STGQVYAWGCGACLGC 644



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   V+ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 3814 VLAGVVIED---VAVGAEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGK 3870

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 3871 NVRQISAGRCHSAAWT 3886


>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
 gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
          Length = 5077

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 130/401 (32%), Positives = 193/401 (48%), Gaps = 39/401 (9%)

Query: 246  HEDFDGLGDVFIWG----EGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
            H D +    V +WG    E LG GL G  V              +P    +   L    I
Sbjct: 3054 HTDQELPCTVMVWGLNDKEQLG-GLKGSKVK-------------VPTFSPTISRLRPIHI 3099

Query: 302  ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFH 359
            A GSK   +V++ G++++ GEG+ G+LG GV  +V  P  +  L+   +  VA   G  H
Sbjct: 3100 AGGSKSLFVVSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKH 3159

Query: 360  TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
              A+TL G +++WG+G    G LG  +  +   PR V   +   +I  I CG  H+AAI+
Sbjct: 3160 ALALTLDGKVFSWGEG--EDGKLGHGNRSTLDKPRLVEA-LRAKKIRDIACGSSHSAAIS 3216

Query: 420  SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV--WHTAAIVEVAGKT 477
            S G+L+T+G G +G LGHGD ++   P+ V  L   + +  +CG     T A+ E     
Sbjct: 3217 SQGELYTWGLGEYGRLGHGDNATQLKPKLVAALSGRRVIQVACGSRDAQTLALTE----- 3271

Query: 478  SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
                      +F+WGDG  G+LG G +E    P  ++    I   ++ CG   ++ALT  
Sbjct: 3272 -------DGAVFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRA 3324

Query: 538  GQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
            G+V++ G  DY +LG  G    + P  I G   HR I  +A G+ H   V+   +VY WG
Sbjct: 3325 GEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGHRVIH-VAVGALHCLAVTDAGQVYAWG 3383

Query: 597  KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
               +GQ G G+    + P LV  L    V  V CGS+ + A
Sbjct: 3384 DNDHGQQGSGNTFVNKKPALVIGLDAVIVNRVACGSSHSMA 3424



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 127/394 (32%), Positives = 194/394 (49%), Gaps = 29/394 (7%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            + G   ++ WG     G LGG + G  I +        P   E+  +L    +A G +  
Sbjct: 4210 WGGASTIYGWGHN-HRGQLGG-LEGSRIKT--------PTPCEALSLLRPVQLAGGEQSL 4259

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT  G++F+ G GSGG+LG G     + P L+ +L    +  VA   G  H  A+T  
Sbjct: 4260 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTD 4319

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G++Y WG+G    G LG  + +S+  P+ V   + G+ ++ I CG  H+AAIT++G + T
Sbjct: 4320 GEVYAWGEG--EDGKLGHGNRMSYDRPKLVE-HLNGMSVADIACGSAHSAAITASGHVLT 4376

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+ VE L   + +  +CG          +G           
Sbjct: 4377 WGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG----------SGDAQTLCITDDD 4426

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   +P  ++    +   KV CG   ++ALT +G V++ G  
Sbjct: 4427 NVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4486

Query: 547  DYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
            D+ +LG  GS    + P ++   ++ + I  IA GS H    S   EV+TWG    GQLG
Sbjct: 4487 DFHRLGH-GSVEHVRRPKKVAA-LQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLG 4544

Query: 605  HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G     Q P LV AL+ K +  V CGS  T A+
Sbjct: 4545 DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4578



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 147/307 (47%), Gaps = 19/307 (6%)

Query: 286  LPKVLEST--VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLID 343
            +P +L S   V +   ++  G KH + +T  G++++WGEG  GKLGHG       PKL++
Sbjct: 4289 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 4348

Query: 344  ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
             LNG ++  +ACG  H+ A+T SG + TWG G +  G LG         P+ V   + G 
Sbjct: 4349 HLNGMSVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEALL-GY 4405

Query: 404  QISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
            +   I CG     T  IT    ++++GDG +G LG G      +P ++E+L  L  +   
Sbjct: 4406 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 4465

Query: 462  CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
            CG   + A+ +            S  ++TWG G   +LGHG  E    P  V        
Sbjct: 4466 CGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVEHVRRPKKVAALQGKKI 4513

Query: 522  CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
              +A G    +A +  G+VF+ G  D GQLG    T     R+   ++ ++I  + CGS 
Sbjct: 4514 ISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4573

Query: 582  HIAVVSS 588
            H   +S+
Sbjct: 4574 HTLALST 4580



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 143/287 (49%), Gaps = 27/287 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G+V+ WGEG  +G LG   +G  +S  DR     PK++E    +    IACGS H+  +T
Sbjct: 4320 GEVYAWGEG-EDGKLG---HGNRMSY-DR-----PKLVEHLNGMSVADIACGSAHSAAIT 4369

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
              G + +WG+G  G+LGHG   D   PKL++AL G     +ACG  +  T  +T   +++
Sbjct: 4370 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4429

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+       +P K+   + GL +  + CG   + A+T +G ++T+G G
Sbjct: 4430 SWGDG--DYGKLGRGGSDGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4486

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             F  LGHG       P++V  L+  K +  + G  H  A  +              ++FT
Sbjct: 4487 DFHRLGHGSVEHVRRPKKVAALQGKKIISIATGSLHCVACSDAG------------EVFT 4534

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
            WGD  EGQLG G       P  V         KV CG + T+AL+ +
Sbjct: 4535 WGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4581



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 145/310 (46%), Gaps = 30/310 (9%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA-CGE 357
           Q +AC     +L++K+G++++W            EA+       +  N + I + A C  
Sbjct: 603 QQVACSEDVVLLLSKEGKLYNWHIAKP-------EAEPQQLDFAEIANETFISIAAHCEG 655

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
            H  AV  + + Y+WG G  +   LG     +  +P K+   +    + S+ CG  ++AA
Sbjct: 656 RHFLAVDSNFNAYSWGVG--DSRRLGHGDCHARELPTKIESLVR--LVKSVYCGCSYSAA 711

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV--WHTAAIVEVAG 475
           IT  G L+T+G GT+G LGHG      +P  V  LK+ + V  + G    HT  +     
Sbjct: 712 ITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLT---- 767

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
               S GL    +F WGDG  G+LG+G     ++P  +     +   +V  G   ++AL+
Sbjct: 768 ----SEGL----VFAWGDGDYGKLGNGSCNSSLLPQLIDCLPRVQ--RVFAGAQFSLALS 817

Query: 536 ATGQVFSMGSADY--GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
             GQ++S G A     QL      G    R+   ++H+ I D+A G  H   +SS  E++
Sbjct: 818 CEGQLYSWGKASCLGHQLVERNVQGCSVPRLITGLQHKRIVDVAVGVAHCLALSSSGEIF 877

Query: 594 TWGKGANGQL 603
            WG+  N Q+
Sbjct: 878 GWGRNDNQQI 887



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 83/156 (53%), Gaps = 2/156 (1%)

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATGQVFSMG 544
            K++  G+G  G+LG G      +P  + V       KVA   G    +ALT  G+VFS G
Sbjct: 3114 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWG 3173

Query: 545  SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
              + G+LG    +     R+   ++ + I DIACGS H A +SS+ E+YTWG G  G+LG
Sbjct: 3174 EGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLG 3233

Query: 605  HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            HGDN  +  P LV AL  ++V  V CGS     + L
Sbjct: 3234 HGDNATQLKPKLVAALSGRRVIQVACGSRDAQTLAL 3269



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 139/304 (45%), Gaps = 48/304 (15%)

Query: 349 NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS-- 406
            +  VAC E     ++  G LY W            +++     P     Q++  +I+  
Sbjct: 601 QLQQVACSEDVVLLLSKEGKLYNW-----------HIAK-----PEAEPQQLDFAEIANE 644

Query: 407 ---SIC--CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL-KTVMA 460
              SI   C   H  A+ S    +++G G    LGHGD  +  +P ++E+L  L K+V  
Sbjct: 645 TFISIAAHCEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHARELPTKIESLVRLVKSVY- 703

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
            CG  ++AAI      T G N      L+TWG G  G+LGHG ++ + +P  V    D  
Sbjct: 704 -CGCSYSAAI------TLGGN------LYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQ 750

Query: 521 FCKVAC--GHSITIALTATGQVFSMGSADYGQLGSPGS--TGKFPTRIEGNIKHRYIEDI 576
              VA   G + T+ LT+ G VF+ G  DYG+LG+ GS  +   P  I+   +   ++ +
Sbjct: 751 VVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGN-GSCNSSLLPQLIDCLPR---VQRV 806

Query: 577 ACGSYHIAVVSSKSEVYTWGKGA--NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNF 634
             G+     +S + ++Y+WGK +    QL   + +    P L+  L+ K++  V  G   
Sbjct: 807 FAGAQFSLALSCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITGLQHKRIVDVAVGVAH 866

Query: 635 TAAI 638
             A+
Sbjct: 867 CLAL 870



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            A  ++ +G    G LG  + S    P   E L  L+ V  + G     A+          
Sbjct: 4213 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT--------- 4263

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
                  KLF  G G+ G+LG G ++   +P  +     +   KVA   G    +ALT  G
Sbjct: 4264 ---PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDG 4320

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V++ G  + G+LG          ++  ++    + DIACGS H A +++   V TWGKG
Sbjct: 4321 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKG 4380

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++  P LVEAL   +   + CGS     +C+
Sbjct: 4381 RYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCI 4422



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 26/213 (12%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
           LP  +ES V L  +S+ CG  ++  +T  G +++WG G+ G+LGHG   D   P ++ AL
Sbjct: 688 LPTKIESLVRL-VKSVYCGCSYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMAL 746

Query: 346 NGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
               +  VA   G+ HT  +T  G ++ WGDG  + G LG  S  S  +P+ +       
Sbjct: 747 KDHQVVDVALGSGDAHTLCLTSEGLVFAWGDG--DYGKLGNGSCNSSLLPQLIDCLP--- 801

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG----DRSSTSVPREVETLKELKTVM 459
           ++  +  G   + A++  G+L+++G  +   LGH     +    SVPR +  L+  + V 
Sbjct: 802 RVQRVFAGAQFSLALSCEGQLYSWGKAS--CLGHQLVERNVQGCSVPRLITGLQHKRIVD 859

Query: 460 ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            + GV H  A+             SS ++F WG
Sbjct: 860 VAVGVAHCLALS------------SSGEIFGWG 880



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 9/155 (5%)

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           KL+ W       +   +AEP+ +      ++        C     +A+ +    +S G  
Sbjct: 620 KLYNW------HIAKPEAEPQQLDFAEIANETFISIAAHCEGRHFLAVDSNFNAYSWGVG 673

Query: 547 DYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           D  +LG      +  PT+IE  +  R ++ + CG  + A ++    +YTWG+G  G+LGH
Sbjct: 674 DSRRLGHGDCHARELPTKIESLV--RLVKSVYCGCSYSAAITLGGNLYTWGRGTYGRLGH 731

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           G ++++  P +V AL+D QV  V  GS     +CL
Sbjct: 732 GTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCL 766



 Score = 43.9 bits (102), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 45/102 (44%), Gaps = 2/102 (1%)

Query: 540  VFSMGSADYGQLGS-PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            V   G  D  QLG   GS  K PT      + R I  IA GS  + VVS   +VY  G+G
Sbjct: 3063 VMVWGLNDKEQLGGLKGSKVKVPTFSPTISRLRPIH-IAGGSKSLFVVSQDGKVYACGEG 3121

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
             NG+LG G   N   P  +  L    VK V   S    A+ L
Sbjct: 3122 TNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL 3163


>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
 gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
          Length = 3806

 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 190/391 (48%), Gaps = 37/391 (9%)

Query: 255  VFIWG----EGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            V +WG    E LG GL G  V              +P   ++   L    IA GSK   +
Sbjct: 2643 VMVWGLNDKEQLG-GLKGSKVK-------------VPTFSQTISRLRPIHIAGGSKSLFI 2688

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            V++ G++++ GEG+ G+LG GV  +V  P  +  L+   +  VA   G  H  A+TL G 
Sbjct: 2689 VSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGK 2748

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +++WG+G    G LG  +  +   PR V   +   +I  + CG  H+AAI+S G+L+T+G
Sbjct: 2749 VFSWGEG--EDGKLGHGNRTTLDKPRLVEA-LRAKKIRDVACGSSHSAAISSQGELYTWG 2805

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV--WHTAAIVEVAGKTSGSNGLSSK 486
             G +G LGHGD ++   P+ V  L   + V  +CG     T A+ E              
Sbjct: 2806 LGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTE------------DG 2853

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +F+WGDG  G+LG G +E    P  ++    I   ++ CG   ++ALT  G+V++ G  
Sbjct: 2854 AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKG 2913

Query: 547  DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            DY +LG  G       +  G ++ R +  +A G+ H   V+   +VY WG   +GQ G G
Sbjct: 2914 DYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 2973

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            +    + P LV  L    V  V CGS+ + A
Sbjct: 2974 NTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3004



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 135/287 (47%), Gaps = 35/287 (12%)

Query: 349 NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSI 408
            I  VAC E     ++  G LYTW         L  + E++H +   ++G  EG      
Sbjct: 227 QIKQVACCETQMLILSQEGKLYTWRLAKPEAEPL-PMEEVAHDVFISIAGHCEGR----- 280

Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTA 468
                H  AI S    +++G G    LGHGD  + +VP ++  L++       CG  ++A
Sbjct: 281 -----HFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSA 335

Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP-LCVKVSDDISF-CKVAC 526
           AI      T G N      L TWG G   +LGHG+++ R +P L V +SD +     +  
Sbjct: 336 AI------TCGGN------LLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGS 383

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAV 585
           G + ++ALT+ G VF+ G  DYG+LG+    G   P  +E   +   ++ +  GS     
Sbjct: 384 GDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPR---VQRVFAGSQFSVA 440

Query: 586 VSSKSEVYTWGKGANGQLGHGDNENK----QTPTLVEALRDKQVKSV 628
           +SS+ ++YTWGK     LGH   E        P LV +L+ K++  V
Sbjct: 441 LSSEGQLYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVDV 485



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 156/325 (48%), Gaps = 30/325 (9%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + +AC     ++++++G++++W           +E +V++   I ++ G       C   
Sbjct: 229 KQVACCETQMLILSQEGKLYTWRLAKPEAEPLPME-EVAHDVFI-SIAGH------CEGR 280

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
           H  A+  + + Y+WG G  +   LG     +  +P K++  +E   + S+ CG  ++AAI
Sbjct: 281 HFLAIDSNHNAYSWGTGEDHR--LGHGDTHARAVPTKIAA-LEQHCVQSVYCGCSYSAAI 337

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           T  G L T+G GT+  LGHG+    S+P  V  L +           H    V +    +
Sbjct: 338 TCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSD-----------HMVVDVALGSGDA 386

Query: 479 GSNGLSSKKL-FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
            S  L+S+ L F WGDG  G+LG+G+    + P+ V+    +   +V  G   ++AL++ 
Sbjct: 387 HSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ--RVFAGSQFSVALSSE 444

Query: 538 GQVFSMGSADY--GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
           GQ+++ G A     QL      G    R+  +++H+ I D+A    H   +SS  EV+ W
Sbjct: 445 GQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGW 504

Query: 596 GKGANGQLGHGDNENK---QTPTLV 617
           G+  + Q+      ++   +TP LV
Sbjct: 505 GRNDSQQICPASVSSEPLLRTPILV 529



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 83/156 (53%), Gaps = 2/156 (1%)

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATGQVFSMG 544
            K++  G+G  G+LG G      +P  + V       KVA   G    +ALT  G+VFS G
Sbjct: 2694 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWG 2753

Query: 545  SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
              + G+LG    T     R+   ++ + I D+ACGS H A +SS+ E+YTWG G  G+LG
Sbjct: 2754 EGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLG 2813

Query: 605  HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            HGDN  +  P LV AL  ++V  V CGS     + L
Sbjct: 2814 HGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLAL 2849



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 9/175 (5%)

Query: 470 IVEVAGKTSGSNGL---SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
            + +AG   G + L   S+   ++WG G + +LGHGD   R VP  +   +      V C
Sbjct: 270 FISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYC 329

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS--YHI 583
           G S + A+T  G + + G   Y +LG   S  +  PT +     H  + D+A GS   H 
Sbjct: 330 GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVV-DVALGSGDAHS 388

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             ++S+  V+ WG G  G+LG+G+      P LVE+L   +V+ V  GS F+ A+
Sbjct: 389 LALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL--PRVQRVFAGSQFSVAL 441



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 82/157 (52%), Gaps = 14/157 (8%)

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA--CGHSITIALTATGQVFSMG 544
           KL+TW      +L   +AEP  +P+  +V+ D+ F  +A  C     +A+ +    +S G
Sbjct: 246 KLYTW------RLAKPEAEP--LPM-EEVAHDV-FISIAGHCEGRHFLAIDSNHNAYSWG 295

Query: 545 SADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           + +  +LG   +  +  PT+I    +H  ++ + CG  + A ++    + TWG+G   +L
Sbjct: 296 TGEDHRLGHGDTHARAVPTKIAALEQH-CVQSVYCGCSYSAAITCGGNLLTWGRGTYARL 354

Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           GHG+++++  PTLV AL D  V  V  GS    ++ L
Sbjct: 355 GHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLAL 391



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 12/118 (10%)

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIA--CGS 580
           +VAC  +  + L+  G++++       +L  P +    P  +E  + H     IA  C  
Sbjct: 230 QVACCETQMLILSQEGKLYTW------RLAKPEAE---PLPME-EVAHDVFISIAGHCEG 279

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            H   + S    Y+WG G + +LGHGD   +  PT + AL    V+SV CG +++AAI
Sbjct: 280 RHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAI 337



 Score = 44.3 bits (103), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 2/102 (1%)

Query: 540  VFSMGSADYGQLGS-PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            V   G  D  QLG   GS  K PT  +   + R I  IA GS  + +VS   +VY  G+G
Sbjct: 2643 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIH-IAGGSKSLFIVSQDGKVYACGEG 2701

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
             NG+LG G   N   P  +  L    VK V   S    A+ L
Sbjct: 2702 TNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL 2743


>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
 gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
          Length = 367

 Score =  176 bits (446), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 172/330 (52%), Gaps = 17/330 (5%)

Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVT-KQGQIFSWGEGSGGKLGHGVEADVSYPKL 341
           + L PK + +      +S+ CG+++ + V   +GQ++SWG G  G+LGHG   DV  P+ 
Sbjct: 52  ECLAPKAISTLTDAGIESVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRP 111

Query: 342 IDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQME 401
           I+  +G  +H VACG+ HT  V   G+L+T+G   +    LG  ++    +  ++   ++
Sbjct: 112 IEFFSGRPVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGHTNDC---LSPQLVVALQ 168

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G ++ S+ CG  H+ A T +G +F++G G +G LG G+     +P  V  L+ ++ V A 
Sbjct: 169 GERVRSVACGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAE 228

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
           CG  H+A + E              ++FT+G    GQLGHGD   R VP  V        
Sbjct: 229 CGWRHSAVVSE------------DGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHTRI 276

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
             VA G   T+A  ++G ++  G   +GQLG   S+ +  P  + G +  + +  + CG 
Sbjct: 277 SSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSSDRPSPVLVGGALAGQRVSLVTCGW 336

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            H   V+    VY+WG+G NGQLGHG  ++
Sbjct: 337 RHTVAVTEGGRVYSWGRGVNGQLGHGAEQD 366



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/342 (32%), Positives = 165/342 (48%), Gaps = 19/342 (5%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           +++CGS H+V +   G + SWG G  G+LGHG   +   PK I  L  + I  V CG  +
Sbjct: 17  AVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGAEY 76

Query: 360 TCAVTLS-GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
           T AV  S G +Y+WG G  + G LG       ++PR +     G  +  + CG  HT  +
Sbjct: 77  TIAVAPSRGQVYSWGWG--DFGRLGHGDCNDVFVPRPIE-FFSGRPVHRVACGDTHTLVV 133

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
              G+LFTFG    G LG G  +    P+ V  L+  +    +CG  H+ A  E      
Sbjct: 134 AGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATE------ 187

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
                 S  +F+WG G  G LG G+++ R +P  V   + I      CG   +  ++  G
Sbjct: 188 ------SGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAVVSEDG 241

Query: 539 QVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
           +VF+ G + YGQLG    T +  P ++   ++H  I  +A G  H     S   +Y WG 
Sbjct: 242 RVFTFGWSKYGQLGHGDHTDRTVPCQVA-ALRHTRISSVAGGWRHTMAADSSGNLYGWGW 300

Query: 598 GANGQLGHGDNENKQTPTLV-EALRDKQVKSVVCGSNFTAAI 638
              GQLG GD+ ++ +P LV  AL  ++V  V CG   T A+
Sbjct: 301 NKFGQLGLGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAV 342



 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 151/307 (49%), Gaps = 38/307 (12%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           G V+ WG G    LG+G              D  D  +P+ +E         +ACG  H 
Sbjct: 85  GQVYSWGWGDFGRLGHG--------------DCNDVFVPRPIEFFSGRPVHRVACGDTHT 130

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           ++V  +G++F++G    G+LG G   D   P+L+ AL G  +  VACG  H+ A T SG 
Sbjct: 131 LVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATESGT 190

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +++WG G    G LG       ++P +V G +EG+++ S  CG  H+A ++  G++FTFG
Sbjct: 191 VFSWGWG--RYGNLGDGESQDRYLPTRVVG-LEGIRMVSAECGWRHSAVVSEDGRVFTFG 247

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
              +G LGHGD +  +VP +V  L+  +    + G  HT A              SS  L
Sbjct: 248 WSKYGQLGHGDHTDRTVPCQVAALRHTRISSVAGGWRHTMAAD------------SSGNL 295

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVK---VSDDISFCKVACGHSITIALTATGQVFSMGS 545
           + WG    GQLG GD+  R  P+ V        +S   V CG   T+A+T  G+V+S G 
Sbjct: 296 YGWGWNKFGQLGLGDSSDRPSPVLVGGALAGQRVSL--VTCGWRHTVAVTEGGRVYSWGR 353

Query: 546 ADYGQLG 552
              GQLG
Sbjct: 354 GVNGQLG 360



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 11/234 (4%)

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           ++++ CG  H+ AI S G + ++G G  G LGHG       P+ + TL +       CG 
Sbjct: 15  VTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGA 74

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
            +T A+             S  ++++WG G  G+LGHGD     VP  ++        +V
Sbjct: 75  EYTIAVAP-----------SRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRV 123

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIA 584
           ACG + T+ +   G++F+ G    GQLG   +      ++   ++   +  +ACGS H  
Sbjct: 124 ACGDTHTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRSVACGSEHSL 183

Query: 585 VVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             +    V++WG G  G LG G+++++  PT V  L   ++ S  CG   +A +
Sbjct: 184 AATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAVV 237



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 93/187 (49%), Gaps = 14/187 (7%)

Query: 253 GDVFIWGEG-LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           G VF WG G  GN           +   + +D  LP  +     +   S  CG +H+ +V
Sbjct: 189 GTVFSWGWGRYGN-----------LGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSAVV 237

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           ++ G++F++G    G+LGHG   D + P  + AL  + I  VA G  HT A   SG+LY 
Sbjct: 238 SEDGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHTRISSVAGGWRHTMAADSSGNLYG 297

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   +  G LG         P  V G + G ++S + CG  HT A+T  G+++++G G 
Sbjct: 298 WG--WNKFGQLGLGDSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGV 355

Query: 432 FGALGHG 438
            G LGHG
Sbjct: 356 NGQLGHG 362



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 41/71 (57%)

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
           +  ++CGS H   + S   V +WG+G +GQLGHG  +    P  +  L D  ++SVVCG+
Sbjct: 15  VTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGA 74

Query: 633 NFTAAICLHKG 643
            +T A+   +G
Sbjct: 75  EYTIAVAPSRG 85



 Score = 46.2 bits (108), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV 336
           + CG +H V VT+ G+++SWG G  G+LGHG E D+
Sbjct: 332 VTCGWRHTVAVTEGGRVYSWGRGVNGQLGHGAEQDL 367


>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
          Length = 463

 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 186/369 (50%), Gaps = 41/369 (11%)

Query: 275 EISSADRRDALLPKVLESTVVLD------AQSIACGSKHAVLVT-KQGQIFSWGEGSGGK 327
           ++   D  D  +P VL  T   D      A  + CG+ H    + ++ Q++SWG G  G+
Sbjct: 51  QLGHGDAEDRPVPTVL--TAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGR 108

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG  +DV  P+ I AL G  I  +ACG+ H  AVT++G +++WG   +  G LG  + 
Sbjct: 109 LGHGNSSDVFNPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGR--NQNGQLGLGNT 166

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPR 447
               +P+K+    EG+++  I  G  HTAA+T  G L+ +G G +G LG GDR    +P 
Sbjct: 167 EDSLLPQKIQ-AFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPE 225

Query: 448 EVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR 507
           +V ++   K V+ +CG  HT  +             SS  ++T+G    GQLGHGD E  
Sbjct: 226 KVSSVNGQKMVLVACGWRHTITVS------------SSGSIYTYGWSKYGQLGHGDFEDH 273

Query: 508 VVPLCVKVSDDISFCK---------------VACGHSITIALTATGQVFSMGSADYGQLG 552
           +VP  ++   D +  +                  G  I  AL A G+++  G   +GQ+G
Sbjct: 274 LVPHKLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAADGKLYGWGWNKFGQVG 333

Query: 553 SPGSTGKFPTRIEGNIKH-RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
             G      + ++ N  + + +  +ACG  H   ++    V++WG+G +GQLGHG+  ++
Sbjct: 334 V-GDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDR 392

Query: 612 QTPTLVEAL 620
             P +++AL
Sbjct: 393 NIPKMIDAL 401



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 183/387 (47%), Gaps = 49/387 (12%)

Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
           D  +P+  E +VVL    I+ G+ H+V +   G + SWG G  G+LGHG   D   P ++
Sbjct: 11  DEAVPEAPERSVVL----ISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVL 66

Query: 343 ----DALNGSNIHMVACGEFHTCAVTLSG-DLYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
               D   G    +V CG  HT A +     LY+WG G  + G LG  +    + P+ + 
Sbjct: 67  TAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWG--DFGRLGHGNSSDVFNPQPIQ 124

Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
             ++G++I+ I CG  H  A+T AG + ++G    G LG G+   + +P++++  + ++ 
Sbjct: 125 -ALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQAFEGVRV 183

Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
            M + G  HTAA+ E               L+ WG G  G LG GD + R++P  V   +
Sbjct: 184 KMIAAGAEHTAAVTE------------DGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVN 231

Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-----PTRIEGNIKHRY 572
                 VACG   TI ++++G +++ G + YGQLG     G F     P ++E  +K   
Sbjct: 232 GQKMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGH----GDFEDHLVPHKLEA-LKDTT 286

Query: 573 I---------------EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLV 617
           I               E    G      +++  ++Y WG    GQ+G GDNE+  +P  V
Sbjct: 287 ISQEEAVELIFFFLGDEGFRVGGGIQWALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQV 346

Query: 618 EALRDKQVKSVVCGSNFTAAICLHKGV 644
               +++V  V CG   T A+   K V
Sbjct: 347 NFPNEQKVVQVACGWRHTLALTEAKNV 373



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 127/267 (47%), Gaps = 35/267 (13%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           ++   +  D+LLP+ +++   +  + IA G++H   VT+ G ++ WG G  G LG G   
Sbjct: 160 QLGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRD 219

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
           D   P+ + ++NG  + +VACG  HT  V+ SG +YT+  G    G LG      H +P 
Sbjct: 220 DRLIPEKVSSVNGQKMVLVACGWRHTITVSSSGSIYTY--GWSKYGQLGHGDFEDHLVPH 277

Query: 395 KVSG-------QMEGLQISSICCGP----------WHTAAITSAGKLFTFGDGTFGALGH 437
           K+         Q E +++     G           W   A+ + GKL+ +G   FG +G 
Sbjct: 278 KLEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQW---ALAADGKLYGWGWNKFGQVGV 334

Query: 438 GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEG 497
           GD      P +V    E K V  +CG  HT A+ E            +K +F+WG G  G
Sbjct: 335 GDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTE------------AKNVFSWGRGTSG 382

Query: 498 QLGHGDAEPRVVPLCVK-VSDDISFCK 523
           QLGHG+   R +P  +  +S D S CK
Sbjct: 383 QLGHGEIVDRNIPKMIDALSSDGSACK 409


>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
 gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
          Length = 5062

 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 126/392 (32%), Positives = 192/392 (48%), Gaps = 39/392 (9%)

Query: 255  VFIWG----EGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            V +WG    E LG GL G  V              +P   ++   L    IA GSK   +
Sbjct: 3047 VMVWGLNDKEQLG-GLKGSKVK-------------VPTFSQTISRLRPIHIAGGSKSLFV 3092

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            V++ G++++ GEG+ G+LG GV  +V  P  +  L+   +  VA   G  H  A+TL G 
Sbjct: 3093 VSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGK 3152

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +++WG+G    G LG  +  +   PR V   +   +I  I CG  H+AAI+S G+L+T+G
Sbjct: 3153 VFSWGEG--EDGKLGHGNRSTLDKPRLVEA-LRAKKIRDIACGSSHSAAISSQGELYTWG 3209

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV--WHTAAIVEVAGKTSGSNGLSSK 486
             G +G LGHGD ++   P+ V  L   + +  +CG     T A+ E              
Sbjct: 3210 LGEYGRLGHGDNATQLKPKLVTALHGRRVIQVACGSRDAQTLALTE------------DG 3257

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +F+WGDG  G+LG G +E    P  ++    I   ++ CG   ++ALT  G+V++ G  
Sbjct: 3258 AVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKG 3317

Query: 547  DYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
            DY +LG  G    + P  I G ++ R +  +A G+ H   V+   +VY WG   +GQ G 
Sbjct: 3318 DYYRLGHGGDQHVRKPQPIAG-LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGS 3376

Query: 606  GDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            G+    + P LV  L    V  V CGS+ + A
Sbjct: 3377 GNTFVNKKPALVIGLDAVFVNRVACGSSHSMA 3408



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 128/394 (32%), Positives = 194/394 (49%), Gaps = 29/394 (7%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            + G   ++ WG     G LGG + G  I +        P   E+  +L    +A G +  
Sbjct: 4195 WGGASTIYGWGHN-HRGQLGG-LEGSRIKT--------PTPCEALSLLRPIQLAGGEQSL 4244

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT  G++F+ G GSGG+LG G     + P L+ +L    +  VA   G  H  A+T  
Sbjct: 4245 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTD 4304

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G++Y WG+G    G LG  + +S+  P K+   + G+ ++ I CG  H+AAIT++G + T
Sbjct: 4305 GEVYAWGEG--EDGKLGHGNRMSYDRP-KLLEHLNGMSVADIACGSAHSAAITASGHVLT 4361

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+ VE L   + +  +CG          +G           
Sbjct: 4362 WGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG----------SGDAQTLCITDDD 4411

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   +P  ++    +   KV CG   ++ALT +G V++ G  
Sbjct: 4412 NVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4471

Query: 547  DYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
            D+ +LG  GS    + P ++   ++ + I  IA GS H    S   EVYTWG    GQLG
Sbjct: 4472 DFHRLGH-GSVDHVRRPKKVAA-LQGKKIISIATGSLHCVACSDAGEVYTWGDNDEGQLG 4529

Query: 605  HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G     Q P LV AL+ K +  V CGS  T A+
Sbjct: 4530 DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4563



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 147/307 (47%), Gaps = 19/307 (6%)

Query: 286  LPKVLEST--VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLID 343
            +P +L S   V +   ++  G KH + +T  G++++WGEG  GKLGHG       PKL++
Sbjct: 4274 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLLE 4333

Query: 344  ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
             LNG ++  +ACG  H+ A+T SG + TWG G +  G LG         P+ V   + G 
Sbjct: 4334 HLNGMSVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEALL-GY 4390

Query: 404  QISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
            +   I CG     T  IT    ++++GDG +G LG G      +P ++E+L  L  +   
Sbjct: 4391 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 4450

Query: 462  CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
            CG   + A+ +            S  ++TWG G   +LGHG  +    P  V        
Sbjct: 4451 CGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4498

Query: 522  CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
              +A G    +A +  G+V++ G  D GQLG    T     R+   ++ ++I  + CGS 
Sbjct: 4499 ISIATGSLHCVACSDAGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4558

Query: 582  HIAVVSS 588
            H   +S+
Sbjct: 4559 HTLALST 4565



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 143/287 (49%), Gaps = 27/287 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G+V+ WGEG  +G LG   +G  +S  DR     PK+LE    +    IACGS H+  +T
Sbjct: 4305 GEVYAWGEG-EDGKLG---HGNRMSY-DR-----PKLLEHLNGMSVADIACGSAHSAAIT 4354

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
              G + +WG+G  G+LGHG   D   PKL++AL G     +ACG  +  T  +T   +++
Sbjct: 4355 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4414

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+       +P K+   + GL +  + CG   + A+T +G ++T+G G
Sbjct: 4415 SWGDG--DYGKLGRGGSDGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4471

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             F  LGHG       P++V  L+  K +  + G  H  A  +              +++T
Sbjct: 4472 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDAG------------EVYT 4519

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
            WGD  EGQLG G       P  V         KV CG + T+AL+ +
Sbjct: 4520 WGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4566



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 148/317 (46%), Gaps = 32/317 (10%)

Query: 293 TVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM 352
           T     + +AC     VL+ ++G++++W           +    + P+L+D    +N   
Sbjct: 568 TCKFQLKQVACSEDMVVLLCQEGKLYNWP----------IAKPETEPQLLDFAEIANETF 617

Query: 353 VA----CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSI 408
           V+    C   H  AV  + + Y+WG G  +   LG     +  +P K+   +   ++ S+
Sbjct: 618 VSIAAHCEGRHFLAVDSNHNAYSWGVG--DSRRLGHGDCHARELPTKIESLVR--RVQSV 673

Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTA 468
            CG  ++AAIT  G L+T+G GT+G LGHG+     +P  V  LK+ + +  + G     
Sbjct: 674 YCGCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAH 733

Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH 528
            +    G      GL    ++ WGDG  G+LG+G     + PL ++    +   +V  G 
Sbjct: 734 TLCLTRG------GL----VYAWGDGDYGKLGNGSCNSSLQPLLIECLPRVQ--RVFAGS 781

Query: 529 SITIALTATGQVFSMGSADY--GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
             ++ALT  GQ++S G A     QL      G    R+  +++H+ I  +A G  H   +
Sbjct: 782 QFSLALTCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVHVAVGVAHCLAL 841

Query: 587 SSKSEVYTWGKGANGQL 603
           SS  E++ WG+  N Q+
Sbjct: 842 SSNGEIFGWGRNDNQQI 858



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 83/156 (53%), Gaps = 2/156 (1%)

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATGQVFSMG 544
            K++  G+G  G+LG G      +P  + V       KVA   G    +ALT  G+VFS G
Sbjct: 3098 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWG 3157

Query: 545  SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
              + G+LG    +     R+   ++ + I DIACGS H A +SS+ E+YTWG G  G+LG
Sbjct: 3158 EGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLG 3217

Query: 605  HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            HGDN  +  P LV AL  ++V  V CGS     + L
Sbjct: 3218 HGDNATQLKPKLVTALHGRRVIQVACGSRDAQTLAL 3253



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/214 (31%), Positives = 107/214 (50%), Gaps = 28/214 (13%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
           LP  +ES +V   QS+ CG  ++  +T +G +++WG G+ G+LGHG   D   P ++ AL
Sbjct: 659 LPTKIES-LVRRVQSVYCGCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMAL 717

Query: 346 NGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
               +  VA   G+ HT  +T  G +Y WGDG  + G LG  S  S   P  +    E L
Sbjct: 718 KDHQVLDVALGSGDAHTLCLTRGGLVYAWGDG--DYGKLGNGSCNSSLQPLLI----ECL 771

Query: 404 -QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG----DRSSTSVPREVETLKELKTV 458
            ++  +  G   + A+T  G+L+++G  +   LGH     +    SVPR + +L+  + V
Sbjct: 772 PRVQRVFAGSQFSLALTCEGQLYSWGKAS--CLGHQLVERNVQGCSVPRLITSLQHKRIV 829

Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
             + GV H  A+         SNG    ++F WG
Sbjct: 830 HVAVGVAHCLAL--------SSNG----EIFGWG 851



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            A  ++ +G    G LG  + S    P   E L  L+ +  + G     A+          
Sbjct: 4198 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPIQLAGGEQSLFAVT--------- 4248

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
                  KLF  G G+ G+LG G ++   +P  +     +   KVA   G    +ALT  G
Sbjct: 4249 ---PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTDG 4305

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V++ G  + G+LG          ++  ++    + DIACGS H A +++   V TWGKG
Sbjct: 4306 EVYAWGEGEDGKLGHGNRMSYDRPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGKG 4365

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++  P LVEAL   +   + CGS     +C+
Sbjct: 4366 RYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCI 4407



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 10/175 (5%)

Query: 470 IVEVAGKTSGSNGL---SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK-VA 525
            V +A    G + L   S+   ++WG G   +LGHGD   R +P   K+   +   + V 
Sbjct: 617 FVSIAAHCEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELP--TKIESLVRRVQSVY 674

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS--YHI 583
           CG S + A+T  G +++ G   YG+LG   S  +    +   +K   + D+A GS   H 
Sbjct: 675 CGCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHT 734

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             ++    VY WG G  G+LG+G   +   P L+E L   +V+ V  GS F+ A+
Sbjct: 735 LCLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECL--PRVQRVFAGSQFSLAL 787



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 9/158 (5%)

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           KL+ W       +   + EP+++      ++        C     +A+ +    +S G  
Sbjct: 591 KLYNW------PIAKPETEPQLLDFAEIANETFVSIAAHCEGRHFLAVDSNHNAYSWGVG 644

Query: 547 DYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           D  +LG      +  PT+IE  +  R ++ + CG  + A ++ +  +YTWG+G  G+LGH
Sbjct: 645 DSRRLGHGDCHARELPTKIESLV--RRVQSVYCGCSYSAAITLRGNLYTWGRGTYGRLGH 702

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
           G+++++  P +V AL+D QV  V  GS     +CL +G
Sbjct: 703 GNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRG 740



 Score = 45.1 bits (105), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 46/102 (45%), Gaps = 2/102 (1%)

Query: 540  VFSMGSADYGQLGS-PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            V   G  D  QLG   GS  K PT  +   + R I  IA GS  + VVS   +VY  G+G
Sbjct: 3047 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIH-IAGGSKSLFVVSQDGKVYACGEG 3105

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
             NG+LG G   N   P  +  L    VK V   S    A+ L
Sbjct: 3106 TNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL 3147


>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Nomascus leucogenys]
          Length = 4855

 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 124/389 (31%), Positives = 194/389 (49%), Gaps = 39/389 (10%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DV++WG G  +G L  A           R+ ++P    S     AQ + CG     ++  
Sbjct: 3997 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4043

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 4044 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4103

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG  +      P       +G ++  + CG  H+A +TS GKLFTFG+G
Sbjct: 4104 SWGDG--DYGKLGHGNSDRQRRP------XQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4155

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LG G+ S+  +P  V  L+  +    +CG+ HT A+        GS       ++ 
Sbjct: 4156 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4204

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +GDG  G+LG G++  +  P  + V   I   KVACG   ++ALT  G V++ G      
Sbjct: 4205 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4262

Query: 551  LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +G P    +   R +    +    IED+A G+ H   ++S  +VY WG  + GQLG G  
Sbjct: 4263 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4322

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + + PTLV  L+ K V+ +  G   +AA
Sbjct: 4323 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4351



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + D++ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 155/330 (46%), Gaps = 35/330 (10%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            ++ WG G  G+L   G  V    + P        S    V CG+  T  +  +G +   G
Sbjct: 3998 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4051

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 4052 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4108

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHG+      P + E     + V  SCG  H+A +             S  KLFT
Sbjct: 4109 DYGKLGHGNSDRQRRPXQGE-----EVVQMSCGFKHSAVVT------------SDGKLFT 4151

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
            +G+G  G+LG G+   + +P  V   +     +VACG + T+A++A G  V++ G  DYG
Sbjct: 4152 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4211

Query: 550  QLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            +LG   ST K  P +I+  +    I+ +ACG+     ++    VYT+G+     L  G  
Sbjct: 4212 KLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4270

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             N   P  +  L    ++ V  G+  T A+
Sbjct: 4271 RNHNRPQQIPVLAGVIIEDVAVGAEHTLAL 4300



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 137/278 (49%), Gaps = 33/278 (11%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            D+Y WG G H     GQ++E      +P       +  Q+    CG   T  I + G + 
Sbjct: 3997 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFSQAQQV---ICGQNCTFVIQANGTVL 4048

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
              G+G++G LG G+     V   +  L+   +  ++ SCG   H+ A+ E          
Sbjct: 4049 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4098

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P            +++CG   +  +T+ G++F+
Sbjct: 4099 --SGEVFSWGDGDYGKLGHGNSDRQRRP-----XQGEEVVQMSCGFKHSAVVTSDGKLFT 4151

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
             G+ DYG+LG    S  K P R+   ++   I  +ACG  H +AV +  S V+ +G G  
Sbjct: 4152 FGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4210

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G++  K +P  ++ L    +K V CG+ F+ A+
Sbjct: 4211 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4248



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 129/266 (48%), Gaps = 43/266 (16%)

Query: 253  GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            G+VF WG+G    LG+G            ++DR+    P   E  V      ++CG KH+
Sbjct: 4100 GEVFSWGDGDYGKLGHG------------NSDRQRR--PXQGEEVV-----QMSCGFKHS 4140

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
             +VT  G++F++G G  G+LG G  ++   P+ + AL G  I  VACG  HT AV+  G 
Sbjct: 4141 AVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGS 4200

Query: 369  L-YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            + + +GDG  + G LG  +  +   P+K+   + G+ I  + CG   + A+T  G ++TF
Sbjct: 4201 MVWAFGDG--DYGKLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTF 4257

Query: 428  GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
            G      L  G   + + P+++  L  +     + G  HT A+         SNG     
Sbjct: 4258 GQDRLIGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLAL--------ASNG----D 4305

Query: 488  LFTWGDGAEGQLGHGDA----EPRVV 509
            ++ WG  +EGQLG G      EP +V
Sbjct: 4306 VYAWGSNSEGQLGLGHTNHVREPTLV 4331



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)

Query: 289  VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            VL   ++ D   +A G++H + +   G +++WG  S G+LG G    V  P L+  L G 
Sbjct: 4281 VLAGVIIED---VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGK 4337

Query: 349  NIHMVACGEFHTCAVT 364
            N+  ++ G  H+ A T
Sbjct: 4338 NVRQISAGRCHSAAWT 4353


>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 4784

 Score =  175 bits (444), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 201/402 (50%), Gaps = 37/402 (9%)

Query: 255  VFIWG----EGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            V +WG    E LG GL G  V              LP        L    I+ GSK   +
Sbjct: 2909 VLVWGLNDKEQLG-GLKGSKVK-------------LPTYSSVLSQLKPIHISGGSKSLFI 2954

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            V++ G++++ GEG+ G+LG G   +V  P+ +  LN   +  VA   G  H  A+TL G 
Sbjct: 2955 VSQDGKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGK 3014

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +++WG+G    G LG  + ++   P K+   +   +I  I CG  H+AAITS+G+L+T+G
Sbjct: 3015 VFSWGEG--EDGKLGHGNRVTLEKP-KLLESLRTKRIRDIACGSSHSAAITSSGELYTWG 3071

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGHGD  +   P+ V  L+  + V  +CG            + + +  L+ + L
Sbjct: 3072 LGEYGRLGHGDNCTQLKPKLVTALQGHRVVQVACG-----------SRDAQTLCLTEEGL 3120

Query: 489  -FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
             F+WGDG  G+LG G +E   VP  V+  + +   ++ CG   ++ALT  G+V++ G  D
Sbjct: 3121 VFSWGDGDFGKLGRGGSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGKGD 3180

Query: 548  YGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            Y +LG       + PT I+G ++ + +  +A G+ H   V+   +V+ WG   +GQ G G
Sbjct: 3181 YYRLGHGTDQHVRKPTPIQG-LRGKKVIHVAVGALHCLAVTDSGQVFAWGDNDHGQQGSG 3239

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIAD 648
            +    + P LV  L    V  V CGS+ + A  L +  S  D
Sbjct: 3240 NTVVNKKPNLVLGLDGVFVNRVACGSSHSVAWSLPQNPSEKD 3281



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/334 (33%), Positives = 169/334 (50%), Gaps = 29/334 (8%)

Query: 253  GDVFIWGEGLGNGLLG-GAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
            G ++  GEG  NG LG G  N V      R+  +L     +  V+   ++  G KHA+ +
Sbjct: 2959 GKLYACGEG-TNGRLGLGHNNNV---PTPRQVPIL-----NQYVVKKVAVHSGGKHAMAL 3009

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T  G++FSWGEG  GKLGHG    +  PKL+++L    I  +ACG  H+ A+T SG+LYT
Sbjct: 3010 TLDGKVFSWGEGEDGKLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYT 3069

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGD 429
            WG G    G LG     +   P+ V+  ++G ++  + CG     T  +T  G +F++GD
Sbjct: 3070 WGLG--EYGRLGHGDNCTQLKPKLVTA-LQGHRVVQVACGSRDAQTLCLTEEGLVFSWGD 3126

Query: 430  GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
            G FG LG G     SVP +VE L  +  V   CG   + A+ ++             +++
Sbjct: 3127 GDFGKLGRGGSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIG------------EVW 3174

Query: 490  TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
            TWG G   +LGHG  +    P  ++         VA G    +A+T +GQVF+ G  D+G
Sbjct: 3175 TWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVFAWGDNDHG 3234

Query: 550  QLGSPGS-TGKFPTRIEGNIKHRYIEDIACGSYH 582
            Q GS  +   K P  + G +   ++  +ACGS H
Sbjct: 3235 QQGSGNTVVNKKPNLVLG-LDGVFVNRVACGSSH 3267



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 167/373 (44%), Gaps = 74/373 (19%)

Query: 317  IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG--- 373
            IF WG    G+LG    + +  P   +AL+      +A GE    AVT  G LY  G   
Sbjct: 3946 IFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGA 4005

Query: 374  ---------DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
                     D +    L   V  + H I +KV+          +  G  H  A++S G++
Sbjct: 4006 GGRLGIGGTDSVSTPTL---VESLQHVIIKKVA----------VNSGGKHCLALSSDGEV 4052

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
            F++G+G  G LGHG+R S   P+ +E L  +  V  +CG  H+A I             S
Sbjct: 4053 FSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVVDIACGSAHSACIT------------S 4100

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVP-----------------LCVKVSDDISF------ 521
               + TWG G  G+LGHGD+E ++ P                 +   +++++        
Sbjct: 4101 QGHVLTWGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPM 4160

Query: 522  ----------CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIK 569
                       KV CG   ++ALT +G V++ G  DY +LG  G+T   + P ++   ++
Sbjct: 4161 KIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGH-GNTDHVRRPKKVAA-LQ 4218

Query: 570  HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVV 629
             + I  IA GS H    S   EV+TWG    GQLG G     Q P LV++L+ K +  V+
Sbjct: 4219 GKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVI 4278

Query: 630  CGSNFTAAICLHK 642
            CGS  T A+  ++
Sbjct: 4279 CGSAHTLALSTYQ 4291



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 157/312 (50%), Gaps = 32/312 (10%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA- 354
           L  + +AC      +VT  GQ++S          H   A+   PKL++ L G ++  +A 
Sbjct: 534 LQVRQVACTENSIYIVTTSGQLYSI---------HSSCAETVAPKLVEGLEGVSVIQIAA 584

Query: 355 -CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
            C   H  A++ +G++Y+WG G    G LG     S  +P K++ +    Q+++I  G  
Sbjct: 585 HCEGRHAMALSSAGEVYSWGAG--EGGRLGHGDTASKEVPTKIALEK---QVTAIYAGAS 639

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV--WHTAAIV 471
           ++AA++S G+LFT+G GT+G LGHG+     VP +V+ LK  K V  + G    H+ A+ 
Sbjct: 640 YSAAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVT 699

Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
           +         GL    LF WGDG  G+LG+G       PL V++    S  ++  G   +
Sbjct: 700 D--------GGL----LFAWGDGDFGKLGNGSCNGS--PLPVQIEGVSSVARIYSGSQFS 745

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
           +AL+  G ++S G    G+LG   S      ++   ++ + I D+A GS H   ++S  E
Sbjct: 746 VALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGE 805

Query: 592 VYTWGKGANGQL 603
           +Y WG+    Q+
Sbjct: 806 LYGWGRNDYQQI 817



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 131/281 (46%), Gaps = 44/281 (15%)

Query: 287  PKVLEST--VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
            P ++ES   V++   ++  G KH + ++  G++FSWGEG  GKLGHG       PKLI+A
Sbjct: 4020 PTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEA 4079

Query: 345  LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH-------------------------NL 379
            L+G  +  +ACG  H+  +T  G + TWG G +                          +
Sbjct: 4080 LSGIGVVDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCGV 4139

Query: 380  GLLGQVSEISHWIPRKVSGQME-----GLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            G+   ++ ++  +P      M+     GL +  + CG   + A+T +G ++T+G G +  
Sbjct: 4140 GVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHR 4199

Query: 435  LGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG 494
            LGHG+      P++V  L+  K +  + G  H  A  +            S ++FTWGD 
Sbjct: 4200 LGHGNTDHVRRPKKVAALQGKKIISIATGSLHCVACSD------------SGEVFTWGDN 4247

Query: 495  AEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             EGQLG G       P  V+        KV CG + T+AL+
Sbjct: 4248 DEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4288



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 132/287 (45%), Gaps = 48/287 (16%)

Query: 218  DANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEIS 277
            D+ S  +  +S +  +   V+ +S G         G+VF WGEG  +G LG         
Sbjct: 4015 DSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEG-EDGKLGHGNR----D 4069

Query: 278  SADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS 337
            S DR     PK++E+   +    IACGS H+  +T QG + +WG+G  G+LGHG   D  
Sbjct: 4070 SYDR-----PKLIEALSGIGVVDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQL 4124

Query: 338  YPKL---------------------------------IDALNGSNIHMVACGEFHTCAVT 364
             PK                                  I++L G  +  V CG   + A+T
Sbjct: 4125 QPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQFSVALT 4184

Query: 365  LSGDLYTWGDG-IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGK 423
             SG +YTWG G  H LG  G    +    P+KV+  ++G +I SI  G  H  A + +G+
Sbjct: 4185 RSGSVYTWGKGDYHRLG-HGNTDHVRR--PKKVAA-LQGKKIISIATGSLHCVACSDSGE 4240

Query: 424  LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
            +FT+GD   G LG G  ++   PR V++L+    V   CG  HT A+
Sbjct: 4241 VFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLAL 4287



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 116/243 (47%), Gaps = 33/243 (13%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+V+ WG G G  L  G     E+ +           LE  V     +I  G+ ++  V+
Sbjct: 598 GEVYSWGAGEGGRLGHGDTASKEVPTK--------IALEKQVT----AIYAGASYSAAVS 645

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLY 370
             G++F+WG G+ G+LGHG   D   P  + AL    +  VA   G+ H+ AVT  G L+
Sbjct: 646 SVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLF 705

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGD 429
            WGDG  + G LG  S     +P     Q+EG+  ++ I  G   + A++  G L+++G 
Sbjct: 706 AWGDG--DFGKLGNGSCNGSPLPV----QIEGVSSVARIYSGSQFSVALSYDGTLYSWGK 759

Query: 430 GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
           G  G LGHG+   ++VP+ V  L+  K V  + G  H  A+             SS +L+
Sbjct: 760 GHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLALT------------SSGELY 807

Query: 490 TWG 492
            WG
Sbjct: 808 GWG 810



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 105/222 (47%), Gaps = 23/222 (10%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            A  +F +G    G LG  D S   +P   E L  L+ +  + G     A+          
Sbjct: 3943 ASTIFGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVT--------- 3993

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
                  KL+  G GA G+LG G  +    P  V+    +   KVA   G    +AL++ G
Sbjct: 3994 ---PDGKLYATGYGAGGRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSSDG 4050

Query: 539  QVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
            +VFS G  + G+LG  G+   +  P  IE  +    + DIACGS H A ++S+  V TWG
Sbjct: 4051 EVFSWGEGEDGKLGH-GNRDSYDRPKLIEA-LSGIGVVDIACGSAHSACITSQGHVLTWG 4108

Query: 597  KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            KG  G+LGHGD+E++  P     LR     +++CG   TA +
Sbjct: 4109 KGRYGRLGHGDSEDQLQPKRC-VLR----TTIMCGVGVTAIM 4145



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 27/171 (15%)

Query: 484 SSKKLFTWG---------------DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH 528
           S++K+FT G                 A  QL  G   PR     +++   +   +VAC  
Sbjct: 485 SAQKIFTLGWSSCSPEMYGFTSEASNASAQLLAGSV-PRYSTATIELPPSLQVRQVACTE 543

Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIA-CGSYHIAVVS 587
           +    +T +GQ++S+ S+    +         P  +EG      I+  A C   H   +S
Sbjct: 544 NSIYIVTTSGQLYSIHSSCAETVA--------PKLVEGLEGVSVIQIAAHCEGRHAMALS 595

Query: 588 SKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           S  EVY+WG G  G+LGHGD  +K+ PT +    +KQV ++  G++++AA+
Sbjct: 596 SAGEVYSWGAGEGGRLGHGDTASKEVPTKIAL--EKQVTAIYAGASYSAAV 644


>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
 gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
          Length = 4908

 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 189/391 (48%), Gaps = 37/391 (9%)

Query: 255  VFIWG----EGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            V +WG    E LG GL G  V              +P   ++   L    IA GSK   +
Sbjct: 2985 VMVWGLNDKEQLG-GLKGSKVK-------------VPTFSQTISRLRPIHIAGGSKSLFI 3030

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            V++ G++++ GEG+ G+LG GV  +V  P  +  L+   +  VA   G  H  A+TL G 
Sbjct: 3031 VSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGK 3090

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +++WG+G    G LG  +  +   PR V   +   +I  + CG  H+AAI+S G+L+T+G
Sbjct: 3091 VFSWGEG--EDGKLGHGNRTTLDKPRLVEA-LRAKKIRDVACGSSHSAAISSQGELYTWG 3147

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV--WHTAAIVEVAGKTSGSNGLSSK 486
             G +G LGHGD  +   P+ V  L   + V  +CG     T A+ E              
Sbjct: 3148 LGEYGRLGHGDNVTQLKPKLVVALAGRRVVQVACGSRDAQTLALTE------------DG 3195

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +F+WGDG  G+LG G +E    P  ++    I   ++ CG   ++ALT  G+V++ G  
Sbjct: 3196 AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKG 3255

Query: 547  DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            DY +LG  G       +  G ++ R +  +A G+ H   V+   +VY WG   +GQ G G
Sbjct: 3256 DYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 3315

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            +    + P LV  L    V  V CGS+ + A
Sbjct: 3316 NTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3346



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 128/394 (32%), Positives = 194/394 (49%), Gaps = 29/394 (7%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            + G   ++ WG     G LGG + G  I +        P   E+  +L    +A G +  
Sbjct: 4041 WGGASTIYGWGHN-HRGQLGG-LEGSRIKT--------PTPCEALSLLRPVQLAGGEQSL 4090

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT  G++F+ G GSGG+LG G     + P L+ +L    +  VA   G  H  A+T  
Sbjct: 4091 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 4150

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G++Y WG+G    G LG  + +S+  P+ V   + G+ ++ I CG  H+AAIT++G + T
Sbjct: 4151 GEVYAWGEG--EDGKLGHGNRMSYDRPKLVE-HLNGMSVADIACGSAHSAAITASGHVLT 4207

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+ VE L   + +  +CG          +G           
Sbjct: 4208 WGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG----------SGDAQTLCITDDD 4257

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   +P  ++    +   KV CG   ++ALT +G V++ G  
Sbjct: 4258 NVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKG 4317

Query: 547  DYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
            D+ +LG  GS    + P ++   ++ + I  IA GS H    S   EVYTWG    GQLG
Sbjct: 4318 DFHRLGH-GSVDHVRRPKKVAA-LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG 4375

Query: 605  HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G     Q P LV AL+ K +  V CGS  T A+
Sbjct: 4376 DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4409



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 149/307 (48%), Gaps = 19/307 (6%)

Query: 286  LPKVLEST--VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLID 343
            +P +L S   V +   ++  G KH + +T +G++++WGEG  GKLGHG       PKL++
Sbjct: 4120 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 4179

Query: 344  ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
             LNG ++  +ACG  H+ A+T SG + TWG G +  G LG         P+ V   + G 
Sbjct: 4180 HLNGMSVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEALL-GY 4236

Query: 404  QISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
            +   I CG     T  IT    ++++GDG +G LG G      +P ++E+L  L  V   
Sbjct: 4237 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVE 4296

Query: 462  CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
            CG   + A+ +            S  ++TWG G   +LGHG  +    P  V        
Sbjct: 4297 CGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4344

Query: 522  CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
              +A G    +A + +G+V++ G  D GQLG    T     R+   ++ ++I  + CGS 
Sbjct: 4345 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4404

Query: 582  HIAVVSS 588
            H   +S+
Sbjct: 4405 HTLALST 4411



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 144/287 (50%), Gaps = 27/287 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G+V+ WGEG  +G LG   +G  +S  DR     PK++E    +    IACGS H+  +T
Sbjct: 4151 GEVYAWGEG-EDGKLG---HGNRMSY-DR-----PKLVEHLNGMSVADIACGSAHSAAIT 4200

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
              G + +WG+G  G+LGHG   D   PKL++AL G     +ACG  +  T  +T   +++
Sbjct: 4201 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4260

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+       +P K+   + GL +  + CG   + A+T +G ++T+G G
Sbjct: 4261 SWGDG--DYGKLGRGGSDGCKLPYKIES-LAGLGVVKVECGSQFSVALTKSGAVYTWGKG 4317

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             F  LGHG       P++V  L+  K +  + G  H  A  +            S +++T
Sbjct: 4318 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSD------------SGEVYT 4365

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
            WGD  EGQLG G       P  V         KV CG + T+AL+ +
Sbjct: 4366 WGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4412



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 135/287 (47%), Gaps = 35/287 (12%)

Query: 349 NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSI 408
            I  VAC E     ++  G LYTW         L  + E++H +   ++G  EG      
Sbjct: 570 QIKQVACCETQMLILSQEGKLYTWRLAKPEAEPL-PMEEVAHEVFISIAGHCEGR----- 623

Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTA 468
                H  AI S    +++G G    LGHGD  + +VP ++  L++       CG  ++A
Sbjct: 624 -----HFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSA 678

Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP-LCVKVSDDISF-CKVAC 526
           AI      T G N      L TWG G   +LGHG+++ R +P L V +SD +     +  
Sbjct: 679 AI------TCGGN------LLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGS 726

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAV 585
           G + ++ALT+ G VF+ G  DYG+LG+    G   P  +E   +   ++ +  GS     
Sbjct: 727 GDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPR---VQRVFAGSQFSLA 783

Query: 586 VSSKSEVYTWGKGANGQLGHGDNENK----QTPTLVEALRDKQVKSV 628
           +SS+ ++Y+WGK     LGH   E        P LV +L+ K++  V
Sbjct: 784 LSSEGQLYSWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVDV 828



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 156/325 (48%), Gaps = 30/325 (9%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + +AC     ++++++G++++W           +E +V++   I ++ G       C   
Sbjct: 572 KQVACCETQMLILSQEGKLYTWRLAKPEAEPLPME-EVAHEVFI-SIAGH------CEGR 623

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
           H  A+  + + Y+WG G  +   LG     +  +P K++  +E   + S+ CG  ++AAI
Sbjct: 624 HFLAIDSNHNAYSWGTGEDHR--LGHGDTHARAVPTKIAA-LEQHCVQSVYCGCSYSAAI 680

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           T  G L T+G GT+  LGHG+    S+P  V  L +           H    V +    +
Sbjct: 681 TCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSD-----------HMVVDVALGSGDA 729

Query: 479 GSNGLSSKKL-FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
            S  L+S+ L F WGDG  G+LG+G+    + P+ V+    +   +V  G   ++AL++ 
Sbjct: 730 HSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ--RVFAGSQFSLALSSE 787

Query: 538 GQVFSMGSADY--GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
           GQ++S G A     QL      G    R+  +++H+ I D+A    H   +SS  EV+ W
Sbjct: 788 GQLYSWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGW 847

Query: 596 GKGANGQLGHGDNENK---QTPTLV 617
           G+  + Q+      ++   +TP LV
Sbjct: 848 GRNDSQQICPASVSSEPLLRTPILV 872



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 83/156 (53%), Gaps = 2/156 (1%)

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATGQVFSMG 544
            K++  G+G  G+LG G      +P  + V       KVA   G    +ALT  G+VFS G
Sbjct: 3036 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWG 3095

Query: 545  SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
              + G+LG    T     R+   ++ + I D+ACGS H A +SS+ E+YTWG G  G+LG
Sbjct: 3096 EGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLG 3155

Query: 605  HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            HGDN  +  P LV AL  ++V  V CGS     + L
Sbjct: 3156 HGDNVTQLKPKLVVALAGRRVVQVACGSRDAQTLAL 3191



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 9/175 (5%)

Query: 470 IVEVAGKTSGSNGL---SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
            + +AG   G + L   S+   ++WG G + +LGHGD   R VP  +   +      V C
Sbjct: 613 FISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYC 672

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS--YHI 583
           G S + A+T  G + + G   Y +LG   S  +  PT +     H  + D+A GS   H 
Sbjct: 673 GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVV-DVALGSGDAHS 731

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             ++S+  V+ WG G  G+LG+G+      P LVE+L   +V+ V  GS F+ A+
Sbjct: 732 LALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL--PRVQRVFAGSQFSLAL 784



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            A  ++ +G    G LG  + S    P   E L  L+ V  + G     A+          
Sbjct: 4044 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT--------- 4094

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
                  KLF  G G+ G+LG G ++   +P  +     +   KVA   G    +ALT  G
Sbjct: 4095 ---PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4151

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V++ G  + G+LG          ++  ++    + DIACGS H A +++   V TWGKG
Sbjct: 4152 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKG 4211

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++  P LVEAL   +   + CGS     +C+
Sbjct: 4212 RYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCI 4253



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 14/157 (8%)

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA--CGHSITIALTATGQVFSMG 544
           KL+TW      +L   +AEP  +P+  +V+ ++ F  +A  C     +A+ +    +S G
Sbjct: 589 KLYTW------RLAKPEAEP--LPM-EEVAHEV-FISIAGHCEGRHFLAIDSNHNAYSWG 638

Query: 545 SADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           + +  +LG   +  +  PT+I    +H  ++ + CG  + A ++    + TWG+G   +L
Sbjct: 639 TGEDHRLGHGDTHARAVPTKIAALEQH-CVQSVYCGCSYSAAITCGGNLLTWGRGTYARL 697

Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           GHG+++++  PTLV AL D  V  V  GS    ++ L
Sbjct: 698 GHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLAL 734



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 12/118 (10%)

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIA--CGS 580
           +VAC  +  + L+  G++++       +L  P +    P  +E  + H     IA  C  
Sbjct: 573 QVACCETQMLILSQEGKLYTW------RLAKPEAE---PLPME-EVAHEVFISIAGHCEG 622

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            H   + S    Y+WG G + +LGHGD   +  PT + AL    V+SV CG +++AAI
Sbjct: 623 RHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAI 680



 Score = 44.3 bits (103), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 2/102 (1%)

Query: 540  VFSMGSADYGQLGS-PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            V   G  D  QLG   GS  K PT  +   + R I  IA GS  + +VS   +VY  G+G
Sbjct: 2985 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIH-IAGGSKSLFIVSQDGKVYACGEG 3043

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
             NG+LG G   N   P  +  L    VK V   S    A+ L
Sbjct: 3044 TNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL 3085


>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
 gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
          Length = 2660

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 190/391 (48%), Gaps = 37/391 (9%)

Query: 255  VFIWG----EGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            V +WG    E LG GL G  V              +P   ++   L    IA GSK   +
Sbjct: 734  VMVWGLNDKEQLG-GLKGSKVK-------------VPTFSQTISRLRPIHIAGGSKSLFI 779

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            V++ G++++ GEG+ G+LG GV  +V  P  +  L+   +  VA   G  H  A+TL G 
Sbjct: 780  VSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGK 839

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +++WG+G    G LG  +  +   PR V   +   +I  + CG  H+AAI+S G+L+T+G
Sbjct: 840  VFSWGEG--EDGKLGHGNRTTLDKPRLVEA-LRAKKIRDVACGSSHSAAISSQGELYTWG 896

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV--WHTAAIVEVAGKTSGSNGLSSK 486
             G +G LGHGD ++   P+ V  L   + V  +CG     T A+ E              
Sbjct: 897  LGEYGRLGHGDNATQLKPKLVTALAGRRVVQVACGSRDAQTLALTE------------DG 944

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +F+WGDG  G+LG G +E    P  ++    I   ++ CG   ++ALT  G+V++ G  
Sbjct: 945  AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKG 1004

Query: 547  DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            DY +LG  G       +  G ++ R +  +A G+ H   V+   +VY WG   +GQ G G
Sbjct: 1005 DYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 1064

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            +    + P LV  L    V  V CGS+ + A
Sbjct: 1065 NTFVNKKPALVIGLDAVFVNRVACGSSHSIA 1095



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 128/394 (32%), Positives = 194/394 (49%), Gaps = 29/394 (7%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            + G   ++ WG     G LGG + G  I +        P   E+  +L    +A G +  
Sbjct: 1793 WGGASTIYGWGHN-HRGQLGG-LEGSRIKT--------PTPCEALSLLRPVQLAGGEQSL 1842

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT  G++F+ G GSGG+LG G     + P L+ +L    +  VA   G  H  A+T  
Sbjct: 1843 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 1902

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G++Y WG+G    G LG  + +S+  P+ V   + G+ ++ I CG  H+AAIT++G + T
Sbjct: 1903 GEVYAWGEG--EDGKLGHGNRMSYDRPKLVE-HLNGMSVADIACGSAHSAAITASGHVLT 1959

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+ VE L   + +  +CG          +G           
Sbjct: 1960 WGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG----------SGDAQTLCITDDD 2009

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   +P  ++    +   KV CG   ++ALT +G V++ G  
Sbjct: 2010 NVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKG 2069

Query: 547  DYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
            D+ +LG  GS    + P ++   ++ + I  IA GS H    S   EVYTWG    GQLG
Sbjct: 2070 DFHRLGH-GSVDHVRRPKKVAA-LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG 2127

Query: 605  HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G     Q P LV AL+ K +  V CGS  T A+
Sbjct: 2128 DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 2161



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 148/307 (48%), Gaps = 19/307 (6%)

Query: 286  LPKVLEST--VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLID 343
            +P +L S   V +   ++  G KH + +T +G++++WGEG  GKLGHG       PKL++
Sbjct: 1872 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 1931

Query: 344  ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
             LNG ++  +ACG  H+ A+T SG + TWG G    G LG         P+ V   + G 
Sbjct: 1932 HLNGMSVADIACGSAHSAAITASGHVLTWGKG--RYGRLGHGDSEDQLRPKLVEALL-GY 1988

Query: 404  QISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
            +   I CG     T  IT    ++++GDG +G LG G      +P ++E+L  L  V   
Sbjct: 1989 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVE 2048

Query: 462  CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
            CG   + A+ +            S  ++TWG G   +LGHG  +    P  V        
Sbjct: 2049 CGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 2096

Query: 522  CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
              +A G    +A + +G+V++ G  D GQLG    T     R+   ++ ++I  + CGS 
Sbjct: 2097 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 2156

Query: 582  HIAVVSS 588
            H   +S+
Sbjct: 2157 HTLALST 2163



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 144/287 (50%), Gaps = 27/287 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G+V+ WGEG  +G LG   +G  +S  DR     PK++E    +    IACGS H+  +T
Sbjct: 1903 GEVYAWGEG-EDGKLG---HGNRMSY-DR-----PKLVEHLNGMSVADIACGSAHSAAIT 1952

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
              G + +WG+G  G+LGHG   D   PKL++AL G     +ACG  +  T  +T   +++
Sbjct: 1953 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 2012

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+       +P K+   + GL +  + CG   + A+T +G ++T+G G
Sbjct: 2013 SWGDG--DYGKLGRGGSDGCKLPYKIE-SLAGLGVVKVECGSQFSVALTKSGAVYTWGKG 2069

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             F  LGHG       P++V  L+  K +  + G  H  A  +            S +++T
Sbjct: 2070 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSD------------SGEVYT 2117

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
            WGD  EGQLG G       P  V         KV CG + T+AL+ +
Sbjct: 2118 WGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 2164



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/156 (38%), Positives = 83/156 (53%), Gaps = 2/156 (1%)

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATGQVFSMG 544
           K++  G+G  G+LG G      +P  + V       KVA   G    +ALT  G+VFS G
Sbjct: 785 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWG 844

Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
             + G+LG    T     R+   ++ + I D+ACGS H A +SS+ E+YTWG G  G+LG
Sbjct: 845 EGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLG 904

Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           HGDN  +  P LV AL  ++V  V CGS     + L
Sbjct: 905 HGDNATQLKPKLVTALAGRRVVQVACGSRDAQTLAL 940



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            A  ++ +G    G LG  + S    P   E L  L+ V  + G     A+          
Sbjct: 1796 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT--------- 1846

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
                  KLF  G G+ G+LG G ++   +P  +     +   KVA   G    +ALT  G
Sbjct: 1847 ---PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 1903

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V++ G  + G+LG          ++  ++    + DIACGS H A +++   V TWGKG
Sbjct: 1904 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKG 1963

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++  P LVEAL   +   + CGS     +C+
Sbjct: 1964 RYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCI 2005



 Score = 43.9 bits (102), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 2/102 (1%)

Query: 540 VFSMGSADYGQLGS-PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           V   G  D  QLG   GS  K PT  +   + R I  IA GS  + +VS   +VY  G+G
Sbjct: 734 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIH-IAGGSKSLFIVSQDGKVYACGEG 792

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            NG+LG G   N   P  +  L    VK V   S    A+ L
Sbjct: 793 TNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL 834


>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
 gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
          Length = 3840

 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 191/391 (48%), Gaps = 37/391 (9%)

Query: 255  VFIWG----EGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            V +WG    E LG GL G  V              +P   ++   L    IA GSK   +
Sbjct: 1834 VMVWGLNDKEQLG-GLKGSKVK-------------VPTFSQTISRLRPIHIAGGSKSLFI 1879

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            V + G++++ GEG+ G+LG GV  +V  P  +  L+   +  VA   G  H  A+TL G 
Sbjct: 1880 VGQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGK 1939

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +++WG+G    G LG  +  +   PR V   +   +I  + CG  H+AAI+S G+L+T+G
Sbjct: 1940 VFSWGEG--EDGKLGHGNRTTLDKPRLVE-TLRSKKIRDVACGSSHSAAISSQGELYTWG 1996

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV--WHTAAIVEVAGKTSGSNGLSSK 486
             G +G LGHGD ++   P+ V  L   + +  +CG     T A+ E      GS      
Sbjct: 1997 LGEYGRLGHGDNATQLKPKLVAALAGRRVIQVACGSRDAQTLALTE-----DGS------ 2045

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +F+WGDG  G+LG G +E    P  ++    I   ++ CG   ++ALT  G+V++ G  
Sbjct: 2046 -VFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKG 2104

Query: 547  DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            DY +LG  G       +  G ++ R +  +A G+ H   V+   +VY WG   +GQ G G
Sbjct: 2105 DYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 2164

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            +    + P LV  L    V  V CGS+ + A
Sbjct: 2165 NTFVNKKPALVIGLDAVFVNRVACGSSHSIA 2195



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 127/394 (32%), Positives = 193/394 (48%), Gaps = 29/394 (7%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            + G   ++ WG     G LGG + G  I +        P   E+  +L    +A G +  
Sbjct: 2973 WGGASTIYGWGHN-HRGQLGG-LEGSRIKT--------PTPCEALSLLRPVQLAGGEQSL 3022

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT  G++F+ G GSGG+LG G     + P L+ +L    +  VA   G  H  A+T  
Sbjct: 3023 FAVTPDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 3082

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G++Y WG+G    G LG  + +S+  P+ V   + G+ ++ I CG  H+AAIT++G + T
Sbjct: 3083 GEVYAWGEG--EDGKLGHGNRMSYDRPKLVE-HLNGMNVADIACGSAHSAAITASGHVLT 3139

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+ VE L   + +  +CG          +G           
Sbjct: 3140 WGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACG----------SGDAQTLCITDDD 3189

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   +P  ++    +   KV CG   ++ALT +G V++    
Sbjct: 3190 NVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKG 3249

Query: 547  DYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
            D+ +LG  GS    + P ++   ++ + I  IA GS H    S   EVYTWG    GQLG
Sbjct: 3250 DFHRLGH-GSVDHVRRPKKVAA-LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG 3307

Query: 605  HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G     Q P LV AL+ K +  V CGS  T A+
Sbjct: 3308 DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 3341



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 147/307 (47%), Gaps = 19/307 (6%)

Query: 286  LPKVLEST--VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLID 343
            +P +L S   V +   ++  G KH + +T +G++++WGEG  GKLGHG       PKL++
Sbjct: 3052 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 3111

Query: 344  ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
             LNG N+  +ACG  H+ A+T SG + TWG G    G LG         P+ V   + G 
Sbjct: 3112 HLNGMNVADIACGSAHSAAITASGHVLTWGKG--RYGRLGHGDSEDQLRPQLVEALL-GY 3168

Query: 404  QISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
            +   I CG     T  IT    ++++GDG +G LG G      +P ++E+L  L  +   
Sbjct: 3169 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 3228

Query: 462  CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
            CG   + A+ +            S  ++TW  G   +LGHG  +    P  V        
Sbjct: 3229 CGSQFSVALTK------------SGAVYTWSKGDFHRLGHGSVDHVRRPKKVAALQGKKI 3276

Query: 522  CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
              +A G    +A + +G+V++ G  D GQLG    T     R+   ++ ++I  + CGS 
Sbjct: 3277 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 3336

Query: 582  HIAVVSS 588
            H   +S+
Sbjct: 3337 HTLALST 3343



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 144/287 (50%), Gaps = 27/287 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G+V+ WGEG  +G LG   +G  +S  DR     PK++E    ++   IACGS H+  +T
Sbjct: 3083 GEVYAWGEG-EDGKLG---HGNRMSY-DR-----PKLVEHLNGMNVADIACGSAHSAAIT 3132

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
              G + +WG+G  G+LGHG   D   P+L++AL G     +ACG  +  T  +T   +++
Sbjct: 3133 ASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 3192

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+       +P K+   + GL +  + CG   + A+T +G ++T+  G
Sbjct: 3193 SWGDG--DYGKLGRGGSDGCKLPYKIE-SLAGLGVIKVECGSQFSVALTKSGAVYTWSKG 3249

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             F  LGHG       P++V  L+  K +  + G  H  A  +            S +++T
Sbjct: 3250 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSD------------SGEVYT 3297

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
            WGD  EGQLG G       P  V         KV CG + T+AL+ +
Sbjct: 3298 WGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 3344



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/170 (37%), Positives = 89/170 (52%), Gaps = 6/170 (3%)

Query: 479  GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTA 536
            G NG    K++  G+G  G+LG G      +P  + V       KVA   G    +ALT 
Sbjct: 1881 GQNG----KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTL 1936

Query: 537  TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
             G+VFS G  + G+LG    T     R+   ++ + I D+ACGS H A +SS+ E+YTWG
Sbjct: 1937 DGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWG 1996

Query: 597  KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSI 646
             G  G+LGHGDN  +  P LV AL  ++V  V CGS     + L +  S+
Sbjct: 1997 LGEYGRLGHGDNATQLKPKLVAALAGRRVIQVACGSRDAQTLALTEDGSV 2046



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 103/222 (46%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            A  ++ +G    G LG  + S    P   E L  L+ V  + G     A+          
Sbjct: 2976 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT--------- 3026

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
                  KLF  G G+ G+LG G A+   +P  +     +   KVA   G    +ALT  G
Sbjct: 3027 ---PDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 3083

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V++ G  + G+LG          ++  ++    + DIACGS H A +++   V TWGKG
Sbjct: 3084 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKG 3143

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++  P LVEAL   +   + CGS     +C+
Sbjct: 3144 RYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCI 3185


>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
            pisum]
          Length = 4404

 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 124/387 (32%), Positives = 192/387 (49%), Gaps = 29/387 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            V++WG     G LGG +NG ++          P   E+   L    I  GSK   +V+ +
Sbjct: 2595 VYVWGLN-DKGQLGG-LNGSKVKR--------PTFNEALTALKPIEIVGGSKSLFIVSNE 2644

Query: 315  GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTW 372
            G++F  G+ SGG+LG      VS P+ I  L+   I  VA   G  H  A++L G + +W
Sbjct: 2645 GKVFVCGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDGKVLSW 2704

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            GDG    G LG    ++   P+ +   +   ++  I CG  H+AAITS G+L+T+G G +
Sbjct: 2705 GDG--EDGKLGHGDILTLDTPKLIDSLLAK-RVFYIACGSAHSAAITSDGELYTWGQGQY 2761

Query: 433  GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTW 491
            G LGH D  S   P+ V+          +CG            + + +  L S+  +++W
Sbjct: 2762 GRLGHSDEVSQHTPKLVKEFVGKNITQVACG-----------SRDAQTLALDSEGNVYSW 2810

Query: 492  GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
            GDG  G+LG G ++    P  V+        ++ CG   ++ALTATGQV++ G  +Y +L
Sbjct: 2811 GDGDFGKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKGEYYRL 2870

Query: 552  G-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            G   G   + PT +   +K   I+ IA G+ H   VS++ +VY WG   +GQ G+G    
Sbjct: 2871 GLGRGEHVRRPTLV-NQLKLVTIDHIAVGTLHCIAVSTQGDVYCWGDNDHGQQGNGTTNA 2929

Query: 611  KQTPTLVEALRDKQVKSVVCGSNFTAA 637
             Q P LV    + ++  V CGS+ + A
Sbjct: 2930 NQEPRLVTNFNNIKINRVGCGSSQSIA 2956



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 111/383 (28%), Positives = 179/383 (46%), Gaps = 29/383 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            V++WG            +  +++  D      P   +S  VL    +  G +    VT  
Sbjct: 3546 VYVWGHN----------HRGQLACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVTSY 3595

Query: 315  GQIFSWGEGSGGKLGHGV----EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
            G++++ G    G+LG G        V  P+L+  LN      V  G  H  A++ +G++Y
Sbjct: 3596 GKVYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVY 3655

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
             WGDG  + G LG  + ++H  P+ V   +    I  I CG +H+AAI+  G L+T+G G
Sbjct: 3656 AWGDG--DDGKLGLGNRVTHSKPQLVQS-LSDKCIIDIACGGFHSAAISRYGHLYTWGKG 3712

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGHGD      P+ V+ L     V  +CG          +G        S   +++
Sbjct: 3713 RYGRLGHGDYEDYLYPKLVQGLINYHVVKVACG----------SGDAQTMCVTSDDNVWS 3762

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LGH  +E   +P  ++        ++ CG   ++AL+A G +++ G  DY +
Sbjct: 3763 WGDGDYGKLGHNISESCKLPCKIESLSGKGIIQIDCGSQFSVALSANGTLYTWGKGDYFR 3822

Query: 551  LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG   S   + P  + G ++ + I   + GS H+  ++   EVY WG    GQLG G   
Sbjct: 3823 LGHGSSEHVRKPKPVSG-LQGKKIVQFSTGSLHVLALTDDGEVYAWGDNDEGQLGDGTAH 3881

Query: 610  NKQTPTLVEALRDKQVKSVVCGS 632
                P  + AL+ K+++ V CGS
Sbjct: 3882 PIARPRPIAALKGKRIQQVSCGS 3904



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 161/330 (48%), Gaps = 25/330 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF+ G+  G G LG    G ++SS  +   L      S  V+   ++  G KHA+ ++
Sbjct: 2645 GKVFVCGDSSG-GRLGIPFCG-KVSSPRQIPGL------SQFVIKTVAVHSGGKHAMALS 2696

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
              G++ SWG+G  GKLGHG    +  PKLID+L    +  +ACG  H+ A+T  G+LYTW
Sbjct: 2697 LDGKVLSWGDGEDGKLGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGELYTW 2756

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDG 430
            G G +  G LG   E+S   P+ V  +  G  I+ + CG     T A+ S G ++++GDG
Sbjct: 2757 GQGQY--GRLGHSDEVSQHTPKLVK-EFVGKNITQVACGSRDAQTLALDSEGNVYSWGDG 2813

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             FG LG G       P++VE L   + V   CG   + A+             ++ +++T
Sbjct: 2814 DFGKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALT------------ATGQVWT 2861

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WG G   +LG G  E    P  V     ++   +A G    IA++  G V+  G  D+GQ
Sbjct: 2862 WGKGEYYRLGLGRGEHVRRPTLVNQLKLVTIDHIAVGTLHCIAVSTQGDVYCWGDNDHGQ 2921

Query: 551  LGSPGSTGKFPTRIEGNIKHRYIEDIACGS 580
             G+  +      R+  N  +  I  + CGS
Sbjct: 2922 QGNGTTNANQEPRLVTNFNNIKINRVGCGS 2951



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 164/337 (48%), Gaps = 25/337 (7%)

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
            + V  +  ++ WG    G+LG    + V  P   +AL       +  G      V+  G 
Sbjct: 2587 IRVDSEYAVYVWGLNDKGQLGGLNGSKVKRPTFNEALTALKPIEIVGGSKSLFIVSNEGK 2646

Query: 369  LYTWGD---GIHNLGLLGQVSEISHWIPRKVSGQMEG-LQISSICCGPWHTAAITSAGKL 424
            ++  GD   G   +   G+VS      PR++ G  +  ++  ++  G  H  A++  GK+
Sbjct: 2647 VFVCGDSSGGRLGIPFCGKVSS-----PRQIPGLSQFVIKTVAVHSGGKHAMALSLDGKV 2701

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
             ++GDG  G LGHGD  +   P+ +++L   +    +CG  H+AAI             S
Sbjct: 2702 LSWGDGEDGKLGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAIT------------S 2749

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFS 542
              +L+TWG G  G+LGH D   +  P  VK     +  +VACG   + T+AL + G V+S
Sbjct: 2750 DGELYTWGQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYS 2809

Query: 543  MGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
             G  D+G+LG  GS G   P ++E  + HR ++ I CG+     +++  +V+TWGKG   
Sbjct: 2810 WGDGDFGKLGRGGSDGCCTPQKVERLVGHRVVQ-IECGAQFSVALTATGQVWTWGKGEYY 2868

Query: 602  QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            +LG G  E+ + PTLV  L+   +  +  G+    A+
Sbjct: 2869 RLGLGRGEHVRRPTLVNQLKLVTIDHIAVGTLHCIAV 2905



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 162/327 (49%), Gaps = 19/327 (5%)

Query: 317  IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
            ++ WG    G+L     + V  P   D+L+      V  GE    AVT  G +Y  G   
Sbjct: 3546 VYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASGYTE 3605

Query: 377  HNLGLLGQVSEISHWI--PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
                 +G  +  + ++  P+ V G    ++++ +  G  H  A+++ G+++ +GDG  G 
Sbjct: 3606 SGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVA-VNSGGRHCLALSTTGEVYAWGDGDDGK 3664

Query: 435  LGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG 494
            LG G+R + S P+ V++L +   +  +CG +H+AAI                 L+TWG G
Sbjct: 3665 LGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAISRYG------------HLYTWGKG 3712

Query: 495  AEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQLG 552
              G+LGHGD E  + P  V+   +    KVACG   + T+ +T+   V+S G  DYG+LG
Sbjct: 3713 RYGRLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLG 3772

Query: 553  SPGS-TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
               S + K P +IE  +  + I  I CGS     +S+   +YTWGKG   +LGHG +E+ 
Sbjct: 3773 HNISESCKLPCKIES-LSGKGIIQIDCGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHV 3831

Query: 612  QTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + P  V  L+ K++     GS    A+
Sbjct: 3832 RKPKPVSGLQGKKIVQFSTGSLHVLAL 3858



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 138/283 (48%), Gaps = 27/283 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G+V+ WG+G  +G LG   N V  S        L + L    ++D   IACG  H+  ++
Sbjct: 3652 GEVYAWGDG-DDGKLGLG-NRVTHSKPQ-----LVQSLSDKCIID---IACGGFHSAAIS 3701

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
            + G +++WG+G  G+LGHG   D  YPKL+  L   ++  VACG  +  T  VT   +++
Sbjct: 3702 RYGHLYTWGKGRYGRLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVW 3761

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG     S  +P K+   + G  I  I CG   + A+++ G L+T+G G
Sbjct: 3762 SWGDG--DYGKLGHNISESCKLPCKIES-LSGKGIIQIDCGSQFSVALSANGTLYTWGKG 3818

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +  LGHG       P+ V  L+  K V  S G  H  A+ +              +++ 
Sbjct: 3819 DYFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTD------------DGEVYA 3866

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
            WGD  EGQLG G A P   P  +         +V+CG + + A
Sbjct: 3867 WGDNDEGQLGDGTAHPIARPRPIAALKGKRIQQVSCGSAHSFA 3909



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 101/221 (45%), Gaps = 16/221 (7%)

Query: 424  LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
            ++ +G    G L   D S    P   ++L  LK                + G+ +     
Sbjct: 3546 VYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKPTQV------------IGGEQTMFAVT 3593

Query: 484  SSKKLFTWGDGAEGQLGHGDAEPR----VVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
            S  K++  G    G+LG G   P+    V P  V+  ++I    V  G    +AL+ TG+
Sbjct: 3594 SYGKVYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTTGE 3653

Query: 540  VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
            V++ G  D G+LG          ++  ++  + I DIACG +H A +S    +YTWGKG 
Sbjct: 3654 VYAWGDGDDGKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAISRYGHLYTWGKGR 3713

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
             G+LGHGD E+   P LV+ L +  V  V CGS     +C+
Sbjct: 3714 YGRLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCV 3754



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 130/308 (42%), Gaps = 42/308 (13%)

Query: 338 YP----KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           YP    K+I  L   ++  V C       VT SG L+     I +L    +         
Sbjct: 437 YPETKKKVILTLERLHVESVVCSRNEILVVTTSGTLHFISYSIDSLNFEEK--------- 487

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETL 452
                QM  + + S+        A+T  G+++++G   FGALGHG + SS   P  +   
Sbjct: 488 -----QMMNVPMKSVDVYDETYLAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAF 542

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC 512
            +L  VM SCG    AA+ E              KL+ WG     ++ H  +     P  
Sbjct: 543 SKLIVVMVSCGKDFCAAVTE------------DGKLYMWG-----KILHS-SNCCYTPEL 584

Query: 513 VKVSDDISFCKVACGHSI--TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH 570
           VK   +    KV+CG SI  T+AL+  G VFS    +  +     S    P+ I  + + 
Sbjct: 585 VKSISEWHVSKVSCGSSINNTLALSREGYVFSFEYRNSDRGCDDKSLNVIPSMIVFDYE- 643

Query: 571 RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
             I  I C +   AV+   + V+TWG+G N  LGH ++     P  V+ L  KQV S+  
Sbjct: 644 --IVSIYCHNDVNAVIDCANNVFTWGRGNNNMLGHNNSFRVNRPKEVKFLSGKQVTSLSL 701

Query: 631 GSNFTAAI 638
             ++  A+
Sbjct: 702 ADDYILAL 709



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 119/274 (43%), Gaps = 41/274 (14%)

Query: 311 VTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
           VT++G+++SWG    G LGHG + +    P+ I A +   + MV+CG+    AVT  G L
Sbjct: 507 VTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAVTEDGKL 566

Query: 370 YTWGDGIHNLGLLGQ---VSEISHWIPRKVSGQMEGLQISSICCGPW--HTAAITSAGKL 424
           Y WG  +H+         V  IS W             +S + CG    +T A++  G +
Sbjct: 567 YMWGKILHSSNCCYTPELVKSISEW------------HVSKVSCGSSINNTLALSREGYV 614

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           F+F +      G  D+S   +P  +    E+ ++     V    A+++ A          
Sbjct: 615 FSF-EYRNSDRGCDDKSLNVIPSMIVFDYEIVSIYCHNDV---NAVIDCANN-------- 662

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
              +FTWG G    LGH ++     P  VK         ++      +ALT TGQV+   
Sbjct: 663 ---VFTWGRGNNNMLGHNNSFRVNRPKEVKFLSGKQVTSLSLADDYILALTDTGQVYC-- 717

Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIAC 578
              +GQL +  +T   P +   N   R ++ IAC
Sbjct: 718 ---WGQLDNENTTQCRPVKCLMN---RQVKKIAC 745



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 3/108 (2%)

Query: 269 GAVNGVEISSADRR-DALLPKVLESTVVLDAQ--SIACGSKHAVLVTKQGQIFSWGEGSG 325
           G V   E  ++DR  D     V+ S +V D +  SI C +    ++     +F+WG G+ 
Sbjct: 612 GYVFSFEYRNSDRGCDDKSLNVIPSMIVFDYEIVSIYCHNDVNAVIDCANNVFTWGRGNN 671

Query: 326 GKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
             LGH     V+ PK +  L+G  +  ++  + +  A+T +G +Y WG
Sbjct: 672 NMLGHNNSFRVNRPKEVKFLSGKQVTSLSLADDYILALTDTGQVYCWG 719



 Score = 46.6 bits (109), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 7/112 (6%)

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPT-RIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           +A+T  G+V+S G  ++G LG       FPT           +  ++CG    A V+   
Sbjct: 505 LAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAVTEDG 564

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHK 642
           ++Y WGK     + H  N    TP LV+++ +  V  V CGS+    + L +
Sbjct: 565 KLYMWGK-----ILHSSN-CCYTPELVKSISEWHVSKVSCGSSINNTLALSR 610


>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
            queenslandica]
          Length = 4694

 Score =  173 bits (439), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/392 (31%), Positives = 200/392 (51%), Gaps = 37/392 (9%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVV--LDAQSIACGSKHAVLVT 312
            VF+WG           +N +     D  +A +   +ES  +  L     A GSK + +V+
Sbjct: 2926 VFVWG-----------LNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVS 2974

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA--CGEFHTCAVTLSGDLY 370
              G++F+ GEGS G+LG G  A++  P  I +L+   +  VA  C   H  AVT  G ++
Sbjct: 2975 DDGKVFACGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVF 3034

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG    G LG  S  S+  P+ +    +   I  + CG  H+AA++  G+LFT+G G
Sbjct: 3035 SWGDG--QYGQLGHGSLQSYDRPKMIE-IFQAKHIREVSCGTGHSAAVSVNGELFTWGQG 3091

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGV--WHTAAIVEVAGKTSGSNGLSSKKL 488
              G LGHGD ++ + P+ V  L++++    +CG    HT A    AG  S         L
Sbjct: 3092 ADGRLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLA----AGDNS---------L 3138

Query: 489  FTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
            + WGDG+ G+LG  D      VP+ V ++   +  ++ CG   ++ LT  G+V++ G  +
Sbjct: 3139 WAWGDGSFGKLGLKDGSSSTDVPVQV-ITFPSNIIQIECGMHFSVLLTKEGKVYTWGKGE 3197

Query: 548  YGQLGSPG-STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            Y +LG+   S    PT ++G +  + I  +A G+ H   ++S  EVY+WG   +GQ G+ 
Sbjct: 3198 YYRLGNDSTSVQPIPTLVDG-LASKTITQVAVGALHCLALTSSGEVYSWGDNEHGQQGNN 3256

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
                 + P +V +L+  ++  + CGS+ + A 
Sbjct: 3257 STICNRKPQIVASLKGHRICKIACGSSHSIAF 3288



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 180/388 (46%), Gaps = 28/388 (7%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF WG     G LGG + G ++ S        P++ ES   L+   I  G +    VT  
Sbjct: 3836 VFGWGHN-HRGQLGG-IEGNKVKS--------PRLCESLSELNPAMITGGEQTLFAVTDD 3885

Query: 315  GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM----VACGEFHTCAVTLSGDLY 370
            G++++ G  + G+LG G   +V+ P  + +L    I +    +  G  H  AVT  G+LY
Sbjct: 3886 GKVYASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELY 3945

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
             WG+G    G LG  + ++  +P  +   ++   +    CG  H+A IT  G L+T+G G
Sbjct: 3946 AWGEG--EDGKLGLGTTVNMNVPHLIES-LKSKHVIDAGCGSSHSACITDDGSLYTWGKG 4002

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             +G LGH D  +   P+ V  LK  +    +CG          +G        +S  +F+
Sbjct: 4003 RYGRLGHNDHETQHKPKLVSALKGEQVTCVACG----------SGDAQTLCATASGCVFS 4052

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G  E   VP  +         K+ CG   ++ALT  G V++ G  DY +
Sbjct: 4053 WGDGDYGKLGRGGNEGSKVPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYR 4112

Query: 551  LG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG    S  + P R+ G + H  + DI CGS H  V +   +V++WG    GQ+G+   +
Sbjct: 4113 LGHGDDSHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTESGKVFSWGDNDEGQIGNDTTQ 4172

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                P  +    +  +  V CGS  + A
Sbjct: 4173 AVSVPKRINITDNICIDHVACGSAHSIA 4200



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/334 (33%), Positives = 168/334 (50%), Gaps = 23/334 (6%)

Query: 317  IFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
            +F WG    G+LG G+E + V  P+L ++L+  N  M+  GE    AVT  G +Y  G  
Sbjct: 3836 VFGWGHNHRGQLG-GIEGNKVKSPRLCESLSELNPAMITGGEQTLFAVTDDGKVYASGYA 3894

Query: 376  IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC--GPWHTAAITSAGKLFTFGDGTFG 433
             H    +G    ++   P   S    G+ +  I    G  H  A+T+ G+L+ +G+G  G
Sbjct: 3895 AHGRLGIGSSDNVATPTPL-TSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGEDG 3953

Query: 434  ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
             LG G   + +VP  +E+LK    + A CG  H+A I +      GS       L+TWG 
Sbjct: 3954 KLGLGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACITD-----DGS-------LYTWGK 4001

Query: 494  GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQL 551
            G  G+LGH D E +  P  V          VACG   + T+  TA+G VFS G  DYG+L
Sbjct: 4002 GRYGRLGHNDHETQHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKL 4061

Query: 552  GSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            G  G+ G K P +I+ ++  +++  + CGS     +++   VYTWGKG   +LGHGD+ +
Sbjct: 4062 GRGGNEGSKVPKKID-SLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDDSH 4120

Query: 611  KQTPTLVEA-LRDKQVKSVVCGSNFTAAICLHKG 643
            ++TP  V   L  + V  + CGS     +C   G
Sbjct: 4121 QRTPRRVLGLLAHENVIDIGCGS-LHCIVCTESG 4153



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 99/297 (33%), Positives = 153/297 (51%), Gaps = 26/297 (8%)

Query: 300  SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
            +I  G KH + VT QG++++WGEG  GKLG G   +++ P LI++L   ++    CG  H
Sbjct: 3927 AIHSGGKHCLAVTTQGELYAWGEGEDGKLGLGTTVNMNVPHLIESLKSKHVIDAGCGSSH 3986

Query: 360  TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAA 417
            +  +T  G LYTWG G    G LG     +   P+ VS  ++G Q++ + CG     T  
Sbjct: 3987 SACITDDGSLYTWGKG--RYGRLGHNDHETQHKPKLVSA-LKGEQVTCVACGSGDAQTLC 4043

Query: 418  ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
             T++G +F++GDG +G LG G    + VP+++++L     +   CG   + A+      T
Sbjct: 4044 ATASGCVFSWGDGDYGKLGRGGNEGSKVPKKIDSLTGKHVIKLLCGSQFSMALT-----T 4098

Query: 478  SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP---LCVKVSDDISFCKVACGHSITIAL 534
            +G        ++TWG G   +LGHGD   +  P   L +   +++    + CG    I  
Sbjct: 4099 AG-------HVYTWGKGDYYRLGHGDDSHQRTPRRVLGLLAHENV--IDIGCGSLHCIVC 4149

Query: 535  TATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRY-IEDIACGSYHIAVVSSK 589
            T +G+VFS G  D GQ+G+  +     P RI  NI     I+ +ACGS H    SSK
Sbjct: 4150 TESGKVFSWGDNDEGQIGNDTTQAVSVPKRI--NITDNICIDHVACGSAHSIAWSSK 4204



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 144/285 (50%), Gaps = 30/285 (10%)

Query: 253  GDVFIWGEGLGNGL-LGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
            G+++ WGEG    L LG  VN             L + L+S  V+DA    CGS H+  +
Sbjct: 3942 GELYAWGEGEDGKLGLGTTVN--------MNVPHLIESLKSKHVIDA---GCGSSHSACI 3990

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDL 369
            T  G +++WG+G  G+LGH        PKL+ AL G  +  VAC  G+  T   T SG +
Sbjct: 3991 TDDGSLYTWGKGRYGRLGHNDHETQHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCV 4050

Query: 370  YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
            ++WGDG  + G LG+       +P+K+   + G  +  + CG   + A+T+AG ++T+G 
Sbjct: 4051 FSWGDG--DYGKLGRGGNEGSKVPKKIDS-LTGKHVIKLLCGSQFSMALTTAGHVYTWGK 4107

Query: 430  GTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
            G +  LGHGD S    PR V  L   + V+   CG  H     E            S K+
Sbjct: 4108 GDYYRLGHGDDSHQRTPRRVLGLLAHENVIDIGCGSLHCIVCTE------------SGKV 4155

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
            F+WGD  EGQ+G+   +   VP  + ++D+I    VACG + +IA
Sbjct: 4156 FSWGDNDEGQIGNDTTQAVSVPKRINITDNICIDHVACGSAHSIA 4200



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/334 (32%), Positives = 168/334 (50%), Gaps = 30/334 (8%)

Query: 253  GDVFIWGEGLGNGL-LGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
            G VF  GEG    L +GG  N   I    +  +L      S  V+   +++C  +H + V
Sbjct: 2977 GKVFACGEGSSGRLGIGGFAN---IRMPHQISSL------SMYVVRKVAVSCAGRHVLAV 3027

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T  G++FSWG+G  G+LGHG       PK+I+     +I  V+CG  H+ AV+++G+L+T
Sbjct: 3028 TADGKVFSWGDGQYGQLGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFT 3087

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGK--LFTFGD 429
            WG G    G LG     +   P+ V   +E ++IS + CG    A   +AG   L+ +GD
Sbjct: 3088 WGQGAD--GRLGHGDSNNQTKPKLVRA-LEKVRISCVACGS-RNAHTLAAGDNSLWAWGD 3143

Query: 430  GTFGALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
            G+FG LG  D  SST VP +V T      +   CG+ H + ++   G           K+
Sbjct: 3144 GSFGKLGLKDGSSSTDVPVQVITFPS-NIIQIECGM-HFSVLLTKEG-----------KV 3190

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            +TWG G   +LG+     + +P  V      +  +VA G    +ALT++G+V+S G  ++
Sbjct: 3191 YTWGKGEYYRLGNDSTSVQPIPTLVDGLASKTITQVAVGALHCLALTSSGEVYSWGDNEH 3250

Query: 549  GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
            GQ G+  +      +I  ++K   I  IACGS H
Sbjct: 3251 GQQGNNSTICNRKPQIVASLKGHRICKIACGSSH 3284



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 124/228 (54%), Gaps = 15/228 (6%)

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           H  A+T  GK++++G G+ G LG G+  S + P  V  L   + V  S G  H+AA+ E 
Sbjct: 519 HILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTE- 577

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSIT 531
                  +G+    L+TWG G+ G+LGHG+AE +++P  V+  + +   +V CG   + T
Sbjct: 578 -------DGV----LYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHT 626

Query: 532 IALTATGQVFSMGSADYGQLGSPGS-TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           +AL  TGQV+S G  DYG+LG PGS   K P  I G      +  I CG+     ++   
Sbjct: 627 LALDDTGQVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDG 686

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           ++Y+WG G   QLGHG+ E+ + P L+E L +  V  V  G+    A+
Sbjct: 687 KLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVAL 734



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 173/356 (48%), Gaps = 31/356 (8%)

Query: 287 PKVLESTVVL---DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLID 343
           P +++++ +L    A+      KH V++T  G +F   + S   +G      + +P   +
Sbjct: 451 PSIIQTSNILLEIGAKEFYSSPKHRVVLTVHGTVFYVMDAS---MGDFTVEQLFFPGDEE 507

Query: 344 ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
            +    I     G  H  A+T  G +Y+WG G +  G+LG  +  S   P  V+  + G 
Sbjct: 508 IIQ---IDHNPSGN-HILALTKDGKVYSWGQGSN--GVLGIGNTESQTAPTAVAA-LSGD 560

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
           +I  I  G  H+AA+T  G L+T+G G++G LGHG+     +P  VE L  +K V   CG
Sbjct: 561 RIVHISAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCG 620

Query: 464 V--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK-VSDDIS 520
               HT A+ +              ++++WGDG  G+LG   ++   VP  +  +     
Sbjct: 621 SGDAHTLALDDTG------------QVWSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSP 668

Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACG 579
             K+ CG+ I++ALT  G+++S G  D  QLG       + P  IEG +    + D++ G
Sbjct: 669 VVKIICGNQISMALTKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEG-LSETVVSDVSVG 727

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           + H   +++ S+VY WGK ++ ++     +   +P ++EA   K    + CG++ T
Sbjct: 728 AQHCVALTTDSDVYAWGKNSSFEVNES-GDIISSPLMIEAASGKGALLIACGASET 782



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 137/291 (47%), Gaps = 19/291 (6%)

Query: 307 HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
           H + +TK G+++SWG+GS G LG G     + P  + AL+G  I  ++ G  H+ AVT  
Sbjct: 519 HILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTED 578

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKL 424
           G LYTWG G  + G LG  +     IP  V G + G++I  + CG    HT A+   G++
Sbjct: 579 GVLYTWGKG--SYGRLGHGNAEDKLIPTIVEG-LNGVKIVQVDCGSGDAHTLALDDTGQV 635

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           +++GDG +G LG        VP+ +             G+  T+ +V++      S  L+
Sbjct: 636 WSWGDGDYGKLGRPGSDQNKVPKPIS------------GIGSTSPVVKIICGNQISMALT 683

Query: 485 SK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
              KL++WG G   QLGHG+ E    P  ++   +     V+ G    +ALT    V++ 
Sbjct: 684 KDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAW 743

Query: 544 GSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
           G     ++   G     P  IE       +  IACG+    V  SKS   T
Sbjct: 744 GKNSSFEVNESGDIISSPLMIEAASGKGALL-IACGASETFVSFSKSPTPT 793



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 135/284 (47%), Gaps = 29/284 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G  NG+LG  +   E  +A       P  + +        I+ GS H+  VT
Sbjct: 527 GKVYSWGQG-SNGVLG--IGNTESQTA-------PTAVAALSGDRIVHISAGSMHSAAVT 576

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLY 370
           + G +++WG+GS G+LGHG   D   P +++ LNG  I  V C  G+ HT A+  +G ++
Sbjct: 577 EDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVW 636

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG+     + +P+ +SG      +  I CG   + A+T  GKL+++G G
Sbjct: 637 SWGDG--DYGKLGRPGSDQNKVPKPISGIGSTSPVVKIICGNQISMALTKDGKLYSWGCG 694

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
               LGHG++     P+ +E L E      S G  H  A+             +   ++ 
Sbjct: 695 DTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALT------------TDSDVYA 742

Query: 491 WGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
           WG  +  ++   GD      PL ++ +       +ACG S T  
Sbjct: 743 WGKNSSFEVNESGDIISS--PLMIEAASGKGALLIACGASETFV 784



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 113/224 (50%), Gaps = 29/224 (12%)

Query: 419  TSAGKLFTFGDGTFGALGHGDRSSTSV--PREVETLKELKTVMASCGVWHTAAIVEVAGK 476
            T   K+F +G      LG  D S   V  P E  TL  L  +             + AG 
Sbjct: 2921 THGNKVFVWGLNDMRQLG-TDLSEAKVKSPIESRTLARLHPI-------------QFAGG 2966

Query: 477  TSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVP-----LCVKVSDDISFCKVACGHSI 530
            +  S  +S   K+F  G+G+ G+LG G      +P     L + V   ++   V+C    
Sbjct: 2967 SKCSFVVSDDGKVFACGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVA---VSCAGRH 3023

Query: 531  TIALTATGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSS 588
             +A+TA G+VFS G   YGQLG  GS   +  P  IE   + ++I +++CG+ H A VS 
Sbjct: 3024 VLAVTADGKVFSWGDGQYGQLGH-GSLQSYDRPKMIE-IFQAKHIREVSCGTGHSAAVSV 3081

Query: 589  KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
              E++TWG+GA+G+LGHGD+ N+  P LV AL   ++  V CGS
Sbjct: 3082 NGELFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISCVACGS 3125



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 119/278 (42%), Gaps = 76/278 (27%)

Query: 253  GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            G VF WG+G    LG+G          + S DR     PK++E       + ++CG+ H+
Sbjct: 3031 GKVFSWGDGQYGQLGHG---------SLQSYDR-----PKMIEIFQAKHIREVSCGTGHS 3076

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLS 366
              V+  G++F+WG+G+ G+LGHG   + + PKL+ AL    I  VACG    HT A   +
Sbjct: 3077 AAVSVNGELFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAHTLA---A 3133

Query: 367  GD--LYTWGDG---------------------------------IHNLGLLGQVSEISHW 391
            GD  L+ WGDG                                 +H   LL +  ++  W
Sbjct: 3134 GDNSLWAWGDGSFGKLGLKDGSSSTDVPVQVITFPSNIIQIECGMHFSVLLTKEGKVYTW 3193

Query: 392  -----------------IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
                             IP  V G +    I+ +  G  H  A+TS+G+++++GD   G 
Sbjct: 3194 GKGEYYRLGNDSTSVQPIPTLVDG-LASKTITQVAVGALHCLALTSSGEVYSWGDNEHGQ 3252

Query: 435  LGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
             G+        P+ V +LK  +    +CG  H+ A  +
Sbjct: 3253 QGNNSTICNRKPQIVASLKGHRICKIACGSSHSIAFAQ 3290



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/312 (22%), Positives = 143/312 (45%), Gaps = 20/312 (6%)

Query: 332  VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD-LYTWG-DGIHNLGLLGQVSEIS 389
            V A+ S+  + DAL+    +M +       +    G+ ++ WG + +  LG     +++ 
Sbjct: 2888 VAANFSFLTVDDALDDDTNNMYSRRRLDLLSTDTHGNKVFVWGLNDMRQLGTDLSEAKVK 2947

Query: 390  HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV 449
              I  +   ++  +Q +    G   +  ++  GK+F  G+G+ G LG G  ++  +P ++
Sbjct: 2948 SPIESRTLARLHPIQFAG---GSKCSFVVSDDGKVFACGEGSSGRLGIGGFANIRMPHQI 3004

Query: 450  ETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR 507
             +L    ++ V  SC   H  A+             +  K+F+WGDG  GQLGHG  +  
Sbjct: 3005 SSLSMYVVRKVAVSCAGRHVLAVT------------ADGKVFSWGDGQYGQLGHGSLQSY 3052

Query: 508  VVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN 567
              P  +++       +V+CG   + A++  G++F+ G    G+LG   S  +   ++   
Sbjct: 3053 DRPKMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHGDSNNQTKPKLVRA 3112

Query: 568  IKHRYIEDIACGSYHIAVVSS-KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVK 626
            ++   I  +ACGS +   +++  + ++ WG G+ G+LG  D  +     +        + 
Sbjct: 3113 LEKVRISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDGSSSTDVPVQVITFPSNII 3172

Query: 627  SVVCGSNFTAAI 638
             + CG +F+  +
Sbjct: 3173 QIECGMHFSVLL 3184



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 82/159 (51%), Gaps = 5/159 (3%)

Query: 487  KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
            K+F WG     QLG   +E +V  P+  +    +   + A G   +  ++  G+VF+ G 
Sbjct: 2925 KVFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDDGKVFACGE 2984

Query: 546  ADYGQLGSPG-STGKFPTRIEGNIKHRYIEDIA--CGSYHIAVVSSKSEVYTWGKGANGQ 602
               G+LG  G +  + P +I  ++    +  +A  C   H+  V++  +V++WG G  GQ
Sbjct: 2985 GSSGRLGIGGFANIRMPHQI-SSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQ 3043

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
            LGHG  ++   P ++E  + K ++ V CG+  +AA+ ++
Sbjct: 3044 LGHGSLQSYDRPKMIEIFQAKHIREVSCGTGHSAAVSVN 3082



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 2/110 (1%)

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           +ALT  G+V+S G    G LG   +  +  PT +      R +  I+ GS H A V+   
Sbjct: 521 LALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVH-ISAGSMHSAAVTEDG 579

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWGKG+ G+LGHG+ E+K  PT+VE L   ++  V CGS     + L
Sbjct: 580 VLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLAL 629



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 17/112 (15%)

Query: 532 IALTATGQVF-----SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
           + LT  G VF     SMG     QL  PG         E  I+   I+    G+ HI  +
Sbjct: 476 VVLTVHGTVFYVMDASMGDFTVEQLFFPGD--------EEIIQ---IDHNPSGN-HILAL 523

Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +   +VY+WG+G+NG LG G+ E++  PT V AL   ++  +  GS  +AA+
Sbjct: 524 TKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAV 575


>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
 gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
          Length = 5072

 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 126/392 (32%), Positives = 191/392 (48%), Gaps = 39/392 (9%)

Query: 255  VFIWG----EGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            V +WG    E LG GL G  V              +P   ++   L    IA GSK   +
Sbjct: 3097 VMVWGLNDKEQLG-GLKGSKVK-------------VPTFSQTISRLRPIHIAGGSKSLFI 3142

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            V + G++++ GEG+ G+LG GV  +V  P  +  L+   +  VA   G  H  A+TL G 
Sbjct: 3143 VGQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGK 3202

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +++WG+G    G LG  +  +   PR V   +   +I  + CG  H+AAI+S G+L+T+G
Sbjct: 3203 VFSWGEG--EDGKLGHGNRTTLDKPRLVE-TLRSKKIRDVACGSSHSAAISSQGELYTWG 3259

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV--WHTAAIVEVAGKTSGSNGLSSK 486
             G +G LGHGD S+   P+ V  L   + +  +CG     T A+ E              
Sbjct: 3260 LGEYGRLGHGDNSTQLKPKLVAALAGRRVIQVACGSRDAQTLALTE------------DG 3307

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +F+WGDG  G+LG G +E    P  ++    I   ++ CG   ++ALT  G+V++ G  
Sbjct: 3308 AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKG 3367

Query: 547  DYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
            DY +LG  G    + P  I G ++ R +  +A G+ H   V+   +VY WG   +GQ G 
Sbjct: 3368 DYYRLGHGGDQHVRKPQPIAG-LRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGS 3426

Query: 606  GDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            G+    + P LV  L    V  V CGS+ + A
Sbjct: 3427 GNTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3458



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 128/394 (32%), Positives = 194/394 (49%), Gaps = 29/394 (7%)

Query: 249  FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            + G   ++ WG     G LGG + G  I +        P   E+  +L    +A G +  
Sbjct: 4232 WGGASTIYGWGHN-HRGQLGG-LEGSRIKT--------PTPCEALSLLRPVQLAGGEQSL 4281

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
              VT  G++F+ G GSGG+LG G     + P L+ +L    +  VA   G  H  A+T  
Sbjct: 4282 FAVTPDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 4341

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G++Y WG+G    G LG  + +S+  P+ V   + G+ ++ I CG  H+AAIT++G + T
Sbjct: 4342 GEVYAWGEG--EDGKLGHGNRMSYDRPKLVE-HLNGMNVADIACGSAHSAAITASGHVLT 4398

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G G +G LGHGD      P+ VE L   + +  +CG          +G           
Sbjct: 4399 WGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACG----------SGDAQTLCINDDD 4448

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WGDG  G+LG G ++   +P  ++    +   KV CG   ++ALT +G V++ G  
Sbjct: 4449 NVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4508

Query: 547  DYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
            D+ +LG  GS    + P ++   ++ + I  IA GS H    S   EVYTWG    GQLG
Sbjct: 4509 DFHRLGH-GSVDHVRRPKKVAA-LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG 4566

Query: 605  HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G     Q P LV AL+ K +  V CGS  T A+
Sbjct: 4567 DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4600



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 148/307 (48%), Gaps = 19/307 (6%)

Query: 286  LPKVLEST--VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLID 343
            +P +L S   V +   ++  G KH + +T +G++++WGEG  GKLGHG       PKL++
Sbjct: 4311 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 4370

Query: 344  ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
             LNG N+  +ACG  H+ A+T SG + TWG G +  G LG         P+ V   + G 
Sbjct: 4371 HLNGMNVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPQLVEALL-GY 4427

Query: 404  QISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
            +   I CG     T  I     ++++GDG +G LG G      +P ++E+L  L  +   
Sbjct: 4428 RAIDIACGSGDAQTLCINDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVIKVE 4487

Query: 462  CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
            CG   + A+ +            S  ++TWG G   +LGHG  +    P  V        
Sbjct: 4488 CGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4535

Query: 522  CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
              +A G    +A + +G+V++ G  D GQLG    T     R+   ++ ++I  + CGS 
Sbjct: 4536 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4595

Query: 582  HIAVVSS 588
            H   +S+
Sbjct: 4596 HTLALST 4602



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 144/287 (50%), Gaps = 27/287 (9%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G+V+ WGEG  +G LG   +G  +S  DR     PK++E    ++   IACGS H+  +T
Sbjct: 4342 GEVYAWGEG-EDGKLG---HGNRMSY-DR-----PKLVEHLNGMNVADIACGSAHSAAIT 4391

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
              G + +WG+G  G+LGHG   D   P+L++AL G     +ACG  +  T  +    +++
Sbjct: 4392 ASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCINDDDNVW 4451

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +WGDG  + G LG+       +P K+   + GL +  + CG   + A+T +G ++T+G G
Sbjct: 4452 SWGDG--DYGKLGRGGSDGCKLPYKIES-LAGLGVIKVECGSQFSVALTKSGAVYTWGKG 4508

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             F  LGHG       P++V  L+  K +  + G  H  A  +            S +++T
Sbjct: 4509 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSD------------SGEVYT 4556

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
            WGD  EGQLG G       P  V         KV CG + T+AL+ +
Sbjct: 4557 WGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4603



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 150/315 (47%), Gaps = 36/315 (11%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA- 354
              Q I C     +++++ G++++W           +    + P+L++ +    I  +A 
Sbjct: 576 FQVQQIVCSESIVLILSEDGKLYNWR----------MFKPETEPQLLEEIAHETIVSIAS 625

Query: 355 -CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
            C   H  A+ ++ + Y+WG+G  +   LG     +  +P K++  +    + ++ CG  
Sbjct: 626 HCEGRHFMAIDINRNAYSWGNGEDHR--LGHGDTHARAVPTKIT--LLDRCVKAVFCGCS 681

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           ++AAIT +G L+T+G GT+  LGHG+     +P  V  L E +             I++V
Sbjct: 682 YSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHE-------------IIDV 728

Query: 474 AGKTSGSNGL---SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
           A  +  ++ L   S   ++ WGD   G+LG+G+    + P+ V+    +   +V  G   
Sbjct: 729 ALGSGDAHSLCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESLPKVQ--RVFAGAQF 786

Query: 531 TIALTATGQVFSMGSADY--GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
           ++ALT  GQ++S G A     QL    +      R+   ++H+ I D+A G  H   +SS
Sbjct: 787 SMALTTDGQLYSWGKASCLGHQLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLALSS 846

Query: 589 KSEVYTWGKGANGQL 603
             EV+ WG+  + Q+
Sbjct: 847 CGEVFGWGRNDSQQI 861



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 86/164 (52%), Gaps = 6/164 (3%)

Query: 479  GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTA 536
            G NG    K++  G+G  G+LG G      +P  + V       KVA   G    +ALT 
Sbjct: 3144 GQNG----KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTL 3199

Query: 537  TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
             G+VFS G  + G+LG    T     R+   ++ + I D+ACGS H A +SS+ E+YTWG
Sbjct: 3200 DGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWG 3259

Query: 597  KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
             G  G+LGHGDN  +  P LV AL  ++V  V CGS     + L
Sbjct: 3260 LGEYGRLGHGDNSTQLKPKLVAALAGRRVIQVACGSRDAQTLAL 3303



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/175 (32%), Positives = 93/175 (53%), Gaps = 10/175 (5%)

Query: 470 IVEVAGKTSGSNGLS---SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           IV +A    G + ++   ++  ++WG+G + +LGHGD   R VP  + + D      V C
Sbjct: 620 IVSIASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTKITLLDR-CVKAVFC 678

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS--YHI 583
           G S + A+T +G +++ G   Y +LG   S  +  PT +    +H  I D+A GS   H 
Sbjct: 679 GCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEII-DVALGSGDAHS 737

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             ++S+  VY WG    G+LG+G+     +P LVE+L   +V+ V  G+ F+ A+
Sbjct: 738 LCLTSEGHVYAWGDADYGKLGNGNLNGSMSPVLVESL--PKVQRVFAGAQFSMAL 790



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 104/223 (46%), Gaps = 14/223 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            A  ++ +G    G LG  + S    P   E L  L+ V  + G     A+          
Sbjct: 4235 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT--------- 4285

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
                  KLF  G G+ G+LG G A+   +P  +     +   KVA   G    +ALT  G
Sbjct: 4286 ---PDGKLFATGYGSGGRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4342

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V++ G  + G+LG          ++  ++    + DIACGS H A +++   V TWGKG
Sbjct: 4343 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKG 4402

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
              G+LGHGD+E++  P LVEAL   +   + CGS     +C++
Sbjct: 4403 RYGRLGHGDSEDQLRPQLVEALLGYRAIDIACGSGDAQTLCIN 4445



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 116/248 (46%), Gaps = 31/248 (12%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC-- 355
            +++ CG  ++  +T  G +++WG G+  +LGHG   D   P ++ AL    I  VA   
Sbjct: 673 VKAVFCGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGS 732

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWH 414
           G+ H+  +T  G +Y WGD   + G LG  +      P  V    E L ++  +  G   
Sbjct: 733 GDAHSLCLTSEGHVYAWGDA--DYGKLGNGNLNGSMSPVLV----ESLPKVQRVFAGAQF 786

Query: 415 TAAITSAGKLFTFGDGTFGALGHG--DRSST--SVPREVETLKELKTVMASCGVWHTAAI 470
           + A+T+ G+L+++G  +   LGH   +RS+   SVPR +  L+  + V  + GV H  A+
Sbjct: 787 SMALTTDGQLYSWGKAS--CLGHQLVERSAQWCSVPRLISGLQHKRIVDVAVGVAHCLAL 844

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQL--GHGDAEPRV-VPLCVKVSDDISFCKVACG 527
                        S  ++F WG     Q+      +EP + VP+ V +   +    VAC 
Sbjct: 845 S------------SCGEVFGWGRNDSQQICPSSVSSEPLLRVPILVALP-TLPASGVACT 891

Query: 528 HSITIALT 535
            S ++  T
Sbjct: 892 ASQSLIWT 899



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 61/110 (55%), Gaps = 3/110 (2%)

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           +A+      +S G+ +  +LG   +  +  PT+I   +  R ++ + CG  + A ++   
Sbjct: 633 MAIDINRNAYSWGNGEDHRLGHGDTHARAVPTKI--TLLDRCVKAVFCGCSYSAAITCSG 690

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG+G   +LGHG+++++  PT+V AL + ++  V  GS    ++CL
Sbjct: 691 NLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCL 740


>gi|313236433|emb|CBY11750.1| unnamed protein product [Oikopleura dioica]
          Length = 2239

 Score =  173 bits (438), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 123/376 (32%), Positives = 191/376 (50%), Gaps = 33/376 (8%)

Query: 256  FIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQG 315
            ++WG G+ +G LG  +N         R   LP+ LE+    + Q+I  G     L +  G
Sbjct: 1386 YVWG-GVRHGQLGLNMNV-------GRHCALPRRLEA--FDNMQTIELGLNCTFLCSASG 1435

Query: 316  QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC---GEFHTCAVTLSGDLYTW 372
             + S GEGS G+LGHG   D+S P L+ AL G  +  ++     + HT A+T SG+L+TW
Sbjct: 1436 AVTSTGEGSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSSVGSDGHTLAITESGELFTW 1495

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            GDG  + G LG  +      PR V   + G  +   CCG  HTA +T+ G L+TFG G +
Sbjct: 1496 GDG--DYGKLGHGNSERQRRPRLVE-TLVGETVVDGCCGYKHTAVVTATGYLYTFGYGDY 1552

Query: 433  GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            G LGHG+ +S   P  V   + + +V  SCG+ HT A+          +G++   ++ +G
Sbjct: 1553 GRLGHGNTTSKKTPTLVHDCQNIASV--SCGLNHTLAL--------SRDGMT---VWAFG 1599

Query: 493  DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            DG  G+LG G+      P  +   +++    V CGH  ++ L   G V+  G   +  +G
Sbjct: 1600 DGDFGKLGLGNTLAVQSPNKIAALENVGIKSVHCGHQWSVFLAINGDVYVCGQDAFNGIG 1659

Query: 553  SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
             PG T   PT++E  I  R  + I+CG+ +   +     V++WG  ++GQ+G G      
Sbjct: 1660 GPGQT-VIPTKLE-TINKRVFQ-ISCGAEYTLALDEDGNVWSWGNNSDGQVGCGHFNKVH 1716

Query: 613  TPTL-VEALRDKQVKS 627
             P L +   R KQV++
Sbjct: 1717 EPLLTLTGHRIKQVRA 1732



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 141/293 (48%), Gaps = 29/293 (9%)

Query: 370  YTWGDGIH-NLGLLGQVSEISHWIPRKVSG--QMEGLQISSICCGPWHTAAITSAGKLFT 426
            Y WG   H  LGL   V      +PR++     M+ +++   C     T   +++G + +
Sbjct: 1386 YVWGGVRHGQLGLNMNVGRHCA-LPRRLEAFDNMQTIELGLNC-----TFLCSASGAVTS 1439

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW---HTAAIVEVAGKTSGSNGL 483
             G+G++G LGHG+    SVP  V  L+       S  V    HT AI E           
Sbjct: 1440 TGEGSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSSVGSDGHTLAITE----------- 1488

Query: 484  SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
             S +LFTWGDG  G+LGHG++E +  P  V+     +     CG+  T  +TATG +++ 
Sbjct: 1489 -SGELFTWGDGDYGKLGHGNSERQRRPRLVETLVGETVVDGCCGYKHTAVVTATGYLYTF 1547

Query: 544  GSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANG 601
            G  DYG+LG   +T  K PT +      + I  ++CG  H +A+      V+ +G G  G
Sbjct: 1548 GYGDYGRLGHGNTTSKKTPTLVHDC---QNIASVSCGLNHTLALSRDGMTVWAFGDGDFG 1604

Query: 602  QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSG 654
            +LG G+    Q+P  + AL +  +KSV CG  ++  + ++  V +      +G
Sbjct: 1605 KLGLGNTLAVQSPNKIAALENVGIKSVHCGHQWSVFLAINGDVYVCGQDAFNG 1657


>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
          Length = 423

 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 182/355 (51%), Gaps = 44/355 (12%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ-GQIFSWGEGSGGKLGHGVE 333
           ++   D  D L P  L +    +  S+ CG+ H    ++   Q++SWG            
Sbjct: 47  QLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQVYSWG------------ 94

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
            D+  P+ I AL+G  I  +ACG+ H  AVT+ G++ +WG   +  G LG  +     +P
Sbjct: 95  CDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGR--NQNGQLGLGTTEDSLVP 152

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           +K+    +G+ +  +  G  HTAA+T  G+L+ +G G +G LG GDR+   VP +V T++
Sbjct: 153 QKIQA-FQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVE 211

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +K V  +CG  HT ++             SS  L+T+G    GQLGHGD E  + P  +
Sbjct: 212 GVKMVKVACGWRHTISVS------------SSGGLYTYGWSKYGQLGHGDFEDHLTPHKL 259

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG--------SPGSTGKFPTRIE 565
           +   +    +++ G   T+ALT+ G+++  G   +GQ+G        SP    KFP   E
Sbjct: 260 EALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQV-KFPH--E 316

Query: 566 GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
             + H     I+CG  H   V+ +  V++WG+G NGQLGHG++ ++  P ++E L
Sbjct: 317 QKVVH-----ISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVL 366



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 103/201 (51%), Gaps = 15/201 (7%)

Query: 253 GDVFIWGEG-LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           G+++ WG G  GN  LG           DR D L+P+ + +   +    +ACG +H + V
Sbjct: 180 GELYGWGWGRYGNLGLG-----------DRNDRLVPEKVSTVEGVKMVKVACGWRHTISV 228

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           +  G ++++G    G+LGHG   D   P  ++AL  + I  ++ G  HT A+T  G LY 
Sbjct: 229 SSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYG 288

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           W  G +  G +G    + H  P +V    E  ++  I CG  HT A+T    +F++G GT
Sbjct: 289 W--GWNKFGQVGVGDNVDHCSPVQVKFPHE-QKVVHISCGWRHTLAVTERQNVFSWGRGT 345

Query: 432 FGALGHGDRSSTSVPREVETL 452
            G LGHG+    ++P+ +E L
Sbjct: 346 NGQLGHGESIDRNIPKMIEVL 366



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 77/157 (49%), Gaps = 13/157 (8%)

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT-GQVF 541
           L    + +WG G +GQLGHGDAE R+ P  +   D      V CG   T A + +  QV+
Sbjct: 32  LXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTCGADHTTAYSESFTQVY 91

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           S G      L +P      P +    ++   I+ IACG  H   V+   EV +WG+  NG
Sbjct: 92  SWGC----DLFTP-----QPIKALHGLR---IKQIACGDSHCLAVTMDGEVQSWGRNQNG 139

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           QLG G  E+   P  ++A +   VK V  G+  TAA+
Sbjct: 140 QLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAV 176



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 33/46 (71%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           I+CG +H + VT++  +FSWG G+ G+LGHG   D + PK+I+ L+
Sbjct: 322 ISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLS 367


>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
          Length = 2334

 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 186/392 (47%), Gaps = 21/392 (5%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G +F WG     G LGG   G ++         +P    S   L    +  G +    
Sbjct: 1404 GSGSIFGWGHN-HRGQLGGP-EGAKVK--------IPIPCPSLAALKPIQLVGGEQTLFT 1453

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT +G++F+ G G+GG+LG G    V+ P LI+++   +I  V+   G  H  A++  G+
Sbjct: 1454 VTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGE 1513

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+G+      G  S + H  PR +   + G  I  +  G  H+AAI + G L+T+G
Sbjct: 1514 VYSWGEGVDGKLGHGNRSSLDH--PRIIE-SLRGDLIVKVATGGSHSAAINATGGLYTWG 1570

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ V  LK+   V  +CG        +    T G+ G  S  +
Sbjct: 1571 KGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACG----NGDAQTLCITEGTGG--SSVV 1624

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP  +          VACG   ++AL+  G V++ G  DY
Sbjct: 1625 WSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDY 1684

Query: 549  GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
             +LG          ++  +++   + +++ GS H        +VYTWG    GQ+G G  
Sbjct: 1685 YRLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTT 1744

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +  Q P LV AL+   +  V CGS  T A  L
Sbjct: 1745 QATQIPRLVAALQGHHISHVSCGSAHTVAWSL 1776



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 187/395 (47%), Gaps = 34/395 (8%)

Query: 250 DGLGDVFIWGEGLGNGL--LGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
           D    VF+WG    + L  L G+ +   ++S D +             L    +  GSK 
Sbjct: 426 DCAAKVFVWGLNDKDQLGGLKGSKHKTPVASKDLQR------------LKVTQVIGGSKS 473

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVT 364
              VT  G++++ GE + G+LG G V   VS  +L   L    I  +A   G  H  A+T
Sbjct: 474 LFAVTMGGKVYACGESTSGRLGLGPVTGSVS--RLTQVLFPQPIKKLAVHSGGRHAMALT 531

Query: 365 LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
             G +Y+WGDG    G LG  S      PRK+    E   I  I CG  H+AAI S+G L
Sbjct: 532 YDGHVYSWGDG--EEGKLGHGSRADALTPRKIETFPEKC-IRDISCGSSHSAAIGSSGTL 588

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           +T+G G +G LGHG+  +   P+ V+ L   + V  +CG      +          +GL 
Sbjct: 589 YTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLT------QDGL- 641

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
              +++WGDG  G+LG G ++   VP  V+        K+ CG   ++AL+  G V++ G
Sbjct: 642 ---VYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWG 698

Query: 545 SADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
             DY +LG       + P  +EG  +H+ + D+A G+ H   V+   +V+ WG   +GQ 
Sbjct: 699 KGDYFRLGHGSDQHVRRPQVVEGLREHKVV-DVAVGALHCLAVTEGGQVFAWGDNDHGQQ 757

Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G+G     + P  V+ L   ++  + CGS+ + A 
Sbjct: 758 GNGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAF 792



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 162/354 (45%), Gaps = 31/354 (8%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLEST--VVLDAQSIACGSKHA 308
            G G VF  G G G  L  G+   V I          P ++ES   V +   S+  G KH 
Sbjct: 1456 GEGKVFATGYGAGGRLGIGSNESVAI----------PTLIESIQHVHITQVSVNAGGKHI 1505

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
            + ++ +G+++SWGEG  GKLGHG  + + +P++I++L G  I  VA G  H+ A+  +G 
Sbjct: 1506 LALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGG 1565

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC-GPWHTAAITS----AGK 423
            LYTWG G    G LG         P+ V+   + L +   C  G   T  IT     +  
Sbjct: 1566 LYTWGKG--RYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSV 1623

Query: 424  LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
            ++++GDG +G LG G      VP  ++TL        +CG   + A+ +  G        
Sbjct: 1624 VWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGG-------- 1675

Query: 484  SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
                ++TWG G   +LGHG  E    P  ++    +   +V+ G    IA    G V++ 
Sbjct: 1676 ----VYTWGKGDYYRLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTW 1731

Query: 544  GSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
            G  D GQ+G   +      R+   ++  +I  ++CGS H    S  SE +   K
Sbjct: 1732 GDNDEGQIGDGTTQATQIPRLVAALQGHHISHVSCGSAHTVAWSLPSESHNMHK 1785



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 163/352 (46%), Gaps = 32/352 (9%)

Query: 188 VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
           + + T   K Y   ES S  L     G +  + SR +     +     AV S  + +   
Sbjct: 474 LFAVTMGGKVYACGESTSGRLGL---GPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMAL 530

Query: 248 DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
            +DG   V+ WG+G   G LG            R DAL P+ +E+      + I+CGS H
Sbjct: 531 TYDG--HVYSWGDG-EEGKLG---------HGSRADALTPRKIETFPEKCIRDISCGSSH 578

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
           +  +   G +++WG G  G+LGHG    +  PK + AL+G  +  VACG  +  T  +T 
Sbjct: 579 SAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQ 638

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            G +Y+WGDG  + G LG+       +P+ V  ++ G  +  I CG   + A++  G ++
Sbjct: 639 DGLVYSWGDG--DFGKLGRGGSDGCCVPKPVE-RLSGQDVVKIECGAQFSLALSRCGLVW 695

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
           T+G G +  LGHG       P+ VE L+E K V  + G  H  A+ E             
Sbjct: 696 TWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTE------------G 743

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
            ++F WGD   GQ G+G       P+ V+  + +   K+ACG S +IA   T
Sbjct: 744 GQVFAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAFADT 795



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 133/289 (46%), Gaps = 27/289 (9%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG ++ WG   HN  G LG        IP      +  L+   +  G      +T  GK+
Sbjct: 1405 SGSIFGWG---HNHRGQLGGPEGAKVKIPIPCP-SLAALKPIQLVGGEQTLFTVTGEGKV 1460

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
            F  G G  G LG G   S ++P  +E+++ +              I +V+    G + L+
Sbjct: 1461 FATGYGAGGRLGIGSNESVAIPTLIESIQHVH-------------ITQVSVNAGGKHILA 1507

Query: 485  ---SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
                 ++++WG+G +G+LGHG+      P  ++        KVA G S + A+ ATG ++
Sbjct: 1508 LSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLY 1567

Query: 542  SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV------SSKSEVYTW 595
            + G   YG+LG   S  +   ++   +K   + D+ACG+     +         S V++W
Sbjct: 1568 TWGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSW 1627

Query: 596  GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            G G  G+LG G ++  + P +++ L  K +  V CGS F+ A+    GV
Sbjct: 1628 GDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGV 1676



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 14/231 (6%)

Query: 415  TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            T +   +G +F +G    G LG  + +   +P    +L  LK +              V 
Sbjct: 1399 TLSWVGSGSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQL------------VG 1446

Query: 475  GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITI 532
            G+ +        K+F  G GA G+LG G  E   +P  ++    +   +V+   G    +
Sbjct: 1447 GEQTLFTVTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHIL 1506

Query: 533  ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
            AL+  G+V+S G    G+LG    +     RI  +++   I  +A G  H A +++   +
Sbjct: 1507 ALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGL 1566

Query: 593  YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
            YTWGKG  G+LGH D+E++  P LV AL+D  V  V CG+     +C+ +G
Sbjct: 1567 YTWGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEG 1617



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 90/221 (40%), Gaps = 13/221 (5%)

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           A K+F +G      LG    S    P   + L+ LK                + G  S  
Sbjct: 428 AAKVFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQV------------IGGSKSLF 475

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC-VKVSDDISFCKVACGHSITIALTATGQ 539
                 K++  G+   G+LG G     V  L  V     I    V  G    +ALT  G 
Sbjct: 476 AVTMGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGH 535

Query: 540 VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
           V+S G  + G+LG          R       + I DI+CGS H A + S   +YTWG G 
Sbjct: 536 VYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGM 595

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            G+LGHG+N     P  V+AL  +QV  V CGS     +CL
Sbjct: 596 YGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCL 636


>gi|313221384|emb|CBY32137.1| unnamed protein product [Oikopleura dioica]
          Length = 1586

 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 124/376 (32%), Positives = 192/376 (51%), Gaps = 33/376 (8%)

Query: 256  FIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQG 315
            ++WG G+ +G LG  +N         R   LP+ LE+    + Q+I  G     L +  G
Sbjct: 733  YVWG-GVRHGQLGLNMNV-------GRHCALPRRLEA--FDNMQTIELGLNCTFLCSASG 782

Query: 316  QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC---GEFHTCAVTLSGDLYTW 372
             + S GEGS G+LGHG   D+S P L+ AL G  +  ++     + HT A+T SG+L+TW
Sbjct: 783  AVTSTGEGSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSSVGSDGHTLAITESGELFTW 842

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            GDG  + G LG  +      PR V   + G  +   CCG  HTA +T+ G L+TFG G +
Sbjct: 843  GDG--DYGKLGHGNSERQRRPRLVE-TLVGETVVDGCCGYKHTAVVTATGYLYTFGYGDY 899

Query: 433  GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            G LGHG+ +S   P  V   + + +V  SCG+ HT A+          +G++   ++ +G
Sbjct: 900  GRLGHGNTTSKKTPTLVHDCQNIVSV--SCGLNHTLAL--------SRDGMT---VWAFG 946

Query: 493  DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            DG  G+LG G+      P  +   +++    V CGH  ++ L   G V+  G   +  +G
Sbjct: 947  DGDFGKLGLGNTLAVQSPNKIAALENVGIKSVHCGHQWSVFLAINGDVYVSGQDAFNGIG 1006

Query: 553  SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
             PG T   PT++E  IK R  + I+CG+ +   +     V++WG  ++GQ+G G      
Sbjct: 1007 GPGQT-VIPTKLE-TIKKRVFQ-ISCGAEYTLALDEDGNVWSWGNNSDGQVGCGHFNKVH 1063

Query: 613  TPTL-VEALRDKQVKS 627
             P L +   R KQV++
Sbjct: 1064 EPLLTLTGHRIKQVRA 1079



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 142/293 (48%), Gaps = 29/293 (9%)

Query: 370  YTWGDGIH-NLGLLGQVSEISHWIPRKVSG--QMEGLQISSICCGPWHTAAITSAGKLFT 426
            Y WG   H  LGL   V      +PR++     M+ +++   C     T   +++G + +
Sbjct: 733  YVWGGVRHGQLGLNMNVGRHCA-LPRRLEAFDNMQTIELGLNC-----TFLCSASGAVTS 786

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW---HTAAIVEVAGKTSGSNGL 483
             G+G++G LGHG+    SVP  V  L+       S  V    HT AI E           
Sbjct: 787  TGEGSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSSVGSDGHTLAITE----------- 835

Query: 484  SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
             S +LFTWGDG  G+LGHG++E +  P  V+     +     CG+  T  +TATG +++ 
Sbjct: 836  -SGELFTWGDGDYGKLGHGNSERQRRPRLVETLVGETVVDGCCGYKHTAVVTATGYLYTF 894

Query: 544  GSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANG 601
            G  DYG+LG   +T  K PT +      + I  ++CG  H +A+      V+ +G G  G
Sbjct: 895  GYGDYGRLGHGNTTSKKTPTLVHDC---QNIVSVSCGLNHTLALSRDGMTVWAFGDGDFG 951

Query: 602  QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSG 654
            +LG G+    Q+P  + AL +  +KSV CG  ++  + ++  V ++     +G
Sbjct: 952  KLGLGNTLAVQSPNKIAALENVGIKSVHCGHQWSVFLAINGDVYVSGQDAFNG 1004


>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
          Length = 2335

 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 186/392 (47%), Gaps = 21/392 (5%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G +F WG     G LGG   G ++         +P    S   L    +  G +    
Sbjct: 1405 GSGSIFGWGHN-HRGQLGGP-EGAKVK--------IPIPCPSLAALKPIQLVGGEQTLFT 1454

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT +G++F+ G G+GG+LG G    V+ P LI+++   +I  V+   G  H  A++  G+
Sbjct: 1455 VTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGE 1514

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+G+      G  S + H  PR +   + G  I  +  G  H+AAI + G L+T+G
Sbjct: 1515 VYSWGEGVDGKLGHGNRSSLDH--PRIIE-SLRGDLIVKVATGGSHSAAINATGGLYTWG 1571

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ V  LK+   V  +CG        +    T G+ G  S  +
Sbjct: 1572 KGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACG----NGDAQTLCITEGTGG--SSVV 1625

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP  +          VACG   ++AL+  G V++ G  DY
Sbjct: 1626 WSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDY 1685

Query: 549  GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
             +LG          ++  +++   + +++ GS H        +VYTWG    GQ+G G  
Sbjct: 1686 YRLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTT 1745

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +  Q P LV AL+   +  V CGS  T A  L
Sbjct: 1746 QATQIPRLVAALQGHHISHVSCGSAHTVAWSL 1777



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 187/395 (47%), Gaps = 34/395 (8%)

Query: 250 DGLGDVFIWGEGLGNGL--LGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
           D    VF+WG    + L  L G+ +   ++S D +             L    +  GSK 
Sbjct: 427 DCAAKVFVWGLNDKDQLGGLKGSKHKTPVASKDLQR------------LKVTQVIGGSKS 474

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVT 364
              VT  G++++ GE + G+LG G V   VS  +L   L    I  +A   G  H  A+T
Sbjct: 475 LFAVTMGGKVYACGESTSGRLGLGPVTGSVS--RLTQVLFPQPIKKLAVHSGGRHAMALT 532

Query: 365 LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
             G +Y+WGDG    G LG  S      PRK+    E   I  I CG  H+AAI S+G L
Sbjct: 533 YDGHVYSWGDG--EEGKLGHGSRADALTPRKIETFPEKC-IRDISCGSSHSAAIGSSGTL 589

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           +T+G G +G LGHG+  +   P+ V+ L   + V  +CG      +          +GL 
Sbjct: 590 YTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLT------QDGL- 642

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
              +++WGDG  G+LG G ++   VP  V+        K+ CG   ++AL+  G V++ G
Sbjct: 643 ---VYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWG 699

Query: 545 SADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
             DY +LG       + P  +EG  +H+ + D+A G+ H   V+   +V+ WG   +GQ 
Sbjct: 700 KGDYFRLGHGSDQHVRRPQVVEGLREHKVV-DVAVGALHCLAVTEGGQVFAWGDNDHGQQ 758

Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G+G     + P  V+ L   ++  + CGS+ + A 
Sbjct: 759 GNGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAF 793



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 162/354 (45%), Gaps = 31/354 (8%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLEST--VVLDAQSIACGSKHA 308
            G G VF  G G G  L  G+   V I          P ++ES   V +   S+  G KH 
Sbjct: 1457 GEGKVFATGYGAGGRLGIGSNESVAI----------PTLIESIQHVHITQVSVNAGGKHI 1506

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
            + ++ +G+++SWGEG  GKLGHG  + + +P++I++L G  I  VA G  H+ A+  +G 
Sbjct: 1507 LALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGG 1566

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC-GPWHTAAITS----AGK 423
            LYTWG G    G LG         P+ V+   + L +   C  G   T  IT     +  
Sbjct: 1567 LYTWGKG--RYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSV 1624

Query: 424  LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
            ++++GDG +G LG G      VP  ++TL        +CG   + A+ +  G        
Sbjct: 1625 VWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGG-------- 1676

Query: 484  SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
                ++TWG G   +LGHG  E    P  ++    +   +V+ G    IA    G V++ 
Sbjct: 1677 ----VYTWGKGDYYRLGHGSDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDVYTW 1732

Query: 544  GSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
            G  D GQ+G   +      R+   ++  +I  ++CGS H    S  SE +   K
Sbjct: 1733 GDNDEGQIGDGTTQATQIPRLVAALQGHHISHVSCGSAHTVAWSLPSESHNMHK 1786



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 163/352 (46%), Gaps = 32/352 (9%)

Query: 188 VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
           + + T   K Y   ES S  L     G +  + SR +     +     AV S  + +   
Sbjct: 475 LFAVTMGGKVYACGESTSGRLGL---GPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMAL 531

Query: 248 DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
            +DG   V+ WG+G   G LG            R DAL P+ +E+      + I+CGS H
Sbjct: 532 TYDG--HVYSWGDG-EEGKLG---------HGSRADALTPRKIETFPEKCIRDISCGSSH 579

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
           +  +   G +++WG G  G+LGHG    +  PK + AL+G  +  VACG  +  T  +T 
Sbjct: 580 SAAIGSSGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQ 639

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            G +Y+WGDG  + G LG+       +P+ V  ++ G  +  I CG   + A++  G ++
Sbjct: 640 DGLVYSWGDG--DFGKLGRGGSDGCCVPKPVE-RLSGQDVVKIECGAQFSLALSRCGLVW 696

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
           T+G G +  LGHG       P+ VE L+E K V  + G  H  A+ E             
Sbjct: 697 TWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTE------------G 744

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
            ++F WGD   GQ G+G       P+ V+  + +   K+ACG S +IA   T
Sbjct: 745 GQVFAWGDNDHGQQGNGGTTVNRKPMKVQGLEGVKITKLACGSSHSIAFADT 796



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 133/289 (46%), Gaps = 27/289 (9%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG ++ WG   HN  G LG        IP      +  L+   +  G      +T  GK+
Sbjct: 1406 SGSIFGWG---HNHRGQLGGPEGAKVKIPIPCP-SLAALKPIQLVGGEQTLFTVTGEGKV 1461

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
            F  G G  G LG G   S ++P  +E+++ +              I +V+    G + L+
Sbjct: 1462 FATGYGAGGRLGIGSNESVAIPTLIESIQHVH-------------ITQVSVNAGGKHILA 1508

Query: 485  ---SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
                 ++++WG+G +G+LGHG+      P  ++        KVA G S + A+ ATG ++
Sbjct: 1509 LSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLY 1568

Query: 542  SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV------SSKSEVYTW 595
            + G   YG+LG   S  +   ++   +K   + D+ACG+     +         S V++W
Sbjct: 1569 TWGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSW 1628

Query: 596  GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            G G  G+LG G ++  + P +++ L  K +  V CGS F+ A+    GV
Sbjct: 1629 GDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGV 1677



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 14/231 (6%)

Query: 415  TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            T +   +G +F +G    G LG  + +   +P    +L  LK +              V 
Sbjct: 1400 TLSWVGSGSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQL------------VG 1447

Query: 475  GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITI 532
            G+ +        K+F  G GA G+LG G  E   +P  ++    +   +V+   G    +
Sbjct: 1448 GEQTLFTVTGEGKVFATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHIL 1507

Query: 533  ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
            AL+  G+V+S G    G+LG    +     RI  +++   I  +A G  H A +++   +
Sbjct: 1508 ALSNEGEVYSWGEGVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGL 1567

Query: 593  YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
            YTWGKG  G+LGH D+E++  P LV AL+D  V  V CG+     +C+ +G
Sbjct: 1568 YTWGKGRYGRLGHEDSEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEG 1618



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 90/221 (40%), Gaps = 13/221 (5%)

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           A K+F +G      LG    S    P   + L+ LK                + G  S  
Sbjct: 429 AAKVFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQV------------IGGSKSLF 476

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC-VKVSDDISFCKVACGHSITIALTATGQ 539
                 K++  G+   G+LG G     V  L  V     I    V  G    +ALT  G 
Sbjct: 477 AVTMGGKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGH 536

Query: 540 VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
           V+S G  + G+LG          R       + I DI+CGS H A + S   +YTWG G 
Sbjct: 537 VYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGM 596

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            G+LGHG+N     P  V+AL  +QV  V CGS     +CL
Sbjct: 597 YGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCL 637


>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
          Length = 1049

 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 186/368 (50%), Gaps = 32/368 (8%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           +F WG  + +G LG  + G+E       +  +P+ ++     + + IACG  + V +TK+
Sbjct: 1   MFCWGSTI-HGELG--LGGIE-----DENIFMPREVDFIEASNVEQIACGENYTVAITKE 52

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           G+++S G    G+LGH  E      +LI  L+      +ACG  HT AV   G L++WG 
Sbjct: 53  GKVYSCGNNDYGQLGH--EKARKRLQLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGC 110

Query: 375 GIHNLGLLGQVS-EISHWIPR--KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            ++  G LG  S + +  +PR  KV G    +QI+   CG  H+ A+T+ G+L+ +G   
Sbjct: 111 NMN--GQLGLNSVDCTERVPRMIKVLGTNVIVQIA---CGTEHSIALTNDGELYAWGSNR 165

Query: 432 FGALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            G LG G  ++T + P+ + TL  +     +CG +HT  I +            S  +F+
Sbjct: 166 EGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVISK------------SGAVFS 213

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG    GQLG  D + R +P  ++   +   C   CG   ++ LT  G VF+ G+  YGQ
Sbjct: 214 WGRNTFGQLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQ 273

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG   +T +   R    +    +  I+CG  H +A+V S+  VY WG G  GQLG+  ++
Sbjct: 274 LGHGNTTNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASQ 333

Query: 610 NKQTPTLV 617
           +  TP +V
Sbjct: 334 SATTPQVV 341



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 152/335 (45%), Gaps = 29/335 (8%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +F WG    G+LG G   + ++  P+ +D +  SN+  +ACGE +T A+T  G +Y+ G+
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGN 60

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQ---ISSICCGPWHTAAITSAGKLFTFGDGT 431
             ++ G LG      H   RK    + GL       I CG  HT A+   G+LF++G   
Sbjct: 61  --NDYGQLG------HEKARKRLQLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNM 112

Query: 432 FGALGHGDRSSTS-VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            G LG      T  VPR ++ L     V  +CG  H+ A+             +  +L+ 
Sbjct: 113 NGQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALT------------NDGELYA 160

Query: 491 WGDGAEGQLGHGD-AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
           WG   EGQLG G      + P  +     +    +ACG   TI ++ +G VFS G   +G
Sbjct: 161 WGSNREGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFG 220

Query: 550 QLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           QLG      +  P ++   +++  +    CG      ++    V+T G G  GQLGHG+ 
Sbjct: 221 QLGLNDVQQRNLPCQLR-TLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNT 279

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
            N+  P  V  L    V  + CG   T A+   +G
Sbjct: 280 TNEILPRQVMELMGSTVTQISCGKRHTLALVPSRG 314



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 134/279 (48%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           ++ WG  IH    LG + + + ++PR+V   +E   +  I CG  +T AIT  GK+++ G
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPREVDF-IEASNVEQIACGENYTVAITKEGKVYSCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           +  +G LGH    +    + +  L        +CG  HT A+ E              +L
Sbjct: 60  NNDYGQLGH--EKARKRLQLIPGLDAFVFRKIACGNCHTLAVNEWG------------QL 105

Query: 489 FTWGDGAEGQLGHGDAE-PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           F+WG    GQLG    +    VP  +KV       ++ACG   +IALT  G++++ GS  
Sbjct: 106 FSWGCNMNGQLGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSNR 165

Query: 548 YGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
            GQLG  S  +T   P RI   +    I  IACG YH  V+S    V++WG+   GQLG 
Sbjct: 166 EGQLGLGSYTTTEIKPKRI-STLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D + +  P  +  LR+ +V    CG  F+  + +  GV
Sbjct: 225 NDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGV 263


>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4588

 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 188/392 (47%), Gaps = 34/392 (8%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G  DV++WG G    L G   N             LP +  +  +   Q + CG   + L
Sbjct: 3679 GKSDVYLWGNGRYGQLAGTGTN-----------LTLPTL--APCLSQTQQVVCGQNCSFL 3725

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSG 367
            +   G + + GEG  G+LG G   D+  P +I A  G  +   + +CG + H+ A+T +G
Sbjct: 3726 IQSNGAVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETG 3785

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            ++++WGDG  + G LG  +      P+++   ++G  +  + CG  H+A +T+ GKLFTF
Sbjct: 3786 EVFSWGDG--DFGKLGHGNNERQRRPKQIEA-LQGEDVVQLACGFRHSAVVTADGKLFTF 3842

Query: 428  GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
            G G  G LG    S+   P  V  L+       SCG+ HT  +            L    
Sbjct: 3843 GSGESGRLGQRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVL-----------SLDGMA 3891

Query: 488  LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
            ++ +GDG  G+LG G +  +  P  V+   +    KV CG   ++ L   G V++ G   
Sbjct: 3892 VWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVLATDGHVYTFGQER 3951

Query: 548  YGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
               +G P S  K  +  ++  +++  +IEDIA G  H+  +SS  ++Y WG  + GQLG 
Sbjct: 3952 L--IGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDIYAWGCNSEGQLGL 4009

Query: 606  GDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            G     + PTL+ AL+ K +K +  G   ++A
Sbjct: 4010 GHCNLVKEPTLITALQGKNIKQISAGRCHSSA 4041



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 193/405 (47%), Gaps = 34/405 (8%)

Query: 238 SSSSQGSCH-EDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           SSS+  +C   D D +  V++WG    + L  G +  +          LLPK+ +     
Sbjct: 323 SSSADTACPGTDGDAV-TVYVWGSNSSHQLAEGTLEKI----------LLPKLTQG--FS 369

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG 356
           DAQ+I  G      V+  G + + G+GS G+LG G   + S PK +      NI  V   
Sbjct: 370 DAQTIEAGQYCTFSVSTDGSVKACGKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSS 429

Query: 357 ---EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
              + HT A+T+ G++++WGDG    G LG  +  +   P+ V G +    + S   G  
Sbjct: 430 KGSDGHTLAITVDGEVFSWGDG--EYGKLGHGNSATQKYPKIVQGPLFSKIVVSASAGYR 487

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           H+AA+T+ G+L+T+G+G FG LGH D  S + P  V+ +  +  V  +CG  HT A+ + 
Sbjct: 488 HSAAVTNDGELYTWGEGDFGRLGHSDSQSRNTPTLVKDISGVGQV--ACGSSHTIAVAQ- 544

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
                       + ++++G G  G+LGHGD      P  ++        KV  G   ++A
Sbjct: 545 ----------DGRTMWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLA 594

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
           LT+ GQVF+ G       GS  +T   P  +E ++    I DI+CG  H   +S ++EVY
Sbjct: 595 LTSAGQVFAWGCGSCLGCGSSETTSLRPRFVE-DLSITKIIDISCGDSHCLALSHENEVY 653

Query: 594 TWGKGANGQLGHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAA 637
            WG    GQ G G      T P  V  L    ++ +  G++ + A
Sbjct: 654 AWGNNTMGQCGQGHTSTPITRPKKVLGLEGVSIQQITAGTSHSLA 698



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 174/365 (47%), Gaps = 45/365 (12%)

Query: 232  SLSSAVSSSSQGSCHEDFDGL----GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLP 287
            +L+  +S + Q  C ++   L    G V   GEG   G LG           +  D  +P
Sbjct: 3705 TLAPCLSQTQQVVCGQNCSFLIQSNGAVMAVGEG-QYGRLG---------QGNSDDLFVP 3754

Query: 288  KVLEST--VVLDAQSIACGSK-HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
             ++ +    V+     +CGS  H++ +T+ G++FSWG+G  GKLGHG       PK I+A
Sbjct: 3755 TIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHGNNERQRRPKQIEA 3814

Query: 345  LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
            L G ++  +ACG  H+  VT  G L+T+G G    G LGQ S  +   P +V+  +EG  
Sbjct: 3815 LQGEDVVQLACGFRHSAVVTADGKLFTFGSG--ESGRLGQRSTSNKMQPERVAA-LEGYH 3871

Query: 405  ISSICCGPWHTAAITSAGK-LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
            +  + CG  HT  ++  G  ++ FGDG +G LG G  ++   P++VE L         CG
Sbjct: 3872 VGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCG 3931

Query: 464  VWHTAAIVEVAGKTSGSNGLSSKKLFTWGD----GAEGQLGHGDAEPRVVP-LCVKVSDD 518
                 A   V   T G        ++T+G     G    +    + P+VVP L     +D
Sbjct: 3932 -----AQFSVVLATDG-------HVYTFGQERLIGLPDSMLKNRSNPQVVPSLEGLFIED 3979

Query: 519  ISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIA 577
            I+   V C H   +AL++TG +++ G    GQLG    +  K PT I   ++ + I+ I+
Sbjct: 3980 IA---VGCEH--VLALSSTGDIYAWGCNSEGQLGLGHCNLVKEPTLITA-LQGKNIKQIS 4033

Query: 578  CGSYH 582
             G  H
Sbjct: 4034 AGRCH 4038



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 134/276 (48%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG+G +   L G  + ++  +P          Q   + CG   +  I S G +   
Sbjct: 3682 DVYLWGNGRYG-QLAGTGTNLT--LPTLAPCLS---QTQQVVCGQNCSFLIQSNGAVMAV 3735

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G +G LG G+     VP  +   +   +  ++ SCG   H+ A+ E            
Sbjct: 3736 GEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCGSDGHSMALTETG---------- 3785

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
              ++F+WGDG  G+LGHG+ E +  P  ++        ++ACG   +  +TA G++F+ G
Sbjct: 3786 --EVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFG 3843

Query: 545  SADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVS-SKSEVYTWGKGANGQ 602
            S + G+LG   ++ K  P R+   ++  ++  ++CG  H  V+S     V+ +G G  G+
Sbjct: 3844 SGESGRLGQRSTSNKMQPERVAA-LEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGK 3902

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G +  K  P  VE L +K +K V CG+ F+  +
Sbjct: 3903 LGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVL 3938



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 145/295 (49%), Gaps = 30/295 (10%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +Y WG    +    G + +I   +P+   G  +   I +   G + T ++++ G +   G
Sbjct: 340 VYVWGSNSSHQLAEGTLEKI--LLPKLTQGFSDAQTIEA---GQYCTFSVSTDGSVKACG 394

Query: 429 DGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV-WHTAAIVEVAGKTSGSNGLSS 485
            G++G LG GD ++ S+P+++  E  + +K V +S G   HT AI  V G+         
Sbjct: 395 KGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDGHTLAIT-VDGE--------- 444

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV----ACGHSITIALTATGQVF 541
             +F+WGDG  G+LGHG++  +  P   K+     F K+    + G+  + A+T  G+++
Sbjct: 445 --VFSWGDGEYGKLGHGNSATQKYP---KIVQGPLFSKIVVSASAGYRHSAAVTNDGELY 499

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
           + G  D+G+LG   S  +    +  +I    +  +ACGS H IAV      ++++G G N
Sbjct: 500 TWGEGDFGRLGHSDSQSRNTPTLVKDISG--VGQVACGSSHTIAVAQDGRTMWSFGGGDN 557

Query: 601 GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGC 655
           G+LGHGD      P ++EAL    ++ V  GS  + A+     V       C GC
Sbjct: 558 GKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGC 612



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 116/224 (51%), Gaps = 26/224 (11%)

Query: 424  LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
            ++ +G+G +G L  G  ++ ++P     L + + V+  CG  + + +++       SNG 
Sbjct: 3683 VYLWGNGRYGQLA-GTGTNLTLPTLAPCLSQTQQVV--CGQ-NCSFLIQ-------SNG- 3730

Query: 484  SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK------VSDDISFCKVACGHSITIALTAT 537
                +   G+G  G+LG G+++   VP  +       V+  ++ C  + GHS+  ALT T
Sbjct: 3731 ---AVMAVGEGQYGRLGQGNSDDLFVPTIISAFQGYVVTQLVTSCG-SDGHSM--ALTET 3784

Query: 538  GQVFSMGSADYGQLGSPGST-GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
            G+VFS G  D+G+LG   +   + P +IE  ++   +  +ACG  H AVV++  +++T+G
Sbjct: 3785 GEVFSWGDGDFGKLGHGNNERQRRPKQIEA-LQGEDVVQLACGFRHSAVVTADGKLFTFG 3843

Query: 597  KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
             G +G+LG     NK  P  V AL    V  V CG N T  + L
Sbjct: 3844 SGESGRLGQRSTSNKMQPERVAALEGYHVGQVSCGLNHTLVLSL 3887


>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 443

 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 199/413 (48%), Gaps = 59/413 (14%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           V+ WG G G G LG           +  +   P  +E       + +  G   ++ +T  
Sbjct: 51  VYSWGYG-GFGQLG---------LQNENNYYTPTEIEVLTDKKIKKVEAGKSISMALTHN 100

Query: 315 GQIFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           G+++SWG+  GG LGH   +  +++ P+ I+ L G  I  ++CG+FH  AVT  G++YTW
Sbjct: 101 GEVYSWGKNKGGILGHEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTW 160

Query: 373 GDGIHNLGLLGQVSEI-------------SH------WIPRKVSGQMEGLQISSICCGPW 413
           G+     G LG   E+             SH       +P+K+   +  ++   + CG  
Sbjct: 161 GN--KEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIE-SLGNIKAKQVACGIQ 217

Query: 414 HTAAITSAGKLFTFGDGTFGALGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
            T  ++  GK++TFG   +G+LG+  D++S + P+ ++ L ++  V  S G    AAI +
Sbjct: 218 FTVVLSEDGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLNDI--VKISAGYSFCAAITK 275

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP-LCVKVSDDISFCKVACGHSIT 531
                         KL+TWG+   GQLG+  +  +  P +        S   V+CG +  
Sbjct: 276 QG------------KLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFI 323

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
            ALT  GQ+++ G    GQLG    +  + P  +E   K + I+ IACG  H A ++  +
Sbjct: 324 AALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVE--FKQKIIK-IACGGSHAAFITEDN 380

Query: 591 EVYTWGKGANGQLGHGDN-----ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           ++Y +G+G+ GQLG G N       + TP LV+  + KQV  V CG   T AI
Sbjct: 381 QLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQYFKGKQVVDVTCGGEHTIAI 433



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 156/365 (42%), Gaps = 57/365 (15%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRR--DALLPKVLESTVVLDAQSIACGSKHAVL 310
           G+V+ WG+  G G+LG           DR   +   P+ +E  +    + I+CG  H   
Sbjct: 101 GEVYSWGKNKG-GILG---------HEDRLSFNMTQPERIEKLLGKKIKQISCGQFHMAA 150

Query: 311 VTKQGQIFSWGEGSGGKLGHGVE-------------------ADVSYPKLIDALNGSNIH 351
           VT+ G++++WG    GKLGH  E                    D   P+ I++L      
Sbjct: 151 VTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAK 210

Query: 352 MVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCG 411
            VACG   T  ++  G +YT+  G +  G LG VS+ +     ++   +    I  I  G
Sbjct: 211 QVACGIQFTVVLSEDGKVYTF--GYNQYGSLGYVSDQNSVTTPQLIKDLN--DIVKISAG 266

Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTAAI 470
               AAIT  GKL+T+G+   G LG+      + P  V       +++  SCG    AA+
Sbjct: 267 YSFCAAITKQGKLYTWGNNRNGQLGNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAAL 326

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
            +              +L+TWG G +GQLGHG+      P  V+    I   K+ACG S 
Sbjct: 327 TQQG------------QLYTWGFGGDGQLGHGNKSDLYAPRHVEFKQKI--IKIACGGSH 372

Query: 531 TIALTATGQVFSMGSADYGQLG------SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIA 584
              +T   Q++  G    GQLG      S  S    P  ++   K + + D+ CG  H  
Sbjct: 373 AAFITEDNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQ-YFKGKQVVDVTCGGEHTI 431

Query: 585 VVSSK 589
            ++ +
Sbjct: 432 AITQE 436



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 104/240 (43%), Gaps = 22/240 (9%)

Query: 182 GKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSS 241
           G  F+ VLS     K YT   +   SL +V+       +  S T       L+  V  S+
Sbjct: 215 GIQFTVVLS--EDGKVYTFGYNQYGSLGYVS-------DQNSVTTPQLIKDLNDIVKISA 265

Query: 242 QGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
             S        G ++ WG    NG LG +      S    + +++        ++D   +
Sbjct: 266 GYSFCAAITKQGKLYTWGNNR-NGQLGNSQ-----SLYQTKPSIVTGFGSQNSIVD---V 316

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           +CG      +T+QGQ+++WG G  G+LGHG ++D+  P+ ++      I  +ACG  H  
Sbjct: 317 SCGDNFIAALTQQGQLYTWGFGGDGQLGHGNKSDLYAPRHVEFK--QKIIKIACGGSHAA 374

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQ--VSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
            +T    LY +G G      +GQ   SE S      +    +G Q+  + CG  HT AIT
Sbjct: 375 FITEDNQLYQFGRGSEGQLGIGQNVASEASIRSTPNLVQYFKGKQVVDVTCGGEHTIAIT 434


>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
 gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
          Length = 4253

 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 175/345 (50%), Gaps = 20/345 (5%)

Query: 298  AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG- 356
            A+ I CG     ++   G + + GEGS G+LG G   D+   + I AL G  +  +A   
Sbjct: 3439 AKQIHCGHNSTFVIEHDGTVLACGEGSYGRLGQGNSDDLPRLRPITALQGFVVTELATST 3498

Query: 357  --EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
              E H+ A+T +G++++WGDG  + G LG  +      PR++   + G  +  + CG  H
Sbjct: 3499 GLEGHSLALTETGEVFSWGDG--DYGKLGHGNSERQRRPRQIEA-LRGEDVLHVACGHKH 3555

Query: 415  TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            +A +T  GKLFTFG    G LG G+ S+  +P +V  L+ +   + +CG  HT  +    
Sbjct: 3556 SAIVTVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTALQPIMVELIACGANHTVVVTT-- 3613

Query: 475  GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                       + ++T+G+G  GQLG G    ++ P  V     ++  K+ CG   T+AL
Sbjct: 3614 ---------DRESVWTFGEGEYGQLGLGRTTAKMTPQYVDAFSKLNIKKICCGARFTLAL 3664

Query: 535  TATGQVFSMGSADYGQLGSPGS--TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
            T  G+V+S G      +    +     +P ++   +  ++IEDIA G  H   ++ + +V
Sbjct: 3665 TKEGKVYSCGHNRCNGIFEVDTQHADYYPQQVMA-LSEQFIEDIAAGYEHALALTKEGDV 3723

Query: 593  YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            ++WG   +GQLG G    ++ P L+ +L+ K ++ +  G N +AA
Sbjct: 3724 WSWGNDTDGQLGLGQTLPQREPCLISSLQGKGIRQISAGHNHSAA 3768



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 153/299 (51%), Gaps = 22/299 (7%)

Query: 322 EGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLYTWGDGIHN 378
           +G+ G+LG G  ++ + PKLI   +   I  +      + HT A+   G +Y+WGDG  +
Sbjct: 440 QGNYGRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIASDGRIYSWGDG--D 497

Query: 379 LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG 438
            G LG  + ++   P+ + G M+G  +  I  G  H+AAITS G L+T+GDG +G LGHG
Sbjct: 498 YGKLGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLGHG 557

Query: 439 DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ 498
           D  S S+P  V+ +  + +V  SCG   T  I + A             ++++G G  G+
Sbjct: 558 DNHSRSIPTLVKDITGVGSV--SCGSSFTVVISQDA-----------TTVWSFGAGDNGK 604

Query: 499 LGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG 558
           LGHGD      P  +     +   KV C    ++ALT+ GQVF  GS      G   +T 
Sbjct: 605 LGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSLALTSIGQVFVWGSGPCLGYGQADATF 664

Query: 559 KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLV 617
             P R++   +   I DIA G  H   ++  ++VY+WG  A+GQ G G+N    +P L+
Sbjct: 665 LVPKRLD-EFQDLQIIDIAVGDNHCLALTCDNDVYSWGNNASGQCGLGNN---NSPVLL 719



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 147/294 (50%), Gaps = 32/294 (10%)

Query: 370  YTWGDGIHNLGLLGQVSEISHWI--PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            YTWG G H     GQ++E    +  P   S   +  QI    CG   T  I   G +   
Sbjct: 3410 YTWGGGRH-----GQLAESGRLVLQPTLTSSFSKAKQIH---CGHNSTFVIEHDGTVLAC 3461

Query: 428  GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS--- 484
            G+G++G LG G+  S  +PR       L+ + A  G      + E+A  T G  G S   
Sbjct: 3462 GEGSYGRLGQGN--SDDLPR-------LRPITALQGF----VVTELATST-GLEGHSLAL 3507

Query: 485  --SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              + ++F+WGDG  G+LGHG++E +  P  ++         VACGH  +  +T  G++F+
Sbjct: 3508 TETGEVFSWGDGDYGKLGHGNSERQRRPRQIEALRGEDVLHVACGHKHSAIVTVDGKLFT 3567

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE-VYTWGKGAN 600
             G++D G+LG    S  K P ++   ++   +E IACG+ H  VV++  E V+T+G+G  
Sbjct: 3568 FGASDLGRLGLGNTSNKKLPAQVTA-LQPIMVELIACGANHTVVVTTDRESVWTFGEGEY 3626

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSG 654
            GQLG G    K TP  V+A     +K + CG+ FT A+     V    H+ C+G
Sbjct: 3627 GQLGLGRTTAKMTPQYVDAFSKLNIKKICCGARFTLALTKEGKVYSCGHNRCNG 3680



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 132/281 (46%), Gaps = 25/281 (8%)

Query: 307 HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI-DALNGSNIHMVACGEFHTCAVTL 365
           H + +   G+I+SWG+G  GKLGHG       PKLI   + G  +  +A G  H+ A+T 
Sbjct: 480 HTLAIASDGRIYSWGDGDYGKLGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITS 539

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKL 424
            G LYTWGDG  + G LG     S  IP  V   + G  + S+ CG   T  I+  A  +
Sbjct: 540 EGLLYTWGDG--DYGRLGHGDNHSRSIPTLVK-DITG--VGSVSCGSSFTVVISQDATTV 594

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           ++FG G  G LGHGD S    P+ +  L+ L      C    + A+  +           
Sbjct: 595 WSFGAGDNGKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSLALTSIG---------- 644

Query: 485 SKKLFTWGDGAEGQLGHGDAEPR-VVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
             ++F WG G    LG+G A+   +VP  +    D+    +A G +  +ALT    V+S 
Sbjct: 645 --QVFVWGSGP--CLGYGQADATFLVPKRLDEFQDLQIIDIAVGDNHCLALTCDNDVYSW 700

Query: 544 GSADYGQ--LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
           G+   GQ  LG+  S    P ++ G   H  I  I+ G+ H
Sbjct: 701 GNNASGQCGLGNNNSPVLLPRKVTGFDNH-VIYQISVGTSH 740



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 172/360 (47%), Gaps = 30/360 (8%)

Query: 232  SLSSAVSSSSQGSCHED----FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLP 287
            +L+S+ S + Q  C  +     +  G V   GEG   G LG         ++D    L P
Sbjct: 3431 TLTSSFSKAKQIHCGHNSTFVIEHDGTVLACGEG-SYGRLGQG-------NSDDLPRLRP 3482

Query: 288  -KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
               L+  VV +  +      H++ +T+ G++FSWG+G  GKLGHG       P+ I+AL 
Sbjct: 3483 ITALQGFVVTELATSTGLEGHSLALTETGEVFSWGDGDYGKLGHGNSERQRRPRQIEALR 3542

Query: 347  GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
            G ++  VACG  H+  VT+ G L+T+G    +LG LG  +  +  +P +V+  ++ + + 
Sbjct: 3543 GEDVLHVACGHKHSAIVTVDGKLFTFGAS--DLGRLGLGNTSNKKLPAQVTA-LQPIMVE 3599

Query: 407  SICCGPWHTAAITSAGK-LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
             I CG  HT  +T+  + ++TFG+G +G LG G  ++   P+ V+   +L      CG  
Sbjct: 3600 LIACGANHTVVVTTDRESVWTFGEGEYGQLGLGRTTAKMTPQYVDAFSKLNIKKICCGAR 3659

Query: 466  HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP-RVVPLCVKVSDDISFCKV 524
             T A+ +  GK           +F      E    H D  P +V+ L  +  +DI     
Sbjct: 3660 FTLALTK-EGKVYSCGHNRCNGIF------EVDTQHADYYPQQVMALSEQFIEDI----- 3707

Query: 525  ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIA 584
            A G+   +ALT  G V+S G+   GQLG   +  +    +  +++ + I  I+ G  H A
Sbjct: 3708 AAGYEHALALTKEGDVWSWGNDTDGQLGLGQTLPQREPCLISSLQGKGIRQISAGHNHSA 3767



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 143/287 (49%), Gaps = 31/287 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G ++ WG+G   G LG   +G  ++    +  L P  ++  VV   + IA G +H+  +T
Sbjct: 488 GRIYSWGDG-DYGKLG---HGNHVTQKSPKLILGP--MQGKVV---RQIAVGYRHSAAIT 538

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT- 371
            +G +++WG+G  G+LGHG     S P L+  + G  +  V+CG   T  V +S D  T 
Sbjct: 539 SEGLLYTWGDGDYGRLGHGDNHSRSIPTLVKDITG--VGSVSCGSSFT--VVISQDATTV 594

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           W  G  + G LG       + P+ +S  ++GL I  +CC    + A+TS G++F +G G 
Sbjct: 595 WSFGAGDNGKLGHGDTSRVYRPKVISN-LQGLLIRKVCCASQSSLALTSIGQVFVWGSGP 653

Query: 432 FGALGHGDRSSTS-VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
              LG+G   +T  VP+ ++  ++L+ +  + G  H  A+                 +++
Sbjct: 654 --CLGYGQADATFLVPKRLDEFQDLQIIDIAVGDNHCLALT------------CDNDVYS 699

Query: 491 WGDGAEGQLGHGDAE-PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           WG+ A GQ G G+   P ++P  V   D+    +++ G S +IA TA
Sbjct: 700 WGNNASGQCGLGNNNSPVLLPRKVTGFDNHVIYQISVGTSHSIAWTA 746



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 57/154 (37%), Positives = 86/154 (55%), Gaps = 16/154 (10%)

Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKV--------ACGHSITIALTATGQVFSMGS 545
           G  G+LG GD+  +  P  ++   +   CK+        + GH  T+A+ + G+++S G 
Sbjct: 441 GNYGRLGLGDSSNQNRPKLIRFEHE---CKIKNLVSSKGSDGH--TLAIASDGRIYSWGD 495

Query: 546 ADYGQLGSPGS-TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
            DYG+LG     T K P  I G ++ + +  IA G  H A ++S+  +YTWG G  G+LG
Sbjct: 496 GDYGKLGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWGDGDYGRLG 555

Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           HGDN ++  PTLV+ +    V SV CGS+FT  I
Sbjct: 556 HGDNHSRSIPTLVKDI--TGVGSVSCGSSFTVVI 587



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 31/220 (14%)

Query: 430 GTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGV-WHTAAIVEVAGKTSGSNGLSSK 486
           G +G LG GD S+ + P+ +    E  +K +++S G   HT AI             S  
Sbjct: 441 GNYGRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIA------------SDG 488

Query: 487 KLFTWGDGAEGQLGHGD----AEPRVV--PLCVKVSDDISFCKVACGHSITIALTATGQV 540
           ++++WGDG  G+LGHG+      P+++  P+  KV       ++A G+  + A+T+ G +
Sbjct: 489 RIYSWGDGDYGKLGHGNHVTQKSPKLILGPMQGKVVR-----QIAVGYRHSAAITSEGLL 543

Query: 541 FSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSK-SEVYTWGKG 598
           ++ G  DYG+LG   +  +  PT ++       +  ++CGS    V+S   + V+++G G
Sbjct: 544 YTWGDGDYGRLGHGDNHSRSIPTLVKDITG---VGSVSCGSSFTVVISQDATTVWSFGAG 600

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            NG+LGHGD      P ++  L+   ++ V C S  + A+
Sbjct: 601 DNGKLGHGDTSRVYRPKVISNLQGLLIRKVCCASQSSLAL 640



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 40/68 (58%)

Query: 299  QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
            + IA G +HA+ +TK+G ++SWG  + G+LG G       P LI +L G  I  ++ G  
Sbjct: 3705 EDIAAGYEHALALTKEGDVWSWGNDTDGQLGLGQTLPQREPCLISSLQGKGIRQISAGHN 3764

Query: 359  HTCAVTLS 366
            H+ A T++
Sbjct: 3765 HSAAWTVA 3772



 Score = 47.4 bits (111), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 20/118 (16%)

Query: 252 LGDVFIWGEG--LGNGLLGGAVNGVEISSADRRDA--LLPKVLESTVVLDAQSIACGSKH 307
           +G VF+WG G  LG G               + DA  L+PK L+    L    IA G  H
Sbjct: 643 IGQVFVWGSGPCLGYG---------------QADATFLVPKRLDEFQDLQIIDIAVGDNH 687

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGEFHTCAVT 364
            + +T    ++SWG  + G+ G G   + V  P+ +   +   I+ ++ G  H+ A T
Sbjct: 688 CLALTCDNDVYSWGNNASGQCGLGNNNSPVLLPRKVTGFDNHVIYQISVGTSHSIAWT 745


>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 669

 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/390 (31%), Positives = 186/390 (47%), Gaps = 53/390 (13%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P V++  + L  Q + CG +HA ++T  G+IF+WG G  G+LGHG    +  P+ I+AL 
Sbjct: 262 PVVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGRGGFGRLGHGNREGLESPRRIEALE 321

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL--Q 404
           G     VACG  +T AVT SG+LYTWG G +    LG V++      R    ++EGL  +
Sbjct: 322 GIPCVQVACGFAYTAAVTASGELYTWGAGENGRLGLGDVAD------RHTPSRVEGLHSK 375

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE-----LKTVM 459
           +  +  G  H+  +T  G ++ FG   +   GHGD      PR + T        ++ + 
Sbjct: 376 VKEVYAGSVHSCVLTREGTVYAFGKHEY--TGHGDHEDVLDPRLIPTFSGGSGALVRQIS 433

Query: 460 ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA--EPRVV-------- 509
              G +HT A+                +++ WG     QLG G++   PR +        
Sbjct: 434 VGPGGYHTMALT------------CQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPS 481

Query: 510 PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN-- 567
           P  V+    ++  KV  G   + ALT  GQ++  G    GQLG  GS   FP    G+  
Sbjct: 482 PQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQGQLGL-GSPQGFPQNERGHPF 540

Query: 568 ---------IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
                    ++H  I+ IACG  H   V+   EV+++G G  GQLGH     +  P LV+
Sbjct: 541 QADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGAGQKGQLGHESTTREDFPRLVQ 600

Query: 619 ALRD--KQVKSVVCGSNFTAAICLHKGVSI 646
           AL+   +++  V CG+N T  + L  GV+ 
Sbjct: 601 ALKSTRREIMHVACGNNCT--LVLAGGVAF 628



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 143/336 (42%), Gaps = 59/336 (17%)

Query: 160 NKDSGDTQPILVAYENSPQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDA 219
           N++  ++   + A E  P  ++   F+   + TA+ + YT     +  L      GL D 
Sbjct: 307 NREGLESPRRIEALEGIPCVQVACGFAYTAAVTASGELYTWGAGENGRL------GLGDV 360

Query: 220 NSRSSTADSFRI-SLSSAVSSSSQGSCHE-DFDGLGDVFIWG--EGLGNGLLGGAVNGVE 275
             R + +   R+  L S V     GS H       G V+ +G  E  G+G          
Sbjct: 361 ADRHTPS---RVEGLHSKVKEVYAGSVHSCVLTREGTVYAFGKHEYTGHG---------- 407

Query: 276 ISSADRRDALLPKVLE-----STVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGH 330
               D  D L P+++      S  ++   S+  G  H + +T QGQ+++WG     +LG 
Sbjct: 408 ----DHEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGI 463

Query: 331 GVEADV------SY----PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLG 380
           G    V      +Y    P+L+++L G NI  V  G  H+ A+T+ G LY  G      G
Sbjct: 464 GNSFTVPRNMEGAYFLPSPQLVESLVGMNIVKVVAGWGHSAALTVDGQLYVCGRNYQ--G 521

Query: 381 LLGQVSEISHWIPRKVSG-----------QMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
            LG  S      P+   G           +++ L+I  I CG  H+ A+   G++++FG 
Sbjct: 522 QLGLGS--PQGFPQNERGHPFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGEVWSFGA 579

Query: 430 GTFGALGHGDRSSTSVPREVETLKELK--TVMASCG 463
           G  G LGH   +    PR V+ LK  +   +  +CG
Sbjct: 580 GQKGQLGHESTTREDFPRLVQALKSTRREIMHVACG 615


>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Takifugu
            rubripes]
          Length = 3883

 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 189/392 (48%), Gaps = 34/392 (8%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G  DV++WG G    L G   N             +P +  S  +   Q + CG   + L
Sbjct: 3018 GKSDVYLWGNGRYGQLAGTGTN-----------LTVPTLAPS--LSQTQQVVCGQNCSFL 3064

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSG 367
            +   G + + GEG  G+LG G   D+  P +I A  G  +   + +CG + H+ A+T +G
Sbjct: 3065 IQSNGVVTAVGEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETG 3124

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            ++++WGDG  + G LG  +      P+++   ++G  +  + CG  H+A +T+ GKLFTF
Sbjct: 3125 EVFSWGDG--DFGKLGHGNNERQRRPKQIEA-LQGEDVVQLACGFRHSAVVTADGKLFTF 3181

Query: 428  GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
            G G  G LG    S+  +P  V  L+       SCG+ HT  +            L    
Sbjct: 3182 GSGESGRLGQRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVL-----------SLDGMA 3230

Query: 488  LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
            ++ +GDG  G+LG G +  +  P  V+   +    KV CG   ++ +   G V++ G   
Sbjct: 3231 VWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVVACDGHVYTFGQER 3290

Query: 548  YGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
               +G P S  K  +  ++  +++  +IEDIA G  H+  +SS  +VY WG  + GQLG 
Sbjct: 3291 L--IGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALSSTGDVYAWGCNSEGQLGL 3348

Query: 606  GDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            G     + PTL+ AL+ K +K +  G   ++A
Sbjct: 3349 GHCNPVKEPTLITALQGKNIKQISAGRCHSSA 3380



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 185/387 (47%), Gaps = 32/387 (8%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           V++WG    + L  G +  +          LLPK+ +     DAQ+I  G      V+  
Sbjct: 383 VYVWGSNSSHQLAEGTLEKI----------LLPKLTQG--FSDAQTIEAGQYCTFSVSTD 430

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLYT 371
           G + + G+GS G+LG G   + S PK +      NI  V+     + HT A+T+ G++++
Sbjct: 431 GSVKACGKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAITVDGEVFS 490

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WGDG    G LG  +  +   P+ + G +    + S   G  H+AA+T  G+L+T+G+G 
Sbjct: 491 WGDG--EYGKLGHGNSATQKYPKIIQGPLFSKIVVSASAGYRHSAAVTKDGELYTWGEGD 548

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           FG LGH D  S ++P  V+ +  +  V  +CG  HT A+ +             + ++++
Sbjct: 549 FGRLGHSDSQSRNMPTLVKDISGVGQV--ACGSSHTIAVAQ-----------DGRTVWSF 595

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           G G  G+LGHGD      P  ++        KV  G   ++ALT+ GQVF+ G       
Sbjct: 596 GGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGC 655

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
           GS  +T   P  +E ++    I DI+CG  H   +S ++EVY WG    GQ G G     
Sbjct: 656 GSSETTSLRPRFVE-DLSITKIIDISCGDSHCLALSHENEVYAWGNNTMGQCGQGHTSTP 714

Query: 612 QT-PTLVEALRDKQVKSVVCGSNFTAA 637
            T P  V  L    ++ +  G++ + A
Sbjct: 715 ITRPKKVLGLEGVSIQQITAGTSHSLA 741



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 168/344 (48%), Gaps = 31/344 (9%)

Query: 283  DALLPKVLEST--VVLDAQSIACGSK-HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
            D  +P ++ +    V+     +CGS  H++ +T+ G++FSWG+G  GKLGHG       P
Sbjct: 3089 DLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVFSWGDGDFGKLGHGNNERQRRP 3148

Query: 340  KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ 399
            K I+AL G ++  +ACG  H+  VT  G L+T+G G    G LGQ S  +  +P +V+  
Sbjct: 3149 KQIEALQGEDVVQLACGFRHSAVVTADGKLFTFGSG--ESGRLGQRSTSNKMLPERVAA- 3205

Query: 400  MEGLQISSICCGPWHTAAITSAGK-LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV 458
            +EG  +  + CG  HT  ++  G  ++ FGDG +G LG G  ++   P++VE L      
Sbjct: 3206 LEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQLCNKGMK 3265

Query: 459  MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD----GAEGQLGHGDAEPRVVP-LCV 513
               CG    + +V   G            ++T+G     G    +    + P+VVP L  
Sbjct: 3266 KVCCGA-QFSVVVACDG-----------HVYTFGQERLIGLPDSMLKNRSNPQVVPSLEG 3313

Query: 514  KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRY 572
               +DI+   V C H   +AL++TG V++ G    GQLG    +  K PT I   ++ + 
Sbjct: 3314 LFIEDIA---VGCEH--VLALSSTGDVYAWGCNSEGQLGLGHCNPVKEPTLITA-LQGKN 3367

Query: 573  IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTL 616
            I+ I+ G  H +  ++ S     G   N QLG   +   Q  TL
Sbjct: 3368 IKQISAGRCHSSAWTTPSTSKNSGGPGNLQLGLPQSVPPQYNTL 3411



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 137/305 (44%), Gaps = 24/305 (7%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G+VF WG+G   G LG   N        RR    PK +E+    D   +ACG +H+ +VT
Sbjct: 3124 GEVFSWGDG-DFGKLGHGNN-----ERQRR----PKQIEALQGEDVVQLACGFRHSAVVT 3173

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
              G++F++G G  G+LG    ++   P+ + AL G ++  V+CG  HT  ++L G +  W
Sbjct: 3174 ADGKLFTFGSGESGRLGQRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVLSLDG-MAVW 3232

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
              G  + G LG  S  + + P+KV  Q+    +  +CCG   +  +   G ++TFG    
Sbjct: 3233 AFGDGDYGKLGAGSSTAKYYPQKVE-QLCNKGMKKVCCGAQFSVVVACDGHVYTFGQERL 3291

Query: 433  GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
              L      + S P+ V +L+ L     + G  H  A+             S+  ++ WG
Sbjct: 3292 IGLPDSMLKNRSNPQVVPSLEGLFIEDIAVGCEHVLALS------------STGDVYAWG 3339

Query: 493  DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              +EGQLG G   P   P  +      +  +++ G   + A T      + G     QLG
Sbjct: 3340 CNSEGQLGLGHCNPVKEPTLITALQGKNIKQISAGRCHSSAWTTPSTSKNSGGPGNLQLG 3399

Query: 553  SPGST 557
             P S 
Sbjct: 3400 LPQSV 3404



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 134/276 (48%), Gaps = 24/276 (8%)

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            D+Y WG+G +   L G  + ++  +P          Q   + CG   +  I S G +   
Sbjct: 3021 DVYLWGNGRYG-QLAGTGTNLT--VPTLAPSLS---QTQQVVCGQNCSFLIQSNGVVTAV 3074

Query: 428  GDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
            G+G +G LG G+     VP  +   +   +  ++ SCG   H+ A+ E            
Sbjct: 3075 GEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCGSDGHSMALTETG---------- 3124

Query: 485  SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
              ++F+WGDG  G+LGHG+ E +  P  ++        ++ACG   +  +TA G++F+ G
Sbjct: 3125 --EVFSWGDGDFGKLGHGNNERQRRPKQIEALQGEDVVQLACGFRHSAVVTADGKLFTFG 3182

Query: 545  SADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVS-SKSEVYTWGKGANGQ 602
            S + G+LG   ++ K  P R+   ++  ++  ++CG  H  V+S     V+ +G G  G+
Sbjct: 3183 SGESGRLGQRSTSNKMLPERVAA-LEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGK 3241

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G +  K  P  VE L +K +K V CG+ F+  +
Sbjct: 3242 LGAGSSTAKYYPQKVEQLCNKGMKKVCCGAQFSVVV 3277



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 32/296 (10%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +Y WG    +    G + +I   +P+   G  +   I +   G + T ++++ G +   G
Sbjct: 383 VYVWGSNSSHQLAEGTLEKI--LLPKLTQGFSDAQTIEA---GQYCTFSVSTDGSVKACG 437

Query: 429 DGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV-WHTAAIVEVAGKTSGSNGLSS 485
            G++G LG GD ++ S+P+++  E  + +K V +S G   HT AI  V G+         
Sbjct: 438 KGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAIT-VDGE--------- 487

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV----ACGHSITIALTATGQVF 541
             +F+WGDG  G+LGHG++  +  P   K+     F K+    + G+  + A+T  G+++
Sbjct: 488 --VFSWGDGEYGKLGHGNSATQKYP---KIIQGPLFSKIVVSASAGYRHSAAVTKDGELY 542

Query: 542 SMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGA 599
           + G  D+G+LG   S  +  PT ++ +I    +  +ACGS H IAV      V+++G G 
Sbjct: 543 TWGEGDFGRLGHSDSQSRNMPTLVK-DISG--VGQVACGSSHTIAVAQDGRTVWSFGGGD 599

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGC 655
           NG+LGHGD      P ++EAL    ++ V  GS  + A+     V       C GC
Sbjct: 600 NGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGC 655



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 118/224 (52%), Gaps = 26/224 (11%)

Query: 424  LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
            ++ +G+G +G L  G  ++ +VP    +L + + V+  CG  + + +++       SNG+
Sbjct: 3022 VYLWGNGRYGQLA-GTGTNLTVPTLAPSLSQTQQVV--CGQ-NCSFLIQ-------SNGV 3070

Query: 484  SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK------VSDDISFCKVACGHSITIALTAT 537
             +      G+G  G+LG G+++   VP  +       V+  ++ C  + GHS+  ALT T
Sbjct: 3071 VTAV----GEGQYGRLGQGNSDDLYVPTIISAFQGYVVTQLVTSCG-SDGHSM--ALTET 3123

Query: 538  GQVFSMGSADYGQLGSPGST-GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
            G+VFS G  D+G+LG   +   + P +IE  ++   +  +ACG  H AVV++  +++T+G
Sbjct: 3124 GEVFSWGDGDFGKLGHGNNERQRRPKQIEA-LQGEDVVQLACGFRHSAVVTADGKLFTFG 3182

Query: 597  KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
             G +G+LG     NK  P  V AL    V  V CG N T  + L
Sbjct: 3183 SGESGRLGQRSTSNKMLPERVAALEGYHVGQVSCGLNHTLVLSL 3226


>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
          Length = 1048

 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 177/366 (48%), Gaps = 28/366 (7%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           +F WG  + +G LG  + G+E       +  +P+ ++     + + IACG  + V +T  
Sbjct: 1   MFCWGSTI-HGELG--LGGIE-----DENIFMPRQVDFAKANEVEQIACGENYTVTITND 52

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           GQ++S G    G+LGH  E      +LI  L+      +ACG  HT AV   G L++WG 
Sbjct: 53  GQVYSCGNNDYGQLGH--EKARKRLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGC 110

Query: 375 GIHNLGLLGQVS-EISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
            +   G LG  S + +   PR V      + I  I CG  H+ A+T+ G+L+++G    G
Sbjct: 111 NMK--GQLGLNSVDCTERTPRMVKALGTSV-IVQIACGIEHSIALTNDGELYSWGSNREG 167

Query: 434 ALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            LG G  + T + P+ + TL  +     +CG +HT  I +            S  +F WG
Sbjct: 168 QLGIGSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVISK------------SGVVFAWG 215

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
               GQLG  D + R+VP  ++   +   C  ACG   ++ LT  G VF+ G+  YGQLG
Sbjct: 216 RNTFGQLGLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLG 275

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENK 611
                 +   R    +    +  I+CG  H +A+V S+  VY WG G  GQLG+  + + 
Sbjct: 276 HGNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASRSA 335

Query: 612 QTPTLV 617
            TP +V
Sbjct: 336 TTPLVV 341



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 157/339 (46%), Gaps = 37/339 (10%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +F WG    G+LG G   + ++  P+ +D    + +  +ACGE +T  +T  G +Y+ G+
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGN 60

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQ---ISSICCGPWHTAAITSAGKLFTFGDGT 431
             ++ G LG      H   RK    + GL       I CG  HT A+   G+LF++G   
Sbjct: 61  --NDYGQLG------HEKARKRLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNM 112

Query: 432 FGALGHGDRSSTS-VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            G LG      T   PR V+ L     V  +CG+ H+ A+             +  +L++
Sbjct: 113 KGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALT------------NDGELYS 160

Query: 491 WGDGAEGQLGHG-----DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
           WG   EGQLG G     + +P+ +     V   I+F  +ACG   T+ ++ +G VF+ G 
Sbjct: 161 WGSNREGQLGIGSHTVTEIKPKRIITLAAVP--IAF--IACGGYHTVVISKSGVVFAWGR 216

Query: 546 ADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
             +GQLG   +  +  P ++   +++  +   ACG      ++    V+T G G  GQLG
Sbjct: 217 NTFGQLGLNDTQQRIVPCQLR-TLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLG 275

Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
           HG+  N+  P  V  L    V  + CG   T A+   +G
Sbjct: 276 HGNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPSRG 314



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 131/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           ++ WG  IH    LG + + + ++PR+V    +  ++  I CG  +T  IT+ G++++ G
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPRQVDFA-KANEVEQIACGENYTVTITNDGQVYSCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           +  +G LGH    +    + +  L        +CG  HT A+ E              +L
Sbjct: 60  NNDYGQLGH--EKARKRLQLIPGLDAFVFKKIACGSCHTLAVNEWG------------QL 105

Query: 489 FTWGDGAEGQLGHGDAE-PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           F+WG   +GQLG    +     P  VK        ++ACG   +IALT  G+++S GS  
Sbjct: 106 FSWGCNMKGQLGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSNR 165

Query: 548 YGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
            GQLG  S   T   P RI   +    I  IACG YH  V+S    V+ WG+   GQLG 
Sbjct: 166 EGQLGIGSHTVTEIKPKRII-TLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D + +  P  +  LR+ +V    CG  F+  + L  GV
Sbjct: 225 NDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGV 263


>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
          Length = 434

 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 205/405 (50%), Gaps = 30/405 (7%)

Query: 226 ADSFRISLSSA-VSSSSQGSCHE-DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRD 283
           A +FR ++S   V+S S GS H       G    WG G  +G LG           D  +
Sbjct: 4   ATTFRSAVSDLRVTSVSCGSSHSLALLSNGIALSWGRGE-DGQLG---------HGDAEE 53

Query: 284 ALLPKVLESTVVLDAQSIACGSKHAVLVTK-QGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
              P+ +   +     ++  G++++V +++ + +++SWG G  G+LGHG   DV  P+ I
Sbjct: 54  RKKPRAIFHLMQASCSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPI 113

Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
            AL G NI  VACG+ HT AVT +G+L+++G   +    LG  S+    +P+ V   + G
Sbjct: 114 RALAGRNIVKVACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAI--LPQPVE-SLRG 170

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
            +++SI CG  H+ A TSAG +F +G G +G LG G      +P +V  L+ +K    +C
Sbjct: 171 QEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVAC 230

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
           G  H+ A  E               ++T+G    GQLGHGD   ++VP  V+   D    
Sbjct: 231 GWRHSIAADETG------------AVYTFGWSKYGQLGHGDCIDQLVPKAVESLKDSRIV 278

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGST-GKFPTRIEGNIKHRYIEDIACGSY 581
            +A G   T A   +G+++S G   +GQLG   +T    P  ++G +    ++ ++CG  
Sbjct: 279 LIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTDSNAPVPVQG-LNTSPVKLLSCGWR 337

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVK 626
           H   V+   +V++WG+G NGQLGH + ++   P  +  L    +K
Sbjct: 338 HTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNAPVRLAELSMGSIK 382



 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/344 (31%), Positives = 163/344 (47%), Gaps = 16/344 (4%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
           L   S++CGS H++ +   G   SWG G  G+LGHG   +   P+ I  L  ++   V  
Sbjct: 14  LRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVCS 73

Query: 356 GEFHTCAVTLS-GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
           G  ++ A++    ++Y+WG G  + G LG       +IP+ +   + G  I  + CG  H
Sbjct: 74  GAEYSVALSQPRNEVYSWGWG--DFGRLGHGDCNDVFIPQPIR-ALAGRNIVKVACGDTH 130

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           T A+T  G+LF+FG    G LG G  S   +P+ VE+L+  +    +CG  H+ A     
Sbjct: 131 TLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLRGQEVTSIACGGEHSLAAT--- 187

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                    S+  +F WG G  G LG G  E R +P  V   + +    VACG   +IA 
Sbjct: 188 ---------SAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAA 238

Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
             TG V++ G + YGQLG      +   +   ++K   I  IA G  H +      ++Y+
Sbjct: 239 DETGAVYTFGWSKYGQLGHGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYS 298

Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           WG    GQLG G N +   P  V+ L    VK + CG   T A+
Sbjct: 299 WGWNKFGQLGIGSNTDSNAPVPVQGLNTSPVKLLSCGWRHTFAV 342



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 99/213 (46%), Gaps = 15/213 (7%)

Query: 253 GDVFIWGEG-LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           GDVF WG G  GN           +      D  LP  +     +   S+ACG +H++  
Sbjct: 190 GDVFAWGWGRYGN-----------LGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAA 238

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            + G ++++G    G+LGHG   D   PK +++L  S I ++A G  HT A   SG LY+
Sbjct: 239 DETGAVYTFGWSKYGQLGHGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGKLYS 298

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   +  G LG  S      P  V G +    +  + CG  HT A+T AG +F++G G 
Sbjct: 299 WG--WNKFGQLGIGSNTDSNAPVPVQG-LNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGV 355

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
            G LGH +   T+ P  +  L      +   GV
Sbjct: 356 NGQLGHNEPKDTNAPVRLAELSMGSIKLEDLGV 388


>gi|146169381|ref|XP_001471365.1| regulator of chromosome condensation [Tetrahymena thermophila]
 gi|146145109|gb|EDK31655.1| regulator of chromosome condensation [Tetrahymena thermophila
           SB210]
          Length = 448

 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 191/368 (51%), Gaps = 36/368 (9%)

Query: 280 DRRDALL--PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA--D 335
           ++R+++   P+V    +V+    +ACG  H   V K G +++ G  + GKLG G ++  +
Sbjct: 6   NKRNSVFYYPRVCSFQIVI--HQLACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSLQN 63

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRK 395
              P+L+ AL+   +  V+CG  HTCA+  SG+L++WGD     G LG  S  SH+ P+ 
Sbjct: 64  SFQPQLVSALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSE--GQLGINSNGSHYNPQL 121

Query: 396 VS-GQMEGLQ--ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
           V+   ++G+   ++ + CG +HT A+   G++ +FG G  G LG G+++    P  + +L
Sbjct: 122 VNFSDLKGINTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLGTGNQNKQYKPFLLNSL 181

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC 512
            ++  +   CG +HT  + E            S ++++ G   EGQLG G  E  +    
Sbjct: 182 SQI--IKVKCGFYHTLFLDE------------SGRVYSCGLNDEGQLGQGHNEGNISSPR 227

Query: 513 VKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY 572
           + +  + SF K     S + A+T   +++  G +  GQ   P    +     +G++    
Sbjct: 228 LVLELEHSFIKKIFAGSHSAAITDANEIYFFGKSQLGQFLYP----QLVRICQGDV---- 279

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
             +I+ G++    V+   +VY+WG    GQLG GD++ +  P+LVE L +K+V S  CG 
Sbjct: 280 -NEISIGNHFGVAVTYDGKVYSWGINQQGQLGQGDSDVRIIPSLVEPLNEKKVISATCGE 338

Query: 633 NFTAAICL 640
           N+   ICL
Sbjct: 339 NYV--ICL 344



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 140/311 (45%), Gaps = 49/311 (15%)

Query: 270 AVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG 329
           A+  + I     +++  P+++ +        ++CG  H   +   G++FSWG+ S G+LG
Sbjct: 50  ALGKLGIGQQSLQNSFQPQLVSALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEGQLG 109

Query: 330 HGVEADVSYPKLIDA--LNGSNIHM--VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
                    P+L++   L G N  +  V+CG +HT AV  +G + ++G G    G LG  
Sbjct: 110 INSNGSHYNPQLVNFSDLKGINTFVTDVSCGYYHTVAVLKNGQVCSFGSG--KKGQLGTG 167

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTS 444
           ++   + P  ++      QI  + CG +HT  +  +G++++ G    G LG G +  + S
Sbjct: 168 NQNKQYKPFLLNSLS---QIIKVKCGFYHTLFLDESGRVYSCGLNDEGQLGQGHNEGNIS 224

Query: 445 VPREVETLKE--LKTVMASCGVWHTAAI-----VEVAGKTSGSNGLSSK----------- 486
            PR V  L+   +K + A     H+AAI     +   GK+     L  +           
Sbjct: 225 SPRLVLELEHSFIKKIFAGS---HSAAITDANEIYFFGKSQLGQFLYPQLVRICQGDVNE 281

Query: 487 ---------------KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
                          K+++WG   +GQLG GD++ R++P  V+  ++       CG +  
Sbjct: 282 ISIGNHFGVAVTYDGKVYSWGINQQGQLGQGDSDVRIIPSLVEPLNEKKVISATCGENYV 341

Query: 532 IALTATGQVFS 542
           I L   GQV +
Sbjct: 342 ICL---GQVMN 349


>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
          Length = 786

 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/301 (34%), Positives = 155/301 (51%), Gaps = 15/301 (4%)

Query: 339 PKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV 396
           P L++++    I  VA   G  H  A++  G +Y+WG+G  + G LG  +++S+  P+ +
Sbjct: 3   PTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEG--DDGKLGHGNKVSYDRPKLI 60

Query: 397 SGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK 456
              + G++I  I CG  H+AAITSAG L+T+G G +G LGHGD      P+ VE L++ K
Sbjct: 61  E-DLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYK 119

Query: 457 TVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
            +  +CG          +G            +++WGDG  G+LG G ++   VPL +   
Sbjct: 120 VIDVACG----------SGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSL 169

Query: 517 DDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDI 576
             +   KV CG   ++ALT +G V++ G  DY +LG          R    ++ + I  I
Sbjct: 170 AGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISI 229

Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTA 636
           A GS H    S K EV+TWG    GQLG G       P LV AL+ K++  V CGS  T 
Sbjct: 230 ATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTL 289

Query: 637 A 637
           A
Sbjct: 290 A 290



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 95/302 (31%), Positives = 147/302 (48%), Gaps = 19/302 (6%)

Query: 285 LLPKVLEST--VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
           ++P +LES   V +   +++ G KH + ++ +G ++SWGEG  GKLGHG +     PKLI
Sbjct: 1   MIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLI 60

Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
           + L G  I  +ACG  H+ A+T +G LYTWG G    G LG         P KV   ++ 
Sbjct: 61  EDLLGVEIVDIACGGHHSAAITSAGWLYTWGKG--RYGRLGHGDSDDQLRP-KVVEALQD 117

Query: 403 LQISSICC--GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
            ++  + C  G   T  +T    ++++GDG +G LG G      VP ++++L  L  V  
Sbjct: 118 YKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKV 177

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
            CG   + A+              S  ++TWG G   +LGHG  +    P  V       
Sbjct: 178 ECGSQFSVALTR------------SGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKK 225

Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS 580
              +A G    +A +  G+VF+ G  D GQLG   ++     R+   ++ + I  +ACGS
Sbjct: 226 IISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGS 285

Query: 581 YH 582
            H
Sbjct: 286 AH 287



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 111/223 (49%), Gaps = 23/223 (10%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           G ++ WG+G    LG+G              D  D L PKV+E+        +ACGS  A
Sbjct: 85  GWLYTWGKGRYGRLGHG--------------DSDDQLRPKVVEALQDYKVIDVACGSGDA 130

Query: 309 --VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
             + VT    ++SWG+G  GKLG G       P  ID+L G  +  V CG   + A+T S
Sbjct: 131 QTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRS 190

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
           G +YTWG G ++   LG  ++     PRKV+  ++G +I SI  G  H  A +  G++FT
Sbjct: 191 GAVYTWGKGDYH--RLGHGTDDHVRRPRKVAA-LQGKKIISIATGSLHCVACSDKGEVFT 247

Query: 427 FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA 469
           +GD   G LG G  S+   PR V  L+  K    +CG  HT A
Sbjct: 248 WGDNDEGQLGDGTTSALHRPRLVHALQGKKITRVACGSAHTLA 290



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/117 (39%), Positives = 69/117 (58%)

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHI 583
           V+ G    IAL++ G V+S G  D G+LG          ++  ++    I DIACG +H 
Sbjct: 19  VSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHS 78

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           A ++S   +YTWGKG  G+LGHGD++++  P +VEAL+D +V  V CGS     +C+
Sbjct: 79  AAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQTLCV 135



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 29/218 (13%)

Query: 238 SSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLD 297
           S  +Q  C  D D   +V+ WG+G    L  G  +G ++          P  ++S   L 
Sbjct: 127 SGDAQTLCVTDDD---NVWSWGDGDYGKLGRGGSDGCKV----------PLKIDSLAGLG 173

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
              + CGS+ +V +T+ G +++WG+G   +LGHG +  V  P+ + AL G  I  +A G 
Sbjct: 174 VVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGS 233

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
            H  A +  G+++TWGD  ++ G LG  +  +   PR V   ++G +I+ + CG  HT A
Sbjct: 234 LHCVACSDKGEVFTWGD--NDEGQLGDGTTSALHRPRLVHA-LQGKKITRVACGSAHTLA 290

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
            ++A    +             R   S P E + +K+L
Sbjct: 291 WSTAKATQS-------------RMPASTPMEYDLVKDL 315



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 97/198 (48%), Gaps = 16/198 (8%)

Query: 445 VPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG 502
           +P  +E+++   +K V  S G  H  A+             S   +++WG+G +G+LGHG
Sbjct: 2   IPTLLESIQHVFIKKVAVSSGGKHCIALS------------SEGHVYSWGEGDDGKLGHG 49

Query: 503 DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT 562
           +      P  ++    +    +ACG   + A+T+ G +++ G   YG+LG   S  +   
Sbjct: 50  NKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRP 109

Query: 563 RIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           ++   ++   + D+ACGS       V+    V++WG G  G+LG G ++  + P  +++L
Sbjct: 110 KVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSL 169

Query: 621 RDKQVKSVVCGSNFTAAI 638
               V  V CGS F+ A+
Sbjct: 170 AGLGVVKVECGSQFSVAL 187


>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
 gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
          Length = 1935

 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 201/406 (49%), Gaps = 70/406 (17%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE-----STVVLDAQSIACGSKH 307
            G+++ WG    +G LG   +G+E++    +   LPK ++     S + +    + CG +H
Sbjct: 1141 GELYTWGSN-QSGQLG---HGLEVN----KTLSLPKRVDFFRGKSPIFM----VECGGEH 1188

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
             + V     ++SWG    G+LGHG +A + S PK+I+ L G  I  +A G  H   +  S
Sbjct: 1189 TIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNIVLKKS 1248

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKV--SGQMEGLQ------ISSICCGPWHTAAI 418
            G+L+++G G  + G LG  S  S  IP ++  +  M GLQ      I+ I CG  H+   
Sbjct: 1249 GELFSFGYG--DFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHSVIC 1306

Query: 419  TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
            +  G+++++G G  G LGH    + S PR +ETL+ +  +  SCG +HT A  ++     
Sbjct: 1307 SENGEVYSWGLGKQGQLGHKVFENISKPRLIETLRGVTKI--SCGHFHTVATTDL----- 1359

Query: 479  GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT--- 535
                   K +++WG G   +LGH   +   VP  V      +  KV CG + T+ +T   
Sbjct: 1360 -------KNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTITFPD 1412

Query: 536  ------------------ATGQVFSMGSADYGQLG------SPGSTGKFPTRIEGNIKHR 571
                              ++  +++ GSA++G+LG      SP      PT I+G +   
Sbjct: 1413 DLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKG-VNSL 1471

Query: 572  YIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLV 617
             + DI+CGS   A+++S + +Y WG G  GQ+G+G N++   PT +
Sbjct: 1472 NLIDISCGSDFSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTRI 1517



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 180/391 (46%), Gaps = 62/391 (15%)

Query: 298  AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD--VSYPKLIDALNG-SNIHMVA 354
            A  ++CG  H  ++T  G++++WG    G+LGHG+E +  +S PK +D   G S I MV 
Sbjct: 1124 AIKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVE 1183

Query: 355  CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            CG  HT AV  +  +Y+WG      G LG  ++  +    KV  ++ G +I +I  G  H
Sbjct: 1184 CGGEHTIAVDSNYFVYSWGSD--KFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAH 1241

Query: 415  TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL---------KTVMASCGVW 465
               +  +G+LF+FG G FG LG G   S ++P  +E    +         K    +CG  
Sbjct: 1242 NIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFG 1301

Query: 466  HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISF 521
            H+    E        NG    ++++WG G +GQLGH   E    PR++     V+     
Sbjct: 1302 HSVICSE--------NG----EVYSWGLGKQGQLGHKVFENISKPRLIETLRGVT----- 1344

Query: 522  CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
             K++CGH  T+A T    V+S GS ++ +LG      +   ++      + +  + CG  
Sbjct: 1345 -KISCGHFHTVATTDLKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVVCGQN 1403

Query: 582  HIAVVS---------------------SKSEVYTWGKGANGQLGHGDNE-----NKQTPT 615
            H   ++                     S S +Y WG   +G+LG G +      +K  PT
Sbjct: 1404 HTMTITFPDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPT 1463

Query: 616  LVEALRDKQVKSVVCGSNFTAAICLHKGVSI 646
             ++ +    +  + CGS+F+A I  +  + +
Sbjct: 1464 AIKGVNSLNLIDISCGSDFSAMITSNNAIYV 1494



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 116/243 (47%), Gaps = 43/243 (17%)

Query: 301  IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
            IACG  H+V+ ++ G+++SWG G  G+LGH V  ++S P+LI+ L G  +  ++CG FHT
Sbjct: 1296 IACGFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETLRG--VTKISCGHFHT 1353

Query: 361  CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT- 419
             A T   ++Y+WG G H    LG  S+    +P+ V   ++   +S + CG  HT  IT 
Sbjct: 1354 VATTDLKNVYSWGSGEH--MKLGHSSDKDESVPKVVDFFIQK-NVSKVVCGQNHTMTITF 1410

Query: 420  --------------------SAGKLFTFGDGTFGALGH-GDRSS----TSVPREVETLKE 454
                                S+  ++ +G    G LG  GD  S      +P  ++ +  
Sbjct: 1411 PDDLNNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGDLKSPFFDKPIPTAIKGVNS 1470

Query: 455  LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
            L  +  SCG   +A I             S+  ++ WG G  GQ+G+G  +   VP  + 
Sbjct: 1471 LNLIDISCGSDFSAMIT------------SNNAIYVWGCGRFGQIGNGKNDDVWVPTRIS 1518

Query: 515  VSD 517
            ++D
Sbjct: 1519 LND 1521


>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
           [Rhipicephalus pulchellus]
          Length = 1480

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 192/388 (49%), Gaps = 27/388 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +  WG     G LGG V G ++         LP   E+   L    +  G +    VT
Sbjct: 581 GTILGWGHN-HRGQLGG-VEGAKVK--------LPMPCEALSALRPIQVVGGEQTLFAVT 630

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLY 370
             G++++ G G+GG+LG G    VS P L+++L    I  V    G  H  A++  G++Y
Sbjct: 631 ADGKVYATGYGAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVY 690

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WG+G  + G LG  ++ S   PR +   + G ++  + CG  H+A IT++G+L+T+G G
Sbjct: 691 SWGEG--DDGKLGHGNKSSCERPRVIE-SLRGKEVVDVACGGAHSACITASGELYTWGKG 747

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            +G LGHGD      P++VE L   +    +CG          +G            +++
Sbjct: 748 RYGRLGHGDSDDQLRPKKVEALSGWRVRCVACG----------SGDAQTLCVTDDDCVWS 797

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WGDG  G+LG G ++   VPL V +   +   +V CG   ++ALTA+G V++ G  DY +
Sbjct: 798 WGDGDYGKLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVALTASGSVYTWGKGDYHR 857

Query: 551 LG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG       + P R+   ++ + +  IA GS H    +   EVYTWG    GQLG G   
Sbjct: 858 LGHGTDDHVRRPKRVAA-LQGKKVICIAVGSLHCVACTDTGEVYTWGDNDEGQLGDGTVN 916

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
               P LV AL+ K++  V CGS  T A
Sbjct: 917 AIHKPRLVAALQGKKINRVSCGSAHTVA 944



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 149/306 (48%), Gaps = 19/306 (6%)

Query: 287 PKVLEST--VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
           P +LES   V +    +  G KH + ++ +G+++SWGEG  GKLGHG ++    P++I++
Sbjct: 657 PTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIES 716

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           L G  +  VACG  H+  +T SG+LYTWG G +  G LG         P+KV   + G +
Sbjct: 717 LRGKEVVDVACGGAHSACITASGELYTWGKGRY--GRLGHGDSDDQLRPKKVEA-LSGWR 773

Query: 405 ISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
           +  + CG     T  +T    ++++GDG +G LG G      VP  V+ L+ +  +   C
Sbjct: 774 VRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMGVIRVEC 833

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
           G   + A+             +S  ++TWG G   +LGHG  +    P  V         
Sbjct: 834 GSQFSVALT------------ASGSVYTWGKGDYHRLGHGTDDHVRRPKRVAALQGKKVI 881

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
            +A G    +A T TG+V++ G  D GQLG          R+   ++ + I  ++CGS H
Sbjct: 882 CIAVGSLHCVACTDTGEVYTWGDNDEGQLGDGTVNAIHKPRLVAALQGKKINRVSCGSAH 941

Query: 583 IAVVSS 588
               S+
Sbjct: 942 TVAWST 947



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 115/236 (48%), Gaps = 23/236 (9%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           G+++ WG+G    LG+G              D  D L PK +E+      + +ACGS  A
Sbjct: 739 GELYTWGKGRYGRLGHG--------------DSDDQLRPKKVEALSGWRVRCVACGSGDA 784

Query: 309 --VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
             + VT    ++SWG+G  GKLG G       P  +D L G  +  V CG   + A+T S
Sbjct: 785 QTLCVTDDDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVALTAS 844

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
           G +YTWG G ++   LG  ++     P++V+  ++G ++  I  G  H  A T  G+++T
Sbjct: 845 GSVYTWGKGDYHR--LGHGTDDHVRRPKRVAA-LQGKKVICIAVGSLHCVACTDTGEVYT 901

Query: 427 FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           +GD   G LG G  ++   PR V  L+  K    SCG  HT A       T+G+ G
Sbjct: 902 WGDNDEGQLGDGTVNAIHKPRLVAALQGKKINRVSCGSAHTVAWSTCNPSTAGACG 957



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 133/279 (47%), Gaps = 23/279 (8%)

Query: 366 SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
           SG +  WG   HN  G LG V      +P      +  L+   +  G     A+T+ GK+
Sbjct: 580 SGTILGWG---HNHRGQLGGVEGAKVKLPMPCEA-LSALRPIQVVGGEQTLFAVTADGKV 635

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           +  G G  G LG G   S S P  +E+L+   +K V+ + G  H  A+            
Sbjct: 636 YATGYGAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALS----------- 684

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
            +  ++++WG+G +G+LGHG+      P  ++         VACG + +  +TA+G++++
Sbjct: 685 -AEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITASGELYT 743

Query: 543 MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
            G   YG+LG   S  +  P ++E     R +  +ACGS       V+    V++WG G 
Sbjct: 744 WGKGRYGRLGHGDSDDQLRPKKVEALSGWR-VRCVACGSGDAQTLCVTDDDCVWSWGDGD 802

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G ++  + P  V+ L+   V  V CGS F+ A+
Sbjct: 803 YGKLGRGGSDGCKVPLRVDLLQGMGVIRVECGSQFSVAL 841



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/109 (38%), Positives = 68/109 (62%)

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
           +AL+A G+V+S G  D G+LG    +     R+  +++ + + D+ACG  H A +++  E
Sbjct: 681 LALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITASGE 740

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           +YTWGKG  G+LGHGD++++  P  VEAL   +V+ V CGS     +C+
Sbjct: 741 LYTWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRCVACGSGDAQTLCV 789


>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
 gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
          Length = 435

 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/349 (32%), Positives = 177/349 (50%), Gaps = 47/349 (13%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA------------------CGE 357
           ++++WG G+ G++GHG E     P LI  L  +    +A                  CG 
Sbjct: 36  EVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGL 95

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           FH+       D++ WG G  + G LG  +E + + P  V+ +++ +Q++S   G  H  A
Sbjct: 96  FHSVLFAEQ-DVFVWGKG--DGGRLGIDTEFNQYKPY-VNPRIKRVQMAS--AGGLHNIA 149

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +T  G ++T+G G FGALGHG      +PR +E   + + V  S G  HTAA+ E     
Sbjct: 150 LTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHTAAVTE----- 204

Query: 478 SGSNGLSSKKLFTWG-DGAEGQLGHGDAEPRVV-------PLCVKVSDDISFCKVACGHS 529
                  S +L+TWG D  EG+LGHG+  P ++       P  V+ + D+    V CG  
Sbjct: 205 -------SGELYTWGRDEGEGRLGHGN--PDIMDEGALSRPTKVQ-ALDVPIALVYCGGF 254

Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
            T+ALT +GQ++S G     +LG       +  ++   ++   +  +ACG +H A ++  
Sbjct: 255 FTMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQD 314

Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            +V TWG G NGQLGHG  EN + P +VEA+ DK    + CG  +TAAI
Sbjct: 315 GKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAI 363



 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 116/353 (32%), Positives = 173/353 (49%), Gaps = 34/353 (9%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           + CG  H+VL  +Q  +F WG+G GG+LG   E +   P +   +    + M + G  H 
Sbjct: 91  VTCGLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPYVNPRIK--RVQMASAGGLHN 147

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T  G++YTWG G    G LG  S     +PR + G  +  +I  +  G  HTAA+T 
Sbjct: 148 IALTEVGNVYTWGYGA--FGALGHGSYERELLPRLLEGPWKD-RIVHVSAGGSHTAAVTE 204

Query: 421 AGKLFTFG-DGTFGALGHG-----DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           +G+L+T+G D   G LGHG     D  + S P +V+ L ++   +  CG + T A+ +  
Sbjct: 205 SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQAL-DVPIALVYCGGFFTMALTK-- 261

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                     S +L++WG  A  +LGHG       P  V   +D++  +VACG     AL
Sbjct: 262 ----------SGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAAL 311

Query: 535 TATGQVFSMGSADYGQLGSPG-STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
           T  G+V + G    GQLG      GK P  +E  +  +    IACG    A ++   ++Y
Sbjct: 312 TQDGKVITWGYGGNGQLGHGTLENGKEPAIVEA-MADKTCTYIACGPAWTAAITENGDLY 370

Query: 594 TWGKGANGQLG-HGDNENKQTPTLV---EALRDK---QVKSVVCGSNFTAAIC 639
           TWGK  + QLG  G  + +  P LV   +AL +K   +V  V CG+N    I 
Sbjct: 371 TWGKNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIV 423



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 151/307 (49%), Gaps = 32/307 (10%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           DVF+WG+G G  L      G++      +  + P++         Q  + G  H + +T+
Sbjct: 105 DVFVWGKGDGGRL------GIDTEFNQYKPYVNPRIKR------VQMASAGGLHNIALTE 152

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G +++WG G+ G LGHG       P+L++      I  V+ G  HT AVT SG+LYTWG
Sbjct: 153 VGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHTAAVTESGELYTWG 212

Query: 374 DGIHNLGLLGQ-----VSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
                 G LG      + E +   P KV  Q   + I+ + CG + T A+T +G+L+++G
Sbjct: 213 RD-EGEGRLGHGNPDIMDEGALSRPTKV--QALDVPIALVYCGGFFTMALTKSGQLWSWG 269

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
                 LGHG R++   P+ V  L+++  V  +CG +H AA+ +              K+
Sbjct: 270 GNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQ------------DGKV 317

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            TWG G  GQLGHG  E    P  V+   D +   +ACG + T A+T  G +++ G    
Sbjct: 318 ITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRD 377

Query: 549 GQLGSPG 555
            QLG PG
Sbjct: 378 YQLGIPG 384



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 105/226 (46%), Gaps = 15/226 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+++ WG   G G LG     +    A  R   + + L+  + L    + CG    + +T
Sbjct: 206 GELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKV-QALDVPIAL----VYCGGFFTMALT 260

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG  +  +LGHG  A+   PK++ AL    +  VACG FH  A+T  G + TW
Sbjct: 261 KSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITW 320

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---D 429
           G G +  G LG  +  +   P  V   M     + I CGP  TAAIT  G L+T+G   D
Sbjct: 321 GYGGN--GQLGHGTLENGKEPAIVE-AMADKTCTYIACGPAWTAAITENGDLYTWGKNRD 377

Query: 430 GTFGALGHGDRSSTSV----PREVETLKELKTVMASCGVWHTAAIV 471
              G  G  D     V    P+ +     ++ +  SCG  H   IV
Sbjct: 378 YQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIV 423



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 6/151 (3%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           E+    R +   PKV+ +   +    +ACG  HA  +T+ G++ +WG G  G+LGHG   
Sbjct: 275 ELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNGQLGHGTLE 334

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLG----QVSEIS 389
           +   P +++A+       +ACG   T A+T +GDLYTWG +  + LG+ G    Q+  + 
Sbjct: 335 NGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQLGIPGLKDEQLDPVL 394

Query: 390 HWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
              P+ +  +   +++  + CG  H   I S
Sbjct: 395 VQFPQALH-EKTPVEVLGVSCGANHGVCIVS 424


>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
 gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
          Length = 1152

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 176/355 (49%), Gaps = 32/355 (9%)

Query: 287 PKVLESTVVLDAQSIACG--SKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
           P+++ES    +   +A     KH + +T +G+++SWG G GG+LGHG + +V Y      
Sbjct: 180 PQLMESLADKEVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHG-DTNVCY------ 232

Query: 345 LNGSNIHMVACGEF----HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP---RKVS 397
             G  + ++         H  A+T  G++Y+WG+G  + G LG     S   P   R +S
Sbjct: 233 -KGQKVLVIVYPYHPEGKHYMALTSEGEVYSWGNG--DGGRLGHGDTNSREEPTLVRGLS 289

Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
           G+  G  +  I CG  ++AAIT+ G+LFT+G G +G LGHG       P  V +LK  + 
Sbjct: 290 GKQLGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRV 349

Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
           +   CG      +      T          +++WGDG  G+LG G ++    P  +    
Sbjct: 350 IDICCGSGDAQTLAVTDDGT----------VWSWGDGDYGKLGRGGSDGCKTPKIIDRLQ 399

Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDI 576
                +V CG   ++ALT TG +++ G  D  +LG       +FP ++EG ++ + + D+
Sbjct: 400 GQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEG-LRGKKVVDV 458

Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
           A GS H  V++ + EVY WG+   GQLG      K  PTL+  L  K +  + CG
Sbjct: 459 AVGSMHCLVMTEEGEVYGWGRNDQGQLGDSSFSTKSDPTLM-PLDGKSISGIACG 512



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 167/350 (47%), Gaps = 47/350 (13%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
           L    +AC  +  + +TK G+++     S          +   P+L+++L    +  VA 
Sbjct: 147 LGVLQLACAERCLIALTKTGRVYMCFYSS----------ESQGPQLMESLADKEVLKVAA 196

Query: 356 GE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
                H  A+T  G++Y+WG+G  + G LG       +  +KV           +   P+
Sbjct: 197 HPEGKHYMALTSEGEVYSWGNG--DGGRLGHGDTNVCYKGQKVL----------VIVYPY 244

Query: 414 HT-----AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL--KEL--KTVMASCGV 464
           H       A+TS G+++++G+G  G LGHGD +S   P  V  L  K+L    V   CG 
Sbjct: 245 HPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHIVCGS 304

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
            ++AAI             +  +LFTWG G  G+LGHG +E ++ P  V          +
Sbjct: 305 TYSAAIT------------ADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDI 352

Query: 525 ACG--HSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
            CG   + T+A+T  G V+S G  DYG+LG  GS G    +I   ++ + I  + CG+  
Sbjct: 353 CCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQDIVRVCCGAQF 412

Query: 583 IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
              ++    ++TWGKG + +LGHG  E+ + P  +E LR K+V  V  GS
Sbjct: 413 SLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGS 462



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 141/293 (48%), Gaps = 32/293 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+V+ WG G G  L  G  N  E  +  R   L  K L   VV     I CGS ++  +T
Sbjct: 258 GEVYSWGNGDGGRLGHGDTNSREEPTLVR--GLSGKQLGRHVV----HIVCGSTYSAAIT 311

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
             G++F+WG G+ G+LGHG   D   P L+ +L G  +  + CG  +  T AVT  G ++
Sbjct: 312 ADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCGSGDAQTLAVTDDGTVW 371

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG+        P K+  +++G  I  +CCG   + A+T  G ++T+G G
Sbjct: 372 SWGDG--DYGKLGRGGSDGCKTP-KIIDRLQGQDIVRVCCGAQFSLALTKTGHIWTWGKG 428

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
               LGHG       P+++E L+  K V  + G  H   + E              +++ 
Sbjct: 429 DSQRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGSMHCLVMTE------------EGEVYG 476

Query: 491 WGDGAEGQLGHGD----AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
           WG   +GQLG       ++P ++PL     D  S   +ACG + +   T+TG 
Sbjct: 477 WGRNDQGQLGDSSFSTKSDPTLMPL-----DGKSISGIACGPAQSFCWTSTGH 524



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 66/231 (28%), Positives = 117/231 (50%), Gaps = 22/231 (9%)

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           H  A+TS G+++++G+G  G LGHGD              + + V+     +H      +
Sbjct: 202 HYMALTSEGEVYSWGNGDGGRLGHGD---------TNVCYKGQKVLVIVYPYHPEGKHYM 252

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK----VACGHS 529
           A  + G       ++++WG+G  G+LGHGD   R  P  V+        +    + CG +
Sbjct: 253 ALTSEG-------EVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHIVCGST 305

Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS--YHIAVVS 587
            + A+TA G++F+ G  +YG+LG   S  +    +  ++K R + DI CGS       V+
Sbjct: 306 YSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCGSGDAQTLAVT 365

Query: 588 SKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               V++WG G  G+LG G ++  +TP +++ L+ + +  V CG+ F+ A+
Sbjct: 366 DDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQDIVRVCCGAQFSLAL 416



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 70/169 (41%), Gaps = 52/169 (30%)

Query: 518 DISFCKVACGHSITIALTAT---------------------------------------- 537
           ++   ++AC     IALT T                                        
Sbjct: 146 ELGVLQLACAERCLIALTKTGRVYMCFYSSESQGPQLMESLADKEVLKVAAHPEGKHYMA 205

Query: 538 ----GQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
               G+V+S G+ D G+LG   +   +  +    I + Y  +      H   ++S+ EVY
Sbjct: 206 LTSEGEVYSWGNGDGGRLGHGDTNVCYKGQKVLVIVYPYHPE----GKHYMALTSEGEVY 261

Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDKQ----VKSVVCGSNFTAAI 638
           +WG G  G+LGHGD  +++ PTLV  L  KQ    V  +VCGS ++AAI
Sbjct: 262 SWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHIVCGSTYSAAI 310


>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 393

 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 195/396 (49%), Gaps = 37/396 (9%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           VF WG G    L  G+     I S+   + L P++LE+    +   +  G+ H+  + K+
Sbjct: 7   VFTWGTGTQGQLGHGSFEKTGIRSS--YEELSPRILETFEGKNIAKLDFGATHSAAIDKE 64

Query: 315 GQIFSWGEGSGGKLGHGV-EADV-SYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           G++++WG     +LGHG    D+ S P+++DAL G  I  ++CGE+HT AV   G L+TW
Sbjct: 65  GKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVDEEGKLFTW 124

Query: 373 GDG---IHNLGLLGQVSEISHWIPRKVSGQM-EGLQISSICCGPWHTAAITSAGKLFTFG 428
           G G   +   G LG        IPR V   + +G+ + S+ CG  HT A+T  G+++ +G
Sbjct: 125 GWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEIWAWG 184

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           +G +G LG+G   +  VP  VE   +      S G   T AI E              ++
Sbjct: 185 NGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITE------------HGEV 232

Query: 489 FTWGDGAEGQLGHGDA------EPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
           ++WG  +  QLG G            +P+ V+   +++  +V+ G+    A+T  G++F 
Sbjct: 233 YSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVTNDGKMFM 292

Query: 543 MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
            G+  + +          P  +   +K   I  + CG Y+ A +S+   ++T+GKG +  
Sbjct: 293 WGAKLWLE----------PHEMT-ILKDETIISVQCGRYYTAALSASGNLFTFGKGHSNC 341

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           LGHG+ + +  P LVE+L    V S+ CG +   A+
Sbjct: 342 LGHGERKTQLQPLLVESLNRYNVVSMTCGYSHMGAL 377



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 144/294 (48%), Gaps = 45/294 (15%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTV--VLDAQSIACGSK 306
           G +F WG G     G+G LG          A   D  +P+++ + V   +  +S+ CG  
Sbjct: 119 GKLFTWGWGGSTMKGSGALG---------HAGGEDESIPRLVRTLVDQGVPVKSVECGEL 169

Query: 307 HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
           H V +TK G+I++WG G  G+LG+G   +   P+ ++     NI  ++ G   T A+T  
Sbjct: 170 HTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEH 229

Query: 367 GDLYTWGDGIHN-LGLLGQVSEISHW----IPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           G++Y+WG   H+ LGL G ++ + ++    IP  V   +  + ++ +  G  H AA+T+ 
Sbjct: 230 GEVYSWGINSHSQLGLGGGLT-VDYYNMETIPVVVE-ALSNVNVAQVSAGYDHAAAVTND 287

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           GK+F +G   +             P E+  LK+   +   CG ++TAA+           
Sbjct: 288 GKMFMWGAKLW-----------LEPHEMTILKDETIISVQCGRYYTAALS---------- 326

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +S  LFT+G G    LGHG+ + ++ PL V+  +  +   + CG+S   ALT
Sbjct: 327 --ASGNLFTFGKGHSNCLGHGERKTQLQPLLVESLNRYNVVSMTCGYSHMGALT 378



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 108/241 (44%), Gaps = 29/241 (12%)

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSV--------PREVETLKELKTVMASCGVWHTAA 469
           +++   +FT+G GT G LGHG    T +        PR +ET +         G  H+AA
Sbjct: 1   MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAA 60

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV--VPLCVKVSDDISFCKVACG 527
           I +              KL+TWG     QLGHG +   +  +P  V     I    ++CG
Sbjct: 61  IDK------------EGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCG 108

Query: 528 HSITIALTATGQVFSMGSADY-----GQLGSPGSTGKFPTRIEGNIKHRYI--EDIACGS 580
              T A+   G++F+ G         G LG  G   +   R+   +  + +  + + CG 
Sbjct: 109 EYHTGAVDEEGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGVPVKSVECGE 168

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            H   ++   E++ WG G  G+LG+G ++N + P  VE   D+ + S+  G +FT AI  
Sbjct: 169 LHTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITE 228

Query: 641 H 641
           H
Sbjct: 229 H 229


>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
 gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
          Length = 435

 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 114/349 (32%), Positives = 177/349 (50%), Gaps = 47/349 (13%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA------------------CGE 357
           ++++WG G+ G++GHG E     P LI  L  +    +A                  CG 
Sbjct: 36  EVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTCGL 95

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           FH+       D++ WG G  + G LG  +E + + P  V+ +++ +Q++S   G  H  A
Sbjct: 96  FHSVLFAEQ-DVFVWGKG--DGGRLGIDTEFNQYKPY-VNPRIKRVQMAS--AGGLHNIA 149

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +T  G ++T+G G FGALGHG      +PR +E   + + V  S G  H+AA+ E     
Sbjct: 150 LTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHSAAVTE----- 204

Query: 478 SGSNGLSSKKLFTWG-DGAEGQLGHGDAEPRVV-------PLCVKVSDDISFCKVACGHS 529
                  S +L+TWG D  EG+LGHG+  P ++       P  V+ + D+    V CG  
Sbjct: 205 -------SGELYTWGRDEGEGRLGHGN--PDIMDEGALSRPTKVQ-ALDVPIASVYCGGF 254

Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
            T+ALT +GQ++S G     +LG       +  ++   ++   +  +ACG +H A ++  
Sbjct: 255 FTMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQD 314

Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            +V TWG G NGQLGHG  EN + P +VEA+ DK    + CG  +TAAI
Sbjct: 315 GKVITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAI 363



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 172/353 (48%), Gaps = 34/353 (9%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           + CG  H+VL  +Q  +F WG+G GG+LG   E +   P +   +    + M + G  H 
Sbjct: 91  VTCGLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPYVNPRIK--RVQMASAGGLHN 147

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T  G++YTWG G    G LG  S     +PR + G  +  +I  +  G  H+AA+T 
Sbjct: 148 IALTEVGNVYTWGYGA--FGALGHGSYERELLPRLLEGPWKD-RIVHVSAGGSHSAAVTE 204

Query: 421 AGKLFTFG-DGTFGALGHG-----DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           +G+L+T+G D   G LGHG     D  + S P +V+ L ++      CG + T A+ +  
Sbjct: 205 SGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQAL-DVPIASVYCGGFFTMALTK-- 261

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                     S +L++WG  A  +LGHG       P  V   +D++  +VACG     AL
Sbjct: 262 ----------SGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAAL 311

Query: 535 TATGQVFSMGSADYGQLGSPG-STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
           T  G+V + G    GQLG      GK P  +E  +  +    IACG    A ++   ++Y
Sbjct: 312 TQDGKVITWGYGGNGQLGHGTLENGKEPAIVEA-MADKTCTYIACGPAWTAAITENGDLY 370

Query: 594 TWGKGANGQLG-HGDNENKQTPTLV---EALRDK---QVKSVVCGSNFTAAIC 639
           TWGK  + QLG  G  + +  P LV   +AL +K   +V  V CG+N    I 
Sbjct: 371 TWGKNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIV 423



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/307 (32%), Positives = 152/307 (49%), Gaps = 32/307 (10%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           DVF+WG+G G  L      G++      +  + P++         Q  + G  H + +T+
Sbjct: 105 DVFVWGKGDGGRL------GIDTEFNQYKPYVNPRIKR------VQMASAGGLHNIALTE 152

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G +++WG G+ G LGHG       P+L++      I  V+ G  H+ AVT SG+LYTWG
Sbjct: 153 VGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVHVSAGGSHSAAVTESGELYTWG 212

Query: 374 DGIHNLGLLGQ-----VSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
                 G LG      + E +   P KV  Q   + I+S+ CG + T A+T +G+L+++G
Sbjct: 213 RD-EGEGRLGHGNPDIMDEGALSRPTKV--QALDVPIASVYCGGFFTMALTKSGQLWSWG 269

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
                 LGHG R++   P+ V  L+++  V  +CG +H AA+ +              K+
Sbjct: 270 GNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQ------------DGKV 317

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            TWG G  GQLGHG  E    P  V+   D +   +ACG + T A+T  G +++ G    
Sbjct: 318 ITWGYGGNGQLGHGTLENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRD 377

Query: 549 GQLGSPG 555
            QLG PG
Sbjct: 378 YQLGIPG 384



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 106/226 (46%), Gaps = 15/226 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+++ WG   G G LG     +    A  R    P  +++  V  A S+ CG    + +T
Sbjct: 206 GELYTWGRDEGEGRLGHGNPDIMDEGALSR----PTKVQALDVPIA-SVYCGGFFTMALT 260

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG  +  +LGHG  A+   PK++ AL    +  VACG FH  A+T  G + TW
Sbjct: 261 KSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITW 320

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---D 429
           G G +  G LG  +  +   P  V   M     + I CGP  TAAIT  G L+T+G   D
Sbjct: 321 GYGGN--GQLGHGTLENGKEPAIVE-AMADKTCTYIACGPAWTAAITENGDLYTWGKNRD 377

Query: 430 GTFGALGHGDRSSTSV----PREVETLKELKTVMASCGVWHTAAIV 471
              G  G  D     V    P+ +     ++ +  SCG  H   IV
Sbjct: 378 YQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIV 423



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 6/151 (3%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           E+    R +   PKV+ +   +    +ACG  HA  +T+ G++ +WG G  G+LGHG   
Sbjct: 275 ELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNGQLGHGTLE 334

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLG----QVSEIS 389
           +   P +++A+       +ACG   T A+T +GDLYTWG +  + LG+ G    Q+  + 
Sbjct: 335 NGKEPAIVEAMADKTCTYIACGPAWTAAITENGDLYTWGKNRDYQLGIPGLKDEQLDPVL 394

Query: 390 HWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
              P+ +  +   +++  + CG  H   I S
Sbjct: 395 VQFPQALH-EKTPVEVLGVSCGANHGVCIVS 424


>gi|94983836|gb|ABF50623.1| G93-GW [Glycine max]
          Length = 466

 Score =  166 bits (421), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 170/311 (54%), Gaps = 19/311 (6%)

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           QLG GD E++ TP  VEALRD+QV ++ CG +FTAAI LHK +SI+D S C+GCR  F F
Sbjct: 2   QLGLGDTEDRYTPCFVEALRDRQVNTITCGPSFTAAISLHKPISISDQSTCTGCRLPFGF 61

Query: 662 RRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPR 721
            R++HNCYNCGL++C+ CSSKK     LAP  +K +RVCD CF K    + S   S+   
Sbjct: 62  TRKKHNCYNCGLLFCRACSSKKITNAPLAPSKSKAFRVCDQCFDKRQGGAHSVMASKSRN 121

Query: 722 -NSSGLFQNCKRVTE-KENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNK 779
            N+  + ++  ++++  E+    + T G     G+S +     +G+  W+ + +  +  +
Sbjct: 122 YNTQQVLKHQHKISDVTEDRGETTVTQGPMLSLGQSCYRKSMPSGRKDWKNHQEIQQDVE 181

Query: 780 ISASPPGSR-RVSRAPSP----ISRKSSPACSIT-----MNSFTDLANSEVIFEYSKQTN 829
            S+S  G   +  + P P    I+   +P   ++     + + +        + +S    
Sbjct: 182 DSSSMLGGMPQWGQVPCPAMFQINCTENPVVHVSSSKNKLATVSPFNVESTAYNFSSNVE 241

Query: 830 DNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQ-------IAQEEAEKNKAAQ 882
            +  +   VL  ++  L  +++ LE + E  +RK++E  Q       +A+EEA K KAA+
Sbjct: 242 TDTTKSDKVLLEEVHRLRAEAKRLEEQCELKNRKIQECRQKIEESWFVAREEAAKCKAAK 301

Query: 883 EVIRSLTAQAR 893
           EVI++L  +AR
Sbjct: 302 EVIKALALRAR 312


>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 1859

 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 204/425 (48%), Gaps = 41/425 (9%)

Query: 223 SSTADSFRISLS---SAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSA 279
           SS+ D+  +S S   + V+S+         D    +  WG    N  LG    G E S A
Sbjct: 555 SSSGDNTLLSSSPQLTGVNSNDSSRSATQLDTQRGIMTWGSS-SNCKLGFKTEGREQSQA 613

Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSG-----GKLGHGVEA 334
                  P+ L +  + +  SI+CGS ++  +T+ G ++ WG GS        LG+G   
Sbjct: 614 T------PERLPNFNIPEICSISCGSYYSAALTENGDVYMWGRGSVKNPPLSTLGNGSLE 667

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
           D   P  +++L  S + +V+ G +H+ A+  +G+L TWG G    G LG    ++  IP 
Sbjct: 668 DQLLPTKVESL--SEVVLVSIGYYHSAALKSNGELLTWGCGED--GQLGHGDVLNQTIP- 722

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           KV   M    ++ + CG  HT  +T  GK+FT+G   +G LG GD      P  V +L++
Sbjct: 723 KVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLEK 782

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
              +  +CG  H A +             +++++  +G+GA      G A    VP+ V 
Sbjct: 783 YNIIQIACGSTHCAVLT------------NAREVLVFGNGA----AMGSANIISVPMMVP 826

Query: 515 VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIE 574
               ++  +++CGH  T ALT  G V++ GS    +LG   +  +   ++   ++ + I 
Sbjct: 827 ALKHLNIERLSCGHYSTAALTECGDVYTWGSGQ--ELGHGTNQSELHPKLVDGLRSQSIR 884

Query: 575 DIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD-NENKQTPTLVEALRDKQVKSVVCGSN 633
            I+CG  H+A ++   ++YT GK   GQLGH   ++NK  P  +++L      SV CG N
Sbjct: 885 QISCGGRHMAFLTDSGKIYTCGKDPFGQLGHAQGDQNK--PKKIDSLLKTTFISVSCGEN 942

Query: 634 FTAAI 638
             A++
Sbjct: 943 HNASL 947



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 136/292 (46%), Gaps = 38/292 (13%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++  WG G  +G LG           D  +  +PKV+++        + CG KH + +T
Sbjct: 698 GELLTWGCG-EDGQLG---------HGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLT 747

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K G++F+WG    G+LG G       P L+ +L   NI  +ACG  H   +T + ++  +
Sbjct: 748 KNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVF 807

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           G+G      +G  + IS  +P  V   ++ L I  + CG + TAA+T  G ++T+G G  
Sbjct: 808 GNG----AAMGSANIIS--VPMMVPA-LKHLNIERLSCGHYSTAALTECGDVYTWGSGQ- 859

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
             LGHG   S   P+ V+ L+       SCG  H A + +            S K++T G
Sbjct: 860 -ELGHGTNQSELHPKLVDGLRSQSIRQISCGGRHMAFLTD------------SGKIYTCG 906

Query: 493 DGAEGQLGHGDAE---PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
               GQLGH   +   P+ +   +K     +F  V+CG +   +L  T + F
Sbjct: 907 KDPFGQLGHAQGDQNKPKKIDSLLKT----TFISVSCGENHNASLFDTTRSF 954



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 22/242 (9%)

Query: 424 LFTFGDGTFGALG---HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           + T+G  +   LG    G   S + P  +      +    SCG +++AA+ E        
Sbjct: 590 IMTWGSSSNCKLGFKTEGREQSQATPERLPNFNIPEICSISCGSYYSAALTE-------- 641

Query: 481 NGLSSKKLFTWGDGAE-----GQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
           NG     ++ WG G+        LG+G  E +++P  V+   ++    +   HS   AL 
Sbjct: 642 NG----DVYMWGRGSVKNPPLSTLGNGSLEDQLLPTKVESLSEVVLVSIGYYHSA--ALK 695

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
           + G++ + G  + GQLG      +   ++   +   ++  + CG  H   ++   +V+TW
Sbjct: 696 SNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLTKNGKVFTW 755

Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGC 655
           G    GQLG GD +   TP LV +L    +  + CGS   A +   + V +  +    G 
Sbjct: 756 GTSEYGQLGLGDTQKNCTPMLVTSLEKYNIIQIACGSTHCAVLTNAREVLVFGNGAAMGS 815

Query: 656 RN 657
            N
Sbjct: 816 AN 817


>gi|403364753|gb|EJY82151.1| RCC1 domain containing protein [Oxytricha trifallax]
          Length = 1344

 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 199/458 (43%), Gaps = 103/458 (22%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVL---ESTVVLDAQSIACGSKHAVL 310
           ++F WG G    L  G           R D   P+ L   +       + IACG  H++ 
Sbjct: 309 ELFSWGSGQYGALGFGT----------RDDIFEPRHLIIEKKDYTYFIEGIACGKYHSMC 358

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           +T++ +I +WG+G GG+LGHG E DV  PK I  L+      ++ GE H+ A++   +LY
Sbjct: 359 LTRKKKILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKKKPIFISAGESHSAAISEKLNLY 418

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           TWG G +  G LG   + S   P+ +   ++  +I  + CG +HT AIT  G ++ FG G
Sbjct: 419 TWGTGTY--GRLGHGMDTSEKKPKLIE-DLDQYEIIHVSCGAFHTLAITGQGTVYAFGQG 475

Query: 431 TFGALGHGDRSSTSV---------------PREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +G LG   +    V               P+E+    + + ++A+ G  H+  + +   
Sbjct: 476 KYGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQDKNEAILAAAGYNHSLCLAK--- 532

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV---------------------- 513
                    S K+++WG   +G LG        +P+ +                      
Sbjct: 533 ---------SGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQRGD 583

Query: 514 -KVSDDISF--CKVACGHSITIALTATGQVFSMGSADYGQLGSPG--------------- 555
            K  +  S+   +VACG   T++LT  G+V+  GS  YGQL                   
Sbjct: 584 LKQEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQNN 643

Query: 556 --------------STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
                         S  KFP   E  ++  Y   IACG  HI  +S  +E++ WG+   G
Sbjct: 644 NNDNSQALDSSEQMSLIKFPG--ETTVRINY---IACGGEHIFAISRMNELFGWGRNDEG 698

Query: 602 QLGHG-DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           QLG G  ++    PTL+  +  K ++ + CG N++AA+
Sbjct: 699 QLGLGFVSDFTAEPTLIRQIAHKNIQMIACGDNYSAAV 736



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 154/347 (44%), Gaps = 58/347 (16%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPK--LIDALNGSN-IHMVACGE 357
           +ACGS H + +T+  ++FSWG G  G LG G   D+  P+  +I+  + +  I  +ACG+
Sbjct: 294 VACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLIIEKKDYTYFIEGIACGK 353

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           +H+  +T    + TWG G    G LG   E    +P+++    +   I  I  G  H+AA
Sbjct: 354 YHSMCLTRKKKILTWGQG--QGGRLGHGDEDDVLVPKEIYDLSKKKPI-FISAGESHSAA 410

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           I+    L+T+G GT+G LGHG  +S   P+ +E L + + +  SCG +HT AI       
Sbjct: 411 ISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCGAFHTLAIT------ 464

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPR---------------VVPLCVKVSDDISFC 522
                     ++ +G G  G+LG    +                 V P  + V D     
Sbjct: 465 ------GQGTVYAFGQGKYGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQDKNEAI 518

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGS--------PGSTGKFPTRIEGNIKH---- 570
             A G++ ++ L  +G+++S G    G LG         P   G+ P  + G I +    
Sbjct: 519 LAAAGYNHSLCLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDEL 578

Query: 571 -------------RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
                          +  +ACG  +   +++  EVY +G  A GQL 
Sbjct: 579 IQRGDLKQEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLA 625



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 128/282 (45%), Gaps = 31/282 (10%)

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ--ISS 407
           I  VACG  H  A+T   +L++WG G    G LG  +    + PR +  + +     I  
Sbjct: 291 ITQVACGSAHILAITEDSELFSWGSG--QYGALGFGTRDDIFEPRHLIIEKKDYTYFIEG 348

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
           I CG +H+  +T   K+ T+G G  G LGHGD     VP+E+  L + K +  S G  H+
Sbjct: 349 IACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKKKPIFISAGESHS 408

Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
           AAI E               L+TWG G  G+LGHG       P  ++  D      V+CG
Sbjct: 409 AAISE------------KLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCG 456

Query: 528 HSITIALTATGQVFSMGSADYGQLG--SPGSTGKF--PTRI----------EGNIKHRYI 573
              T+A+T  G V++ G   YG+LG       G F  P +I          E  ++ +  
Sbjct: 457 AFHTLAITGQGTVYAFGQGKYGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQDKNE 516

Query: 574 EDIACGSYHIAVVSSKS-EVYTWGKGANGQLGHGDNENKQTP 614
             +A   Y+ ++  +KS ++Y+WG    G LG      +  P
Sbjct: 517 AILAAAGYNHSLCLAKSGKIYSWGYNGKGLLGRQKGFEEHLP 558



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 104/448 (23%), Positives = 194/448 (43%), Gaps = 78/448 (17%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +++ WG G   G LG   +G++ S         PK++E     +   ++CG+ H + +T 
Sbjct: 416 NLYTWGTGT-YGRLG---HGMDTSEKK------PKLIEDLDQYEIIHVSCGAFHTLAITG 465

Query: 314 QGQIFSWGEGSGGKLG------HGVEA---DVSY------PKLIDALNGSNIHMVACGEF 358
           QG ++++G+G  GKLG       GV +    +S+      P+ +   + +   + A G  
Sbjct: 466 QGTVYAFGQGKYGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQDKNEAILAAAGYN 525

Query: 359 HTCAVTLSGDLYTWG-DGIHNLG-------------------LLGQVSEISHWIPRKVSG 398
           H+  +  SG +Y+WG +G   LG                   L+G++  I   I R    
Sbjct: 526 HSLCLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQRGDLK 585

Query: 399 QMEGL--QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK 456
           Q E    ++  + CG  +T ++T+ G+++ FG   +G L      +T    + +      
Sbjct: 586 QEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQNNNN 645

Query: 457 TVMASCGVWHTAAIVEVAGKTS---------GSNGLS---SKKLFTWGDGAEGQLGHG-- 502
               +       ++++  G+T+         G +  +     +LF WG   EGQLG G  
Sbjct: 646 DNSQALDSSEQMSLIKFPGETTVRINYIACGGEHIFAISRMNELFGWGRNDEGQLGLGFV 705

Query: 503 ---DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK 559
               AEP ++      +  +    +ACG + + A++A G++F  G+ + G+LG   +  K
Sbjct: 706 SDFTAEPTLIRQIAHKNIQM----IACGDNYSAAVSAFGELFVTGNLENGKLGLGQALKK 761

Query: 560 -FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE--------VYTWGKGANGQLGHGDNEN 610
            F            I+ +ACG  H+  ++  +          Y+WG+   GQLG G  E+
Sbjct: 762 GFLLSFTLIQNLAPIKSVACGPNHMLAIADYNPDHPIKDGMCYSWGRNWKGQLGIGSKED 821

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
              P  +   +++  K V CG +F+  +
Sbjct: 822 SNVPKKIHNAKER-FKKVACGQDFSIGL 848



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 162/359 (45%), Gaps = 54/359 (15%)

Query: 291 ESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDALNGSN 349
           E+TV ++   IACG +H   +++  ++F WG    G+LG G  +D +  P LI  +   N
Sbjct: 665 ETTVRINY--IACGGEHIFAISRMNELFGWGRNDEGQLGLGFVSDFTAEPTLIRQIAHKN 722

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGL-LGQVSEISHWIPRKVSGQMEGLQISSI 408
           I M+ACG+ ++ AV+  G+L+  G+ + N  L LGQ  +    +   +   +    I S+
Sbjct: 723 IQMIACGDNYSAAVSAFGELFVTGN-LENGKLGLGQALKKGFLLSFTLIQNLA--PIKSV 779

Query: 409 CCGPWHTAAITSA--------GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
            CGP H  AI           G  +++G    G LG G +  ++VP+++   KE +    
Sbjct: 780 ACGPNHMLAIADYNPDHPIKDGMCYSWGRNWKGQLGIGSKEDSNVPKKIHNAKE-RFKKV 838

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGA---EGQLGHGDAEPRVVPLCVKVSD 517
           +CG   +       G T G+      +++ WG+     + ++   D +   +P  ++  +
Sbjct: 839 ACGQDFSI------GLTYGN------QVYLWGNNKYFCDSKITK-DVD---IPQLLQALE 882

Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG----------STGKFPTRIEGN 567
                 +AC +     L   G++   GS    ++              +  KFP R    
Sbjct: 883 QAQIKDIACSYKFCSVLNDKGEILIWGSYLTDRIKQNQKKDKKSQNHLAITKFPMR---- 938

Query: 568 IKHRYI-EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQT---PTLVEALRD 622
            K  ++ E I+ G  H A VS K  +YTWG    G+LG  + E K     P LV+++ D
Sbjct: 939 -KFDFLMETISAGQNHSAAVSVKRSLYTWGHAEGGRLGLNEKEYKNAKIEPILVQSIHD 996



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 92/201 (45%), Gaps = 18/201 (8%)

Query: 443 TSVPREVETLKELKTV-MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH 501
            S P  ++  K  K +   +CG  H  AI E              +LF+WG G  G LG 
Sbjct: 276 VSRPTAIKFPKHTKPITQVACGSAHILAITE------------DSELFSWGSGQYGALGF 323

Query: 502 GDAEPRVVP--LCVKVSDDISFCK-VACGHSITIALTATGQVFSMGSADYGQLGSPGSTG 558
           G  +    P  L ++  D   F + +ACG   ++ LT   ++ + G    G+LG      
Sbjct: 324 GTRDDIFEPRHLIIEKKDYTYFIEGIACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDD 383

Query: 559 KF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLV 617
              P  I    K + I  I+ G  H A +S K  +YTWG G  G+LGHG + +++ P L+
Sbjct: 384 VLVPKEIYDLSKKKPIF-ISAGESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLI 442

Query: 618 EALRDKQVKSVVCGSNFTAAI 638
           E L   ++  V CG+  T AI
Sbjct: 443 EDLDQYEIIHVSCGAFHTLAI 463



 Score = 46.6 bits (109), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 13/155 (8%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL- 345
           P ++      + Q IACG  ++  V+  G++F  G    GKLG G      +      + 
Sbjct: 712 PTLIRQIAHKNIQMIACGDNYSAAVSAFGELFVTGNLENGKLGLGQALKKGFLLSFTLIQ 771

Query: 346 NGSNIHMVACGEFHTCAV--------TLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
           N + I  VACG  H  A+           G  Y+WG      G LG  S+    +P+K+ 
Sbjct: 772 NLAPIKSVACGPNHMLAIADYNPDHPIKDGMCYSWGRNWK--GQLGIGSKEDSNVPKKIH 829

Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
              E  +   + CG   +  +T   +++ +G+  +
Sbjct: 830 NAKE--RFKKVACGQDFSIGLTYGNQVYLWGNNKY 862



 Score = 42.7 bits (99), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 29/144 (20%)

Query: 244 SCHEDFD-GL---GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQ 299
           +C +DF  GL     V++WG            N     S   +D  +P++L++      +
Sbjct: 839 ACGQDFSIGLTYGNQVYLWGN-----------NKYFCDSKITKDVDIPQLLQALEQAQIK 887

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD---------VSYP-KLIDALNGSN 349
            IAC  K   ++  +G+I  WG     ++    + D           +P +  D L    
Sbjct: 888 DIACSYKFCSVLNDKGEILIWGSYLTDRIKQNQKKDKKSQNHLAITKFPMRKFDFL---- 943

Query: 350 IHMVACGEFHTCAVTLSGDLYTWG 373
           +  ++ G+ H+ AV++   LYTWG
Sbjct: 944 METISAGQNHSAAVSVKRSLYTWG 967


>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
            [Polysphondylium pallidum PN500]
          Length = 1800

 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 175/355 (49%), Gaps = 24/355 (6%)

Query: 298  AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD--VSYPKLIDALNGSNIHMVAC 355
            A S+ACG +H  +++  G++F+WG  S G+LGHG+      S P+ ++    S I M++C
Sbjct: 1034 AVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMISC 1093

Query: 356  GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
            G  H+ AV  S  +Y+WG   +  G LG        +P+K+     G ++ +I  G  HT
Sbjct: 1094 GGEHSVAVDQSFQIYSWGSSRY--GQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHT 1151

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
              +  +G LFTFG    G LG G+  + +VP  +ET      ++   G   TA     AG
Sbjct: 1152 MVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIET----SEIVGIHGERITAI---AAG 1204

Query: 476  KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +     L +  +++WG  ++GQLGHG+ E  + P  +         K++CGH  T+A++
Sbjct: 1205 HSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAIS 1264

Query: 536  ATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVV------SS 588
                V+  G  ++  LG+  +  +  P  IE  I  + IE + CG YH A V      S 
Sbjct: 1265 ELNSVYCWGQGEHMCLGNGSNKNELSPKMIEFFINKK-IEKVVCGLYHTATVTAAENGSD 1323

Query: 589  KSEVYTWGKGANGQLGHGDNE-----NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            +  VY  G G +G+LG G +      +K  P ++ +L    +     GS F+A I
Sbjct: 1324 RGNVYICGGGEHGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSAII 1378



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 189/389 (48%), Gaps = 41/389 (10%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G++F WG     G LG  +N  +  S  RR   +     S +++    I+CG +H+V V 
Sbjct: 1051 GELFTWGNN-SQGQLGHGLNVGKYQSTPRR---VETFKSSPIIM----ISCGGEHSVAVD 1102

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLI-DALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            +  QI+SWG    G+LGHGV    + PK I D   G  +  +A G  HT  +  SGDL+T
Sbjct: 1103 QSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAHTMVLKKSGDLFT 1162

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQ----MEGLQISSICCGPWHTAAITSAGKLFTF 427
            +G   ++ G LG  +  +  +P ++       + G +I++I  G  H+      G ++++
Sbjct: 1163 FG--WNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAGHSHSIMCLDNGDIYSW 1220

Query: 428  GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
            G  + G LGHG+   +  P++++ LK    +  SCG +HT AI E+              
Sbjct: 1221 GANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAISEL------------NS 1268

Query: 488  LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT------GQVF 541
            ++ WG G    LG+G  +  + P  ++   +    KV CG   T  +TA       G V+
Sbjct: 1269 VYCWGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVY 1328

Query: 542  SMGSADYGQLGSPGS--TGKF----PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
              G  ++G+LG+ G   T  F    P  I  ++    I   + GS   A++++   +YTW
Sbjct: 1329 ICGGGEHGKLGTGGDLKTPFFDKPHPAVIP-SLNSMNIVGFSSGSEFSAIITNNGALYTW 1387

Query: 596  GKGANGQLGHGDNENKQTPTLVEALRDKQ 624
            G G  GQ+G+G  E+   PT + +L D++
Sbjct: 1388 GYGNFGQIGNGKTEDMWLPTKI-SLNDQR 1415



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 5/143 (3%)

Query: 503  DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-- 560
            D +  + P+   V ++     VACG      +++ G++F+ G+   GQLG   + GK+  
Sbjct: 1016 DPDLLLNPMPPLVKNEKKAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQS 1075

Query: 561  -PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             P R+E   K   I  I+CG  H   V    ++Y+WG    GQLGHG    +  P  +E 
Sbjct: 1076 TPRRVE-TFKSSPIIMISCGGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIED 1134

Query: 620  LRDKQVKSVVCGSNFTAAICLHK 642
                Q K +   + +   + L K
Sbjct: 1135 FTGGQ-KVLAIATGYAHTMVLKK 1156


>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC2-like [Xenopus (Silurana) tropicalis]
          Length = 4845

 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 194/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3963 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 4012

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 4013 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4072

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G ++  I  G  H+A IT+AG+L+T+G
Sbjct: 4073 VYSWGEA--EDGKLGHGNRSPCDRPRVIES-LRGTEVVDIAAGGAHSACITAAGELYTWG 4129

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGHGD      P+ VE L+  + +  +CG          +G            +
Sbjct: 4130 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG----------SGDAQTLCLTDDDTV 4179

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4180 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDY 4239

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4240 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4297

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K++  V CGS  T A
Sbjct: 4298 TTNAIQRPRLVAALQGKKINRVACGSAHTLA 4328



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 198/395 (50%), Gaps = 37/395 (9%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2965 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTAE 3014

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3015 GKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFS 3074

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AAITS+G+L+T+G G 
Sbjct: 3075 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 3131

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3132 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3180

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   +P  ++  +  + C++ CG   ++ALT +G V++     +  
Sbjct: 3181 WGDGDFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTWXXTKHCL 3240

Query: 551  LGSPGSTGKFPTRIEGNIKHRYI----EDIACGSYH----IAVVSSKSEVYTWGKGANGQ 602
                             +  R++        C +Y     I +V SK +VY WG   +GQ
Sbjct: 3241 AVXFYYXNYLLELFLIKVSVRFVLLGQYLXTCATYFKLNIIKIVISK-KVYAWGDNDHGQ 3299

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             G+G     + PTLV  L  +++  V CGS+ + A
Sbjct: 3300 QGNGTTTVNRKPTLVHGLEGQKITRVACGSSHSVA 3334



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 174/353 (49%), Gaps = 33/353 (9%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E+   L    +AC  K  +++++ G++++    +   LG         P+L+  L 
Sbjct: 442 PIQCEALANLGVTQVACAEKCFLILSRNGKLYTQAYNNN-TLG---------PQLVQGLA 491

Query: 347 GSNIHMVAC---GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQM 400
             NI  +A    G+ H  A++ + +L++WG G  + G LG    +S   P+ VS   G+ 
Sbjct: 492 SRNIVKIAAHPDGQ-HYLALSATSELFSWGCG--DGGRLGHGDTVSLEEPKLVSALSGKQ 548

Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
            G Q+  I CG  ++AAIT+ G+L+T+G G +G LGHG     +VP  V  LK LK V  
Sbjct: 549 TGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGLKVVDV 608

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
           SCG          +G     +   + ++++WGDG  G+LG G ++    P  ++   D+ 
Sbjct: 609 SCG----------SGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLD 658

Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS 580
             KV CG   +IA+T  GQV+S G  D  +LG          +I   ++ + + D+A GS
Sbjct: 659 IVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGS 718

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNEN--KQTPTLVEALRDKQVKSVVCG 631
            H   ++   EVY+W  G+N Q  H D     K  P+++  L  K +  + CG
Sbjct: 719 THCLALTESGEVYSW--GSNDQCQHFDTLRIAKPVPSVLPGLDSKHIVGISCG 769



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 162/332 (48%), Gaps = 40/332 (12%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++ SWG      LG    A+VS P   +AL    +  VAC E     ++ +G LYT    
Sbjct: 424 EVISWG-----LLGWKYYANVSGPIQCEALANLGVTQVACAEKCFLILSRNGKLYTQAYN 478

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
            + LG            P+ V G +    I  I   P   H  A+++  +LF++G G  G
Sbjct: 479 NNTLG------------PQLVQG-LASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGG 525

Query: 434 ALGHGDRSSTSVPREVETLKELKT----VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
            LGHGD  S   P+ V  L   +T    +  +CG  ++AAI             +  +L+
Sbjct: 526 RLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGSTYSAAIT------------ADGELY 573

Query: 490 TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSAD 547
           TWG G  G+LGHG +E + VP+ V     +    V+CG   + T+++T  GQV+S G  D
Sbjct: 574 TWGRGNYGRLGHGSSEDQTVPMLVTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGD 633

Query: 548 YGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
           YG+LG  GS G K P  IE  ++   I  + CGS     ++   +VY+WGKG N +LGHG
Sbjct: 634 YGKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHG 692

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             E+ + P ++  L+ K+V  V  GS    A+
Sbjct: 693 TEEHVRYPKIMNGLQGKKVVDVAVGSTHCLAL 724



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 155/333 (46%), Gaps = 19/333 (5%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G V+  GE   NG LG  ++   +    +  AL      S  V+   ++  G +HA  +T
Sbjct: 3015 GKVYACGEA-TNGRLGLGISSGTVPIPRQITAL------SNYVVKKVAVHSGGRHATALT 3067

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
              G++FSWGEG  GKLGH    +   P+LI+AL    I  +ACG  H+ A+T SG+LYTW
Sbjct: 3068 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 3127

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDG 430
            G G    G LG     +   P+ V   + G ++  + CG     T A+T  G +F++GDG
Sbjct: 3128 GLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3184

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             FG LG G     ++P+ +E L         CG   + A+ +     +         +  
Sbjct: 3185 DFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKSGVVWTWXXTKHCLAVXF 3244

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            +      +L       R V L   +    ++ K+       I +  + +V++ G  D+GQ
Sbjct: 3245 YYXNYLLELFLIKVSVRFVLLGQYLXTCATYFKLN-----IIKIVISKKVYAWGDNDHGQ 3299

Query: 551  LGSPGST-GKFPTRIEGNIKHRYIEDIACGSYH 582
             G+  +T  + PT + G ++ + I  +ACGS H
Sbjct: 3300 QGNGTTTVNRKPTLVHG-LEGQKITRVACGSSH 3331



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 149/314 (47%), Gaps = 32/314 (10%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++   G  +       ++F WG G G  L  G  + V +       AL  K     V+ 
Sbjct: 498 IAAHPDGQHYLALSATSELFSWGCGDGGRL--GHGDTVSLEEPKLVSALSGKQTGKQVI- 554

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T  G++++WG G+ G+LGHG   D + P L+  L G  +  V+C 
Sbjct: 555 ---HIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPMLVTGLKGLKVVDVSCG 611

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T +VT +G +++WGDG  + G LG+        P+ +  +++ L I  + CG   
Sbjct: 612 SGDAQTLSVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQF 668

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           + AIT  G+++++G G    LGHG       P+ +  L+  K V  + G  H  A+ E  
Sbjct: 669 SIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLALTE-- 726

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGD----AEPRVVPLCVKVSDDISFCKVACGHSI 530
                     S ++++WG   + Q  H D    A+P  VP  +   D      ++CG + 
Sbjct: 727 ----------SGEVYSWGSNDQCQ--HFDTLRIAKP--VPSVLPGLDSKHIVGISCGPAQ 772

Query: 531 TIALTATGQVFSMG 544
           + A ++  + +S+G
Sbjct: 773 SFAWSSCSE-WSIG 785



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 138/281 (49%), Gaps = 22/281 (7%)

Query: 364  TLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGK 423
            T+   ++ WG  +++   LG +      +P   S  +  L +  +  G     A+T+ GK
Sbjct: 2960 TIRTKVFVWG--LNDKDQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTAEGK 3016

Query: 424  LFTFGDGTFGALGHGDRSST-SVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGS 480
            ++  G+ T G LG G  S T  +PR++  L    +K V    G  H  A+  V GK    
Sbjct: 3017 VYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALT-VDGK---- 3071

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
                   +F+WG+G +G+LGH        P  ++         +ACG S + A+T++G++
Sbjct: 3072 -------VFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGEL 3124

Query: 541  FSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSE--VYTWGK 597
            ++ G  +YG+LG   +T +  P  ++  + HR I+ +ACGS     ++   E  V++WG 
Sbjct: 3125 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLVFSWGD 3183

Query: 598  GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G  G+LG G +E    P  +E L  + V  + CG+ F+ A+
Sbjct: 3184 GDFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLAL 3224



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 125/280 (44%), Gaps = 30/280 (10%)

Query: 376  IHNLGLLGQV---SEISHWIPRKVSGQME--------GLQISSICCGPWHTAAITSAGKL 424
            IH L L+GQ+    E    +P   S   E        G  +     G   TA I +  K+
Sbjct: 2908 IHELNLVGQIRAEDEDMATVPFLASDNDEEDDDKASTGSFVRKKTAGLESTATIRT--KV 2965

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
            F +G      LG    S   VP   ETL  L              +V+VAG +     ++
Sbjct: 2966 FVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAGGSKSLFAVT 3012

Query: 485  SK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSITIALTATGQV 540
            ++ K++  G+   G+LG G +   V +P  +    +    KVA   G     ALT  G+V
Sbjct: 3013 AEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKV 3072

Query: 541  FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
            FS G  D G+LG          R+   +K + I DIACGS H A ++S  E+YTWG G  
Sbjct: 3073 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEY 3132

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3133 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3172



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3964 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4019

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 4020 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4068

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++         +A G + +  +TA G++++
Sbjct: 4069 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYT 4127

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    +R I DIACGS       ++    V++WG G 
Sbjct: 4128 WGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI-DIACGSGDAQTLCLTDDDTVWSWGDGD 4186

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4187 YGKLGRGGSDGCKVPMKIDSLTGVGVTKVECGSQFSVAL 4225



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 111/222 (50%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3964 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 4011

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 4012 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4071

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + DIA G  H A +++  E+YTWGKG
Sbjct: 4072 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITAAGELYTWGKG 4131

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGHGD+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 4132 RYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 4173



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 24/231 (10%)

Query: 253  GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            G+++ WG G    LG+G              D    L PK+++  +      +ACGS+ A
Sbjct: 3122 GELYTWGLGEYGRLGHG--------------DNTTQLKPKMVKVLLGHRVIQVACGSRDA 3167

Query: 309  --VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
              + +T +G +FSWG+G  GKLG G     + P+ I+ LNG  +  + CG   + A+T S
Sbjct: 3168 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQAVCQIECGAQFSLALTKS 3227

Query: 367  GDLYTWGDGIHNLGL-LGQVSEISHWIPRKVSGQMEGLQISSICCGPW---HTAAITSAG 422
            G ++TW    H L +     + +      KVS +   L      C  +   +   I  + 
Sbjct: 3228 GVVWTWXXTKHCLAVXFYYXNYLLELFLIKVSVRFVLLGQYLXTCATYFKLNIIKIVISK 3287

Query: 423  KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
            K++ +GD   G  G+G  +    P  V  L+  K    +CG  H+ A   V
Sbjct: 3288 KVYAWGDNDHGQQGNGTTTVNRKPTLVHGLEGQKITRVACGSSHSVAWTTV 3338


>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Megachile rotundata]
          Length = 1135

 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 178/367 (48%), Gaps = 28/367 (7%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           ++F WG  + +G LG  + G+E       + L+P+ L+     + + IACG  + VL+T+
Sbjct: 77  NMFCWGSTI-HGELG--LGGIE-----DENILVPRELDFQKATEIEQIACGENYTVLITR 128

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            GQ++S G    G+LGH  E      +LI  L+      VACG  HT AV   G L++WG
Sbjct: 129 DGQVYSCGNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWG 186

Query: 374 DGIHNLGLLGQVSE-ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
                 G LG  S+ +   +P  V      + +  + CG  H  A+T+ GKL+++G  + 
Sbjct: 187 SNAE--GQLGLNSKNLIECVPHMVRALGTSV-VVQVACGINHVLALTNNGKLYSWGSNSD 243

Query: 433 GALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           G LG G D  +   P+ + +L  +     +CG +H+ AI +            S  +F W
Sbjct: 244 GQLGLGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAISK------------SGAVFGW 291

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           G    GQLG  D   R +P  ++   +   C  ACG   ++ LT  G VF+ G+  YGQL
Sbjct: 292 GKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQL 351

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           G   ++ +   R    +    +  I+CG  H + +V S+  VY WG G  GQLG+    +
Sbjct: 352 GHGNTSNEILPRQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGGAGQLGNNITRS 411

Query: 611 KQTPTLV 617
             TP +V
Sbjct: 412 VATPQVV 418



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 152/334 (45%), Gaps = 27/334 (8%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +F WG    G+LG G   + ++  P+ +D    + I  +ACGE +T  +T  G +Y+ G+
Sbjct: 78  MFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDGQVYSCGN 137

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQ---ISSICCGPWHTAAITSAGKLFTFGDGT 431
             ++ G LG      H   RK    + GL       + CG  HT A+   G+LF++G   
Sbjct: 138 --NDYGQLG------HEKGRKRLQLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNA 189

Query: 432 FGALGHGDRSSTS-VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            G LG   ++    VP  V  L     V  +CG+ H  A+         +NG    KL++
Sbjct: 190 EGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVLALT--------NNG----KLYS 237

Query: 491 WGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
           WG  ++GQLG G D +  + P  +     +    + CG   ++A++ +G VF  G   +G
Sbjct: 238 WGSNSDGQLGLGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWGKNTFG 297

Query: 550 QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           QLG   +  +   R    +++  +   ACG      ++    V+T G G  GQLGHG+  
Sbjct: 298 QLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGNTS 357

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
           N+  P  V  L    V  + CG   T  +   +G
Sbjct: 358 NEILPRQVMELMGSTVTQISCGKRHTLGLVPSRG 391



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 133/288 (46%), Gaps = 35/288 (12%)

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           +++ WG  IH    LG + + +  +PR++  Q +  +I  I CG  +T  IT  G++++ 
Sbjct: 77  NMFCWGSTIHGELGLGGIEDENILVPRELDFQ-KATEIEQIACGENYTVLITRDGQVYSC 135

Query: 428 GDGTFGALGH--GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
           G+  +G LGH  G +    +P     L        +CG  HT A+ E             
Sbjct: 136 GNNDYGQLGHEKGRKRLQLIP----GLDAFVFKKVACGAHHTLAVNEWG----------- 180

Query: 486 KKLFTWGDGAEGQLGHGDAE-PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            +LF+WG  AEGQLG         VP  V+        +VACG +  +ALT  G+++S G
Sbjct: 181 -QLFSWGSNAEGQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWG 239

Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIA--------CGSYHIAVVSSKSEVYTWG 596
           S   GQLG         T ++  IK + I  +A        CG YH   +S    V+ WG
Sbjct: 240 SNSDGQLG-------LGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAISKSGAVFGWG 292

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           K   GQLG  D  N+  P  ++ L++ +V    CG  F+  + +  GV
Sbjct: 293 KNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGV 340



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 81/159 (50%), Gaps = 5/159 (3%)

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPR--VVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
           ++ K +F WG    G+LG G  E    +VP  +         ++ACG + T+ +T  GQV
Sbjct: 73  VTDKNMFCWGSTIHGELGLGGIEDENILVPRELDFQKATEIEQIACGENYTVLITRDGQV 132

Query: 541 FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
           +S G+ DYGQLG     G+   ++   +     + +ACG++H   V+   ++++WG  A 
Sbjct: 133 YSCGNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKVACGAHHTLAVNEWGQLFSWGSNAE 190

Query: 601 GQLG-HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           GQLG +  N  +  P +V AL    V  V CG N   A+
Sbjct: 191 GQLGLNSKNLIECVPHMVRALGTSVVVQVACGINHVLAL 229



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 117/245 (47%), Gaps = 28/245 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G ++ WG    +G LG           D ++ + PK++ S   +    I CG  H++ ++
Sbjct: 233 GKLYSWGSN-SDGQLG--------LGTDVKNEIKPKLISSLAGVPIAFITCGGYHSMAIS 283

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K G +F WG+ + G+LG     + + P+ +  L  + +   ACGE  +  +T+ G ++T 
Sbjct: 284 KSGAVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTC 343

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGT 431
           G G++  G LG  +  +  +PR+V  ++ G  ++ I CG  HT  +  S G+++ +G G 
Sbjct: 344 GAGMY--GQLGHGNTSNEILPRQVM-ELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGG 400

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVW---HTAAIVEVAGKTSGSNGLSSKKL 488
            G LG+    S + P+ V             G W   + +++++    TS       K +
Sbjct: 401 AGQLGNNITRSVATPQVVH------------GPWVAPNGSSVIDFNEFTSCKTNYIVKHI 448

Query: 489 FTWGD 493
           FT GD
Sbjct: 449 FTGGD 453


>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 1289

 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 176/383 (45%), Gaps = 50/383 (13%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS------------------YPKLI 342
           +ACG +H + +T  G ++S+G+    K+     A  +                   P L+
Sbjct: 482 VACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDNESTRVVSTSSFLAPHLV 541

Query: 343 D------ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV 396
           +      AL+ + I MVACG  H+ A+T +G+LYTWG G    G LG        +PRKV
Sbjct: 542 EELALEKALHRTTIAMVACGAQHSLAITDAGELYTWGSG--EDGRLGHGDMRDRAVPRKV 599

Query: 397 SGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK 456
              +    + S  CG  HTA +T+ G +FTFG G  G LG GD      P  +    +  
Sbjct: 600 MSLLRE-SVVSASCGGAHTAVLTAKGSVFTFGRGRNGRLGLGDNKWRDTPHPIVGFPQGT 658

Query: 457 TV-MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE-PRVVPLCVK 514
           ++ +  CG W+  A ++  G            +FTWG   EGQ G G  +  +VVP CV 
Sbjct: 659 SISLVVCG-WNFTAALDRQG-----------SVFTWGKTGEGQCGLGYVDRDQVVPRCVD 706

Query: 515 VSDDI---SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHR 571
              D+   S   VACG++ T+ LTA+G+++S G  +YGQLG+       P R++      
Sbjct: 707 KLRDVAGSSVVDVACGYTHTVVLTASGELYSWGLGEYGQLGTGDVYQPLPARVQLPADAL 766

Query: 572 YIED----IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKS 627
              D    + CG++H    + +  ++ WG  + G  G G   NK  P  ++    +    
Sbjct: 767 CAPDQLARVYCGAFHSIATTEQRVMFAWGLNSYGACGLGHTANKDKPERIDCFSSQTELV 826

Query: 628 VVCGSNFTAAICLHKGVSIADHS 650
           V CG  +T  I L    S+  HS
Sbjct: 827 VACGHKYT--IALEVNASLYTHS 847



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 153/320 (47%), Gaps = 31/320 (9%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
           L K L  T +     +ACG++H++ +T  G++++WG G  G+LGHG   D + P+ + +L
Sbjct: 546 LEKALHRTTI---AMVACGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMSL 602

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
              ++   +CG  HT  +T  G ++T+G G +  G LG         P  + G  +G  I
Sbjct: 603 LRESVVSASCGGAHTAVLTAKGSVFTFGRGRN--GRLGLGDNKWRDTPHPIVGFPQGTSI 660

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFG--ALGHGDRSSTSVPREVETLKEL---KTVMA 460
           S + CG   TAA+   G +FT+G    G   LG+ DR    VPR V+ L+++     V  
Sbjct: 661 SLVVCGWNFTAALDRQGSVFTWGKTGEGQCGLGYVDRDQV-VPRCVDKLRDVAGSSVVDV 719

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI- 519
           +CG  HT  +             +S +L++WG G  GQLG GD   + +P  V++  D  
Sbjct: 720 ACGYTHTVVLT------------ASGELYSWGLGEYGQLGTGDVY-QPLPARVQLPADAL 766

Query: 520 ----SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIE 574
                  +V CG   +IA T    +F+ G   YG  G   +  K  P RI+       + 
Sbjct: 767 CAPDQLARVYCGAFHSIATTEQRVMFAWGLNSYGACGLGHTANKDKPERIDCFSSQTELV 826

Query: 575 DIACGSYHIAVVSSKSEVYT 594
            +ACG  +   +   + +YT
Sbjct: 827 -VACGHKYTIALEVNASLYT 845



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 134/299 (44%), Gaps = 34/299 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+++ WG G  +G LG           D RD  +P+ + S +     S +CG  H  ++T
Sbjct: 572 GELYTWGSG-EDGRLG---------HGDMRDRAVPRKVMSLLRESVVSASCGGAHTAVLT 621

Query: 313 KQGQIFSWGEGSGGKLGHGVEA--DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
            +G +F++G G  G+LG G     D  +P ++    G++I +V CG   T A+   G ++
Sbjct: 622 AKGSVFTFGRGRNGRLGLGDNKWRDTPHP-IVGFPQGTSISLVVCGWNFTAALDRQGSVF 680

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSG--QMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           TWG        LG V      +PR V     + G  +  + CG  HT  +T++G+L+++G
Sbjct: 681 TWGKTGEGQCGLGYVDR-DQVVPRCVDKLRDVAGSSVVDVACGYTHTVVLTASGELYSWG 739

Query: 429 DGTFGALGHGDRSSTSVPREVETLKEL-----KTVMASCGVWHTAAIVEVAGKTSGSNGL 483
            G +G LG GD     +P  V+   +      +     CG +H+ A  E           
Sbjct: 740 LGEYGQLGTGD-VYQPLPARVQLPADALCAPDQLARVYCGAFHSIATTE----------- 787

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             + +F WG  + G  G G    +  P  +      +   VACGH  TIAL     +++
Sbjct: 788 -QRVMFAWGLNSYGACGLGHTANKDKPERIDCFSSQTELVVACGHKYTIALEVNASLYT 845



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 116/275 (42%), Gaps = 42/275 (15%)

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD------GTFGALGHG----DRSS 442
           P+ VS    G  I  + CG  H   +TS G ++++GD             H     D  S
Sbjct: 468 PKHVS-LANGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDNES 526

Query: 443 TSV--------PREVETLKELKTV------MASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           T V        P  VE L   K +      M +CG  H+ AI +            + +L
Sbjct: 527 TRVVSTSSFLAPHLVEELALEKALHRTTIAMVACGAQHSLAITD------------AGEL 574

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           +TWG G +G+LGHGD   R VP  V      S    +CG + T  LTA G VF+ G    
Sbjct: 575 YTWGSGEDGRLGHGDMRDRAVPRKVMSLLRESVVSASCGGAHTAVLTAKGSVFTFGRGRN 634

Query: 549 GQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
           G+LG   +  +  P  I G  +   I  + CG    A +  +  V+TWGK   GQ G G 
Sbjct: 635 GRLGLGDNKWRDTPHPIVGFPQGTSISLVVCGWNFTAALDRQGSVFTWGKTGEGQCGLGY 694

Query: 608 NENKQ-TPTLVEALRDKQVKSVV---CGSNFTAAI 638
            +  Q  P  V+ LRD    SVV   CG   T  +
Sbjct: 695 VDRDQVVPRCVDKLRDVAGSSVVDVACGYTHTVVL 729


>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
            anatinus]
          Length = 3053

 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 207/416 (49%), Gaps = 58/416 (13%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 1151 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 1200

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 1201 GKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFS 1260

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AAITS+G+L+T+G G 
Sbjct: 1261 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAAITSSGELYTWGLGE 1317

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 1318 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 1366

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            WGDG  G+LG G +E   VP  ++  +    C++ CG   ++ALT +G V++ G  D+G+
Sbjct: 1367 WGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGE 1426

Query: 551  LGSPGS----TGKFPTRIE--------------GNIKHRYIEDIACGSYHIAVVSS---- 588
            L  P S    +G    R+               G +  R +     G    + +SS    
Sbjct: 1427 L-RPDSHIVQSGNVSDRMRVRNKGACLIPLPFFGLVSPREMGWEIVGIERNSGISSFCGQ 1485

Query: 589  -------KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                   + EVY WG   +GQ G+G     + PTLV+ L  +++  V CGS+ + A
Sbjct: 1486 QGERRERQLEVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 1541



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 2169 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 2218

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    +  VA   G  H  A++  G+
Sbjct: 2219 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGE 2278

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR V   + G+++  I  G  H+A IT AG L+++G
Sbjct: 2279 VYSWGEA--EDGKLGHGNRSPCDRPRVVE-SLRGIEVVDIAAGGAHSACITVAGDLYSWG 2335

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGHGD      P+ VE L+  + +  +CG          +G            +
Sbjct: 2336 KGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACG----------SGDAQTLCLTDDDTV 2385

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 2386 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 2445

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 2446 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 2503

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K++  V CGS  T A
Sbjct: 2504 TTNAIQRPRLVAALQGKKINRVACGSAHTLA 2534



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 173/355 (48%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G+++               +D   P+L+  L 
Sbjct: 147 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYV----------QAYNSDTLGPQLVQGLA 196

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  VA      H  A+  +G++++WG G  + G LG    +    P+ +S   G+  
Sbjct: 197 SRNIVKVAAHSDGHHYLALAATGEVFSWGCG--DGGRLGHGDTVPLEEPKMISALSGKQA 254

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  S
Sbjct: 255 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 314

Query: 462 CGVW--HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 315 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 362

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 363 DIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVVDVAA 421

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P+ +  L  K +  + CG
Sbjct: 422 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRITKPQPSALPGLDTKHIVGIACG 474



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 161/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG     A   D L P++++     +   +A  S   H + +   G++FSWG G GG+LG
Sbjct: 174 NGRVYVQAYNSDTLGPQLVQGLASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLG 233

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I AL+G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 234 HGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 291

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPW--HTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 292 SSEDQTIPMLVTG-LKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 350

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 351 KTPKLIEKLQDLDIVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 398

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P+
Sbjct: 399 EEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPQPS 458

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 459 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 486



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 177/379 (46%), Gaps = 42/379 (11%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 1146 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 1205

Query: 372  WGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
             G+  +    LG          Q++ +S+++ +KV          ++  G  H  A+T  
Sbjct: 1206 CGEATNGRLGLGISSGTVPLPRQITALSNYVVKKV----------AVHSGGRHAMALTVD 1255

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            GK+F++G+G  G LGH  R +   PR +E LK  +    +CG  H+AAI           
Sbjct: 1256 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAIT---------- 1305

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
              SS +L+TWG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G 
Sbjct: 1306 --SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 1363

Query: 540  VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            VFS G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWG+G
Sbjct: 1364 VFSWGDGDFGKLGRGGSEGCNVPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGRG 1422

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG----VSIADHS-ICS 653
              G+L   D+   Q+  + + +R +   + +    F   +   +     V I  +S I S
Sbjct: 1423 DFGEL-RPDSHIVQSGNVSDRMRVRNKGACLIPLPFFGLVSPREMGWEIVGIERNSGISS 1481

Query: 654  GCRNQFNFRRRRHNCYNCG 672
             C  Q   R R+   Y  G
Sbjct: 1482 FCGQQGERRERQLEVYAWG 1500



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 164/329 (49%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +Y     
Sbjct: 129 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYVQA-- 181

Query: 376 IHNLGLLGQ--VSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
            +N   LG   V  ++     KV+   +G           H  A+ + G++F++G G  G
Sbjct: 182 -YNSDTLGPQLVQGLASRNIVKVAAHSDG----------HHYLALAATGEVFSWGCGDGG 230

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 231 RLGHGD----TVP-----LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 281

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E + +P+ V     +    V+CG   + T+A+T  GQV+S G  DYG+
Sbjct: 282 RGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGK 341

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   I  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 342 LGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 400

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 401 HVRYPKLLEGLQGKKVVDVAAGSTHCLAL 429



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 168/362 (46%), Gaps = 56/362 (15%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G V+  GE   NG LG  ++   +    +  AL      S  V+   ++  G +HA+ +T
Sbjct: 1201 GKVYACGEAT-NGRLGLGISSGTVPLPRQITAL------SNYVVKKVAVHSGGRHAMALT 1253

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
              G++FSWGEG  GKLGH    +   P+LI+AL    I  +ACG  H+ A+T SG+LYTW
Sbjct: 1254 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTW 1313

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDG 430
            G G    G LG     +   P+ V   + G ++  + CG     T A+T  G +F++GDG
Sbjct: 1314 GLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 1370

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             FG LG G     +VP+ +E L         CG   + A+ +            S  ++T
Sbjct: 1371 DFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 1418

Query: 491  WGDGAEGQL---------GHGDAEPRV---------VPLCVKVSD-DISFCKVACGHSIT 531
            WG G  G+L         G+     RV         +P    VS  ++ +  V    +  
Sbjct: 1419 WGRGDFGELRPDSHIVQSGNVSDRMRVRNKGACLIPLPFFGLVSPREMGWEIVGIERNSG 1478

Query: 532  IALTATGQ----------VFSMGSADYGQLGSPGST-GKFPTRIEGNIKHRYIEDIACGS 580
            I+ +  GQ          V++ G  D+GQ G+  +T  + PT ++G ++ + I  +ACGS
Sbjct: 1479 IS-SFCGQQGERRERQLEVYAWGDNDHGQQGNGTTTVNRKPTLVQG-LEGQKITRVACGS 1536

Query: 581  YH 582
             H
Sbjct: 1537 SH 1538



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 121/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           V++ S G  +      G+VF WG G G  L  G  + V +       AL  K     VV 
Sbjct: 203 VAAHSDGHHYLALAATGEVFSWGCGDGGRL--GHGDTVPLEEPKMISALSGKQAGKHVV- 259

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  V+C 
Sbjct: 260 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVSCG 316

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L I  + CG   
Sbjct: 317 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDIVKVRCGSQF 373

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K V  + G  H  A+ E
Sbjct: 374 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTE 431



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 138/283 (48%), Gaps = 22/283 (7%)

Query: 362  AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            A T+   ++ WG  +++   LG +      +P   S  +  L +  +  G     A+T  
Sbjct: 1144 AATIRTKVFVWG--LNDKDQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 1200

Query: 422  GKLFTFGDGTFGALGHGDRSST-SVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTS 478
            GK++  G+ T G LG G  S T  +PR++  L    +K V    G  H  A+  V GK  
Sbjct: 1201 GKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALT-VDGK-- 1257

Query: 479  GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
                     +F+WG+G +G+LGH        P  ++         +ACG S + A+T++G
Sbjct: 1258 ---------VFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSG 1308

Query: 539  QVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSE--VYTW 595
            ++++ G  +YG+LG   +T +  P  ++  + HR I+ +ACGS     ++   E  V++W
Sbjct: 1309 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLVFSW 1367

Query: 596  GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G G  G+LG G +E    P  +E L  + V  + CG+ F+ A+
Sbjct: 1368 GDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLAL 1410



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 108/229 (47%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 1143 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 1189

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +    +    KVA   G    
Sbjct: 1190 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGRHA 1249

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            +ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 1250 MALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGE 1309

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 1310 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 1358



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 131/279 (46%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 2170 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 2225

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKEL--KTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++ +  K V  + G  H  A+            
Sbjct: 2226 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALS----------- 2274

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  V+    I    +A G + +  +T  G ++S
Sbjct: 2275 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACITVAGDLYS 2333

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    +R I DIACGS       ++    V++WG G 
Sbjct: 2334 WGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI-DIACGSGDAQTLCLTDDDTVWSWGDGD 2392

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 2393 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 2431



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 329 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDIVKVRCGSQFSIALT 378

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 379 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLALTEDSEVHSW 438

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     I+   P  + G ++   I  I CGP  + A +S
Sbjct: 439 GSNDQCQHFDTL----RITKPQPSALPG-LDTKHIVGIACGPAQSFAWSS 483



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 111/228 (48%), Gaps = 14/228 (6%)

Query: 415  TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            T +   +G ++ +G    G LG  + +   VP   E L  L+ V    G     A+    
Sbjct: 2164 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--- 2220

Query: 475  GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITI 532
                     +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +
Sbjct: 2221 ---------ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCL 2271

Query: 533  ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
            AL++ G+V+S G A+ G+LG    +     R+  +++   + DIA G  H A ++   ++
Sbjct: 2272 ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACITVAGDL 2331

Query: 593  YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            Y+WGKG  G+LGHGD+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 2332 YSWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVIDIACGSGDAQTLCL 2379



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 23/182 (12%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           G+++ WG G    LG+G           SS D+   +L   L+   V+D   ++CGS  A
Sbjct: 275 GELYTWGRGNYGRLGHG-----------SSEDQTIPMLVTGLKGLKVID---VSCGSGDA 320

Query: 309 --VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
             + VT+ GQ++SWG+G  GKLG G       PKLI+ L   +I  V CG   + A+T  
Sbjct: 321 QTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKD 380

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
           G +Y+WG G +    LG  +E     P+ + G ++G ++  +  G  H  A+T   ++ +
Sbjct: 381 GQVYSWGKGDNQ--RLGHGTEEHVRYPKLLEG-LQGKKVVDVAAGSTHCLALTEDSEVHS 437

Query: 427 FG 428
           +G
Sbjct: 438 WG 439



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 10/114 (8%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G V+ WG+G  + L  G+ + V      RR    P+ ++        +IA GS H V  T
Sbjct: 2435 GAVYTWGKGDYHRLGHGSDDHV------RR----PRQVQGLQGKKVIAIATGSLHCVCCT 2484

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
            + G++++WG+   G+LG G    +  P+L+ AL G  I+ VACG  HT A + S
Sbjct: 2485 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTS 2538



 Score = 40.4 bits (93), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 28/52 (53%)

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVT 364
            +Q ++++WG+   G+ G+G       P L+  L G  I  VACG  H+ A T
Sbjct: 1492 RQLEVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 1543


>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
          Length = 658

 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 173/378 (45%), Gaps = 36/378 (9%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+ + S   L  + I CGS H + +   G+I SWG G  G+LGH   +  S P +ID L 
Sbjct: 100 PQEVVSLAGLSIKLITCGSDHVLALDASGKIRSWGRGESGQLGHASFSHSSTPSIIDELA 159

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
              +  VACG   + A+   G LYTW  G +  G LGQ    S  IPR +   M    + 
Sbjct: 160 SQRVKEVACGVAFSAALMEGGQLYTW--GCNRYGQLGQGDRTSSAIPRMLP-SMNHRHVH 216

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-PREVETLKELKTVMASCGVW 465
            + CG  H   +T++  ++T+G+ ++G LGHG R    + P+ V  +  L       G  
Sbjct: 217 LMACGAAHIVVLTTSRDVYTWGNNSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVAGEN 276

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK-V 524
           H+  +                 ++TWG G  GQLGHGD E + +P  +   D  +    +
Sbjct: 277 HSCVMTSFG------------DIYTWGRGDFGQLGHGDMESKDIPTLLSPLDPKTQASLI 324

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSP-----GSTGKFPTRI---------EGNIKH 570
             G    +A+T +G V+S G   +GQLG         + +FP+ +           + +H
Sbjct: 325 VSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEH 384

Query: 571 RYI--EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQV 625
             I    I+CGS+H+ A+   K  ++ WG+G +GQLG    D   +  P  V+ ++   V
Sbjct: 385 DAISLSSISCGSHHVLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGMIV 444

Query: 626 KSVVCGSNFTAAICLHKG 643
            +  C  N +  +    G
Sbjct: 445 LAAACSENHSVVVATMPG 462



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 134/481 (27%), Positives = 213/481 (44%), Gaps = 63/481 (13%)

Query: 177 PQNRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFR----IS 232
           P  R  +   E LS     +A  R E     L+  A  G    + R ST +S R    +S
Sbjct: 50  PSGRSKQDLKEALSMNIFQRA--RTEIAKSKLHLTA--GATRIHGRFSTYNSQRPQEVVS 105

Query: 233 LSS-AVSSSSQGSCHE-DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVL 290
           L+  ++   + GS H    D  G +  WG G  +G LG          A    +  P ++
Sbjct: 106 LAGLSIKLITCGSDHVLALDASGKIRSWGRG-ESGQLG---------HASFSHSSTPSII 155

Query: 291 ESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNI 350
           +       + +ACG   +  + + GQ+++WG    G+LG G     + P+++ ++N  ++
Sbjct: 156 DELASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRMLPSMNHRHV 215

Query: 351 HMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC 410
           H++ACG  H   +T S D+YTWG+  ++ G LG      H +  K    M GL I  I  
Sbjct: 216 HLMACGAAHIVVLTTSRDVYTWGN--NSYGQLGHGFRKKHCLQPKSVRVMSGLDIKQIVA 273

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
           G  H+  +TS G ++T+G G FG LGHGD  S  +P  +  L              T A 
Sbjct: 274 GENHSCVMTSFGDIYTWGRGDFGQLGHGDMESKDIPTLLSPLDP-----------KTQAS 322

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD--------------AEPRVVPLCV--K 514
           + V+G         S  +++WG    GQLGHG                 P+++      +
Sbjct: 323 LIVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISPKIISFFAASE 382

Query: 515 VSDDISFCKVACGHSITIALTATGQ-VFSMGSADYGQLG-SPGSTGKFPTRIE-GNIKHR 571
             D IS   ++CG    +A+T     +F+ G  ++GQLG  P  T   P   E   +K  
Sbjct: 383 EHDAISLSSISCGSHHVLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRPIPQEVKKMKGM 442

Query: 572 YIEDIACGSYHIAVVSSKS--------EVYTWGKGANGQLGHGDNENKQTPTLVEALRDK 623
            +   AC   H  VV++          +V++WG+G+ GQLG+G     + P + E ++D 
Sbjct: 443 IVLAAACSENHSVVVATMPGSGPKGDMKVFSWGRGSFGQLGYGSG---KVPVMKETVQDN 499

Query: 624 Q 624
           Q
Sbjct: 500 Q 500


>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Callithrix jacchus]
          Length = 979

 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    Q + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Callithrix jacchus]
          Length = 1057

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    Q + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
           jacchus]
          Length = 1049

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    Q + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           impatiens]
          Length = 1088

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 178/368 (48%), Gaps = 28/368 (7%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           GD+F WG    +G LG  + G+E         L+P  ++     + Q IACG  + V++T
Sbjct: 31  GDMFCWGNT-RHGELG--LGGIE-----DEIILVPCQVDFKKASEIQQIACGENYTVVIT 82

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G+I+S G    G+LGH  E      +LI  L+      VACG +HT AV   G L++W
Sbjct: 83  HDGKIYSCGNNDYGQLGH--ERGRKRLQLILGLDAFVFKKVACGAYHTIAVNEWGQLFSW 140

Query: 373 GDGIHNLGLLGQVSE-ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           G   ++ G LG  S+      PR V      + I  + CG  H  A+T+ G+L+++G  +
Sbjct: 141 GS--NSEGQLGLNSKNFMECSPRMVKTLGTSI-IVQVACGMKHALALTNNGELYSWGSNS 197

Query: 432 FGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            G LG G D  S   P+ + TL  +     +CG +H+ AI +            S  +F 
Sbjct: 198 EGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISK------------SGAIFG 245

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG    GQLG  D + R +P  ++   +   C  ACG   ++ LT  G VF+ G+  YGQ
Sbjct: 246 WGKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQ 305

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG   +  +   R    +    +  I+CG  H +A+V S+  VY WG G  GQLG+    
Sbjct: 306 LGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTR 365

Query: 610 NKQTPTLV 617
           +  TP +V
Sbjct: 366 SIPTPQVV 373



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 162/341 (47%), Gaps = 29/341 (8%)

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEAD--VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           + K+G +F WG    G+LG G   D  +  P  +D    S I  +ACGE +T  +T  G 
Sbjct: 27  LLKKGDMFCWGNTRHGELGLGGIEDEIILVPCQVDFKKASEIQQIACGENYTVVITHDGK 86

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ---ISSICCGPWHTAAITSAGKLF 425
           +Y+ G+  ++ G LG      H   RK    + GL       + CG +HT A+   G+LF
Sbjct: 87  IYSCGN--NDYGQLG------HERGRKRLQLILGLDAFVFKKVACGAYHTIAVNEWGQLF 138

Query: 426 TFGDGTFGALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           ++G  + G LG   ++     PR V+TL     V  +CG+ H  A+         +NG  
Sbjct: 139 SWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQVACGMKHALALT--------NNG-- 188

Query: 485 SKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
             +L++WG  +EGQLG G D    V P  +     +    +ACG   +IA++ +G +F  
Sbjct: 189 --ELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGW 246

Query: 544 GSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
           G   +GQLG   +  +  P +++  +++  I   ACG      ++    V+T G G  GQ
Sbjct: 247 GKNTFGQLGLNDTQNRNLPHQLQ-TLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQ 305

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
           LGHG N N+  P  V  L    V  + CG   T A+   +G
Sbjct: 306 LGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQG 346



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 136/292 (46%), Gaps = 41/292 (14%)

Query: 367 GDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
           GD++ WG+  H  LGL G   EI   +P +V  + +  +I  I CG  +T  IT  GK++
Sbjct: 31  GDMFCWGNTRHGELGLGGIEDEII-LVPCQVDFK-KASEIQQIACGENYTVVITHDGKIY 88

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
           + G+  +G LGH +R    + + +  L        +CG +HT A+ E             
Sbjct: 89  SCGNNDYGQLGH-ERGRKRL-QLILGLDAFVFKKVACGAYHTIAVNEWG----------- 135

Query: 486 KKLFTWGDGAEGQLG-----HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
            +LF+WG  +EGQLG       +  PR+V    K        +VACG    +ALT  G++
Sbjct: 136 -QLFSWGSNSEGQLGLNSKNFMECSPRMV----KTLGTSIIVQVACGMKHALALTNNGEL 190

Query: 541 FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIED--------IACGSYHIAVVSSKSEV 592
           +S GS   GQLG           I   +K + I          IACG YH   +S    +
Sbjct: 191 YSWGSNSEGQLG-------LGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISKSGAI 243

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           + WGK   GQLG  D +N+  P  ++ LR+ ++    CG  F+  + +  GV
Sbjct: 244 FGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGV 295



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 112/233 (48%), Gaps = 22/233 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+++ WG     G LG  V        D R  + PK++ +   +    IACG  H++ ++
Sbjct: 188 GELYSWGSN-SEGQLGLGV--------DIRSEVKPKLINTLAGVPIAFIACGGYHSIAIS 238

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K G IF WG+ + G+LG     + + P  +  L  + I   ACGE  +  +T+ G ++T 
Sbjct: 239 KSGAIFGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTC 298

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGT 431
           G G++  G LG  S  +  +PR+V  ++ G  ++ I CG  HT A+  S G+++ +G G 
Sbjct: 299 GAGMY--GQLGHGSNNNEILPRQVM-ELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGG 355

Query: 432 FGALGHGDRSSTSVPREVE---------TLKELKTVMASCGVWHTAAIVEVAG 475
            G LG+    S   P+ V          ++ +L    +SC V +    +   G
Sbjct: 356 AGQLGNNSTRSIPTPQVVHGPWVAPNGSSMMDLDKQFSSCTVGYVVKHIFTGG 408


>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
          Length = 1049

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 167/347 (48%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F++G   +G LG G D +  + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGIDCNKQASPQLIKSLT 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F+W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFSW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D   +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VFS G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFSWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+      +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCNKQASPQLIKSLTGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 102/198 (51%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S   +    +A G  H+ ++T 
Sbjct: 157 EVFSWGQN-KYGQLGLGIDCNKQAS--------PQLIKSLTGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           mellifera]
          Length = 1081

 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 177/367 (48%), Gaps = 28/367 (7%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           D+F WG  + +G LG  + G+E       + L+P+ L+     + Q IACG  + V++T+
Sbjct: 27  DMFCWGSTI-HGELG--LGGIE-----DENILIPRELDFKKAAEIQQIACGENYTVVITQ 78

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G+I+S G    G+LGH  E      +LI  L+       ACG +HT A+   G L++WG
Sbjct: 79  IGEIYSCGNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWG 136

Query: 374 DGIHNLGLLGQVSE-ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
                 G LG  S+      PR V      + +  I CG  H  A+T+ G+L+++G  + 
Sbjct: 137 SNTE--GQLGLNSKNFMESSPRMVKTLGTSV-VVQIACGMKHAFALTNNGELYSWGSNSE 193

Query: 433 GALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           G LG G  +   + P+ +     +     +CG +H+ AI +            S  +F W
Sbjct: 194 GQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISK------------SGAVFGW 241

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           G    GQLG  D + R +P  ++   +   C  ACG   ++ LT  G VF+ G+  YGQL
Sbjct: 242 GKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQL 301

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           G   ++ +   R    +    +  I+CG  H +A+V S+  VY WG G  GQLG+    +
Sbjct: 302 GHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRS 361

Query: 611 KQTPTLV 617
             TP +V
Sbjct: 362 VTTPQVV 368



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 164/339 (48%), Gaps = 29/339 (8%)

Query: 313 KQGQIFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           K+  +F WG    G+LG G   + ++  P+ +D    + I  +ACGE +T  +T  G++Y
Sbjct: 24  KKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIY 83

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ---ISSICCGPWHTAAITSAGKLFTF 427
           + G+  ++ G LG      H   RK    + GL         CG +HT AI   G+LF++
Sbjct: 84  SCGN--NDYGQLG------HEKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSW 135

Query: 428 GDGTFGALGHGDRSST-SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
           G  T G LG   ++   S PR V+TL     V  +CG+ H  A+         +NG    
Sbjct: 136 GSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALT--------NNG---- 183

Query: 487 KLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
           +L++WG  +EGQLG G D +  + P  +     I    +ACG   +IA++ +G VF  G 
Sbjct: 184 ELYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGK 243

Query: 546 ADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
             +GQLG   +  +  P +++  +++  I   ACG      ++    V+T G G  GQLG
Sbjct: 244 NTFGQLGLNDTQDRNLPCQLQ-TLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLG 302

Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
           HG N N+  P  V  L    V  + CG   T A+   +G
Sbjct: 303 HGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRG 341



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 137/287 (47%), Gaps = 33/287 (11%)

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           D++ WG  IH    LG + + +  IPR++  + +  +I  I CG  +T  IT  G++++ 
Sbjct: 27  DMFCWGSTIHGELGLGGIEDENILIPRELDFK-KAAEIQQIACGENYTVVITQIGEIYSC 85

Query: 428 GDGTFGALGH--GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
           G+  +G LGH  G +    +P     L       A+CG +HT AI E             
Sbjct: 86  GNNDYGQLGHEKGRKRLQLIP----GLDAFVFKKAACGAYHTLAINEWG----------- 130

Query: 486 KKLFTWGDGAEGQLG-----HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
            +LF+WG   EGQLG       ++ PR+V    K        ++ACG     ALT  G++
Sbjct: 131 -QLFSWGSNTEGQLGLNSKNFMESSPRMV----KTLGTSVVVQIACGMKHAFALTNNGEL 185

Query: 541 FSMGSADYGQLGSPGSTGKF---PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
           +S GS   GQLG  G+  K+   P  I   I    I  IACG YH   +S    V+ WGK
Sbjct: 186 YSWGSNSEGQLGL-GTDTKYEIKPKFISAFIGIP-IAFIACGGYHSIAISKSGAVFGWGK 243

Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
              GQLG  D +++  P  ++ L++ ++    CG  F+  + +  GV
Sbjct: 244 NTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGV 290



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 132/285 (46%), Gaps = 30/285 (10%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHE-DFDGLGDVFIWGEGLGNGLLGGAVNG 273
           GL+  N   S+    +   +S V   + G  H       G+++ WG     G LG     
Sbjct: 144 GLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSN-SEGQLG----- 197

Query: 274 VEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
                 D +  + PK + + + +    IACG  H++ ++K G +F WG+ + G+LG    
Sbjct: 198 ---LGTDTKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDT 254

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
            D + P  +  L  + I   ACGE  +  +T+ G ++T G G++  G LG  S  +  +P
Sbjct: 255 QDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMY--GQLGHGSNSNEILP 312

Query: 394 RKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
           R+V  ++ G  ++ I CG  HT A+  S G+++ +G G  G LG+    S + P+ V   
Sbjct: 313 RQVM-ELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVVH-- 369

Query: 453 KELKTVMASCGVW---HTAAIVEVAGK-TSGSNGLSSKKLFTWGD 493
                     G W   + + I++V  +  S + G   K +FT GD
Sbjct: 370 ----------GPWIAPNGSTIMDVNKQFNSRTIGYIVKHIFTGGD 404


>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
          Length = 1057

 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 166/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F++G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 156/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  SCG +H+ A+ +            + ++F+W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSK------------ASEVFSW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +V+CG+  ++AL+   +VFS G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFSWGQN-KYGQLGLGIDCKKQTS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Canis lupus familiaris]
          Length = 1054

 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 164/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++  G+ F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 153/328 (46%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +              + F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------EGEFFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+  G+ F  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+ F WG+    G LG  ++  + +S        P++++S + +    +A G  H+ ++T
Sbjct: 156 GEFFCWGQN-KYGQLGLGIDCKKQAS--------PQLIKSLLGIPFMQVAAGGAHSFVLT 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+
Sbjct: 207 LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G 
Sbjct: 267 GAG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGG 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G  S+   P  V+
Sbjct: 324 NGQLGTGSTSNRKSPFTVK 342


>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
 gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
          Length = 1909

 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 167/328 (50%), Gaps = 27/328 (8%)

Query: 317 IFSWGEGSGGKLGHGV---EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           + +WG  S  KLG  V   E     P+ +   N S+I  ++ G +++ A+T +GD+Y WG
Sbjct: 600 LMTWGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYSAALTENGDVYMWG 659

Query: 374 DG-IHN--LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            G + N  + +LG        +P K+    +   I  +  G +H+AA+ + G+L T+G G
Sbjct: 660 RGSVKNPPVPVLGIPQIEDQLLPIKLESLTD---IVVVSIGFYHSAAVRANGELLTWGVG 716

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             G LGHGD  +   P+ +++L         CG  HT  + +        NG    K++T
Sbjct: 717 EEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTK--------NG----KVYT 764

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG    GQLG GD      P+ V   +  +  ++A G +    LT + +V   G+     
Sbjct: 765 WGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVFGNG--AA 822

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           +G+  S    PT +  ++K+ +I+ + CG Y  A +S   +VYTWG G   +LGHG+N+ 
Sbjct: 823 MGA-ASIISIPTLVP-SLKYLHIDKLCCGHYSTAAISECGDVYTWGTGQ--ELGHGNNQT 878

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + TP LVEALR++ ++ + CG   TA +
Sbjct: 879 ESTPKLVEALRNQSIRQISCGGRHTAFL 906



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 180/372 (48%), Gaps = 32/372 (8%)

Query: 273 GVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK----- 327
           G +++S ++     P+ L +  V D  SI+ GS ++  +T+ G ++ WG GS        
Sbjct: 612 GFKVASKEQSQPT-PERLPNFNVSDICSISSGSYYSAALTENGDVYMWGRGSVKNPPVPV 670

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LG     D   P  +++L  ++I +V+ G +H+ AV  +G+L TWG G    G LG   +
Sbjct: 671 LGIPQIEDQLLPIKLESL--TDIVVVSIGFYHSAAVRANGELLTWGVGEE--GQLGH-GD 725

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPR 447
             + +  KV   +    I+ + CG  HT  +T  GK++T+G   +G LG GD +    P 
Sbjct: 726 TQNQVEPKVIQSLTSFWITQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPM 785

Query: 448 EVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR 507
            V  L++   +  + G  H A +             +SK++  +G+GA      G A   
Sbjct: 786 PVTALEKYNVLQIASGSTHCAVLT------------NSKEVLVFGNGA----AMGAASII 829

Query: 508 VVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN 567
            +P  V     +   K+ CGH  T A++  G V++ G+    +LG   +  +   ++   
Sbjct: 830 SIPTLVPSLKYLHIDKLCCGHYSTAAISECGDVYTWGTGQ--ELGHGNNQTESTPKLVEA 887

Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH-GDNENKQTPTLVEALRDKQVK 626
           ++++ I  I+CG  H A ++    ++T GK + GQLGH   ++NK  P  +E+L      
Sbjct: 888 LRNQSIRQISCGGRHTAFLTDSGRIFTSGKDSFGQLGHQAGDQNK--PKKIESLTKTTFI 945

Query: 627 SVVCGSNFTAAI 638
           SV CG N+  A+
Sbjct: 946 SVSCGENYNIAL 957



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 141/292 (48%), Gaps = 38/292 (13%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++  WG G   G LG           D ++ + PKV++S        + CG KH + +T
Sbjct: 708 GELLTWGVG-EEGQLG---------HGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLT 757

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K G++++WG    G+LG G       P  + AL   N+  +A G  H   +T S ++  +
Sbjct: 758 KNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSKEVLVF 817

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           G+G      +G  S IS  IP  V   ++ L I  +CCG + TAAI+  G ++T+G G  
Sbjct: 818 GNG----AAMGAASIIS--IPTLVPS-LKYLHIDKLCCGHYSTAAISECGDVYTWGTGQ- 869

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
             LGHG+  + S P+ VE L+       SCG  HTA + +            S ++FT G
Sbjct: 870 -ELGHGNNQTESTPKLVEALRNQSIRQISCGGRHTAFLTD------------SGRIFTSG 916

Query: 493 DGAEGQLGH--GDA-EPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             + GQLGH  GD  +P+ +    K +    F  V+CG +  IAL  T + F
Sbjct: 917 KDSFGQLGHQAGDQNKPKKIESLTKTT----FISVSCGENYNIALFDTTRSF 964



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 101/244 (41%), Gaps = 26/244 (10%)

Query: 414 HTAAI---TSAGKLFTFGDGTFGALGH---GDRSSTSVPREVETLKELKTVMASCGVWHT 467
           H +AI   TS G L T+G  +   LG        S   P  +           S G +++
Sbjct: 588 HRSAIHLDTSRG-LMTWGSASNCKLGFKVASKEQSQPTPERLPNFNVSDICSISSGSYYS 646

Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ-----LGHGDAEPRVVPLCVKVSDDISFC 522
           AA+ E        NG     ++ WG G+        LG    E +++P+ ++   DI   
Sbjct: 647 AALTE--------NG----DVYMWGRGSVKNPPVPVLGIPQIEDQLLPIKLESLTDIVVV 694

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
            +   HS   A+ A G++ + G  + GQLG   +  +   ++  ++   +I  + CG  H
Sbjct: 695 SIGFYHSA--AVRANGELLTWGVGEEGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKH 752

Query: 583 IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHK 642
              ++   +VYTWG    GQLG GD      P  V AL    V  +  GS   A +   K
Sbjct: 753 TICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQIASGSTHCAVLTNSK 812

Query: 643 GVSI 646
            V +
Sbjct: 813 EVLV 816


>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Ovis aries]
          Length = 979

 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  V    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQIAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F ++A G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ IA G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    IA G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIDCKKQAS--------PQLIKSLLGIPFMQIAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           3 [Ailuropoda melanoleuca]
          Length = 1054

 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 165/346 (47%), Gaps = 20/346 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIDCKKQAS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1049

 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Ovis aries]
          Length = 1057

 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  V    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQIAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F ++A G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ IA G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    IA G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIDCKKQAS--------PQLIKSLLGIPFMQIAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
           garnettii]
          Length = 1049

 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSLV 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGLDCKKQTSPQLIKSLVGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 101/202 (50%), Gaps = 21/202 (10%)

Query: 254 DVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAV 309
           +VF WG+     LG GL             D +    P++++S V +    +A G  H+ 
Sbjct: 157 EVFCWGQNKYGQLGLGL-------------DCKKQTSPQLIKSLVGIPFMQVAAGGAHSF 203

Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
           ++T  G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G +
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263

Query: 370 YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFG 428
           +T+G G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG
Sbjct: 264 FTFGAG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFG 320

Query: 429 DGTFGALGHGDRSSTSVPREVE 450
            G  G LG G  S+   P  V+
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342


>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
          Length = 1049

 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIDCKKQTS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 979

 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
          Length = 4191

 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 175/343 (51%), Gaps = 17/343 (4%)

Query: 298  AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG- 356
            A+ I CG     ++   G + + GEGS G+LG G   D+    +I +L G  I  +A   
Sbjct: 3359 ARKIICGQNCTFVIQSDGTVLACGEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSV 3418

Query: 357  --EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
              + H+ A+  SG++++WGDG  + G LG  +      PR++   ++  Q+  + CG  H
Sbjct: 3419 GSDGHSLALAESGEVFSWGDG--DFGKLGHGNPDRQRRPRQIEA-LQTEQVVQVACGFKH 3475

Query: 415  TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            +A +TS GKLFTFG+G FG LG G  ++  +P  V  L+  +    +CG+ HTA +    
Sbjct: 3476 SAVVTSDGKLFTFGNGDFGKLGLGSVANKKLPERVMALEGYRIGQVACGLNHTACV---- 3531

Query: 475  GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                 ++G++   ++T+G+G  G+LG G A  +++P  V+   ++   KV CG  +T+ L
Sbjct: 3532 ----STDGMT---VWTFGEGDYGKLGLGYATMKLLPQKVETVCNLGIKKVGCGTHLTLFL 3584

Query: 535  TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
            T  G+VF  G               F  +I  ++    IED+A G+ H+  +++  +V  
Sbjct: 3585 TKDGKVFVCGIDRMPWHSLFRERAVFKPQIMTSLSDYSIEDLAVGTEHVLFLTTCGKVLG 3644

Query: 595  WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            WG    GQLG       + P ++  L DK ++ +  G   +AA
Sbjct: 3645 WGMTGEGQLGLPHVSLVRHPEIITELSDKGIRQISTGRTHSAA 3687



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 189/387 (48%), Gaps = 32/387 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           DV++WG    + L  G          ++   L+P  ++S +    Q +  G      +  
Sbjct: 349 DVYVWGSNSSHQLAEG----------NQEKILMP--VKSKMFTQVQQVEAGQYCTFAIHW 396

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPK--LIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            G + + G+GS G+LG G  ++ S PK  L+D +    +      + HT A+  +G +Y+
Sbjct: 397 DGSVSACGKGSYGRLGLGESSNQSLPKRILLDCV-VKKLSSSKGSDGHTLALAETGVVYS 455

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WGDG  + G LG  +  +H  P +++G   G  I  I  G  H+AA+T  GKL+T+G+G 
Sbjct: 456 WGDG--DYGKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRHSAAVTDDGKLYTWGEGD 513

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGHGD ++  VP +V  L E+ +V  +CG  HT  +V   GKT          ++++
Sbjct: 514 HGRLGHGDSNARYVPTQVAGLAEVGSV--ACGSSHT-LVVSKDGKT----------VWSF 560

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           G G  G+LG G+      P  V+    ++  KV  G   ++ALT  G+V++ GS      
Sbjct: 561 GSGEHGKLGTGELGKVYRPQVVEALQGLTIQKVCAGTWFSMALTTAGEVYTWGSGAILGK 620

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
           GS  +    P  +E   ++R I DI+ G  H   ++ + EV+ WG  + GQ G G   + 
Sbjct: 621 GSADAIVNLPMYVEDLAQYR-IVDISAGDNHCLALTDEHEVFAWGTNSMGQCGQGHTCSP 679

Query: 612 QT-PTLVEALRDKQVKSVVCGSNFTAA 637
            T P  V  L    ++ +  G++ + A
Sbjct: 680 ITRPLKVIGLEGVSIRQISAGTSHSMA 706



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 139/302 (46%), Gaps = 20/302 (6%)

Query: 290  LESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN 349
            L+  V+ D  +      H++ + + G++FSWG+G  GKLGHG       P+ I+AL    
Sbjct: 3406 LQGFVITDLATSVGSDGHSLALAESGEVFSWGDGDFGKLGHGNPDRQRRPRQIEALQTEQ 3465

Query: 350  IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
            +  VACG  H+  VT  G L+T+G+G  + G LG  S  +  +P +V   +EG +I  + 
Sbjct: 3466 VVQVACGFKHSAVVTSDGKLFTFGNG--DFGKLGLGSVANKKLPERVMA-LEGYRIGQVA 3522

Query: 410  CGPWHTAAITSAGK-LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTA 468
            CG  HTA +++ G  ++TFG+G +G LG G  +   +P++VET+  L      CG  H  
Sbjct: 3523 CGLNHTACVSTDGMTVWTFGEGDYGKLGLGYATMKLLPQKVETVCNLGIKKVGCGT-HLT 3581

Query: 469  AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV--PLCVKVSDDISFCKVAC 526
              +   GK              +  G +    H     R V  P  +    D S   +A 
Sbjct: 3582 LFLTKDGK-------------VFVCGIDRMPWHSLFRERAVFKPQIMTSLSDYSIEDLAV 3628

Query: 527  GHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
            G    + LT  G+V   G    GQLG P  +      I   +  + I  I+ G  H A  
Sbjct: 3629 GTEHVLFLTTCGKVLGWGMTGEGQLGLPHVSLVRHPEIITELSDKGIRQISTGRTHSAAW 3688

Query: 587  SS 588
            S+
Sbjct: 3689 SA 3690



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 136/279 (48%), Gaps = 32/279 (11%)

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           D+Y WG    +    G   +I   +  K+  Q++ ++    C     T AI   G +   
Sbjct: 349 DVYVWGSNSSHQLAEGNQEKILMPVKSKMFTQVQQVEAGQYC-----TFAIHWDGSVSAC 403

Query: 428 GDGTFGALGHGDRSSTSVPREVE---TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           G G++G LG G+ S+ S+P+ +     +K+L +   S G  HT A+ E            
Sbjct: 404 GKGSYGRLGLGESSNQSLPKRILLDCVVKKLSSSKGSDG--HTLALAETG---------- 451

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVK---VSDDISFCKVACGHSITIALTATGQVF 541
              +++WGDG  G+LGHG+      P  +    +   I +      HS   A+T  G+++
Sbjct: 452 --VVYSWGDGDYGKLGHGNCATHKQPERITGPFLGKTIKYIHAGYRHSA--AVTDDGKLY 507

Query: 542 SMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSE-VYTWGKGA 599
           + G  D+G+LG   S  ++ PT++ G  +   +  +ACGS H  VVS   + V+++G G 
Sbjct: 508 TWGEGDHGRLGHGDSNARYVPTQVAGLAE---VGSVACGSSHTLVVSKDGKTVWSFGSGE 564

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +G+LG G+      P +VEAL+   ++ V  G+ F+ A+
Sbjct: 565 HGKLGTGELGKVYRPQVVEALQGLTIQKVCAGTWFSMAL 603



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 110/216 (50%), Gaps = 29/216 (13%)

Query: 430  GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
            G    LG+    S SVP +VE+    + ++  CG   T  I     ++ G+       + 
Sbjct: 3338 GQLAELGY----SASVPVQVESFSIARKII--CGQNCTFVI-----QSDGT-------VL 3379

Query: 490  TWGDGAEGQLGHGDAEPR-----VVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
              G+G+ G+LG G+++       +  L   V  D++    + GHS+  AL  +G+VFS G
Sbjct: 3380 ACGEGSYGRLGQGNSDDLHSLSVISSLQGFVITDLATSVGSDGHSL--ALAESGEVFSWG 3437

Query: 545  SADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
              D+G+LG  +P    + P +IE  ++   +  +ACG  H AVV+S  +++T+G G  G+
Sbjct: 3438 DGDFGKLGHGNPDRQRR-PRQIEA-LQTEQVVQVACGFKHSAVVTSDGKLFTFGNGDFGK 3495

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            LG G   NK+ P  V AL   ++  V CG N TA +
Sbjct: 3496 LGLGSVANKKLPERVMALEGYRIGQVACGLNHTACV 3531


>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Papio anubis]
          Length = 979

 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ +  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIIQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
           mulatta]
          Length = 1049

 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ +  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIIQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Canis lupus familiaris]
          Length = 1049

 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIDCKKQAS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Papio anubis]
          Length = 1049

 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ +  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIIQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Ailuropoda melanoleuca]
          Length = 1049

 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 165/346 (47%), Gaps = 20/346 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIDCKKQAS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 1057

 Score =  162 bits (411), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Ovis aries]
          Length = 1049

 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 165/346 (47%), Gaps = 20/346 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  V    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQIAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F ++A G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ IA G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    IA G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIDCKKQAS--------PQLIKSLLGIPFMQIAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
          Length = 1057

 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIDCKKQTS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
          Length = 1054

 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ +  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIIQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Nomascus leucogenys]
          Length = 979

 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLV 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  ++  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLVGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++L+S V +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
 gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
          Length = 1057

 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 165/346 (47%), Gaps = 20/346 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQIAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F ++A G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ IA G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    IA G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIDCKKQAS--------PQLIKSLLGIPFMQIAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
 gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
 gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
 gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
          Length = 1057

 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ +  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIIQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Papio anubis]
          Length = 1057

 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ +  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIIQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Ailuropoda melanoleuca]
 gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
          Length = 1057

 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIDCKKQAS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Nomascus leucogenys]
          Length = 1049

 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLV 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  ++  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLVGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++L+S V +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Canis lupus familiaris]
          Length = 1057

 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIDCKKQAS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           florea]
          Length = 1081

 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 176/367 (47%), Gaps = 28/367 (7%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           D+F WG  + +G LG  + G+E       + L+P+ L+     + Q IACG  + V++T+
Sbjct: 27  DMFCWGSTI-HGELG--LGGIE-----DENILIPRELDFKKAAEIQQIACGENYTVVITQ 78

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G+I+S G    G+LGH  E      +LI  L+       ACG +HT A+   G L++WG
Sbjct: 79  IGEIYSCGNNDYGQLGH--EKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSWG 136

Query: 374 DGIHNLGLLGQVSE-ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
                 G LG  S+      PR V      + +  I CG  H  A+T+ G+L+++G  + 
Sbjct: 137 SNTE--GQLGLNSKNFMESSPRMVKTLGTSV-VVQIACGMKHAFALTNNGELYSWGSNSE 193

Query: 433 GALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           G LG G      + P+ +     +     +CG +H+ AI +            S  +F W
Sbjct: 194 GQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISK------------SGAVFGW 241

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           G    GQLG  D + R +P  ++   +   C  ACG   ++ LT  G VF+ G+  YGQL
Sbjct: 242 GKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQL 301

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           G   ++ +   R    +    +  I+CG  H +A+V S+  VY WG G  GQLG+    +
Sbjct: 302 GHGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRS 361

Query: 611 KQTPTLV 617
             TP +V
Sbjct: 362 VTTPQVV 368



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 164/339 (48%), Gaps = 29/339 (8%)

Query: 313 KQGQIFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           K+  +F WG    G+LG G   + ++  P+ +D    + I  +ACGE +T  +T  G++Y
Sbjct: 24  KKKDMFCWGSTIHGELGLGGIEDENILIPRELDFKKAAEIQQIACGENYTVVITQIGEIY 83

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ---ISSICCGPWHTAAITSAGKLFTF 427
           + G+  ++ G LG      H   RK    + GL         CG +HT AI   G+LF++
Sbjct: 84  SCGN--NDYGQLG------HEKGRKRLQLIPGLDAFVFKKAACGAYHTLAINEWGQLFSW 135

Query: 428 GDGTFGALGHGDRSST-SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
           G  T G LG   ++   S PR V+TL     V  +CG+ H  A+         +NG    
Sbjct: 136 GSNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALT--------NNG---- 183

Query: 487 KLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
           +L++WG  +EGQLG G D +  + P  +     I    +ACG   +IA++ +G VF  G 
Sbjct: 184 ELYSWGSNSEGQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGK 243

Query: 546 ADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
             +GQLG   +  +  P +++  +++  I   ACG      ++    V+T G G  GQLG
Sbjct: 244 NTFGQLGLNDTQDRNLPCQLQ-TLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLG 302

Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
           HG N N+  P  V  L    V  + CG   T A+   +G
Sbjct: 303 HGSNSNEILPRQVMELMGSTVTQISCGKRHTLALVPSRG 341



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 137/292 (46%), Gaps = 43/292 (14%)

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           D++ WG  IH    LG + + +  IPR++  + +  +I  I CG  +T  IT  G++++ 
Sbjct: 27  DMFCWGSTIHGELGLGGIEDENILIPRELDFK-KAAEIQQIACGENYTVVITQIGEIYSC 85

Query: 428 GDGTFGALGH--GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
           G+  +G LGH  G +    +P     L       A+CG +HT AI E             
Sbjct: 86  GNNDYGQLGHEKGRKRLQLIP----GLDAFVFKKAACGAYHTLAINEWG----------- 130

Query: 486 KKLFTWGDGAEGQLG-----HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
            +LF+WG   EGQLG       ++ PR+V    K        ++ACG     ALT  G++
Sbjct: 131 -QLFSWGSNTEGQLGLNSKNFMESSPRMV----KTLGTSVVVQIACGMKHAFALTNNGEL 185

Query: 541 FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIED--------IACGSYHIAVVSSKSEV 592
           +S GS   GQLG         T I+  IK ++I          IACG YH   +S    V
Sbjct: 186 YSWGSNSEGQLG-------LGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAV 238

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           + WGK   GQLG  D +++  P  ++ L++ ++    CG  F+  + +  GV
Sbjct: 239 FGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGV 290



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 132/285 (46%), Gaps = 30/285 (10%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHE-DFDGLGDVFIWGEGLGNGLLGGAVNG 273
           GL+  N   S+    +   +S V   + G  H       G+++ WG     G LG     
Sbjct: 144 GLNSKNFMESSPRMVKTLGTSVVVQIACGMKHAFALTNNGELYSWGSN-SEGQLG----- 197

Query: 274 VEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
                 D +  + PK + + + +    IACG  H++ ++K G +F WG+ + G+LG    
Sbjct: 198 ---LGTDIKYEIKPKFISAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDT 254

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
            D + P  +  L  + I   ACGE  +  +T+ G ++T G G++  G LG  S  +  +P
Sbjct: 255 QDRNLPCQLQTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMY--GQLGHGSNSNEILP 312

Query: 394 RKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
           R+V  ++ G  ++ I CG  HT A+  S G+++ +G G  G LG+    S + P+ V   
Sbjct: 313 RQVM-ELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVVH-- 369

Query: 453 KELKTVMASCGVW---HTAAIVEVAGK-TSGSNGLSSKKLFTWGD 493
                     G W   + + I++V  +  S + G   K +FT GD
Sbjct: 370 ----------GPWIAPNGSTIMDVNKQFNSRTIGYIVKHIFTGGD 404


>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Equus caballus]
          Length = 1057

 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 166/346 (47%), Gaps = 20/346 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +       SG+       +F WG    GQLG  D   R  P  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT-----LSGA-------IFGWGRNKFGQLGLNDENDRYFPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLHDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDYKKQASPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 102/198 (51%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  +        D +    P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGI--------DYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D  +P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Loxodonta africana]
          Length = 1049

 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 165/346 (47%), Gaps = 20/346 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLADIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 132/283 (46%), Gaps = 34/283 (12%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDA 344
           +P+ ++S   +    +ACG  H++ ++K  ++F WG+   G+LG G++    + PKL+ +
Sbjct: 127 VPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKS 186

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           L G     VA G  H+  +TLSG ++ WG   +  G LG   E   ++P  +   +   +
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGR--NKFGQLGLNDENDRYVPNLLKS-LRSQK 243

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           I  ICCG  HTAA+T  G +FTFG G +G LGH   S    PR+V  L        +CG 
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGR 303

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK---------V 515
            HT+A V            SS +++++G G  GQLG G    R  P  VK          
Sbjct: 304 QHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWLPYNGQC 352

Query: 516 SDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG 558
             DI +    C            ++FS G   +    SP + G
Sbjct: 353 PPDIDYEDYFC----------VKRIFSGGDQSFSHYSSPQNCG 385



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  ++  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGLDCKKQASPKLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 101/202 (50%), Gaps = 21/202 (10%)

Query: 254 DVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAV 309
           +VF WG+     LG GL             D +    PK+L+S + +    +A G  H+ 
Sbjct: 157 EVFCWGQNKYGQLGLGL-------------DCKKQASPKLLKSLLGIPFMQVAAGGAHSF 203

Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
           ++T  G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G +
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263

Query: 370 YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFG 428
           +T+G G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG
Sbjct: 264 FTFGAG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFG 320

Query: 429 DGTFGALGHGDRSSTSVPREVE 450
            G  G LG G  S+   P  V+
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342


>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Nomascus leucogenys]
          Length = 1057

 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLV 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  ++  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLVGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++L+S V +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pongo abelii]
          Length = 4581

 Score =  162 bits (410), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3697 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 3746

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 3747 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 3806

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 3807 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 3863

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 3864 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG----------SGDAQTLCLTDDDTV 3913

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 3914 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 3973

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 3974 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4031

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4032 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4062



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 173/355 (48%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 610 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 716

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 469 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 528

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 529 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 586

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 587 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 693

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 753

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 754 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 781



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 194/395 (49%), Gaps = 44/395 (11%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF WG       LGG  N         +   +P   E+   L+   +A GSK    VT +
Sbjct: 2712 VFSWGLN-DKDQLGGLKN---------KKIKVPSFSETLSALNVVQVAGGSKSLFAVTVE 2761

Query: 315  GQIFSWGEGSG-GKLGHGVEA-DVSYPK-LIDALNGSNIHMVAC--GEFHTCAVTLSGDL 369
            G++++ GE +     G G+ +  V  P   I AL+   +  VA   G   T    + G +
Sbjct: 2762 GKVYACGEATKWPAWGLGISSGTVPIPHGXITALSSYVVKKVAVHSGTSQTGFXPVDGKV 2821

Query: 370  YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
            ++WG+G  + G LG  S +    PR +   ++  +I  I CG  H+AA+TS+G+L+T+G 
Sbjct: 2822 FSWGEG--DDGKLGHFSRM----PRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGL 2874

Query: 430  GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL- 488
            G +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L 
Sbjct: 2875 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLV 2923

Query: 489  FTWGDGAEGQLGHGDAEPRV----VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            F+ GDG   ++G G   P V    +P  ++  +    C++ CG   ++ALT +G V++ G
Sbjct: 2924 FSLGDGDLWKIGPG---PEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWG 2980

Query: 545  SADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC-GSYHIAVVSSKSEVYTWGKGANGQ 602
              DY +LG       + P  +EG ++ + I   +C G+ H   V+   +VY WG   +GQ
Sbjct: 2981 KGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVACSCSGALHCLAVTDSGQVYAWGDNDHGQ 3039

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             G+G     + PTLV+ L  +++  V CGS+ + A
Sbjct: 3040 QGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVA 3074



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 170/351 (48%), Gaps = 49/351 (13%)

Query: 298  AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            A+ +A G + A   T + ++FSWG     +LG      +  P   + L+  N+  VA G 
Sbjct: 2695 AKRMAAGLESAA--TIRTKVFSWGLNDKDQLGGLKNKKIKVPSFSETLSALNVVQVAGGS 2752

Query: 358  FHTCAVTLSGDLY---------TWGDGIHNLGLL----GQVSEISHWIPRKVSGQMEGLQ 404
                AVT+ G +Y          WG GI + G +    G ++ +S ++ +KV        
Sbjct: 2753 KSLFAVTVEGKVYACGEATKWPAWGLGISS-GTVPIPHGXITALSSYVVKKV-------- 2803

Query: 405  ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
              ++  G   T      GK+F++G+G  G LGH  R    +PR +E LK  +    +CG 
Sbjct: 2804 --AVHSGTSQTGFXPVDGKVFSWGEGDDGKLGHFSR----MPRLIEALKTKRIRDIACGS 2857

Query: 465  WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
             H+AA+             SS +L+TWG G  G+LGHGD   ++ P  VKV       +V
Sbjct: 2858 SHSAALT------------SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 2905

Query: 525  ACG--HSITIALTATGQVFSMGSADYGQLGSPGSTGK---FPTRIEGNIKHRYIEDIACG 579
            ACG   + T+ALT  G VFS+G  D  ++G PG   K    P  IE  +  + +  I CG
Sbjct: 2906 ACGSRDAQTLALTDEGLVFSLGDGDLWKIG-PGPEVKGCNIPQNIE-RLNGQGVCQIECG 2963

Query: 580  SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
            +     ++    V+TWGKG   +LGHG + + + P +VE LR K++ +  C
Sbjct: 2964 AQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSC 3014



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
              L             P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 479 SDTLA------------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 526 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 577 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 637 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 695

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 141/287 (49%), Gaps = 33/287 (11%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF WGEG  +G LG               + +P+++E+      + IACGS H+  +T
Sbjct: 2819 GKVFSWGEG-DDGKLG-------------HFSRMPRLIEALKTKRIRDIACGSSHSAALT 2864

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
              G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T  G ++
Sbjct: 2865 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVF 2924

Query: 371  TWGDGIHNLGLLGQVSEISHW-IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
            + GDG  +L  +G   E+    IP+ +  ++ G  +  I CG   + A+T +G ++T+G 
Sbjct: 2925 SLGDG--DLWKIGPGPEVKGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGK 2981

Query: 430  GTFGALGHGDRSSTSVPREVETLKELKTVMASC-GVWHTAAIVEVAGKTSGSNGLSSKKL 488
            G +  LGHG       P+ VE L+  K V  SC G  H  A+ +            S ++
Sbjct: 2982 GDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTD------------SGQV 3029

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
            + WGD   GQ G+G       P  V+  +     +VACG S ++A T
Sbjct: 3030 YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 3076



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 554

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 555 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 668

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3698 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 3753

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 3754 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 3802

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 3803 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 3861

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + DIACGS       ++    V++WG G 
Sbjct: 3862 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDAQTLCLTDDDTVWSWGDGD 3920

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 3921 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3959



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 77/228 (33%), Positives = 101/228 (44%), Gaps = 17/228 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F++G      LG        VP   ETL  L  V  + G     A V V G
Sbjct: 2704 SAATIRTKVFSWGLNDKDQLGGLKNKKIKVPSFSETLSALNVVQVAGGSKSLFA-VTVEG 2762

Query: 476  KTSGSNGLSSKKLFTWGDGAEG---QLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
            K        + K   WG G       + HG     +  L   V   ++   V  G S T 
Sbjct: 2763 KVYACG--EATKWPAWGLGISSGTVPIPHG----XITALSSYVVKKVA---VHSGTSQTG 2813

Query: 533  ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
                 G+VFS G  D G+LG      + P  IE  +K + I DIACGS H A ++S  E+
Sbjct: 2814 FXPVDGKVFSWGEGDDGKLGH---FSRMPRLIEA-LKTKRIRDIACGSSHSAALTSSGEL 2869

Query: 593  YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 2870 YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 2917



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 734 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 778



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 3698 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 3745

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3746 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3805

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 3806 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 3865

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 3866 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 3907



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 69/122 (56%), Gaps = 4/122 (3%)

Query: 301  IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC-GEFH 359
            I CG++ ++ +TK G +++WG+G   +LGHG +  V  P++++ L G  I   +C G  H
Sbjct: 2960 IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALH 3019

Query: 360  TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
              AVT SG +Y WGD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T
Sbjct: 3020 CLAVTDSGQVYAWGDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWT 3076

Query: 420  SA 421
            + 
Sbjct: 3077 TV 3078


>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Cricetulus griseus]
          Length = 1049

 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 158/324 (48%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + + CG +H V V   G +++ G    G+LGH  E     P+ + AL+  NI  V+CGE
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93

Query: 358 FHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            HT A+   G +Y+WG D    LGLLG    I   +PR +   +  +QI  + CG +H+ 
Sbjct: 94  AHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIR--VPRNIKS-LSDIQIVQVACGYYHSL 150

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A++ A ++F +G   +G LG G D    + P+ +++L  +  +  + G  H+  +     
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
                    S  +F WG    GQLG  D   R VP  +K         + CG   T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHI-AVVSSKSEVYT 594
             G VF+ G+  YGQLG   ++ +   R    +    +  +ACG  H  A V S   +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYS 318

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G G NGQLG G   N+++P  V+
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 156/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++++G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  V CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQVACGRQHTSAF 309



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 142/284 (50%), Gaps = 22/284 (7%)

Query: 291 ESTVVLDAQSI---ACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVEADVSYPKLIDALN 346
           E  V LDAQ+I   +CG  H + +  +GQ++SWG  S G+LG  G E  +  P+ I +L+
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLS 135

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
              I  VACG +H+ A++ + +++ WG   +  G LG   +       ++   + G+   
Sbjct: 136 DIQIVQVACGYYHSLALSKASEVFCWGQ--NKYGQLGLGIDCKKQTSPQLIKSLLGIPFM 193

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            +  G  H+  +T +G +F +G   FG LG  D +   VP  +++L+  K V   CG  H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           TAA+ +  G            +FT+G G  GQLGH      + P  V         +VAC
Sbjct: 254 TAALTKEGG------------VFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVAC 301

Query: 527 GHSITIALT-ATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGN 567
           G   T A   ++G+++S G    GQLG+ GST   K P  ++GN
Sbjct: 302 GRQHTSAFVPSSGRIYSFGLGGNGQLGT-GSTSNRKSPFTVKGN 344



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 118/230 (51%), Gaps = 15/230 (6%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDA 344
           +P+ ++S   +    +ACG  H++ ++K  ++F WG+   G+LG G++    + P+LI +
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKS 186

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           L G     VA G  H+  +TLSG ++ WG   +  G LG   E   ++P  +   +   +
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGR--NKFGQLGLNDENDRYVPNLLKS-LRSQK 243

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           I  ICCG  HTAA+T  G +FTFG G +G LGH   S    PR+V  L        +CG 
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGR 303

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
            HT+A V            SS +++++G G  GQLG G    R  P  VK
Sbjct: 304 QHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+  +    LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRK-SDFFANKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           ++WG  ++GQLG   +E  + VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIDCKKQTS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ + CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
           [Felis catus]
          Length = 621

 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIK-SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 101/198 (51%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  +        D +    P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGI--------DCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Cricetulus griseus]
          Length = 1057

 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 158/324 (48%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + + CG +H V V   G +++ G    G+LGH  E     P+ + AL+  NI  V+CGE
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93

Query: 358 FHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            HT A+   G +Y+WG D    LGLLG    I   +PR +   +  +QI  + CG +H+ 
Sbjct: 94  AHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIR--VPRNIKS-LSDIQIVQVACGYYHSL 150

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A++ A ++F +G   +G LG G D    + P+ +++L  +  +  + G  H+  +     
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
                    S  +F WG    GQLG  D   R VP  +K         + CG   T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHI-AVVSSKSEVYT 594
             G VF+ G+  YGQLG   ++ +   R    +    +  +ACG  H  A V S   +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYS 318

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G G NGQLG G   N+++P  V+
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 156/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++++G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  V CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQVACGRQHTSAF 309



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 142/284 (50%), Gaps = 22/284 (7%)

Query: 291 ESTVVLDAQSI---ACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVEADVSYPKLIDALN 346
           E  V LDAQ+I   +CG  H + +  +GQ++SWG  S G+LG  G E  +  P+ I +L+
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLS 135

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
              I  VACG +H+ A++ + +++ WG   +  G LG   +       ++   + G+   
Sbjct: 136 DIQIVQVACGYYHSLALSKASEVFCWGQ--NKYGQLGLGIDCKKQTSPQLIKSLLGIPFM 193

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            +  G  H+  +T +G +F +G   FG LG  D +   VP  +++L+  K V   CG  H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           TAA+ +  G            +FT+G G  GQLGH      + P  V         +VAC
Sbjct: 254 TAALTKEGG------------VFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVAC 301

Query: 527 GHSITIALT-ATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGN 567
           G   T A   ++G+++S G    GQLG+ GST   K P  ++GN
Sbjct: 302 GRQHTSAFVPSSGRIYSFGLGGNGQLGT-GSTSNRKSPFTVKGN 344



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 118/230 (51%), Gaps = 15/230 (6%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDA 344
           +P+ ++S   +    +ACG  H++ ++K  ++F WG+   G+LG G++    + P+LI +
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKS 186

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           L G     VA G  H+  +TLSG ++ WG   +  G LG   E   ++P  +   +   +
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGR--NKFGQLGLNDENDRYVPNLLKS-LRSQK 243

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           I  ICCG  HTAA+T  G +FTFG G +G LGH   S    PR+V  L        +CG 
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGR 303

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
            HT+A V            SS +++++G G  GQLG G    R  P  VK
Sbjct: 304 QHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+  +    LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRK-SDFFANKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           ++WG  ++GQLG   +E  + VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIDCKKQTS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ + CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
          Length = 4725

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 3841 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPIQLIGGEQTLFA 3890

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 3891 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 3950

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 3951 VYSWGEA--EDGKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWG 4007

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 4008 KGRYGRLGHSDSEDQLKPKLVEVLQGHRVVDIACG----------SGDAQTLCLTDDDTV 4057

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 4058 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4117

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 4118 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4175

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 4176 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4206



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 174/355 (49%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 492

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTLPLEEPKVISAFSGKQG 550

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 611 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 717

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  PT +  L  K +  + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPTALPGLDTKHIVGIACG 770



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 157/292 (53%), Gaps = 28/292 (9%)

Query: 255  VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
            VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 2962 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 315  GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
            G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 3012 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 3072 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128

Query: 432  FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
            +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3177

Query: 491  WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
            WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++
Sbjct: 3178 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWT 3229



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 479

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
              L             P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 480 SDTLA------------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    ++P     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 527 RLGHGD----TLP-----LEEPKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWG 577

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 578 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 638 LGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 696

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 143/297 (48%), Gaps = 36/297 (12%)

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3016

Query: 372  WGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
             G+  +    LG          Q++ +S ++ +KV          ++  G  H  A+T  
Sbjct: 3017 CGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKV----------AVHSGGRHATALTVD 3066

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            GK+F++G+G  G LGH  R +   PR +E LK  +    +CG  H+AA+           
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT---------- 3116

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
              SS +L+TWG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G 
Sbjct: 3117 --SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174

Query: 540  VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
            VFS G  D+G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TW
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTW 3230



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 112/222 (50%), Gaps = 12/222 (5%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G V+  GE   NG LG  ++   +    +  AL      S+ V+   ++  G +HA  +T
Sbjct: 3012 GKVYACGEAT-NGRLGLGLSSGTVPIPRQITAL------SSYVVKKVAVHSGGRHATALT 3064

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
              G++FSWGEG  GKLGH    +   P+LI+AL    I  +ACG  H+ A+T SG+LYTW
Sbjct: 3065 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 3124

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDG 430
            G G    G LG     +   P+ V   + G ++  + CG     T A+T  G +F++GDG
Sbjct: 3125 GLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 3181

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
             FG LG G     ++P+ +E L         CG   + A+ +
Sbjct: 3182 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK 3223



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 138/283 (48%), Gaps = 22/283 (7%)

Query: 362  AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            A T+   ++ WG  +++   LG +      +P   S  +  L +  +  G     A+T  
Sbjct: 2955 AATIRTKVFVWG--LNDKDQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 3011

Query: 422  GKLFTFGDGTFGALGHGDRSST-SVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTS 478
            GK++  G+ T G LG G  S T  +PR++  L    +K V    G  H  A+  V GK  
Sbjct: 3012 GKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-VDGK-- 3068

Query: 479  GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
                     +F+WG+G +G+LGH        P  ++         +ACG S + ALT++G
Sbjct: 3069 ---------VFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 3119

Query: 539  QVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSE--VYTW 595
            ++++ G  +YG+LG   +T +  P  ++  + HR I+ +ACGS     ++   E  V++W
Sbjct: 3120 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLVFSW 3178

Query: 596  GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G G  G+LG G +E    P  +E L  + V  + CG+ F+ A+
Sbjct: 3179 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 3221



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 121/248 (48%), Gaps = 31/248 (12%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G                LP  LE   V+
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT--------------LP--LEEPKVI 542

Query: 297 DAQS----------IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
            A S          IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L 
Sbjct: 543 SAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLK 602

Query: 347 GSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           G  +  VAC  G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L 
Sbjct: 603 GLKVIDVACGSGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLD 659

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +  + CG   + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G 
Sbjct: 660 VIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGS 719

Query: 465 WHTAAIVE 472
            H  A+ E
Sbjct: 720 THCLALTE 727



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 2954 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 3000

Query: 476  KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
             +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 3001 GSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3060

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 3061 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3120

Query: 592  VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 3121 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 3842 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPIQLIGGEQTLFAVTADGKL 3897

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 3898 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 3946

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 3947 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4005

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + DIACGS       ++    V++WG G 
Sbjct: 4006 WGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVV-DIACGSGDAQTLCLTDDDTVWSWGDGD 4064

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 4065 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4103



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVIKVRCGSQFSIALT 674

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 735 GSNDQCQHFDTL----RVTKPEPTALPG-LDTKHIVGIACGPAQSFAWSS 779



 Score = 86.3 bits (212), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 109/222 (49%), Gaps = 14/222 (6%)

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            +G ++ +G    G LG  + +   VP   E L  L+ +              + G+ +  
Sbjct: 3842 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPIQL------------IGGEQTLF 3889

Query: 481  NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
               +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 3890 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3949

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 3950 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4009

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              G+LGH D+E++  P LVE L+  +V  + CGS     +CL
Sbjct: 4010 RYGRLGHSDSEDQLKPKLVEVLQGHRVVDIACGSGDAQTLCL 4051



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 20/126 (15%)

Query: 253  GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            G+++ WG G    LG+G              D    L PK+++  +      +ACGS+ A
Sbjct: 3119 GELYTWGLGEYGRLGHG--------------DNTTQLKPKMVKVLLGHRVIQVACGSRDA 3164

Query: 309  --VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
              + +T +G +FSWG+G  GKLG G     + P+ I+ LNG  +  + CG   + A+T S
Sbjct: 3165 QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 3224

Query: 367  GDLYTW 372
            G ++TW
Sbjct: 3225 GVVWTW 3230


>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
          Length = 853

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIK-SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQIAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F ++A G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ IA G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    IA G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIDCKKQAS--------PQLIKSLLGIPFMQIAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
          Length = 1056

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 165/346 (47%), Gaps = 20/346 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQASPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQIAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F ++A G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ IA G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCKKQASPQLIKSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    IA G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIDCKKQAS--------PQLIKSLLGIPFMQIAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Equus caballus]
          Length = 1049

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 166/346 (47%), Gaps = 20/346 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +       SG+       +F WG    GQLG  D   R  P  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT-----LSGA-------IFGWGRNKFGQLGLNDENDRYFPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLHDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDYKKQASPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGV 263



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 102/198 (51%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  +        D +    P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGI--------DYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D  +P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Loxodonta africana]
          Length = 1057

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 155/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEECIRVPRNIKSLADIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  + CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 132/283 (46%), Gaps = 34/283 (12%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDA 344
           +P+ ++S   +    +ACG  H++ ++K  ++F WG+   G+LG G++    + PKL+ +
Sbjct: 127 VPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQASPKLLKS 186

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           L G     VA G  H+  +TLSG ++ WG   +  G LG   E   ++P  +   +   +
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGR--NKFGQLGLNDENDRYVPNLLKS-LRSQK 243

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           I  ICCG  HTAA+T  G +FTFG G +G LGH   S    PR+V  L        +CG 
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGR 303

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK---------V 515
            HT+A V            SS +++++G G  GQLG G    R  P  VK          
Sbjct: 304 QHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWLPYNGQC 352

Query: 516 SDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG 558
             DI +    C            ++FS G   +    SP + G
Sbjct: 353 PPDIDYEDYFC----------VKRIFSGGDQSFSHYSSPQNCG 385



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRNIKSLADIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  ++  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGLDCKKQASPKLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/202 (34%), Positives = 101/202 (50%), Gaps = 21/202 (10%)

Query: 254 DVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAV 309
           +VF WG+     LG GL             D +    PK+L+S + +    +A G  H+ 
Sbjct: 157 EVFCWGQNKYGQLGLGL-------------DCKKQASPKLLKSLLGIPFMQVAAGGAHSF 203

Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
           ++T  G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G +
Sbjct: 204 VLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263

Query: 370 YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFG 428
           +T+G G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG
Sbjct: 264 FTFGAG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFG 320

Query: 429 DGTFGALGHGDRSSTSVPREVE 450
            G  G LG G  S+   P  V+
Sbjct: 321 LGGNGQLGTGSTSNRKSPFTVK 342


>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
            [Dictyostelium fasciculatum]
          Length = 2003

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/395 (28%), Positives = 181/395 (45%), Gaps = 52/395 (13%)

Query: 253  GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            G++F WG      LG+GL  G            +    P  +ES        ++ G +H 
Sbjct: 1213 GELFTWGNNTSGQLGHGLAAG------------KHQSTPMRVESLKQTPIMMMSLGGEHT 1260

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
            V++ +   I+SWG G  G+LGHGV    + PK I+   G  I  +A G +HT  +   GD
Sbjct: 1261 VVIDRSFHIYSWGNGKYGQLGHGVSTPHNLPKRIEEFAGQKISSIATGYWHTLVLRSGGD 1320

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIP-------RKVSGQMEGLQISSICCGPWHTAAITSA 421
            L+ +G   H  G LG ++++ H +P         +    +  +++ I CG  H+   TS 
Sbjct: 1321 LFAFGSNEH--GQLG-LNDLKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSHSVLRTSH 1377

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            G +++FG    G LGHG   S   P+ ++ LK       +CG +HT    ++        
Sbjct: 1378 GDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGPYHTVVTTDL-------- 1429

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT---- 537
                  ++ WG G    LG G  +  +VP  V++  +    +V CG   T  LT      
Sbjct: 1430 ----DSVYCWGQGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDS 1485

Query: 538  ---GQVFSMGSADYGQLG------SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
               G V+  GS+++G+LG      SP     +P  I  +I    + D+A G+   A+++S
Sbjct: 1486 NTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIP-SINSANVVDLASGAEFNALITS 1544

Query: 589  KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDK 623
               +Y WG G +GQ+G+G N++   PT V    +K
Sbjct: 1545 NGALYMWGAGTHGQIGNGKNQDTWIPTRVSLSSEK 1579



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 170/360 (47%), Gaps = 32/360 (8%)

Query: 298  AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA--DVSYPKLIDALNGSNIHMVAC 355
            A+S++CG +HA ++T  G++F+WG  + G+LGHG+ A    S P  +++L  + I M++ 
Sbjct: 1196 AKSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSL 1255

Query: 356  GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
            G  HT  +  S  +Y+WG+G +  G LG      H +P+++  +  G +ISSI  G WHT
Sbjct: 1256 GGEHTVVIDRSFHIYSWGNGKY--GQLGHGVSTPHNLPKRIE-EFAGQKISSIATGYWHT 1312

Query: 416  AAITSAGKLFTFGDGTFGALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
              + S G LF FG    G LG  D +    +P  V T            + H      V 
Sbjct: 1313 LVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRVNT----------ADIHHAGQPTRVT 1362

Query: 475  GKTSGSNG----LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
            G   G +      S   ++++G  A+GQLGHG  E    P  ++     +  ++ CG   
Sbjct: 1363 GIFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGPYH 1422

Query: 531  TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS--- 587
            T+  T    V+  G  ++  LG+  +  +   ++     ++ +E + CG YH A ++   
Sbjct: 1423 TVVTTDLDSVYCWGQGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPM 1482

Query: 588  ----SKSEVYTWGKGANGQLGHGDNE-----NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
                +   VY  G   +G+LG G +      +K  P ++ ++    V  +  G+ F A I
Sbjct: 1483 GDSNTGGNVYICGSSEHGKLGIGGDPRSPSLDKAYPAIIPSINSANVVDLASGAEFNALI 1542


>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
          Length = 928

 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 164/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  V    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  VACGE HT A+   G +Y WG D    LGL G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             +ACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 155/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+ +            + ++F WG 
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  V CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTQVACGRQHTSAF 309



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 142/284 (50%), Gaps = 22/284 (7%)

Query: 291 ESTVVLDAQSI---ACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVEADVSYPKLIDALN 346
           E  V LDAQ+I   ACG  H + +  +GQ+++WG  S G+LG  G E  +  P+ I +L+
Sbjct: 76  EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS 135

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
              I  VACG +H+ A++ + +++ WG   +  G LG   +       ++   + G+   
Sbjct: 136 DIQIVQVACGYYHSLALSKASEVFCWGQ--NKYGQLGLGIDCQKQTSPQLIKSLLGIPFM 193

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            +  G  H+  +T +G +F +G   FG LG  D +   VP  +++L+  K V   CG  H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           TAA+ +  G            +FT+G G  GQLGH      + P  V         +VAC
Sbjct: 254 TAALTKEGG------------VFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVAC 301

Query: 527 GHSITIALT-ATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGN 567
           G   T A   ++G+++S G    GQLG+ GST   K P  ++GN
Sbjct: 302 GRQHTSAFVPSSGRIYSFGLGGNGQLGT-GSTSNRKSPFTVKGN 344



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+  +    LG + E     PR+ S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRR-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  +CG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIDCQKQTS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ + CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Monodelphis domestica]
          Length = 1057

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 163/347 (46%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    Q + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL G    I   +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIK--VPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  I CG +H+ A++   ++F++G    G LG G +  S S P+ +++L 
Sbjct: 130 NIKS-LTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRFVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 157/327 (48%), Gaps = 21/327 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  T G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+      + GS      ++F+WG 
Sbjct: 116 LGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLAL------SKGS------EVFSWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G + + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 +F   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAIC 639
            P  V  L    V  + CG   T+A  
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG   +GQLG    E  + VP  +K   DI   ++ACG+  ++AL+   +VFS G   
Sbjct: 106 YAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNK 165

Query: 548 YGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           +GQLG      +   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 HGQLGLGFELKSQSAPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+   +G LG    G E+ S        P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFSWGQN-KHGQLG---LGFELKSQSA-----PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Monodelphis domestica]
          Length = 1049

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 163/347 (46%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    Q + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL G    I   +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIK--VPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  I CG +H+ A++   ++F++G    G LG G +  S S P+ +++L 
Sbjct: 130 NIKS-LTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRFVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 157/327 (48%), Gaps = 21/327 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  T G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+      + GS      ++F+WG 
Sbjct: 116 LGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLAL------SKGS------EVFSWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G + + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 +F   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAIC 639
            P  V  L    V  + CG   T+A  
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG   +GQLG    E  + VP  +K   DI   ++ACG+  ++AL+   +VFS G   
Sbjct: 106 YAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNK 165

Query: 548 YGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           +GQLG      +   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 HGQLGLGFELKSQSAPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+   +G LG    G E+ S        P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFSWGQN-KHGQLG---LGFELKSQSA-----PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
          Length = 546

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 164/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  V    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  VACGE HT A+   G +Y WG D    LGL G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIK-SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             +ACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 155/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHGV--EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+ + +            ++F WG 
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS------------EVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  V CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTQVACGRQHTSAF 309



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 142/284 (50%), Gaps = 22/284 (7%)

Query: 291 ESTVVLDAQSI---ACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVEADVSYPKLIDALN 346
           E  V LDAQ+I   ACG  H + +  +GQ+++WG  S G+LG  G E  +  P+ I +L+
Sbjct: 76  EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS 135

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
              I  VACG +H+ A++ + +++ WG   +  G LG   +       ++   + G+   
Sbjct: 136 DIQIVQVACGYYHSLALSKASEVFCWGQ--NKYGQLGLGIDCQKQTSPQLIKSLLGIPFM 193

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            +  G  H+  +T +G +F +G   FG LG  D +   VP  +++L+  K V   CG  H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           TAA+ +  G            +FT+G G  GQLGH      + P  V         +VAC
Sbjct: 254 TAALTKEGG------------VFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVAC 301

Query: 527 GHSITIALT-ATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGN 567
           G   T A   ++G+++S G    GQLG+ GST   K P  ++GN
Sbjct: 302 GRQHTSAFVPSSGRIYSFGLGGNGQLGT-GSTSNRKSPFTVKGN 344



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+  +    LG + E     PR+ S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRR-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  +CG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIDCQKQTS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ + CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
 gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
 gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
 gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
          Length = 1049

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 164/346 (47%), Gaps = 20/346 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  V    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  VACGE HT A+   G +Y WG D    LGL G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
             +ACG  H  A V S   +Y++G G NGQLG G   N+++P  V+
Sbjct: 297 TQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 155/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+ +            + ++F WG 
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  V CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTQVACGRQHTSAF 309



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 142/284 (50%), Gaps = 22/284 (7%)

Query: 291 ESTVVLDAQSI---ACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVEADVSYPKLIDALN 346
           E  V LDAQ+I   ACG  H + +  +GQ+++WG  S G+LG  G E  +  P+ I +L+
Sbjct: 76  EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS 135

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
              I  VACG +H+ A++ + +++ WG   +  G LG   +       ++   + G+   
Sbjct: 136 DIQIVQVACGYYHSLALSKASEVFCWGQ--NKYGQLGLGIDCQKQTSPQLIKSLLGIPFM 193

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            +  G  H+  +T +G +F +G   FG LG  D +   VP  +++L+  K V   CG  H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           TAA+ +  G            +FT+G G  GQLGH      + P  V         +VAC
Sbjct: 254 TAALTKEGG------------VFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVAC 301

Query: 527 GHSITIALT-ATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGN 567
           G   T A   ++G+++S G    GQLG+ GST   K P  ++GN
Sbjct: 302 GRQHTSAFVPSSGRIYSFGLGGNGQLGT-GSTSNRKSPFTVKGN 344



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+  +    LG + E     PR+ S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRR-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  +CG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIDCQKQTS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ + CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
          Length = 835

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 158/325 (48%), Gaps = 20/325 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + + CG +H V V   G +++ G    G+LGH  E     P+ + AL+  NI  V+CGE
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGE 93

Query: 358 FHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            HT A+   G +Y+WG D    LGLLG    I   +PR +   +  +QI  + CG +H+ 
Sbjct: 94  AHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIR--VPRNIK-SLSDIQIVQVACGYYHSL 150

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A++ A ++F +G   +G LG G D    + P+ +++L  +  +  + G  H+  +     
Sbjct: 151 ALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT---- 206

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
                    S  +F WG    GQLG  D   R VP  +K         + CG   T ALT
Sbjct: 207 --------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHI-AVVSSKSEVYT 594
             G VF+ G+  YGQLG   ++ +   R    +    +  +ACG  H  A V S   +Y+
Sbjct: 259 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYS 318

Query: 595 WGKGANGQLGHGDNENKQTPTLVEA 619
           +G G NGQLG G   N+++P  V+ 
Sbjct: 319 FGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 156/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++++G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQ 115

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG        VPR +++L +++ V  +CG +H+ A+ +            + ++F W
Sbjct: 116 LGLLG--SEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCW 161

Query: 492 GDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQ
Sbjct: 162 GQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    +
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P  V  L    V  V CG   T+A 
Sbjct: 282 EINPRKVFELMGSIVTQVACGRQHTSAF 309



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 142/284 (50%), Gaps = 22/284 (7%)

Query: 291 ESTVVLDAQSI---ACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVEADVSYPKLIDALN 346
           E  V LDAQ+I   +CG  H + +  +GQ++SWG  S G+LG  G E  +  P+ I +L+
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLS 135

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
              I  VACG +H+ A++ + +++ WG   +  G LG   +       ++   + G+   
Sbjct: 136 DIQIVQVACGYYHSLALSKASEVFCWGQ--NKYGQLGLGIDCKKQTSPQLIKSLLGIPFM 193

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            +  G  H+  +T +G +F +G   FG LG  D +   VP  +++L+  K V   CG  H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           TAA+ +  G            +FT+G G  GQLGH      + P  V         +VAC
Sbjct: 254 TAALTKEGG------------VFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVAC 301

Query: 527 GHSITIALT-ATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGN 567
           G   T A   ++G+++S G    GQLG+ GST   K P  ++GN
Sbjct: 302 GRQHTSAFVPSSGRIYSFGLGGNGQLGT-GSTSNRKSPFTVKGN 344



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 118/230 (51%), Gaps = 15/230 (6%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDA 344
           +P+ ++S   +    +ACG  H++ ++K  ++F WG+   G+LG G++    + P+LI +
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKS 186

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           L G     VA G  H+  +TLSG ++ WG   +  G LG   E   ++P  +   +   +
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGR--NKFGQLGLNDENDRYVPNLLK-SLRSQK 243

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           I  ICCG  HTAA+T  G +FTFG G +G LGH   S    PR+V  L        +CG 
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGR 303

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
            HT+A V            SS +++++G G  GQLG G    R  P  VK
Sbjct: 304 QHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+  +    LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRK-SDFFANKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           ++WG  ++GQLG   +E  + VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCKKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIDCKKQTS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ + CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
          Length = 1082

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251 GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
           G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 199 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 248

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
           VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 249 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 308

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 309 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 365

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
            G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 366 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDVACG----------SGDAQTLCLTDDDTV 415

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 416 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 475

Query: 549 GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 476 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 533

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                Q P LV AL+ K+V  V CGS  T A
Sbjct: 534 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 564



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366 SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
           SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 200 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 255

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 256 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 304

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
            S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 305 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 363

Query: 543 MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
            G   YG+LG   S  +  P  +E    HR + D+ACGS       ++    V++WG G 
Sbjct: 364 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DVACGSGDAQTLCLTDDDTVWSWGDGD 422

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 423 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 461



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 200 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 247

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
              +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 248 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 307

Query: 539 QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 308 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 367

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
             G+LGH D+E++  P LVEAL+  +V  V CGS     +CL
Sbjct: 368 RYGRLGHSDSEDQLKPKLVEALQGHRVVDVACGSGDAQTLCL 409



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 10/114 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G  + L  G+ + V      RR    P+ ++        +IA GS H V  T
Sbjct: 465 GAVYTWGKGDYHRLGHGSDDHV------RR----PRQVQGLQGKKVIAIATGSLHCVCCT 514

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
           + G++++WG+   G+LG G    +  P+L+ AL G  ++ VACG  HT A + S
Sbjct: 515 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 568


>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
          Length = 1270

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 173/360 (48%), Gaps = 17/360 (4%)

Query: 269 GAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKL 328
           G + G    S  +   ++P+ ++     +    ACG+ H +L+T  G+++S G    G+L
Sbjct: 320 GPIQGEVFPSLAKVMVMVPRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQL 379

Query: 329 GHGVEADVS-YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           GH VE+  +  P+L+ AL    I    CG  H+ A+T  G +Y+WG   + +G LGQ ++
Sbjct: 380 GHDVESLPNKRPQLLTALENYIITQACCGTAHSLALTNWGQVYSWGS--NAVGQLGQETD 437

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVP 446
            +  I  ++   +   Q+  I  G +H  A+T++G+L+ +G   +G LG G      S P
Sbjct: 438 TTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTP 497

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP 506
             V++L  +     +CG  H+ A+ +            S  +F WG    GQLG  D   
Sbjct: 498 TLVQSLAGVPIAFIACGGNHSFAVSK------------SGAIFGWGKNTFGQLGLNDLNS 545

Query: 507 RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEG 566
           R  P  ++    +    V+CG   ++ LTA G VF+ G+  +GQLG      +   R+  
Sbjct: 546 RQFPTQLRTLRSLGVRYVSCGDDFSVFLTAGGGVFTCGAGTFGQLGHGSCNNEILPRMVF 605

Query: 567 NIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQV 625
            +    I  IACG  H +A V S+ ++Y +G    GQLG G   N  TP +V      Q+
Sbjct: 606 ELMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQLGIGIVGNYNTPQIVRGPWQSQI 665



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/354 (26%), Positives = 170/354 (48%), Gaps = 37/354 (10%)

Query: 294 VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMV 353
           + +D +++ CG         QG++F     S  K+       V  P+ +D ++   I   
Sbjct: 310 MTVDGENVECGPI-------QGEVFP----SLAKVM------VMVPRKMDWMHAKEIARA 352

Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQ-VSEISHWIPRKVSGQMEGLQISSICCGP 412
           ACG  HT  +T  G +Y+ G+  H  G LG  V  + +  P+ ++  +E   I+  CCG 
Sbjct: 353 ACGASHTLLLTNDGKMYSCGNNDH--GQLGHDVESLPNKRPQLLTA-LENYIITQACCGT 409

Query: 413 WHTAAITSAGKLFTFGDGTFGALGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIV 471
            H+ A+T+ G+++++G    G LG   D +   +PR + ++   + V  + G +H  A+ 
Sbjct: 410 AHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALT 469

Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSI 530
                       +S +L+ WG  A GQLG G    +V  P  V+    +    +ACG + 
Sbjct: 470 ------------NSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQSLAGVPIAFIACGGNH 517

Query: 531 TIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
           + A++ +G +F  G   +GQLG +  ++ +FPT++   ++   +  ++CG      +++ 
Sbjct: 518 SFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLR-TLRSLGVRYVSCGDDFSVFLTAG 576

Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
             V+T G G  GQLGHG   N+  P +V  L   ++  + CG   T A    +G
Sbjct: 577 GGVFTCGAGTFGQLGHGSCNNEILPRMVFELMGSKITQIACGRRHTLAFVPSRG 630



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 143/303 (47%), Gaps = 22/303 (7%)

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV----SEISHWIPRKVSGQMEGLQI 405
           I MV    F    V  +G +   G+ +    + G+V    +++   +PRK+   M   +I
Sbjct: 291 IQMVPVTAFRIEPVGTNGHMTVDGENVECGPIQGEVFPSLAKVMVMVPRKMD-WMHAKEI 349

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS-STSVPREVETLKELKTVMASCGV 464
           +   CG  HT  +T+ GK+++ G+   G LGH   S     P+ +  L+      A CG 
Sbjct: 350 ARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALENYIITQACCGT 409

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCK 523
            H+ A+                ++++WG  A GQLG   D   +++P  ++        +
Sbjct: 410 AHSLALTNWG------------QVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQ 457

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSY 581
           +A GH   +ALT +G++++ GS  YGQLG   +  K   PT ++ ++    I  IACG  
Sbjct: 458 IAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVSTPTLVQ-SLAGVPIAFIACGGN 516

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
           H   VS    ++ WGK   GQLG  D  ++Q PT +  LR   V+ V CG +F+  +   
Sbjct: 517 HSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCGDDFSVFLTAG 576

Query: 642 KGV 644
            GV
Sbjct: 577 GGV 579


>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
 gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
 gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
          Length = 1049

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 166/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL+G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
            +IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 155/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+ +            + ++F WG 
Sbjct: 116 LGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTEIACGRQHTSAF 309



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  ++  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++L+S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|403335798|gb|EJY67083.1| hypothetical protein OXYTRI_12623 [Oxytricha trifallax]
          Length = 1128

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 187/399 (46%), Gaps = 43/399 (10%)

Query: 251 GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDAL-LPKVLESTVVLDAQSIACGSKHAV 309
           G  + F WG    N  +G   +G E    DR+    LPK L   V++  Q ++CGS H  
Sbjct: 4   GYTEFFSWG----NDEMGQLGHGQE--GPDRKKIFNLPKSLSFEVLI--QQVSCGSAHTS 55

Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEAD--VSYPKLIDALNG--SNIHMVACGEFHTCAVTL 365
            ++KQG +FS+G  S G+LG    A    S P LI  L    +N   ++CG FHT  +T 
Sbjct: 56  FISKQGYVFSFGCNSDGQLGVNDPAIKFSSAPLLISDLVSLQTNPVQISCGGFHTAVLTS 115

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWI--PRKVSGQMEGLQISSICCGPWHTAAITSAGK 423
            GD+Y WG  +   G  G+    + ++  P K+           + CG  HTA ++S G+
Sbjct: 116 VGDVYIWGRNLQ--GQCGRSINYNQFMFAPHKLHTDSANKTFRQVDCGDQHTAVVSSTGE 173

Query: 424 LFTFGDGTFGALGHGDRSSTSVPRE--VETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           L+TFGD + G LG G     +V R   V  + E +T+  SCG  HT  +        G+ 
Sbjct: 174 LYTFGDNSEGQLGIGVEFKNTVDRAALVTGISE-ETIQVSCGYKHTLVLT-----NHGT- 226

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
                 +F  G     +L  G  +    P+ ++  D  +  K+  G   ++A+T+  ++ 
Sbjct: 227 ------VFGMGTNKRYELASGTLQKSSQPIRIQTIDMFAVEKIIAG-GFSVAITSQNELL 279

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHI--AVVSSKSEVYTWGKGA 599
             GS D+G   SP     F   +      R+++     SY    A +  +  VYTWG+  
Sbjct: 280 VWGSGDFGVFQSPQKI--FMEDV------RFVDVSLSKSYDSFGAAIDDQGFVYTWGQNQ 331

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            GQLG GD   ++ PT +  LR K+V+ +V G +F  A+
Sbjct: 332 FGQLGQGDFRLRKLPTKIPQLRKKKVRQLVAGGSFIVAL 370


>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
          Length = 979

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 166/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL+G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
            +IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 155/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+ +            + ++F WG 
Sbjct: 116 LGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTEIACGRQHTSAF 309



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  ++  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++L+S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
          Length = 1066

 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 164/346 (47%), Gaps = 20/346 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  V    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 23  LGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 80

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  VACGE HT A+   G +Y WG D    LGL G  SE    +PR
Sbjct: 81  RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG--SEECIRVPR 138

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 139 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL 197

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 198 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 245

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 246 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 305

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
             +ACG  H  A V S   +Y++G G NGQLG G   N+++P  V+
Sbjct: 306 TQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 351



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 155/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 10  MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 68

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 69  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ 124

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+ +            + ++F WG 
Sbjct: 125 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 172

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 173 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 232

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 233 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 292

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  V CG   T+A 
Sbjct: 293 NPRKVFELMGSIVTQVACGRQHTSAF 318



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 142/284 (50%), Gaps = 22/284 (7%)

Query: 291 ESTVVLDAQSI---ACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVEADVSYPKLIDALN 346
           E  V LDAQ+I   ACG  H + +  +GQ+++WG  S G+LG  G E  +  P+ I +L+
Sbjct: 85  EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS 144

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
              I  VACG +H+ A++ + +++ WG   +  G LG   +       ++   + G+   
Sbjct: 145 DIQIVQVACGYYHSLALSKASEVFCWGQ--NKYGQLGLGIDCQKQTSPQLIKSLLGIPFM 202

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            +  G  H+  +T +G +F +G   FG LG  D +   VP  +++L+  K V   CG  H
Sbjct: 203 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 262

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           TAA+ +  G            +FT+G G  GQLGH      + P  V         +VAC
Sbjct: 263 TAALTKEGG------------VFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVAC 310

Query: 527 GHSITIALT-ATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGN 567
           G   T A   ++G+++S G    GQLG+ GST   K P  ++GN
Sbjct: 311 GRQHTSAFVPSSGRIYSFGLGGNGQLGT-GSTSNRKSPFTVKGN 353



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+  +    LG + E     PR+ S      ++  + CG  HT  +   G ++T G
Sbjct: 10  MLCWGNASYGQLGLGGIDEEIVLEPRR-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 68

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  +CG  HT A+ +              ++
Sbjct: 69  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALND------------KGQV 114

Query: 489 FTWGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 115 YAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 174

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 175 YGQLGLGIDCQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 233

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 234 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 272



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    +A G  H+ ++T 
Sbjct: 166 EVFCWGQN-KYGQLGLGIDCQKQTS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 216

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 217 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 276

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ + CG  HT+A + S+G++++FG G  
Sbjct: 277 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 333

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 334 GQLGTGSTSNRKSPFTVK 351


>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
 gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
          Length = 1056

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 182/381 (47%), Gaps = 29/381 (7%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLEST-VVLDAQSIACGSKHAVLVTK 313
           +F WG+    G LG      E  S        P++LE+     + + ++CG  H   + K
Sbjct: 1   MFCWGK-CSEGQLGVGETEQEFIST-------PRLLENLEFSSNVREVSCGWNHTAFLCK 52

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G +++ G    G+LG   E   + P+ + A+    I  V CG+ HT AV+  G ++ WG
Sbjct: 53  DGTVYTCGSNEFGQLGQ--EKSHTNPESVHAIETFTITKVTCGKAHTVAVSDQGLVFAWG 110

Query: 374 DGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           D  +  +GL  +V E    IP+ + G +  + +  I CG  H+ A+T +G LF +GD + 
Sbjct: 111 DNSYGQIGLGSKVKEKVQTIPKMLKG-LAKMSVVQIACGCNHSMALTISGHLFCWGDNSS 169

Query: 433 GALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           G LG G   SS S P  V +L  +  ++ S G  H+ A+             SS  LF W
Sbjct: 170 GQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSFALS------------SSGALFGW 217

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           G    GQLG  D   R +P  +K       C V+CG   T  LT+ G VF+ G    GQL
Sbjct: 218 GKNEYGQLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQL 277

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           G   +  ++  R    +    +  IACG  H +A+V S   VYT+G+G +GQLG G   N
Sbjct: 278 GHNSNHHEYTPRKVFELMGSVVTQIACGRAHTLALVPSSGRVYTFGRGGDGQLGLGVTNN 337

Query: 611 KQTPTLVEA--LRDKQVKSVV 629
             +P   +   LR   +KS++
Sbjct: 338 CNSPMTAKGPWLRSNNIKSML 358



 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 173/330 (52%), Gaps = 26/330 (7%)

Query: 317 IFSWGEGSGGKLGHGV--EADVSYPKLIDALN-GSNIHMVACGEFHTCAVTLSGDLYTWG 373
           +F WG+ S G+LG G   +  +S P+L++ L   SN+  V+CG  HT  +   G +YT G
Sbjct: 1   MFCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCG 60

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
              +  G LGQ  E SH  P  V   +E   I+ + CG  HT A++  G +F +GD ++G
Sbjct: 61  S--NEFGQLGQ--EKSHTNPESVHA-IETFTITKVTCGKAHTVAVSDQGLVFAWGDNSYG 115

Query: 434 ALGHGDRSS---TSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            +G G +      ++P+ ++ L ++  V  +CG  H+ A+              S  LF 
Sbjct: 116 QIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALT------------ISGHLFC 163

Query: 491 WGDGAEGQLGHGDAEPRVV-PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
           WGD + GQLG G     +  P  V   + + F  ++ G + + AL+++G +F  G  +YG
Sbjct: 164 WGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGALFGWGKNEYG 223

Query: 550 QLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           QLG   +T +  PT ++ +++ + +  ++CG  H AV++S   V+T+G G +GQLGH  N
Sbjct: 224 QLGVHDTTDRPLPTLLK-SLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHNSN 282

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            ++ TP  V  L    V  + CG   T A+
Sbjct: 283 HHEYTPRKVFELMGSVVTQIACGRAHTLAL 312



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 124/254 (48%), Gaps = 28/254 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG+    G +G        S    +   +PK+L+    +    IACG  H++ +T
Sbjct: 104 GLVFAWGDN-SYGQIGLG------SKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALT 156

Query: 313 KQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             G +F WG+ S G+LG G   + +S P  + +LNG    +++ G  H+ A++ SG L+ 
Sbjct: 157 ISGHLFCWGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAHSFALSSSGALFG 216

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC---CGPWHTAAITSAGKLFTFG 428
           WG   +  G LG    +     R +   ++ L+   +C   CG  HTA +TS G +FTFG
Sbjct: 217 WGK--NEYGQLG----VHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFG 270

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
            GT G LGH        PR+V  L        +CG  HT A+V            SS ++
Sbjct: 271 CGTSGQLGHNSNHHEYTPRKVFELMGSVVTQIACGRAHTLALVP-----------SSGRV 319

Query: 489 FTWGDGAEGQLGHG 502
           +T+G G +GQLG G
Sbjct: 320 YTFGRGGDGQLGLG 333



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 122/254 (48%), Gaps = 24/254 (9%)

Query: 400 MEGLQISS----ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
           +E L+ SS    + CG  HTA +   G ++T G   FG LG  ++S T+ P  V  ++  
Sbjct: 28  LENLEFSSNVREVSCGWNHTAFLCKDGTVYTCGSNEFGQLGQ-EKSHTN-PESVHAIETF 85

Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA---EPRVVPLC 512
                +CG  HT A+           GL    +F WGD + GQ+G G     + + +P  
Sbjct: 86  TITKVTCGKAHTVAV--------SDQGL----VFAWGDNSYGQIGLGSKVKEKVQTIPKM 133

Query: 513 VKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKH 570
           +K    +S  ++ACG + ++ALT +G +F  G    GQLG     S+   P  +  ++  
Sbjct: 134 LKGLAKMSVVQIACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHSSMSEPAPVL-SLNG 192

Query: 571 RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
                I+ G  H   +SS   ++ WGK   GQLG  D  ++  PTL+++LR + V  V C
Sbjct: 193 VPFMLISAGGAHSFALSSSGALFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQGVCYVSC 252

Query: 631 GSNFTAAICLHKGV 644
           G   TA +    GV
Sbjct: 253 GEKHTAVLTSDGGV 266


>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
          Length = 1183

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251 GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
           G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 299 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 348

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
           VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 349 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 408

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 409 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 465

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
            G +G LGH D      P+ VE L+  + +  +CG          +G            +
Sbjct: 466 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG----------SGDAQTLCLTDDDTV 515

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 516 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 575

Query: 549 GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 576 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 633

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                Q P LV AL+ K+V  V CGS  T A
Sbjct: 634 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 664



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366 SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
           SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 300 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 355

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 356 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 404

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
            S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 405 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 463

Query: 543 MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
            G   YG+LG   S  +  P  +E    HR I DIACGS       ++    V++WG G 
Sbjct: 464 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI-DIACGSGDAQTLCLTDDDTVWSWGDGD 522

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 523 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 561



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 112/228 (49%), Gaps = 14/228 (6%)

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           T +   +G ++ +G    G LG  + +   VP   E L  L+ V              + 
Sbjct: 294 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IG 341

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITI 532
           G+ +     +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +
Sbjct: 342 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCL 401

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
           AL++ G+V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++
Sbjct: 402 ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 461

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           YTWGKG  G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 462 YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 509



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 10/114 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G  + L  G+ + V      RR    P+ ++        +IA GS H V  T
Sbjct: 565 GAVYTWGKGDYHRLGHGSDDHV------RR----PRQVQGLQGKKVIAIATGSLHCVCCT 614

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
           + G++++WG+   G+LG G    +  P+L+ AL G  ++ VACG  HT A + S
Sbjct: 615 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 668


>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
 gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
          Length = 1057

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 164/346 (47%), Gaps = 20/346 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  V    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  VACGE HT A+   G +Y WG D    LGL G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
             +ACG  H  A V S   +Y++G G NGQLG G   N+++P  V+
Sbjct: 297 TQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 155/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+ +            + ++F WG 
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  V CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTQVACGRQHTSAF 309



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 142/284 (50%), Gaps = 22/284 (7%)

Query: 291 ESTVVLDAQSI---ACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVEADVSYPKLIDALN 346
           E  V LDAQ+I   ACG  H + +  +GQ+++WG  S G+LG  G E  +  P+ I +L+
Sbjct: 76  EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS 135

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
              I  VACG +H+ A++ + +++ WG   +  G LG   +       ++   + G+   
Sbjct: 136 DIQIVQVACGYYHSLALSKASEVFCWGQ--NKYGQLGLGIDCQKQTSPQLIKSLLGIPFM 193

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            +  G  H+  +T +G +F +G   FG LG  D +   VP  +++L+  K V   CG  H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           TAA+ +  G            +FT+G G  GQLGH      + P  V         +VAC
Sbjct: 254 TAALTKEGG------------VFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVAC 301

Query: 527 GHSITIALT-ATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGN 567
           G   T A   ++G+++S G    GQLG+ GST   K P  ++GN
Sbjct: 302 GRQHTSAFVPSSGRIYSFGLGGNGQLGT-GSTSNRKSPFTVKGN 344



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+  +    LG + E     PR+ S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRR-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  +CG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIDCQKQTS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ + CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           terrestris]
          Length = 1104

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/367 (31%), Positives = 175/367 (47%), Gaps = 28/367 (7%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           D+F WG    +G LG  + G+E         L+P  ++     + Q IACG  + V++T 
Sbjct: 48  DMFCWGNT-RHGELG--LGGIE-----DEIILVPCEVDFKKASEIQQIACGENYTVVITH 99

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G+I+S G    G+LGH  E      +LI  L+       ACG +HT AV   G L++WG
Sbjct: 100 DGKIYSCGNNDYGQLGH--EQGRKRLQLILGLDAFVFKKAACGAYHTIAVNEWGQLFSWG 157

Query: 374 DGIHNLGLLGQVSE-ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
              ++ G LG  S+      PR V      + I  I CG  H  A+T+ G+L+++G  + 
Sbjct: 158 S--NSEGQLGLNSKNFMECSPRMVKTLGTSI-IVQIACGMKHALALTNNGELYSWGSNSE 214

Query: 433 GALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           G LG G D      P+ + TL  +     +CG +H+ AI +            S  +F W
Sbjct: 215 GQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISK------------SGAIFGW 262

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           G    GQLG  D + R +P  ++   +   C  ACG   ++ LT  G VF+ G+  YGQL
Sbjct: 263 GKNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQL 322

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           G   +  +   R    +    +  I+CG  H +A+V S+  VY WG G  GQLG+    +
Sbjct: 323 GHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRS 382

Query: 611 KQTPTLV 617
             TP +V
Sbjct: 383 TTTPQVV 389



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 160/341 (46%), Gaps = 29/341 (8%)

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEAD--VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           + K+  +F WG    G+LG G   D  +  P  +D    S I  +ACGE +T  +T  G 
Sbjct: 43  LLKKEDMFCWGNTRHGELGLGGIEDEIILVPCEVDFKKASEIQQIACGENYTVVITHDGK 102

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ---ISSICCGPWHTAAITSAGKLF 425
           +Y+ G+  ++ G LG      H   RK    + GL         CG +HT A+   G+LF
Sbjct: 103 IYSCGN--NDYGQLG------HEQGRKRLQLILGLDAFVFKKAACGAYHTIAVNEWGQLF 154

Query: 426 TFGDGTFGALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           ++G  + G LG   ++     PR V+TL     V  +CG+ H  A+         +NG  
Sbjct: 155 SWGSNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACGMKHALALT--------NNG-- 204

Query: 485 SKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
             +L++WG  +EGQLG G D    + P  +     +    +ACG   +IA++ +G +F  
Sbjct: 205 --ELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGW 262

Query: 544 GSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
           G   +GQLG   +  +  P +++  +++  +   ACG      ++    V+T G G  GQ
Sbjct: 263 GKNTFGQLGLNDTQNRNLPYQLQ-TLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQ 321

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
           LGHG N N+  P  V  L    V  + CG   T A+   +G
Sbjct: 322 LGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQG 362



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 132/266 (49%), Gaps = 30/266 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG      L   + N +E S        + K L +++++    IACG KHA+ +T
Sbjct: 151 GQLFSWGSNSEGQLGLNSKNFMECSPR------MVKTLGTSIIV---QIACGMKHALALT 201

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             G+++SWG  S G+LG GV+      PKLI+ L G  I  +ACG +H+ A++ SG ++ 
Sbjct: 202 NNGELYSWGSNSEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFG 261

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC---CGPWHTAAITSAGKLFTFG 428
           WG   +  G LG    ++    R +  Q++ L+ + +C   CG   +  +T  G +FT G
Sbjct: 262 WGK--NTFGQLG----LNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCG 315

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
            G +G LGHG  ++  +PR+V  L        SCG  HT A+V   G+           +
Sbjct: 316 AGMYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGR-----------V 364

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVK 514
           + WG G  GQLG+        P  V+
Sbjct: 365 YAWGLGGAGQLGNNSTRSTTTPQVVR 390



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 133/284 (46%), Gaps = 27/284 (9%)

Query: 368 DLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
           D++ WG+  H  LGL G   EI   +P +V  + +  +I  I CG  +T  IT  GK+++
Sbjct: 48  DMFCWGNTRHGELGLGGIEDEII-LVPCEVDFK-KASEIQQIACGENYTVVITHDGKIYS 105

Query: 427 FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            G+  +G LGH         + +  L       A+CG +HT A+ E              
Sbjct: 106 CGNNDYGQLGH--EQGRKRLQLILGLDAFVFKKAACGAYHTIAVNEWG------------ 151

Query: 487 KLFTWGDGAEGQLG-----HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
           +LF+WG  +EGQLG       +  PR+V    K        ++ACG    +ALT  G+++
Sbjct: 152 QLFSWGSNSEGQLGLNSKNFMECSPRMV----KTLGTSIIVQIACGMKHALALTNNGELY 207

Query: 542 SMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
           S GS   GQLG       +   ++   +    I  IACG YH   +S    ++ WGK   
Sbjct: 208 SWGSNSEGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISKSGAIFGWGKNTF 267

Query: 601 GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           GQLG  D +N+  P  ++ LR+ +V    CG  F+  + +  GV
Sbjct: 268 GQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGV 311


>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
          Length = 1057

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 164/346 (47%), Gaps = 20/346 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  V    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  VACGE HT A+   G +Y WG D    LGL G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
             +ACG  H  A V S   +Y++G G NGQLG G   N+++P  V+
Sbjct: 297 TQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 155/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+ +            + ++F WG 
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  V CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTQVACGRQHTSAF 309



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 142/284 (50%), Gaps = 22/284 (7%)

Query: 291 ESTVVLDAQSI---ACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVEADVSYPKLIDALN 346
           E  V LDAQ+I   ACG  H + +  +GQ+++WG  S G+LG  G E  +  P+ I +L+
Sbjct: 76  EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS 135

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
              I  VACG +H+ A++ + +++ WG   +  G LG   +       ++   + G+   
Sbjct: 136 DIQIVQVACGYYHSLALSKASEVFCWGQ--NKYGQLGLGIDCQKQTSPQLIKSLLGIPFM 193

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            +  G  H+  +T +G +F +G   FG LG  D +   VP  +++L+  K V   CG  H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           TAA+ +  G            +FT+G G  GQLGH      + P  V         +VAC
Sbjct: 254 TAALTKEGG------------VFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVAC 301

Query: 527 GHSITIALT-ATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGN 567
           G   T A   ++G+++S G    GQLG+ GST   K P  ++GN
Sbjct: 302 GRQHTSAFVPSSGRIYSFGLGGNGQLGT-GSTSNRKSPFTVKGN 344



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+  +    LG + E     PR+ S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRR-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  +CG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIDCQKQTS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ + CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
          Length = 1319

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251  GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
            G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 755  GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 804

Query: 311  VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
            VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 805  VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 864

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 865  VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 921

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G +G LGH D      P+ VE L+  + V  +CG          +G            +
Sbjct: 922  KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG----------SGDAQTLCLTDDDTV 971

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 972  WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 1031

Query: 549  GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 1032 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 1089

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                 Q P LV AL+ K+V  V CGS  T A
Sbjct: 1090 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 1120



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/200 (36%), Positives = 105/200 (52%), Gaps = 21/200 (10%)

Query: 446 PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE 505
           PR +E LK  +    +CG  H+AA+             SS +L+TWG G  G+LGHGD  
Sbjct: 6   PRLIEALKTKRIRDIACGSSHSAALT------------SSGELYTWGLGEYGRLGHGDNT 53

Query: 506 PRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPT 562
            ++ P  VKV       +VACG   + T+ALT  G VFS G  D+G+LG  GS G   P 
Sbjct: 54  TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 113

Query: 563 RIEGNIKHRYIEDIACGS-YHIAVVSS----KSEVYTWGKGANGQLGHGDNENKQTPTLV 617
            IE  +  + +  I CG+ + +A+  S      +VY WG   +GQ G+G     + PTLV
Sbjct: 114 NIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLV 172

Query: 618 EALRDKQVKSVVCGSNFTAA 637
           + L  +++  V CGS+ + A
Sbjct: 173 QGLEGQKITRVACGSSHSVA 192



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 111/197 (56%), Gaps = 20/197 (10%)

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
           PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G +G LGHGD ++   P+ V+ L
Sbjct: 6   PRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL 64

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FTWGDGAEGQLGHGDAEPRVVPL 511
              + +  +CG            + + +  L+ + L F+WGDG  G+LG G +E   +P 
Sbjct: 65  LGHRVIQVACG-----------SRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQ 113

Query: 512 CVKVSDDISFCKVACGHSITIALTATG-----QVFSMGSADYGQLGSPGST-GKFPTRIE 565
            ++  +    C++ CG   ++ALT +G     QV++ G  D+GQ G+  +T  + PT ++
Sbjct: 114 NIERLNGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQ 173

Query: 566 GNIKHRYIEDIACGSYH 582
           G ++ + I  +ACGS H
Sbjct: 174 G-LEGQKITRVACGSSH 189



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 12/199 (6%)

Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
           P+LI+AL    I  +ACG  H+ A+T SG+LYTWG G    G LG     +   P+ V  
Sbjct: 6   PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLG--EYGRLGHGDNTTQLKPKMVK- 62

Query: 399 QMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK 456
            + G ++  + CG     T A+T  G +F++GDG FG LG G     ++P+ +E L    
Sbjct: 63  VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG 122

Query: 457 TVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
                CG   + A+ +       S  + + +++ WGD   GQ G+G       P  V+  
Sbjct: 123 VCQIECGAQFSLALTK-------SGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGL 175

Query: 517 DDISFCKVACGHSITIALT 535
           +     +VACG S ++A T
Sbjct: 176 EGQKITRVACGSSHSVAWT 194



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366  SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 756  SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 811

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 812  YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 860

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 861  -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 919

Query: 543  MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
             G   YG+LG   S  +  P  +E    HR + DIACGS       ++    V++WG G 
Sbjct: 920  WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDAQTLCLTDDDTVWSWGDGD 978

Query: 600  NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 979  YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 1017



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 10/194 (5%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+++E+      + IACGS H+  +T  G++++WG G  G+LGHG       PK++  L 
Sbjct: 6   PRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLL 65

Query: 347 GSNIHMVACG--EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           G  +  VACG  +  T A+T  G +++WGDG  + G LG+       IP+ +  ++ G  
Sbjct: 66  GHRVIQVACGSRDAQTLALTDEGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQG 122

Query: 405 ISSICCGPWHTAAITSAG-----KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
           +  I CG   + A+T +G     +++ +GD   G  G+G  +    P  V+ L+  K   
Sbjct: 123 VCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITR 182

Query: 460 ASCGVWHTAAIVEV 473
            +CG  H+ A   V
Sbjct: 183 VACGSSHSVAWTTV 196



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           +G ++ +G    G LG  + +   VP   E L  L+ V              + G+ +  
Sbjct: 756 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 803

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
              +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 804 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 863

Query: 539 QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 864 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 923

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
             G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 924 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 965



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 88/179 (49%), Gaps = 28/179 (15%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           G+++ WG G    LG+G              D    L PK+++  +      +ACGS+ A
Sbjct: 34  GELYTWGLGEYGRLGHG--------------DNTTQLKPKMVKVLLGHRVIQVACGSRDA 79

Query: 309 --VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
             + +T +G +FSWG+G  GKLG G     + P+ I+ LNG  +  + CG   + A+T S
Sbjct: 80  QTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKS 139

Query: 367 G-----DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G      +Y WGD  H  G  G  +   +  P  V G +EG +I+ + CG  H+ A T+
Sbjct: 140 GVVWTWQVYAWGDNDH--GQQGNGTTTVNRKPTLVQG-LEGQKITRVACGSSHSVAWTT 195



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 69/118 (58%), Gaps = 4/118 (3%)

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYH 582
           +ACG S + ALT++G++++ G  +YG+LG   +T +  P  ++  + HR I+ +ACGS  
Sbjct: 20  IACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ-VACGSRD 78

Query: 583 IAVVSSKSE--VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
              ++   E  V++WG G  G+LG G +E    P  +E L  + V  + CG+ F+ A+
Sbjct: 79  AQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 136



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 1/80 (1%)

Query: 561 PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           P  IE  +K + I DIACGS H A ++S  E+YTWG G  G+LGHGDN  +  P +V+ L
Sbjct: 6   PRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL 64

Query: 621 RDKQVKSVVCGSNFTAAICL 640
              +V  V CGS     + L
Sbjct: 65  LGHRVIQVACGSRDAQTLAL 84



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 10/114 (8%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G V+ WG+G  + L  G+ + V      RR    P+ ++        +IA GS H V  T
Sbjct: 1021 GAVYTWGKGDYHRLGHGSDDHV------RR----PRQVQGLQGKKVIAIATGSLHCVCCT 1070

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
            + G++++WG+   G+LG G    +  P+L+ AL G  ++ VACG  HT A + S
Sbjct: 1071 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 1124


>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Gorilla gorilla gorilla]
          Length = 979

 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 166/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL+G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
            +IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 155/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      I  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+ +            + ++F WG 
Sbjct: 116 LGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTEIACGRQHTSAF 309



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      +I  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRIRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  ++  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++L+S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|47212900|emb|CAF90790.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 2131

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/432 (29%), Positives = 204/432 (47%), Gaps = 79/432 (18%)

Query: 254  DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
            DVF+WG G  +G L  A           R+ L+P    S     AQ + CG     ++  
Sbjct: 1123 DVFLWGAGR-HGQLAEA----------GRNILVPTTAPS--FSQAQQVVCGQNCTFVIQP 1169

Query: 314  QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
             G + + GEGS G+LG G   D+    +I AL G  +   + +CG + H+ A+T SG+++
Sbjct: 1170 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 1229

Query: 371  TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI----------SSIC----------- 409
            +WGDG  + G LG  +      PR++   ++G ++          + +C           
Sbjct: 1230 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQ 1286

Query: 410  --CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK---TVMASCGV 464
              CG  H+A +T+ GKLFTFG+G +G LG G+ S+  +P  V  L+  +       +CG+
Sbjct: 1287 MSCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGQVANVACGL 1346

Query: 465  WHTAAIVEVAGKTSGSNGLSSKKLFTW--GDGAEGQLGHGDAEPRVVP-----------L 511
             HT  +             S+  +  W  GDG  G+LG G++  +  P           L
Sbjct: 1347 NHTLVV-------------SADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTL 1393

Query: 512  CVKVSDD----ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIE-- 565
            C ++  D    IS  KVACG   ++ALT  G+VF+ G      +G P S  +   R +  
Sbjct: 1394 CQELKVDVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRL--IGLPESRARNHNRPQQL 1451

Query: 566  GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQV 625
              +   +++D+A G+ H   +SS  +VY WG  + GQLG G   + + PT+V  L+ K +
Sbjct: 1452 PALSGVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVTMLQGKHI 1511

Query: 626  KSVVCGSNFTAA 637
              V  G   +AA
Sbjct: 1512 HQVSAGRCHSAA 1523



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 155/370 (41%), Gaps = 69/370 (18%)

Query: 317  IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            +F WG G  G+L   G  +    + P        S    V CG+  T  +  +G +   G
Sbjct: 1124 VFLWGAGRHGQLAEAGRNILVPTTAPSF------SQAQQVVCGQNCTFVIQPNGTVLACG 1177

Query: 374  DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
            +G +  G LGQ +     +   +S  ++G    Q+ + C    H+ A+T +G++F++GDG
Sbjct: 1178 EGSY--GRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 1234

Query: 431  TFGALGHGDRSSTSVPREVETLKELKTVMA-----------------------SCGVWHT 467
             +G LGHG+      PR++E L+  + V                         SCG  H+
Sbjct: 1235 DYGKLGHGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLCRCRSHLHLRLQMSCGFKHS 1294

Query: 468  AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF---CKV 524
            A +             +  KLFT+G+G  G+LG G+   + +P  V   +         V
Sbjct: 1295 AVVT------------ADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGQVANV 1342

Query: 525  ACGHSITIALTATGQ-VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHR------------ 571
            ACG + T+ ++A G  V++ G  DYG+LG   ST K   ++   I               
Sbjct: 1343 ACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVILQSPTLCQELKVDVL 1402

Query: 572  ---YIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSV 628
                I+ +ACG+     ++    V+T+G+     L      N   P  + AL    V+ V
Sbjct: 1403 CGISIKKVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNHNRPQQLPALSGVHVQDV 1462

Query: 629  VCGSNFTAAI 638
              G+  T A+
Sbjct: 1463 AVGAEHTLAL 1472



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 145/337 (43%), Gaps = 87/337 (25%)

Query: 302  ACGSK-HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG------------- 347
            +CGS  H++ +T+ G++FSWG+G  GKLGHG       P+ I+AL G             
Sbjct: 1212 SCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQVGRGRAAG 1271

Query: 348  -------SNIHM---VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
                   S++H+   ++CG  H+  VT  G L+T+G+G  + G LG  +  +  +P +V+
Sbjct: 1272 AGLCRCRSHLHLRLQMSCGFKHSAVVTADGKLFTFGNG--DYGRLGLGNTSNKKLPERVA 1329

Query: 398  GQMEGLQI---SSICCGPWHTAAITSAGKL-FTFGDGTFGALGHGDRSSTSVPR------ 447
              +EG QI   +++ CG  HT  +++ G + + FGDG +G LG G+ ++ S P+      
Sbjct: 1330 A-LEGYQIGQVANVACGLNHTLVVSADGMMVWAFGDGDYGKLGLGNSTAKSSPQVWAVIL 1388

Query: 448  ---------EVETLKELKTVMASCGVWHTAAIV--------------------------- 471
                     +V+ L  +     +CG   + A+                            
Sbjct: 1389 QSPTLCQELKVDVLCGISIKKVACGTQFSVALTKDGRVFTFGQDRLIGLPESRARNHNRP 1448

Query: 472  ------------EVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
                        +VA     +  LSS   ++ WG  +EGQLG G       P  V +   
Sbjct: 1449 QQLPALSGVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVTMLQG 1508

Query: 519  ISFCKVACGHSITIALTATG-QVFSMGSADYGQLGSP 554
                +V+ G   + A TA      + GS+   QLG P
Sbjct: 1509 KHIHQVSAGRCHSAAWTAPSLPPRAPGSSVPLQLGLP 1545



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 12/158 (7%)

Query: 488  LFTWGDGAEGQL---GHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            +F WG G  GQL   G     P   P   +        +V CG + T  +   G V + G
Sbjct: 1124 VFLWGAGRHGQLAEAGRNILVPTTAPSFSQAQ------QVVCGQNCTFVIQPNGTVLACG 1177

Query: 545  SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDI--ACGSY-HIAVVSSKSEVYTWGKGANG 601
               YG+LG   S       +   ++   +  +  +CGS  H   ++   EV++WG G  G
Sbjct: 1178 EGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYG 1237

Query: 602  QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            +LGHG+++ ++ P  +EAL+ ++V  V  G    A +C
Sbjct: 1238 KLGHGNSDRQRRPRQIEALQGEEVVQVGRGRAAGAGLC 1275



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 43/78 (55%)

Query: 287  PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
            P+ L +   +  Q +A G++H + ++  G +++WG  S G+LG G    V  P ++  L 
Sbjct: 1448 PQQLPALSGVHVQDVAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTVVTMLQ 1507

Query: 347  GSNIHMVACGEFHTCAVT 364
            G +IH V+ G  H+ A T
Sbjct: 1508 GKHIHQVSAGRCHSAAWT 1525


>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
 gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
 gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
          Length = 1057

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 166/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL+G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
            +IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 155/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+ +            + ++F WG 
Sbjct: 116 LGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTEIACGRQHTSAF 309



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  ++  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++L+S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Gorilla gorilla gorilla]
          Length = 1057

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 166/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL+G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
            +IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 155/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      I  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+ +            + ++F WG 
Sbjct: 116 LGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTEIACGRQHTSAF 309



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      +I  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRIRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  ++  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++L+S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Gorilla gorilla gorilla]
          Length = 1049

 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 166/346 (47%), Gaps = 20/346 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL+G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
            +IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+
Sbjct: 297 TEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 155/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      I  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+ +            + ++F WG 
Sbjct: 116 LGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTEIACGRQHTSAF 309



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      +I  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRIRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  ++  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++L+S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
           [Pan troglodytes]
          Length = 979

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL+G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 155/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+ +            + ++F WG 
Sbjct: 116 LGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 132/283 (46%), Gaps = 34/283 (12%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDA 344
           +P+ ++S   +    +ACG  H++ ++K  ++F WG+   G+LG G +    + P+L+ +
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS 186

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           L G     VA G  H+  +TLSG ++ WG   +  G LG   E   ++P  +   +   +
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGR--NKFGQLGLNDENDRYVPNLLKS-LRSQK 243

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           I  ICCG  HTAA+T  G +FTFG G +G LGH   S    PR+V  L        +CG 
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGR 303

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK---------V 515
            HT+A V            SS +++++G G  GQLG G    R  P  VK          
Sbjct: 304 QHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQC 352

Query: 516 SDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG 558
             DI + +  C            ++FS G   +    SP + G
Sbjct: 353 LPDIDYEEYFC----------VKRIFSGGDQSFSHYSSPQNCG 385



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  ++  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++L+S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Pan paniscus]
          Length = 979

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL+G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 155/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+ +            + ++F WG 
Sbjct: 116 LGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  ++  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++L+S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
          Length = 1054

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 174/367 (47%), Gaps = 30/367 (8%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           +F WG  + +G LG  + G+E       +   P+ +      + + IACG  + + VTK+
Sbjct: 1   MFCWGSTI-HGELG--LGGIE-----DENIFTPREVNFEKANEIEQIACGDNYTIAVTKE 52

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           GQ++S G    G+LG   E      +LI  ++       ACG  HT  V   G L++WG 
Sbjct: 53  GQVYSCGNNDHGQLGQ--EKGRKRLQLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGS 110

Query: 375 GIHNLGLLGQVSEISHWI--PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            +   G LG +  +S  I  PR V      + I  I CG  H+ A+T+ G+L+ +G  + 
Sbjct: 111 NVE--GQLG-LDRVSATIREPRMVKTLGTKI-IVQIACGLKHSIALTNNGELYAWGSNSD 166

Query: 433 GALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           G LG G  +   + P+ V +L  +     +CG +HT  I +            S  +F W
Sbjct: 167 GQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISK------------SGAVFAW 214

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           G    GQLG  D + R VP  ++   +   C  ACG   ++ LT  G VF+ G+  YGQL
Sbjct: 215 GRNTFGQLGLSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQL 274

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           G    T +   R    +    +  I+CG  H +A+V S+  VY WG G  GQLG+   +N
Sbjct: 275 GHGNKTSEILPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLGNRIAQN 334

Query: 611 KQTPTLV 617
             TP +V
Sbjct: 335 STTPQVV 341



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 161/333 (48%), Gaps = 25/333 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +F WG    G+LG G   + ++  P+ ++    + I  +ACG+ +T AVT  G +Y+ G+
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGN 60

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             H  G LGQ  E      + +SG ++ L      CG  HT  +   G+LF++G    G 
Sbjct: 61  NDH--GQLGQ--EKGRKRLQLISG-IDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQ 115

Query: 435 LGHGDRSSTSV--PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           LG  DR S ++  PR V+TL     V  +CG+ H+ A+         +NG    +L+ WG
Sbjct: 116 LGL-DRVSATIREPRMVKTLGTKIIVQIACGLKHSIALT--------NNG----ELYAWG 162

Query: 493 DGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
             ++GQLG G D +  + P  V     +    VACG   TI ++ +G VF+ G   +GQL
Sbjct: 163 SNSDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQL 222

Query: 552 G-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           G S       P ++   +++  +   ACG      ++    V+T G G  GQLGHG+  +
Sbjct: 223 GLSDIQNRNVPCQLR-TLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTS 281

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
           +  P  +  L    V  + CG   T A+   +G
Sbjct: 282 EILPRQIMELMGSTVTQISCGRRHTLALVPSRG 314



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 133/279 (47%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           ++ WG  IH    LG + + + + PR+V+ + +  +I  I CG  +T A+T  G++++ G
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFTPREVNFE-KANEIEQIACGDNYTIAVTKEGQVYSCG 59

Query: 429 DGTFGALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           +   G LG    R    +   ++ L   K   A+CG  HT  + E              +
Sbjct: 60  NNDHGQLGQEKGRKRLQLISGIDPLAFRK---AACGSSHTLVVNEWG------------Q 104

Query: 488 LFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           LF+WG   EGQLG       +  P  VK        ++ACG   +IALT  G++++ GS 
Sbjct: 105 LFSWGSNVEGQLGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTNNGELYAWGSN 164

Query: 547 DYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
             GQLG    T  +   ++  ++    I  +ACG YH  V+S    V+ WG+   GQLG 
Sbjct: 165 SDGQLGLGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D +N+  P  +  LR+ +V    CG  F+  + +  GV
Sbjct: 225 SDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTMDGGV 263



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 105/198 (53%), Gaps = 13/198 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+++ WG    +G LG          +D +  L PK++ S   +    +ACG  H ++++
Sbjct: 156 GELYAWGSN-SDGQLG--------LGSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVIS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K G +F+WG  + G+LG     + + P  +  L  S +   ACGE  +  +T+ G ++T 
Sbjct: 207 KSGAVFAWGRNTFGQLGLSDIQNRNVPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTC 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGT 431
           G G++  G LG  ++ S  +PR++  ++ G  ++ I CG  HT A+  S G+++ +G G 
Sbjct: 267 GAGMY--GQLGHGNKTSEILPRQIM-ELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGG 323

Query: 432 FGALGHGDRSSTSVPREV 449
            G LG+    +++ P+ V
Sbjct: 324 AGQLGNRIAQNSTTPQVV 341


>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pan paniscus]
 gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL+G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 155/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+ +            + ++F WG 
Sbjct: 116 LGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  ++  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++L+S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Pan troglodytes]
 gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL+G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 155/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+ +            + ++F WG 
Sbjct: 116 LGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 132/283 (46%), Gaps = 34/283 (12%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDA 344
           +P+ ++S   +    +ACG  H++ ++K  ++F WG+   G+LG G +    + P+L+ +
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS 186

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           L G     VA G  H+  +TLSG ++ WG   +  G LG   E   ++P  +   +   +
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGR--NKFGQLGLNDENDRYVPNLLKS-LRSQK 243

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           I  ICCG  HTAA+T  G +FTFG G +G LGH   S    PR+V  L        +CG 
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGR 303

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK---------V 515
            HT+A V            SS +++++G G  GQLG G    R  P  VK          
Sbjct: 304 QHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQC 352

Query: 516 SDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG 558
             DI + +  C            ++FS G   +    SP + G
Sbjct: 353 LPDIDYEEYFC----------VKRIFSGGDQSFSHYSSPQNCG 385



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  ++  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++L+S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pan paniscus]
 gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL+G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 155/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+ +            + ++F WG 
Sbjct: 116 LGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  ++  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++L+S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
           [Pan troglodytes]
 gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 165/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL+G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 155/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+ +            + ++F WG 
Sbjct: 116 LGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 132/283 (46%), Gaps = 34/283 (12%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDA 344
           +P+ ++S   +    +ACG  H++ ++K  ++F WG+   G+LG G +    + P+L+ +
Sbjct: 127 VPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKS 186

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           L G     VA G  H+  +TLSG ++ WG   +  G LG   E   ++P  +   +   +
Sbjct: 187 LLGIPFMQVAAGGAHSFVLTLSGAIFGWGR--NKFGQLGLNDENDRYVPNLLKS-LRSQK 243

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           I  ICCG  HTAA+T  G +FTFG G +G LGH   S    PR+V  L        +CG 
Sbjct: 244 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGR 303

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK---------V 515
            HT+A V            SS +++++G G  GQLG G    R  P  VK          
Sbjct: 304 QHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWYPYNGQC 352

Query: 516 SDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG 558
             DI + +  C            ++FS G   +    SP + G
Sbjct: 353 LPDIDYEEYFC----------VKRIFSGGDQSFSHYSSPQNCG 385



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  ++  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++L+S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
           magnipapillata]
          Length = 725

 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 178/349 (51%), Gaps = 25/349 (7%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           +ACG +H+ +VT+ G+++ +G    G+LG G    ++ P  +  L    +  VACG  HT
Sbjct: 43  MACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGRNHT 102

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
              + SG L+++  G +  G LG V + +  +P+++   +  ++I  I CG +H+  ++ 
Sbjct: 103 IVYSESGKLFSF--GCNEDGQLGHVDKENELLPKEIES-IPQMEIKQIACGTYHSIILSE 159

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            G ++ +G+   G LG G+    S+P++++  KE+  V  SCG +HTA +          
Sbjct: 160 DGDVYVWGNNNEGQLGLGEEVENSLPKKLKFKKEV--VSVSCGYYHTALVTR-------- 209

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAE--PRVVPLCVKV-SDDISFCKVACGHSITIALTAT 537
           +G     L+T+G+   G+LG   ++     VP  V + +D+  +  V+CG   T+A+T  
Sbjct: 210 DGF----LYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQ 265

Query: 538 GQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
           G  ++ G    GQLG      +   P +I+     + I  ++CG  H AVV+   +V+T+
Sbjct: 266 GHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQKCIS-VSCGESHTAVVTESGKVFTF 324

Query: 596 GKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHK 642
           G G +G+LG G++   N   P  +       V  V CG   T  + +HK
Sbjct: 325 GDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLVLAVHK 373



 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 151/296 (51%), Gaps = 23/296 (7%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H ++ ++ G++FS+G    G+LGH  + +   PK I+++    I  +ACG 
Sbjct: 92  VRKVACGRNHTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGT 151

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           +H+  ++  GD+Y WG+  +N G LG   E+ + +P+K+  + E   + S+ CG +HTA 
Sbjct: 152 YHSIILSEDGDVYVWGN--NNEGQLGLGEEVENSLPKKLKFKKE---VVSVSCGYYHTAL 206

Query: 418 ITSAGKLFTFGDGTFGALG--HGDRSSTSVPREVETLKEL-KTVMASCGVWHTAAIVEVA 474
           +T  G L+TFG+   G LG      S+T+VP+ V    +  + +  SCG  HT AI +  
Sbjct: 207 VTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQG 266

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIA 533
                         + WGDG++GQLGHG     V  P  +K         V+CG S T  
Sbjct: 267 ------------HCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAV 314

Query: 534 LTATGQVFSMGSADYGQL--GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
           +T +G+VF+ G   +G+L  G    +  F         +  +  ++CG  H  V++
Sbjct: 315 VTESGKVFTFGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLVLA 370



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 148/279 (53%), Gaps = 27/279 (9%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           ++   D+ + LLPK +ES   ++ + IACG+ H++++++ G ++ WG  + G+LG G E 
Sbjct: 121 QLGHVDKENELLPKEIESIPQMEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLGLGEEV 180

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLG----QVSEISH 390
           + S PK +       +  V+CG +HT  VT  G LYT+G+  + LG LG    Q+S  + 
Sbjct: 181 ENSLPKKLKF--KKEVVSVSCGYYHTALVTRDGFLYTFGE--NELGKLGLSSSQLSNTT- 235

Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR-SSTSVPREV 449
            +P+ V+   +  +  S+ CG  HT AIT  G  + +GDG+ G LGHG +    + P+++
Sbjct: 236 -VPQSVAMPADNDEYISVSCGARHTVAITKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQI 294

Query: 450 ETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA--EPR 507
           + L   K +  SCG  HTA + E            S K+FT+GDG  G+LG G+      
Sbjct: 295 KKLSGQKCISVSCGESHTAVVTE------------SGKVFTFGDGRHGKLGQGEDSFSNS 342

Query: 508 VVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMG 544
             P+ +   +  +   V+CG  H++ +A+      F  G
Sbjct: 343 FDPVYLSRFNYFNVVYVSCGGCHTLVLAVHKNKDDFVDG 381



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 116/238 (48%), Gaps = 19/238 (7%)

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +  + CG  H+A +T +G+L+ FG   +G LG G   S + P  V+ LK  K    +CG 
Sbjct: 40  VVEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGR 99

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
            HT    E            S KLF++G   +GQLGH D E  ++P  ++    +   ++
Sbjct: 100 NHTIVYSE------------SGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQI 147

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHI 583
           ACG   +I L+  G V+  G+ + GQLG         P +++     + +  ++CG YH 
Sbjct: 148 ACGTYHSIILSEDGDVYVWGNNNEGQLGLGEEVENSLPKKLKF---KKEVVSVSCGYYHT 204

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNE--NKQTPTLVEALRDK-QVKSVVCGSNFTAAI 638
           A+V+    +YT+G+   G+LG   ++  N   P  V    D  +  SV CG+  T AI
Sbjct: 205 ALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAI 262



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 98/222 (44%), Gaps = 26/222 (11%)

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           I   G +FTFG   F      D  +         +K    V  +CG  H+A + E     
Sbjct: 11  IPDLGAVFTFGKSKFA-----DNIANKF-----WIKNDGVVEMACGDEHSAVVTE----- 55

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
                  S +L+ +G    GQLG G  +    P  VK        KVACG + TI  + +
Sbjct: 56  -------SGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGRNHTIVYSES 108

Query: 538 GQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           G++FS G  + GQLG      +  P  IE  I    I+ IACG+YH  ++S   +VY WG
Sbjct: 109 GKLFSFGCNEDGQLGHVDKENELLPKEIES-IPQMEIKQIACGTYHSIILSEDGDVYVWG 167

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               GQLG G+      P  ++    K+V SV CG   TA +
Sbjct: 168 NNNEGQLGLGEEVENSLPKKLKF--KKEVVSVSCGYYHTALV 207



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 11/129 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  + WG+G   G LG     +E++         PK ++        S++CG  H  +VT
Sbjct: 266 GHCYAWGDG-SQGQLGHGTKLLEVNE--------PKQIKKLSGQKCISVSCGESHTAVVT 316

Query: 313 KQGQIFSWGEGSGGKLGHGVE--ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           + G++F++G+G  GKLG G +  ++   P  +   N  N+  V+CG  HT  + +  +  
Sbjct: 317 ESGKVFTFGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLVLAVHKNKD 376

Query: 371 TWGDGIHNL 379
            + DG ++L
Sbjct: 377 DFVDGENSL 385


>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
          Length = 1027

 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 166/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL+G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHIA-VVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
            +IACG  H +  V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 154/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+ +            + ++F WG 
Sbjct: 116 LGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T+  
Sbjct: 284 NPRKVFELMGSIVTEIACGRQHTSTF 309



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 142/284 (50%), Gaps = 22/284 (7%)

Query: 291 ESTVVLDAQSI---ACGSKHAVLVTKQGQIFSWGEGSGGKLGH-GVEADVSYPKLIDALN 346
           E  V LDAQ+I   +CG  H + +  +GQ+++WG  S G+LG  G E  +  P+ I +L+
Sbjct: 76  EQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLS 135

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
              I  VACG +H+ A++ + +++ WG   +  G LG  ++       ++   + G+   
Sbjct: 136 DIQIVQVACGYYHSLALSKASEVFCWGQ--NKYGQLGLGTDCKKQTSPQLLKSLLGIPFM 193

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            +  G  H+  +T +G +F +G   FG LG  D +   VP  +++L+  K V   CG  H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           TAA+ +  G            +FT+G G  GQLGH      + P  V         ++AC
Sbjct: 254 TAALTKEGG------------VFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTEIAC 301

Query: 527 GHSITIALT-ATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGN 567
           G   T     ++G+++S G    GQLG+ GST   K P  ++GN
Sbjct: 302 GRQHTSTFVPSSGRIYSFGLGGNGQLGT-GSTSNRKSPFTVKGN 344



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  ++  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 99/198 (50%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG           D +    P++L+S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+  + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
          Length = 958

 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)

Query: 251 GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
           G G ++ WG     G LGG + G ++         +P   E+   L    +  G +    
Sbjct: 221 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 270

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
           VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  G+
Sbjct: 271 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 330

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T+G
Sbjct: 331 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 387

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
            G +G LGH D      P+ VE L+  + +  +CG          +G            +
Sbjct: 388 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG----------SGDAQTLCLTDDDTV 437

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           ++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  DY
Sbjct: 438 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 497

Query: 549 GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG G
Sbjct: 498 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 555

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                Q P LV AL+ K+V  V CGS  T A
Sbjct: 556 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 586



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366 SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
           SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 222 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 277

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 278 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 326

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
            S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 327 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 385

Query: 543 MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
            G   YG+LG   S  +  P  +E    HR I DIACGS       ++    V++WG G 
Sbjct: 386 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI-DIACGSGDAQTLCLTDDDTVWSWGDGD 444

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 445 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 483



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 112/228 (49%), Gaps = 14/228 (6%)

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           T +   +G ++ +G    G LG  + +   VP   E L  L+ V              + 
Sbjct: 216 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IG 263

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITI 532
           G+ +     +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +
Sbjct: 264 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCL 323

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
           AL++ G+V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++
Sbjct: 324 ALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDL 383

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           YTWGKG  G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 384 YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 431



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 10/114 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G  + L  G+ + V      RR    P+ ++        +IA GS H V  T
Sbjct: 487 GAVYTWGKGDYHRLGHGSDDHV------RR----PRQVQGLQGKKVIAIATGSLHCVCCT 536

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
           + G++++WG+   G+LG G    +  P+L+ AL G  ++ VACG  HT A + S
Sbjct: 537 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 590


>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
          Length = 928

 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 164/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  V    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G +    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 155/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+ +            + ++F WG 
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G + + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+  +    LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRK-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIECQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.3 bits (238), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 102/198 (51%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  +   + +S        P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIECQKQTS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
          Length = 546

 Score =  159 bits (403), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 164/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  V    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G +    + P+ +++L 
Sbjct: 130 NIK-SLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 155/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHGV--EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+ + +            ++F WG 
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKAS------------EVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G + + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+  +    LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRK-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIECQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 102/198 (51%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  +   + +S        P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIECQKQTS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
          Length = 1057

 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 163/346 (47%), Gaps = 20/346 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  V    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  VACGE HT A+   G +Y WG D    LGL G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
              ACG  H  A V S   +Y++G G NGQLG G   N+++P  V+
Sbjct: 297 TQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 154/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+ +            + ++F WG 
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V    CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTQAACGRQHTSAF 309



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 141/284 (49%), Gaps = 22/284 (7%)

Query: 291 ESTVVLDAQSI---ACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVEADVSYPKLIDALN 346
           E  V LDAQ+I   ACG  H + +  +GQ+++WG  S G+LG  G E  +  P+ I +L+
Sbjct: 76  EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS 135

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
              I  VACG +H+ A++ + +++ WG   +  G LG   +       ++   + G+   
Sbjct: 136 DIQIVQVACGYYHSLALSKASEVFCWGQ--NKYGQLGLGIDCQKQTSPQLIKSLLGIPFM 193

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            +  G  H+  +T +G +F +G   FG LG  D +   VP  +++L+  K V   CG  H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           TAA+ +  G            +FT+G G  GQLGH      + P  V         + AC
Sbjct: 254 TAALTKEGG------------VFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQAAC 301

Query: 527 GHSITIALT-ATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGN 567
           G   T A   ++G+++S G    GQLG+ GST   K P  ++GN
Sbjct: 302 GRQHTSAFVPSSGRIYSFGLGGNGQLGT-GSTSNRKSPFTVKGN 344



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+  +    LG + E     PR+ S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRR-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  +CG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIDCQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 102/198 (51%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIDCQKQTS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++   CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|449676621|ref|XP_004208667.1| PREDICTED: uncharacterized protein LOC101237479, partial [Hydra
           magnipapillata]
          Length = 896

 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 176/357 (49%), Gaps = 38/357 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMV--ACGEF 358
           IACG  H   VT   ++++WG+  GG+  +    +   P  ++ L+   I +V  ACGEF
Sbjct: 450 IACGRNHIAFVTNNKELYTWGKECGGRKDN--VQNTCLPMRMENLHNQGIQVVSVACGEF 507

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
           HT A+   G +Y+WG   +  G LG     + + P  ++  +   QI S+ CG +HT AI
Sbjct: 508 HTIALCEEG-VYSWGS--NEYGQLGVGDTRTRYRPVLIT-HISSKQIVSVVCGAYHTLAI 563

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           TS  K++++G G  G LG     +   P++++ L   K + A+ G  H+A +        
Sbjct: 564 TSDYKVYSWGWGVHGQLGLKSVENQLTPKQIDLLDSHKVIQAAAGYAHSAVLT------- 616

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
                S + ++T+G    GQLG G    +V+P  V      S   ++CG   TIA++   
Sbjct: 617 -----SQRYVYTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSIYLISCGPFETIAISEDQ 671

Query: 539 QVFSMGSADYGQ--LGSPGSTGKFPTRIEGNIK---HRY------------IEDIACGSY 581
            +F  G  +Y Q  + +   + K+  ++  N K   HR+            I  I CG++
Sbjct: 672 TIFCWGR-NYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQHPITQIFCGNW 730

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           H  +++S ++VYTWG    GQLGH +  ++  P LV+AL  + +  V  G+ F+ A 
Sbjct: 731 HYIILTSVNQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAIIGVAVGAEFSVAF 787



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 141/311 (45%), Gaps = 12/311 (3%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           S+ACG  H + + ++G ++SWG    G+LG G       P LI  ++   I  V CG +H
Sbjct: 501 SVACGEFHTIALCEEG-VYSWGSNEYGQLGVGDTRTRYRPVLITHISSKQIVSVVCGAYH 559

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           T A+T    +Y+WG G+H  G LG  S  +   P+++   ++  ++     G  H+A +T
Sbjct: 560 TLAITSDYKVYSWGWGVH--GQLGLKSVENQLTPKQID-LLDSHKVIQAAAGYAHSAVLT 616

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
           S   ++TFG   +G LG G      +P+ V++L      + SCG + T AI E   +T  
Sbjct: 617 SQRYVYTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSIYLISCGPFETIAISE--DQTIF 674

Query: 480 SNGLSSKKLFTWGDGAEGQLGH------GDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
             G +  + +        + G        D   R  P  ++        ++ CG+   I 
Sbjct: 675 CWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETLQFQLQHPITQIFCGNWHYII 734

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
           LT+  QV++ G  D GQLG      +   R+   +  R I  +A G+       +   + 
Sbjct: 735 LTSVNQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAIIGVAVGAEFSVAFDADDNIM 794

Query: 594 TWGKGANGQLG 604
            WG+   G++G
Sbjct: 795 AWGRNDEGKIG 805



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 120/295 (40%), Gaps = 33/295 (11%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVE 333
           ++   D R    P ++         S+ CG+ H + +T   +++SWG G  G+LG   VE
Sbjct: 527 QLGVGDTRTRYRPVLITHISSKQIVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVE 586

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
             ++ PK ID L+   +   A G  H+  +T    +YT+G  ++  G LG  S     IP
Sbjct: 587 NQLT-PKQIDLLDSHKVIQAAAGYAHSAVLTSQRYVYTFGADLY--GQLGIGSHYKQVIP 643

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD----------------GTFGALGH 437
           + V   +    I  I CGP+ T AI+    +F +G                 G   A   
Sbjct: 644 QLVDS-LTLDSIYLISCGPFETIAISEDQTIFCWGRNYHQFYICAKAESSKYGRKMASNT 702

Query: 438 GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEG 497
            D +    P  ++   +       CG WH   +  V             +++TWG    G
Sbjct: 703 KDLNHRFYPETLQFQLQHPITQIFCGNWHYIILTSV------------NQVYTWGYNDCG 750

Query: 498 QLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
           QLGH +   +  P  VK     +   VA G   ++A  A   + + G  D G++G
Sbjct: 751 QLGHYNKIDQSAPRLVKALIRRAIIGVAVGAEFSVAFDADDNIMAWGRNDEGKIG 805



 Score = 56.6 bits (135), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 6/116 (5%)

Query: 277 SSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV 336
           ++ D      P+ L+  +      I CG+ H +++T   Q+++WG    G+LGH  + D 
Sbjct: 701 NTKDLNHRFYPETLQFQLQHPITQIFCGNWHYIILTSVNQVYTWGYNDCGQLGHYNKIDQ 760

Query: 337 SYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD------GIHNLGLLGQVS 386
           S P+L+ AL    I  VA G   + A     ++  WG       GI N G LG  S
Sbjct: 761 SAPRLVKALIRRAIIGVAVGAEFSVAFDADDNIMAWGRNDEGKIGIENEGNLGNSS 816


>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
          Length = 1049

 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 164/346 (47%), Gaps = 20/346 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  V    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G +    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 155/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+ +            + ++F WG 
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G + + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+  +    LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRK-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIECQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 102/198 (51%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  +   + +S        P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIECQKQTS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|118353390|ref|XP_001009963.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89291730|gb|EAR89718.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 1166

 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 188/393 (47%), Gaps = 47/393 (11%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           V++WG     G LG A      S    +    P+    +VV++   IACG +H   + + 
Sbjct: 36  VYVWGSDTY-GQLGLA------SREFGKSCPSPRFTSFSVVIE--DIACGEEHTSFIAQN 86

Query: 315 GQIFSWGEGSGGKLGHGVEADVSY----PKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           G ++S G  + G+LG  V  D SY    P L++ L G     ++CG +HT  V  +G L+
Sbjct: 87  GYVYSMGNNNQGQLG--VSVDESYYKSAPTLVEGLKGYKAVQISCGAYHTATVCDNGQLF 144

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           TWG      G LG     +   P+ V   ++      + CG  +T  IT   K+F FGDG
Sbjct: 145 TWGQNCE--GQLGIGKSDNMTTPQIVD--LKNNLAVFVSCGKRNTMVITQTQKIFGFGDG 200

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
             G LG G+  +   PR+++   +++ ++A SCG  HT  + E              + F
Sbjct: 201 KCGQLGLGNECNEYKPRQLQI--QMQNIVAISCGDRHTLFLNEEG------------EAF 246

Query: 490 TWGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHS-ITIALTATGQVFSMGSAD 547
           + G+    QLG   +++   +P+ VK    + F KV   ++ ++ AL++ G ++  G+  
Sbjct: 247 SCGNNTYNQLGCANNSQSSNIPVKVKQKSTLKFVKVIAANTPMSAALSSEGYLYLWGTGF 306

Query: 548 YGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
           +GQ   P       TR E   K   + DI  G+  I ++  + +VY+WG    G+LG G 
Sbjct: 307 FGQFDRP-------TRCEFAPKD--LLDICIGNQFICLLDGEGKVYSWGSNMFGELGQGI 357

Query: 608 NENKQT--PTLVEALRDKQVKSVVCGSNFTAAI 638
              +Q   P  V+ ++DK VK + CG+NF  A+
Sbjct: 358 ANGQQALEPIQVDKIKDKNVKRLYCGANFVFAM 390


>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
 gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
          Length = 1057

 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 164/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  V    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++ A ++F +G   +G LG G +    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 155/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+ +            + ++F WG 
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G + + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 130/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+  +    LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVLEPRK-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGIECQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 102/198 (51%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  +   + +S        P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFCWGQN-KYGQLGLGIECQKQTS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342


>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 388

 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 121/374 (32%), Positives = 187/374 (50%), Gaps = 38/374 (10%)

Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPK 340
           +D   P++L    +    S+ACG  H + +T  G+  SWG G+ G+LGHG V ++  YPK
Sbjct: 37  QDEHFPQLLHQFSLSSISSLACGGAHVIALTSAGKALSWGRGNSGQLGHGEVVSNTLYPK 96

Query: 341 LIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM 400
            + +L+G  I  V+ G  H+  V+ +G ++T GDG  + G LG     SH  P KVS  +
Sbjct: 97  AVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCGDG--SFGQLGHGDNASHCSPVKVSCFV 154

Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG-HGDR-SSTSVPREVETLKELKTV 458
           + L ++ + CG  H+  +    +++ FG G  G LG   DR  S +VP+ V   + ++ V
Sbjct: 155 D-LHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVEIV 213

Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
             +    H+AA V V G            ++TWG G +G       E   VP C+  S  
Sbjct: 214 GTAANGDHSAA-VSVDG-----------HVYTWGRGFKG------FEDAHVPQCLNSS-- 253

Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYG---QLGSPGSTGKFPTRIEGNIKH----- 570
           ++F KVA G +  +A++  G+V+ +G    G    L + G    FP   E N++      
Sbjct: 254 LNFTKVALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNIGPAKHFPDLREFNLEKVPGLD 313

Query: 571 -RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA---LRDKQVK 626
              I DIA G+ H  +V+   E+ TWG G +GQLG GD  ++ +P  V     L +    
Sbjct: 314 GTKITDIAAGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRDQTSPVTVSLDYDLNEAASI 373

Query: 627 SVVCGSNFTAAICL 640
            V CGS FT A+ +
Sbjct: 374 RVFCGSGFTFAVTM 387



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 86/184 (46%), Gaps = 7/184 (3%)

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
           S +++++WG G EGQLG    +    P  +      S   +ACG +  IALT+ G+  S 
Sbjct: 16  SEQRVWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSAGKALSW 75

Query: 544 GSADYGQLGSPG--STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           G  + GQLG     S   +P  +  ++   +I  ++ G  H   VS    V+T G G+ G
Sbjct: 76  GRGNSGQLGHGEVVSNTLYPKAVT-SLDGYFITHVSAGWSHSGFVSDTGFVFTCGDGSFG 134

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           QLGHGDN +  +P  V    D  V  V CG     ++ L KG  +  +   SG R Q   
Sbjct: 135 QLGHGDNASHCSPVKVSCFVDLHVAQVACG--MRHSLVLLKGNQV--YGFGSGKRGQLGV 190

Query: 662 RRRR 665
              R
Sbjct: 191 SNDR 194



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 18/205 (8%)

Query: 230 RISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKV 289
           + SLSS  S +  G+        G    WG G  +G LG   +G  +S     + L PK 
Sbjct: 47  QFSLSSISSLACGGAHVIALTSAGKALSWGRG-NSGQLG---HGEVVS-----NTLYPKA 97

Query: 290 LESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN 349
           + S        ++ G  H+  V+  G +F+ G+GS G+LGHG  A    P  +      +
Sbjct: 98  VTSLDGYFITHVSAGWSHSGFVSDTGFVFTCGDGSFGQLGHGDNASHCSPVKVSCFVDLH 157

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLG----QVSEISHWIPRKVSGQMEGLQI 405
           +  VACG  H+  +     +Y +G G    G LG    +V  ++  +P+ VSG  EG++I
Sbjct: 158 VAQVACGMRHSLVLLKGNQVYGFGSG--KRGQLGVSNDRVKSVN--VPKVVSG-FEGVEI 212

Query: 406 SSICCGPWHTAAITSAGKLFTFGDG 430
                   H+AA++  G ++T+G G
Sbjct: 213 VGTAANGDHSAAVSVDGHVYTWGRG 237


>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pongo abelii]
          Length = 979

 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 164/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL+G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG  H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 154/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG  H+ A+ +            + ++F WG 
Sbjct: 116 LGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSK------------ASEVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  ++  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 103/210 (49%), Gaps = 14/210 (6%)

Query: 243 GSCHE-DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
           G CH        +VF WG+    G LG           D +    P++L+S + +    +
Sbjct: 145 GYCHSLALSKASEVFCWGQN-KYGQLG--------LGTDCKKQTSPQLLKSLLGIPFMQV 195

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G  H+ ++T  G IF WG    G+LG   E D   P L+ +L    I  + CGE HT 
Sbjct: 196 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTA 255

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITS 420
           A+T  G ++T+G G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPS 312

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
           +G++++FG G  G LG G  S+   P  V+
Sbjct: 313 SGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 13/171 (7%)

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK---VACGHSITIALTATGQVFSMG 544
           +  WG+ + GQLG G  +  +V L  + SD     K   V CG   T+ +   G V++ G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIV-LEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
             D GQLG   S  K P ++   +  + I  ++CG  H   ++ K +VY WG  ++GQLG
Sbjct: 60  CNDLGQLGHEKSRKK-PEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 605 H-GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSG 654
             G  E  + P  +++L D Q+  V CG       C    +S A    C G
Sbjct: 118 LVGSEECIRVPRNIKSLSDIQIVQVACGY------CHSLALSKASEVFCWG 162


>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
 gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
 gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
           II]
          Length = 487

 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 114/348 (32%), Positives = 176/348 (50%), Gaps = 30/348 (8%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CGS ++  +T  G +  WG G  G+LG G   D   P++   L+  N+  VAC + HT
Sbjct: 47  VSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRV--NLSLKNVIQVACSDRHT 104

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVS-EISHWI---PRKVSGQMEGLQISSICCGPWHTA 416
            A+  +G+LYTWG   +     GQ    IS+ +   P KV   +EG ++  + CG +HT 
Sbjct: 105 AAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKA-LEGEKVIQVSCGSYHTG 163

Query: 417 AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
            +T   K  T+G G  G LGHGD      P+ +E+L  L     SCG  HTA +      
Sbjct: 164 CLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAIL------ 217

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP-LCVKVSDDISFCKVACGHSITIALT 535
                 L + KL+ +G GA G+LG G  +  ++P L     +DI   KV+ G   + A+T
Sbjct: 218 ------LVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVT 271

Query: 536 ATGQVFSMGSADYGQLG----SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             G+V++ G    G+LG     P      P R+  N++  +I DI+CG+ H   +S   +
Sbjct: 272 KCGKVYTWGQG--GRLGHIFNGPEHDFLSPKRLS-NLEKAFIVDISCGNSHSVALSDVGD 328

Query: 592 VYTWGKGANGQLGHG-DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +YTWG   N  +GHG    +   P+    L++K +  VVC S+ + A+
Sbjct: 329 IYTWGMTKN--IGHGIQGIHPNMPSKHPILQNKNIVQVVCSSSHSIAL 374



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 168/365 (46%), Gaps = 44/365 (12%)

Query: 237 VSSSSQGSCHEDFDGL----GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLES 292
           +SS S+ SC  ++       GD+ +WG G G G LG           +  D L+P+V  +
Sbjct: 41  LSSISKVSCGSNYSAAITNSGDLILWGYG-GCGQLG---------FGNLEDCLVPRV--N 88

Query: 293 TVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG------VEADVSYPKLIDALN 346
             + +   +AC  +H   +   G++++WG    GKLGHG          VS P  + AL 
Sbjct: 89  LSLKNVIQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALE 148

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
           G  +  V+CG +HT  +T      TWG G+   G LG       + P+ +   + GL I 
Sbjct: 149 GEKVIQVSCGSYHTGCLTDDKKALTWGLGLQ--GRLGHGDTQDIFTPKLIE-SLAGLPIK 205

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE-TLKELKTVMASCGVW 465
            I CG  HTA +   GKL+ FG G FG LG G      +PR +E  L++++    S G  
Sbjct: 206 EISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQ 265

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH---GDAEPRVVPLCVKVSDDISFC 522
           H+AA+ +              K++TWG G  G+LGH   G     + P  +   +     
Sbjct: 266 HSAAVTKCG------------KVYTWGQG--GRLGHIFNGPEHDFLSPKRLSNLEKAFIV 311

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
            ++CG+S ++AL+  G +++ G       G  G     P++    ++++ I  + C S H
Sbjct: 312 DISCGNSHSVALSDVGDIYTWGMTKNIGHGIQGIHPNMPSK-HPILQNKNIVQVVCSSSH 370

Query: 583 IAVVS 587
              +S
Sbjct: 371 SIALS 375



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 143/294 (48%), Gaps = 28/294 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+++ WG    NG LG     + IS+      +  K LE   V+    ++CGS H   +T
Sbjct: 111 GELYTWGCS-KNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQ---VSCGSYHTGCLT 166

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
              +  +WG G  G+LGHG   D+  PKLI++L G  I  ++CG  HT  + ++G LY +
Sbjct: 167 DDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMF 226

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           G G    G LG  S     IPR + G +E +QI+ +  G  H+AA+T  GK++T+G G  
Sbjct: 227 GGGA--FGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG-- 282

Query: 433 GALGH---GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
           G LGH   G       P+ +  L++   V  SCG  H+ A+ +V              ++
Sbjct: 283 GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVG------------DIY 330

Query: 490 TWGDGAEGQLGHG--DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
           TW  G    +GHG     P  +P    +  + +  +V C  S +IAL+  G + 
Sbjct: 331 TW--GMTKNIGHGIQGIHPN-MPSKHPILQNKNIVQVVCSSSHSIALSDIGALV 381



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 125/253 (49%), Gaps = 21/253 (8%)

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
           P  V G      IS + CG  ++AAIT++G L  +G G  G LG G+     VPR   +L
Sbjct: 32  PHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSL 91

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV--- 509
           K +  +  +C   HTAAI            LS+ +L+TWG    G+LGHG  E  +    
Sbjct: 92  KNV--IQVACSDRHTAAI------------LSNGELYTWGCSKNGKLGHGQFELSISNNV 137

Query: 510 ---PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEG 566
              P+ VK  +     +V+CG   T  LT   +  + G    G+LG   +   F  ++  
Sbjct: 138 VSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIE 197

Query: 567 NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA-LRDKQV 625
           ++    I++I+CG +H A++    ++Y +G GA G+LG G  ++   P L+E  L D Q+
Sbjct: 198 SLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQI 257

Query: 626 KSVVCGSNFTAAI 638
             V  GS  +AA+
Sbjct: 258 TKVSLGSQHSAAV 270



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 35/231 (15%)

Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV-MASCGVWHTAAIVEVAGKTSGSNG 482
           +  +G   +G  G      +  P  V+ L+ L ++   SCG  ++AAI            
Sbjct: 10  VVVWGSTEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAIT----------- 58

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVP---LCVKVSDDISFCKVACGHSITIALTATGQ 539
            +S  L  WG G  GQLG G+ E  +VP   L +K     +  +VAC    T A+ + G+
Sbjct: 59  -NSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSLK-----NVIQVACSDRHTAAILSNGE 112

Query: 540 VFSMGSADYGQLGSPGSTGKFPTRIEGNI-----KHRYIE-----DIACGSYHIAVVSSK 589
           +++ G +  G+LG     G+F   I  N+     K + +E      ++CGSYH   ++  
Sbjct: 113 LYTWGCSKNGKLGH----GQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDD 168

Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +  TWG G  G+LGHGD ++  TP L+E+L    +K + CG + TA + +
Sbjct: 169 KKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLV 219


>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
           abelii]
          Length = 1049

 Score =  159 bits (401), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 164/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL+G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG  H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 154/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG  H+ A+ +            + ++F WG 
Sbjct: 116 LGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSK------------ASEVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  ++  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 103/210 (49%), Gaps = 14/210 (6%)

Query: 243 GSCHE-DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
           G CH        +VF WG+    G LG           D +    P++L+S + +    +
Sbjct: 145 GYCHSLALSKASEVFCWGQN-KYGQLG--------LGTDCKKQTSPQLLKSLLGIPFMQV 195

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G  H+ ++T  G IF WG    G+LG   E D   P L+ +L    I  + CGE HT 
Sbjct: 196 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTA 255

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITS 420
           A+T  G ++T+G G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPS 312

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
           +G++++FG G  G LG G  S+   P  V+
Sbjct: 313 SGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 13/171 (7%)

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK---VACGHSITIALTATGQVFSMG 544
           +  WG+ + GQLG G  +  +V L  + SD     K   V CG   T+ +   G V++ G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIV-LEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
             D GQLG   S  K P ++   +  + I  ++CG  H   ++ K +VY WG  ++GQLG
Sbjct: 60  CNDLGQLGHEKSRKK-PEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLG 117

Query: 605 H-GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSG 654
             G  E  + P  +++L D Q+  V CG       C    +S A    C G
Sbjct: 118 LVGSEECIRVPRNIKSLSDIQIVQVACGY------CHSLALSKASEVFCWG 162


>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 364

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/346 (33%), Positives = 170/346 (49%), Gaps = 25/346 (7%)

Query: 262 LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWG 321
           LG G LG      ++   D  D   P  L + V  D   IA    H   +T +G++++ G
Sbjct: 7   LGRGDLG------QLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTG 60

Query: 322 EGSGGKLG-HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNL 379
               G+LG  G+E  V  P  + AL+   +  +ACG  HT AVT +G L +WG D    L
Sbjct: 61  SNDAGQLGVRGMEEQV-VPIRVAALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQL 119

Query: 380 GL-LGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG 438
           G   G + +     PR V G  + L  S +  G +HT A+T +G +++FGDG+ GALGHG
Sbjct: 120 GFDSGNIVDGVQ--PRIVKGSRD-LHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHG 176

Query: 439 DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ 498
           +    S P  V++L  L     +CG  H+AA+                K+FTWG G  GQ
Sbjct: 177 NLDGCSTPSLVKSLWGLGVTQIACGENHSAALT------------VDGKVFTWGRGKYGQ 224

Query: 499 LGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG 558
           LGHG  +   +P+ VK   D    ++ACG   T+A+T+ G++FS G   +GQ G      
Sbjct: 225 LGHGSTQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKED 284

Query: 559 KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
               +    ++ R +  ++ G+ H  V+  + EVY WG     QLG
Sbjct: 285 VLSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWGDCEQRQLG 330



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 163/326 (50%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           +++ G G  G+LG G  +D   P  +  L G +I  +A  ++HT  +T  G++YT G   
Sbjct: 4   VYALGRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGS-- 61

Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
           ++ G LG        +P +V+  ++   ++ I CG  HT A+T  G L ++G   +G LG
Sbjct: 62  NDAGQLGVRGMEEQVVPIRVA-ALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLG 120

Query: 437 H--GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG 494
              G+      PR V+  ++L     + G +HT A+              S  ++++GDG
Sbjct: 121 FDSGNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALT------------GSGDVYSFGDG 168

Query: 495 AEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSP 554
           + G LGHG+ +    P  VK    +   ++ACG + + ALT  G+VF+ G   YGQLG  
Sbjct: 169 SSGALGHGNLDGCSTPSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGH- 227

Query: 555 GSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
           GST   K P  ++  + H  I+ IACG  H   ++S   +++WG G  GQ GHG  E+  
Sbjct: 228 GSTQNIKLPVAVKALVDHDVIQ-IACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVL 286

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
           +P  V  L  + +  V  G+  T  +
Sbjct: 287 SPKQVHQLEGRVLVQVSAGARHTVVL 312



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 13/194 (6%)

Query: 251 GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
           G GDV+ +G+G    L  G ++G             P +++S   L    IACG  H+  
Sbjct: 158 GSGDVYSFGDGSSGALGHGNLDGCST----------PSLVKSLWGLGVTQIACGENHSAA 207

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           +T  G++F+WG G  G+LGHG   ++  P  + AL   ++  +ACG  HT A+T  G L+
Sbjct: 208 LTVDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLF 267

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WG G+   G  G  ++     P++V  Q+EG  +  +  G  HT  +   G+++ +GD 
Sbjct: 268 SWGHGL--WGQTGHGTKEDVLSPKQVH-QLEGRVLVQVSAGARHTVVLLDRGEVYGWGDC 324

Query: 431 TFGALGHGDRSSTS 444
               LG  DR   S
Sbjct: 325 EQRQLGTCDRCDFS 338


>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Meleagris gallopavo]
          Length = 1050

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 178/361 (49%), Gaps = 35/361 (9%)

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG 356
           + + +ACG  H+V + + G++++ G  + G+LGH  E++ S P+LI AL G +I  VACG
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--ESEGSKPELIGALAGQHIVHVACG 92

Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVS-EISHWIPRKVSGQMEGLQISSICCGPWHT 415
           E H+ A++  G +++WG G  + G LG  + E +  +PR +  ++    I  I CG WH 
Sbjct: 93  ESHSVALSDQGQVFSWGAG--SDGQLGLTTIEDAVTVPRLIK-KLNQQTILQISCGNWHC 149

Query: 416 AAITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            A+ + G+ FT+G  ++G LG G    S + P+ V++L  +     + G  H+ A+    
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFAL---- 205

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
              SG+       +F WG  + GQLG  D   R  P  VK+        ++CG   T  L
Sbjct: 206 -SLSGA-------VFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257

Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVY 593
           T +G VF+ G+   GQLG      +   R    +    +  IACG +H +A V S   +Y
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIY 317

Query: 594 TWGKGANGQLGHGDNENKQTPTLV---------------EALRDKQVKSVVCGSNFTAAI 638
            +G G  GQLG G   N + P+ V               +A +   VK +  G + T  +
Sbjct: 318 AFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKYHIVKHIFSGGDQTFVL 377

Query: 639 C 639
           C
Sbjct: 378 C 378



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 165/336 (49%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGK--LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+  +G  ++  +  P++   ++  N+  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG  SE S     ++ G + G  I  + CG  H+ A++  G++F++G G+ G 
Sbjct: 60  -LNTKGQLGHESEGSK---PELIGALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQ 115

Query: 435 LGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      + +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA------------ADGQFFTWGQ 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  VK  D I   +VA G + + AL+ +G VF  G    GQLG
Sbjct: 164 NSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDERDRESPCHVK-LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG + T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYA 318



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 123/251 (49%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG G  +G LG       I  A     L+ K+ + T++     I+CG+ H + + 
Sbjct: 103 GQVFSWGAG-SDGQLGLTT----IEDAVTVPRLIKKLNQQTIL----QISCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L+G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   ++ G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 WGK--NSSGQLGLSDERDRESPCHVK-LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVP-----------SSGMIYAF 319

Query: 492 GDGAEGQLGHG 502
           G G  GQLG G
Sbjct: 320 GCGTRGQLGTG 330



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 4/165 (2%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+ ++S   +    +A G  H+  ++  G +F WG+ S G+LG   E D   P  +  L 
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLR 240

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
              +  ++CGE HT  +T SG ++T+G G  + G LG  S      PR+V  ++ G ++S
Sbjct: 241 SQKVVYISCGEEHTAVLTKSGGVFTFGAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVS 297

Query: 407 SICCGPWHTAA-ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
            I CG  HT A + S+G ++ FG GT G LG G   +   P  V+
Sbjct: 298 QIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342


>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Sarcophilus harrisii]
          Length = 979

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 161/347 (46%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    Q + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL G    I   +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIR--VPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  I CG +H+ A++   ++F++G    G LG G +    S P+ +++L 
Sbjct: 130 NIK-SLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +     + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFTQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRFVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 157/327 (48%), Gaps = 21/327 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  T G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+      + GS      ++F+WG 
Sbjct: 116 LGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLAL------SKGS------EVFSWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G + + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 +F   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAIC 639
            P  V  L    V  + CG   T+A  
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG   +GQLG    E  + VP  +K   DI   ++ACG+  ++AL+   +VFS G   
Sbjct: 106 YAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           +GQLG      +   P  I+  +   + + +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 HGQLGLGFELKRQSSPQLIKSLLGIPFTQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 102/198 (51%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+   +G LG    G E+          P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFSWGQN-KHGQLG---LGFELKRQSS-----PQLIKSLLGIPFTQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 19/168 (11%)

Query: 488 LFTWGDGAEGQLGHGDA------EPRVVPLCV--KVSDDISFCKVACGHSITIALTATGQ 539
           +  WG+ + GQLG G        EPR     +  KV D      V CG   T+ +   G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQD------VGCGLRHTVFVLDDGT 54

Query: 540 VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
           V++ G  D GQLG   S  K P ++   +  + I  ++CG  H   ++ K +VY WG   
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK-PEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDT 112

Query: 600 NGQLG-HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSI 646
           +GQLG  G  E  + P  +++L D Q+  + CG  +  ++ L KG  +
Sbjct: 113 DGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACG--YYHSLALSKGSEV 158


>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
 gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
          Length = 487

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 114/348 (32%), Positives = 176/348 (50%), Gaps = 30/348 (8%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CGS ++  +T  G +  WG G  G+LG G   D   P++   L+  N+  VAC + HT
Sbjct: 47  VSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRV--NLSLKNVVQVACSDRHT 104

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVS-EISHWI---PRKVSGQMEGLQISSICCGPWHTA 416
            A+  +G+LYTWG   +     GQ    IS+ +   P KV   +EG ++  + CG +HT 
Sbjct: 105 AAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKA-LEGEKVIQVSCGSYHTG 163

Query: 417 AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
            +T   K  T+G G  G LGHGD      P+ +E+L  L     SCG  HTA +      
Sbjct: 164 CLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAIL------ 217

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP-LCVKVSDDISFCKVACGHSITIALT 535
                 L + KL+ +G GA G+LG G  +  ++P L     +DI   KV+ G   + A+T
Sbjct: 218 ------LVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVT 271

Query: 536 ATGQVFSMGSADYGQLG----SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             G+V++ G    G+LG     P      P R+  N++  +I DI+CG+ H   +S   +
Sbjct: 272 KCGKVYTWGQG--GRLGHIFNGPEHDFLSPKRLS-NLEKAFIVDISCGNSHSVALSDVGD 328

Query: 592 VYTWGKGANGQLGHG-DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +YTWG   N  +GHG    +   P+    L++K +  VVC S+ + A+
Sbjct: 329 IYTWGMTKN--IGHGIQGIHPNMPSKHPILQNKNIVQVVCSSSHSIAL 374



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 168/365 (46%), Gaps = 44/365 (12%)

Query: 237 VSSSSQGSCHEDFDGL----GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLES 292
           +SS S+ SC  ++       GD+ +WG G G G LG           +  D L+P+V  +
Sbjct: 41  LSSISKVSCGSNYSAAITNSGDLILWGYG-GCGQLG---------FGNLEDCLVPRV--N 88

Query: 293 TVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG------VEADVSYPKLIDALN 346
             + +   +AC  +H   +   G++++WG    GKLGHG          VS P  + AL 
Sbjct: 89  LSLKNVVQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALE 148

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
           G  +  V+CG +HT  +T      TWG G+   G LG       + P+ +   + GL I 
Sbjct: 149 GEKVIQVSCGSYHTGCLTDDKKALTWGLGLQ--GRLGHGDTQDIFTPKLIE-SLAGLPIK 205

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE-TLKELKTVMASCGVW 465
            I CG  HTA +   GKL+ FG G FG LG G      +PR +E  L++++    S G  
Sbjct: 206 EISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQ 265

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH---GDAEPRVVPLCVKVSDDISFC 522
           H+AA+ +              K++TWG G  G+LGH   G     + P  +   +     
Sbjct: 266 HSAAVTKCG------------KVYTWGQG--GRLGHIFNGPEHDFLSPKRLSNLEKAFIV 311

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
            ++CG+S ++AL+  G +++ G       G  G     P++    ++++ I  + C S H
Sbjct: 312 DISCGNSHSVALSDVGDIYTWGMTKNIGHGIQGIHPNMPSK-HPILQNKNIVQVVCSSSH 370

Query: 583 IAVVS 587
              +S
Sbjct: 371 SIALS 375



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 143/294 (48%), Gaps = 28/294 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+++ WG    NG LG     + IS+      +  K LE   V+    ++CGS H   +T
Sbjct: 111 GELYTWGCS-KNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQ---VSCGSYHTGCLT 166

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
              +  +WG G  G+LGHG   D+  PKLI++L G  I  ++CG  HT  + ++G LY +
Sbjct: 167 DDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMF 226

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           G G    G LG  S     IPR + G +E +QI+ +  G  H+AA+T  GK++T+G G  
Sbjct: 227 GGGA--FGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG-- 282

Query: 433 GALGH---GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
           G LGH   G       P+ +  L++   V  SCG  H+ A+ +V              ++
Sbjct: 283 GRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVALSDVG------------DIY 330

Query: 490 TWGDGAEGQLGHG--DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
           TW  G    +GHG     P  +P    +  + +  +V C  S +IAL+  G + 
Sbjct: 331 TW--GMTKNIGHGIQGIHPN-MPSKHPILQNKNIVQVVCSSSHSIALSDIGALV 381



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 125/253 (49%), Gaps = 21/253 (8%)

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
           P  V G      IS + CG  ++AAIT++G L  +G G  G LG G+     VPR   +L
Sbjct: 32  PHLVDGLRHLSSISKVSCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSL 91

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV--- 509
           K +  V  +C   HTAAI            LS+ +L+TWG    G+LGHG  E  +    
Sbjct: 92  KNV--VQVACSDRHTAAI------------LSNGELYTWGCSKNGKLGHGQFELSISNNV 137

Query: 510 ---PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEG 566
              P+ VK  +     +V+CG   T  LT   +  + G    G+LG   +   F  ++  
Sbjct: 138 VSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIE 197

Query: 567 NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA-LRDKQV 625
           ++    I++I+CG +H A++    ++Y +G GA G+LG G  ++   P L+E  L D Q+
Sbjct: 198 SLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQI 257

Query: 626 KSVVCGSNFTAAI 638
             V  GS  +AA+
Sbjct: 258 TKVSLGSQHSAAV 270



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 112/231 (48%), Gaps = 35/231 (15%)

Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV-MASCGVWHTAAIVEVAGKTSGSNG 482
           +  +G   +G  G      +  P  V+ L+ L ++   SCG  ++AAI            
Sbjct: 10  VVVWGSSEYGQHGSKGEEVSPGPHLVDGLRHLSSISKVSCGSNYSAAIT----------- 58

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVP---LCVKVSDDISFCKVACGHSITIALTATGQ 539
            +S  L  WG G  GQLG G+ E  +VP   L +K     +  +VAC    T A+ + G+
Sbjct: 59  -NSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSLK-----NVVQVACSDRHTAAILSNGE 112

Query: 540 VFSMGSADYGQLGSPGSTGKFPTRIEGNI-----KHRYIE-----DIACGSYHIAVVSSK 589
           +++ G +  G+LG     G+F   I  N+     K + +E      ++CGSYH   ++  
Sbjct: 113 LYTWGCSKNGKLGH----GQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDD 168

Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +  TWG G  G+LGHGD ++  TP L+E+L    +K + CG + TA + +
Sbjct: 169 KKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLV 219


>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1132

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 171/386 (44%), Gaps = 29/386 (7%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           V++WG  +            E+     +  L P ++ +      + I CG     L+   
Sbjct: 290 VYVWGSNIHG----------ELPGLQGKTCLQPNLVST--FKQVREIVCGQNCTFLLQTN 337

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC---GEFHTCAVTLSGDLYT 371
           G +F+ GEG+ G+LG G   D      I  L G  I  +A    G+ HT AV  SG++++
Sbjct: 338 GSVFACGEGTYGRLGQGTSDDEHSLVPITELQGYCIIQLATSLGGDGHTLAVADSGEVFS 397

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WGDG  + G LG  +      P+++   ++   +    CG  H+A +T  GK+FTFG G 
Sbjct: 398 WGDG--DYGKLGHGNSERQRKPKQIIA-LQAEHVVQASCGFKHSAVLTKDGKVFTFGQGQ 454

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           +G LG G  S    P+ + +LK       +CG  HT A+         +NG   KKL+ W
Sbjct: 455 YGILGDGGNSPQKTPQLILSLKNEHISQIACGKDHTLAL--------ANNG---KKLYAW 503

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           GDG  G+LG G    R +P  V    ++   K+ACG   +I L   G +++ G  D+  +
Sbjct: 504 GDGEFGKLGLGSTSVRSIPNLVDSYRNVCLKKIACGSKFSIVLATNGYLYTFGHKDFLGI 563

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
                      +I  ++    I DIA G  +I  + +   ++ WG    GQLG G     
Sbjct: 564 AETDLLDNTIPQIVSSLMPHPIIDIAVGCNYILALDNSGNIWGWGTNEEGQLGIGTTNPH 623

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAA 637
             P LV       +  +  G+   AA
Sbjct: 624 YLPQLVCTFSGTNITRLSAGTTHCAA 649



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 137/274 (50%), Gaps = 21/274 (7%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +Y WG  IH  G L  +   +   P  VS      Q+  I CG   T  + + G +F  G
Sbjct: 290 VYVWGSNIH--GELPGLQGKTCLQPNLVSTFK---QVREIVCGQNCTFLLQTNGSVFACG 344

Query: 429 DGTFGALGHG--DRSSTSVP-REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
           +GT+G LG G  D   + VP  E++    ++   +  G  HT A+ +            S
Sbjct: 345 EGTYGRLGQGTSDDEHSLVPITELQGYCIIQLATSLGGDGHTLAVAD------------S 392

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
            ++F+WGDG  G+LGHG++E +  P  +         + +CG   +  LT  G+VF+ G 
Sbjct: 393 GEVFSWGDGDYGKLGHGNSERQRKPKQIIALQAEHVVQASCGFKHSAVLTKDGKVFTFGQ 452

Query: 546 ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLG 604
             YG LG  G++ +   ++  ++K+ +I  IACG  H +A+ ++  ++Y WG G  G+LG
Sbjct: 453 GQYGILGDGGNSPQKTPQLILSLKNEHISQIACGKDHTLALANNGKKLYAWGDGEFGKLG 512

Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G    +  P LV++ R+  +K + CGS F+  +
Sbjct: 513 LGSTSVRSIPNLVDSYRNVCLKKIACGSKFSIVL 546



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 156/328 (47%), Gaps = 25/328 (7%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           ++ WG    G+L          P L+       +  + CG+  T  +  +G ++  G+G 
Sbjct: 290 VYVWGSNIHGELPGLQGKTCLQPNLVSTF--KQVREIVCGQNCTFLLQTNGSVFACGEGT 347

Query: 377 HNLGLLGQ-VSEISH-WIPRKVSGQMEG---LQISSICCGPWHTAAITSAGKLFTFGDGT 431
           +  G LGQ  S+  H  +P     +++G   +Q+++   G  HT A+  +G++F++GDG 
Sbjct: 348 Y--GRLGQGTSDDEHSLVPIT---ELQGYCIIQLATSLGGDGHTLAVADSGEVFSWGDGD 402

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           +G LGHG+      P+++  L+    V ASCG  H+A + +              K+FT+
Sbjct: 403 YGKLGHGNSERQRKPKQIIALQAEHVVQASCGFKHSAVLTK------------DGKVFTF 450

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ-VFSMGSADYGQ 550
           G G  G LG G   P+  P  +    +    ++ACG   T+AL   G+ +++ G  ++G+
Sbjct: 451 GQGQYGILGDGGNSPQKTPQLILSLKNEHISQIACGKDHTLALANNGKKLYAWGDGEFGK 510

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG   ++ +    +  + ++  ++ IACGS    V+++   +YT+G      +   D  +
Sbjct: 511 LGLGSTSVRSIPNLVDSYRNVCLKKIACGSKFSIVLATNGYLYTFGHKDFLGIAETDLLD 570

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
              P +V +L    +  +  G N+  A+
Sbjct: 571 NTIPQIVSSLMPHPIIDIAVGCNYILAL 598



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 152/338 (44%), Gaps = 25/338 (7%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKV-LESTVVLDAQSIACGSKHAVLV 311
           G VF  GEG   G LG         ++D   +L+P   L+   ++   +   G  H + V
Sbjct: 338 GSVFACGEG-TYGRLGQG-------TSDDEHSLVPITELQGYCIIQLATSLGGDGHTLAV 389

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
              G++FSWG+G  GKLGHG       PK I AL   ++   +CG  H+  +T  G ++T
Sbjct: 390 ADSGEVFSWGDGDYGKLGHGNSERQRKPKQIIALQAEHVVQASCGFKHSAVLTKDGKVFT 449

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG-KLFTFGDG 430
           +G G +  G+LG         P+ +   ++   IS I CG  HT A+ + G KL+ +GDG
Sbjct: 450 FGQGQY--GILGDGGNSPQKTPQLILS-LKNEHISQIACGKDHTLALANNGKKLYAWGDG 506

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LG G  S  S+P  V++ + +     +CG   +  +         +NG     L+T
Sbjct: 507 EFGKLGLGSTSVRSIPNLVDSYRNVCLKKIACGSKFSIVL--------ATNG----YLYT 554

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G      +   D     +P  V          +A G +  +AL  +G ++  G+ + GQ
Sbjct: 555 FGHKDFLGIAETDLLDNTIPQIVSSLMPHPIIDIAVGCNYILALDNSGNIWGWGTNEEGQ 614

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
           LG   +   +  ++        I  ++ G+ H A  S+
Sbjct: 615 LGIGTTNPHYLPQLVCTFSGTNITRLSAGTTHCAAWSN 652


>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pongo abelii]
          Length = 1057

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 164/347 (47%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL+G  SE    +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG  H+ A++ A ++F +G   +G LG G D    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  +  + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 154/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  + G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 435 LGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG  H+ A+ +            + ++F WG 
Sbjct: 116 LGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSK------------ASEVFCWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T+A 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAF 309



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  ++GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VF  G   
Sbjct: 106 YAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  ++  +   +++ +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 103/210 (49%), Gaps = 14/210 (6%)

Query: 243 GSCHE-DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
           G CH        +VF WG+    G LG           D +    P++L+S + +    +
Sbjct: 145 GYCHSLALSKASEVFCWGQN-KYGQLG--------LGTDCKKQTSPQLLKSLLGIPFMQV 195

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G  H+ ++T  G IF WG    G+LG   E D   P L+ +L    I  + CGE HT 
Sbjct: 196 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTA 255

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITS 420
           A+T  G ++T+G G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPS 312

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
           +G++++FG G  G LG G  S+   P  V+
Sbjct: 313 SGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342


>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Sarcophilus harrisii]
          Length = 1049

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 161/347 (46%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    Q + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL G    I   +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIR--VPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  I CG +H+ A++   ++F++G    G LG G +    S P+ +++L 
Sbjct: 130 NIKS-LTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +     + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFTQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRFVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 157/327 (48%), Gaps = 21/327 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  T G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+      + GS      ++F+WG 
Sbjct: 116 LGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLAL------SKGS------EVFSWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G + + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 +F   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAIC 639
            P  V  L    V  + CG   T+A  
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG   +GQLG    E  + VP  +K   DI   ++ACG+  ++AL+   +VFS G   
Sbjct: 106 YAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           +GQLG      +   P  I+  +   + + +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 HGQLGLGFELKRQSSPQLIKSLLGIPFTQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 102/198 (51%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+   +G LG    G E+          P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFSWGQN-KHGQLG---LGFELKRQSS-----PQLIKSLLGIPFTQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 19/168 (11%)

Query: 488 LFTWGDGAEGQLGHGDA------EPRVVPLCV--KVSDDISFCKVACGHSITIALTATGQ 539
           +  WG+ + GQLG G        EPR     +  KV D      V CG   T+ +   G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQD------VGCGLRHTVFVLDDGT 54

Query: 540 VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
           V++ G  D GQLG   S  K P ++   +  + I  ++CG  H   ++ K +VY WG   
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK-PEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDT 112

Query: 600 NGQLG-HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSI 646
           +GQLG  G  E  + P  +++L D Q+  + CG  +  ++ L KG  +
Sbjct: 113 DGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACG--YYHSLALSKGSEV 158


>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 2305

 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 206/436 (47%), Gaps = 45/436 (10%)

Query: 215 GLDDANSRSSTADSFRI-------SLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLL 267
           GLD  +  +ST  SF         +++SA SS S  S  +  D    +  WG G      
Sbjct: 498 GLDSPHHTTSTGGSFTPGSSPPLNAVNSAESSLSMRSATQ-LDTSRGLMTWGSG------ 550

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSG-- 325
             +   +   S ++     P+ L +  + D  SI+CGS ++  +T+ G ++ WG GS   
Sbjct: 551 --SYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTENGDVYMWGRGSVKN 608

Query: 326 ---GKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLL 382
                LG+G   D   P+ +++L    I +++ G +H+ AV  +G+L TWG G    G L
Sbjct: 609 PPIATLGNGTFDDQLLPQKVESLQ--EIVVISIGFYHSAAVKSNGELLTWGCG--EDGQL 664

Query: 383 GQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSS 442
           G     +  IP KV   +    ++ + CG  HT  +T  GK+FT+G   +G LG GD   
Sbjct: 665 GHGDVFNQPIP-KVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQK 723

Query: 443 TSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG 502
              P  V +L +   +  +CG  H A +             +++++  +G+GA      G
Sbjct: 724 NCTPMLVTSLDKYHIIQIACGATHNAVLT------------NNREVLVFGNGA----AMG 767

Query: 503 DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT 562
            A    +P+ V     ++  +++CGH  T ALT  G V++ GS    +LG    T +   
Sbjct: 768 SANIISIPIMVPSLKIMNIERLSCGHYSTAALTECGDVYTWGSGQ--ELGHGHGTSEAHP 825

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRD 622
           ++   ++++ I  I+CG  H+A ++   ++YT GK   GQLGH   +  + P  +++L  
Sbjct: 826 KLVETLRNQSIRQISCGGRHMAFLTDSGKIYTSGKDPFGQLGHAAGDQNR-PKKIDSLLK 884

Query: 623 KQVKSVVCGSNFTAAI 638
               S+ CG N  AA+
Sbjct: 885 TTFMSISCGENHNAAL 900



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 141/292 (48%), Gaps = 38/292 (13%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++  WG G  +G LG           D  +  +PKV++S        + CG KH + +T
Sbjct: 651 GELLTWGCG-EDGQLG---------HGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLT 700

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K G++F+WG    G+LG G       P L+ +L+  +I  +ACG  H   +T + ++  +
Sbjct: 701 KNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVF 760

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           G+G      +G  + IS  IP  V   ++ + I  + CG + TAA+T  G ++T+G G  
Sbjct: 761 GNG----AAMGSANIIS--IPIMVP-SLKIMNIERLSCGHYSTAALTECGDVYTWGSGQ- 812

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
             LGHG  +S + P+ VETL+       SCG  H A + +            S K++T G
Sbjct: 813 -ELGHGHGTSEAHPKLVETLRNQSIRQISCGGRHMAFLTD------------SGKIYTSG 859

Query: 493 DGAEGQLGH--GDA-EPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
               GQLGH  GD   P+ +   +K     +F  ++CG +   AL  T + F
Sbjct: 860 KDPFGQLGHAAGDQNRPKKIDSLLKT----TFMSISCGENHNAALFDTTRSF 907



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 21/241 (8%)

Query: 424 LFTFGDGTFGALGHG--DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           L T+G G++  LG    ++ S   P  +           SCG +++AA+ E        N
Sbjct: 544 LMTWGSGSYCKLGFKSVEKDSQPTPERLPNFNISDICSISCGSYYSAALTE--------N 595

Query: 482 GLSSKKLFTWGDGAE-----GQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           G     ++ WG G+        LG+G  + +++P  V+   +I    +   HS   A+ +
Sbjct: 596 G----DVYMWGRGSVKNPPIATLGNGTFDDQLLPQKVESLQEIVVISIGFYHSA--AVKS 649

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
            G++ + G  + GQLG      +   ++  +I   ++  + CG  H   ++   +V+TWG
Sbjct: 650 NGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTICLTKNGKVFTWG 709

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCR 656
               GQLG GD +   TP LV +L    +  + CG+   A +  ++ V +  +    G  
Sbjct: 710 TSEYGQLGLGDTQKNCTPMLVTSLDKYHIIQIACGATHNAVLTNNREVLVFGNGAAMGSA 769

Query: 657 N 657
           N
Sbjct: 770 N 770


>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 163/310 (52%), Gaps = 18/310 (5%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK-QGQIFSWGEGSGGKLGHGVE 333
           ++   D  D L+P V+         S+ CG+ H    ++ + Q++SWG G  G+LGHG  
Sbjct: 45  QLGHGDAEDRLVPTVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNS 104

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
            DV  P+ + AL G  I  +ACG+ H  AVT++G++ +WG   +  G LG  +     +P
Sbjct: 105 TDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGR--NQNGQLGLGTTEDSLLP 162

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           + +    EG+ +  I  G  HTAA+T  G ++ +G G +G LG GDR+   VP +V +++
Sbjct: 163 QTIQ-AFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVE 221

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
             K V+ +CG  HT  +             SS  L+T+G    GQLGHGD E  +VP  V
Sbjct: 222 GDKMVLVACGWRHTITVS------------SSGSLYTYGWSKYGQLGHGDFEDHLVPHKV 269

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNI-KHRY 572
           +   D S  +++ G   T+ALT+ G+++  G   +GQ+G+ G      +  + N  + + 
Sbjct: 270 EALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGA-GDNADHCSPAQVNFPEEQK 328

Query: 573 IEDIACGSYH 582
           +  +ACG  H
Sbjct: 329 VAQVACGWRH 338



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 172/365 (47%), Gaps = 33/365 (9%)

Query: 283 DALLPKVLEST---VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
           DA L  V +     VVL    ++ G+ H+V +     + +WG G  G+LGHG   D   P
Sbjct: 2   DAALSAVADEAPPAVVL----VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVP 57

Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLS-GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
            +I   +   I  V CG  HT A +     +Y+WG G  + G LG  +    + P+ V  
Sbjct: 58  TVISGFDAPGITSVICGADHTTAYSEDEHQVYSWGWG--DFGRLGHGNSTDVFTPQPVK- 114

Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV 458
            ++G++I  + CG  H  A+T AG++ ++G    G LG G    + +P+ ++  + +   
Sbjct: 115 ALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVK 174

Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
           M + G  HTAA+ E               ++ WG G  G LG GD   R VP  V   + 
Sbjct: 175 MIAAGAEHTAAVTE------------DGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEG 222

Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-----PTRIEGNIKHRYI 573
                VACG   TI ++++G +++ G + YGQLG     G F     P ++E  +K    
Sbjct: 223 DKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGH----GDFEDHLVPHKVEA-LKDSST 277

Query: 574 EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSN 633
             I+ G  H   ++S  ++Y WG    GQ+G GDN +  +P  V    +++V  V CG  
Sbjct: 278 SQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWR 337

Query: 634 FTAAI 638
            T A 
Sbjct: 338 HTLAF 342



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 129/260 (49%), Gaps = 15/260 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   +  D   P+ +++   +  + +ACG  H + VT  G++ SWG    G+LG G   D
Sbjct: 99  LGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTED 158

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRK 395
              P+ I A  G ++ M+A G  HT AVT  GD+Y WG G    G LG       ++P K
Sbjct: 159 SLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWG--RYGNLGLGDRNDRFVPEK 216

Query: 396 VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
           VS  +EG ++  + CG  HT  ++S+G L+T+G   +G LGHGD     VP +VE LK+ 
Sbjct: 217 VS-SVEGDKMVLVACGWRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDS 275

Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
            T   S G  HT A+             S  KL+ WG    GQ+G GD      P  V  
Sbjct: 276 STSQISGGWRHTMALT------------SDGKLYGWGWNKFGQVGAGDNADHCSPAQVNF 323

Query: 516 SDDISFCKVACGHSITIALT 535
            ++    +VACG   T+A T
Sbjct: 324 PEEQKVAQVACGWRHTLAFT 343



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 3/119 (2%)

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYH 582
           V+ G S ++AL A   + + G  + GQLG   +  +  PT I G      I  + CG+ H
Sbjct: 19  VSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISG-FDAPGITSVICGADH 77

Query: 583 IAVVS-SKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
               S  + +VY+WG G  G+LGHG++ +  TP  V+AL+  ++K + CG +   A+ +
Sbjct: 78  TTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTM 136


>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Sarcophilus harrisii]
          Length = 1057

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 161/347 (46%), Gaps = 20/347 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    Q + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGL G    I   +PR
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIR--VPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  I CG +H+ A++   ++F++G    G LG G +    S P+ +++L 
Sbjct: 130 NIKS-LTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +     + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFTQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRFVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+ 
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 157/327 (48%), Gaps = 21/327 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G  T G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L +++ V  +CG +H+ A+      + GS      ++F+WG 
Sbjct: 116 LGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLAL------SKGS------EVFSWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G + + +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 +F   +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAIC 639
            P  V  L    V  + CG   T+A  
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAFV 310



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG   +GQLG    E  + VP  +K   DI   ++ACG+  ++AL+   +VFS G   
Sbjct: 106 YAWGLDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           +GQLG      +   P  I+  +   + + +A G  H  V++    ++ WG+   GQLG 
Sbjct: 166 HGQLGLGFELKRQSSPQLIKSLLGIPFTQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 102/198 (51%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+   +G LG    G E+          P++++S + +    +A G  H+ ++T 
Sbjct: 157 EVFSWGQN-KHGQLG---LGFELKRQSS-----PQLIKSLLGIPFTQVAAGGAHSFVLTL 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 19/168 (11%)

Query: 488 LFTWGDGAEGQLGHGDA------EPRVVPLCV--KVSDDISFCKVACGHSITIALTATGQ 539
           +  WG+ + GQLG G        EPR     +  KV D      V CG   T+ +   G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQD------VGCGLRHTVFVLDDGT 54

Query: 540 VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
           V++ G  D GQLG   S  K P ++   +  + I  ++CG  H   ++ K +VY WG   
Sbjct: 55  VYTCGCNDLGQLGHEKSRKK-PEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDT 112

Query: 600 NGQLG-HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSI 646
           +GQLG  G  E  + P  +++L D Q+  + CG  +  ++ L KG  +
Sbjct: 113 DGQLGLPGTEEYIRVPRNIKSLTDIQIVQIACG--YYHSLALSKGSEV 158


>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60467743|gb|EAL65761.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2083

 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 208/451 (46%), Gaps = 98/451 (21%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G++F WG+   +G LG  ++  +I +  +R        +S +++    + CG +H++ V 
Sbjct: 1237 GELFTWGKN-QSGQLGHGLDIGKIQTTPKRLEFFRG--KSPIIM----VECGGEHSICVD 1289

Query: 313  KQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
                ++SWG+   G+LGHG ++   + PK+I+ ++G  I  +A G  HT  +  SG+LY+
Sbjct: 1290 SDYVVYSWGQDKFGQLGHGTKSVSQNRPKIIEDISGQKIQAIAAGFAHTIVLKKSGELYS 1349

Query: 372  WGDGIHNLGLLGQVSEISHWIPRKVS-GQMEGLQ-----ISSICCGPWHTAAITSAGKLF 425
            +G G  + G LG  S +S  IP ++    + G+Q     I+ I CG  H+   +  G+++
Sbjct: 1350 FGYG--DQGQLGHGSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSVICSDNGEVY 1407

Query: 426  TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            ++G G  G LGHG+  S + PR +E LK +  +  SCG ++T A  ++            
Sbjct: 1408 SWGLGKQGQLGHGNYESIARPRLIEALKGVTKI--SCGHFYTMATTDL------------ 1453

Query: 486  KKLFTWGDGAEGQLGHG----DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ-- 539
            K +++WG G   +LGHG    +A PRVV   ++ +      K+ CG + TI LT  G   
Sbjct: 1454 KNVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQKN----VSKIVCGLNHTITLTYPGDLN 1509

Query: 540  ---------------------------------------------------VFSMGSADY 548
                                                               +++ G+ ++
Sbjct: 1510 NNSLSNDDDVNDFIDLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPIYACGAGEH 1569

Query: 549  GQLG------SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
            G+LG      SP      PT I+G +    + DI+CG+   A+++S   +Y WG G  GQ
Sbjct: 1570 GKLGLGGDLKSPFFDKPIPTAIKG-VNALNLIDISCGTDFTAMITSNGALYVWGYGNFGQ 1628

Query: 603  LGHGDNENKQTPTLVEALRDKQVKSVVCGSN 633
            +G+G  ++   P  +     K  +S +   N
Sbjct: 1629 IGNGKTDDAWVPIRIPLTDSKANQSSLQSDN 1659



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 176/405 (43%), Gaps = 76/405 (18%)

Query: 298  AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD--VSYPKLIDALNG-SNIHMVA 354
            A  ++CG  H  L+++ G++F+WG+   G+LGHG++     + PK ++   G S I MV 
Sbjct: 1220 AIKVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVE 1279

Query: 355  CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQ-VSEISHWIPRKVSGQMEGLQISSICCGPW 413
            CG  H+  V     +Y+WG      G LG     +S   P K+   + G +I +I  G  
Sbjct: 1280 CGGEHSICVDSDYVVYSWGQD--KFGQLGHGTKSVSQNRP-KIIEDISGQKIQAIAAGFA 1336

Query: 414  HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
            HT  +  +G+L++FG G  G LGHG   S S+P  +    EL T++   G+ H    +  
Sbjct: 1337 HTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRI----ELNTIV---GIQHGGGKITQ 1389

Query: 474  AGKTSGSNGLSSK--KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
                 G + + S   ++++WG G +GQLGHG+ E    P  ++    ++  K++CGH  T
Sbjct: 1390 IACGFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALKGVT--KISCGHFYT 1447

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV----- 586
            +A T    V+S G  ++ +LG      +   R+      + +  I CG  H   +     
Sbjct: 1448 MATTDLKNVYSWGLGEHMKLGHGSDKNEATPRVVDFFIQKNVSKIVCGLNHTITLTYPGD 1507

Query: 587  ------------------------------------------------SSKSEVYTWGKG 598
                                                            S  S +Y  G G
Sbjct: 1508 LNNNSLSNDDDVNDFIDLAPSTSNSSSSSSLTNDNNNGRSGRLGLNENSQVSPIYACGAG 1567

Query: 599  ANGQLGHGDNE-----NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             +G+LG G +      +K  PT ++ +    +  + CG++FTA I
Sbjct: 1568 EHGKLGLGGDLKSPFFDKPIPTAIKGVNALNLIDISCGTDFTAMI 1612


>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
           adamanteus]
          Length = 1052

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 162/346 (46%), Gaps = 20/346 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+     V    Q + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPR 394
              P+ + AL+  NI  V+CGE HT A+   G +Y WG  +   LGL G  +E    +PR
Sbjct: 72  RKRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSG--TEEYTRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG +H+ A++   ++F++G   +G LG G +    + P+ +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLL 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +     + G  H+  +              S  +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFAQIAAGGAHSFVLT------------LSGAVFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         ++CG   T ALT  G VF+ G+  YGQLG   +  +   R    +    +
Sbjct: 237 KSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEINPRKVFELMGNIV 296

Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
             IACG  H  A V S   +Y++G G NGQLG G   N+++P  V+
Sbjct: 297 TQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGTTSNRKSPFPVK 342



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 158/327 (48%), Gaps = 21/327 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+         +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V G ++   I ++ CG  HT A+   G+++ +G    G 
Sbjct: 60  -CNDLGQLGH--EKSRKRPEQV-GALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G    T VPR +++L +++ V  +CG +H+ A+      + GS      ++F+WG 
Sbjct: 116 LGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLAL------SKGS------EVFSWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G + + +  P  +K    I F ++A G + +  LT +G VF  G   +GQLG
Sbjct: 164 NKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I+CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAIC 639
            P  V  L    V  + CG   T+A  
Sbjct: 284 NPRKVFELMGNIVTQIACGRQHTSAFV 310



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 127/263 (48%), Gaps = 24/263 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG          AV+G    S       +P+ ++S   +    +ACG  H++ ++
Sbjct: 103 GQVYAWG---------FAVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALS 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           K  ++FSWG+   G+LG G E    + P++I +L G     +A G  H+  +TLSG ++ 
Sbjct: 154 KGSEVFSWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   +  G LG   E   ++P  +   +   +I  I CG  HTAA+T  G +FTFG G 
Sbjct: 214 WGR--NKFGQLGLNDENDRYVPNLLKS-LRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           +G LGH   +    PR+V  L        +CG  HT+A V            S+ +++++
Sbjct: 271 YGQLGHNSTAHEINPRKVFELMGNIVTQIACGRQHTSAFVP-----------STGRIYSF 319

Query: 492 GDGAEGQLGHGDAEPRVVPLCVK 514
           G G  GQLG G    R  P  VK
Sbjct: 320 GLGGNGQLGMGTTSNRKSPFPVK 342



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 128/276 (46%), Gaps = 19/276 (6%)

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG+       LG + E     PR+ S  +   ++  + CG  HT  +   G ++T G   
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRRCSFFVNK-KVQDVGCGLRHTVFVLDDGTVYTCGCND 62

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH    S   P +V  L     V  SCG  HT A+ +              +++ W
Sbjct: 63  LGQLGH--EKSRKRPEQVGALDAQNIVTVSCGEAHTLALND------------KGQVYAW 108

Query: 492 GDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G   +GQLG  G  E   VP  +K   DI   +VACG+  ++AL+   +VFS G   YGQ
Sbjct: 109 GFAVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKYGQ 168

Query: 551 LGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           LG      K   P  I+  +   + + IA G  H  V++    V+ WG+   GQLG  D 
Sbjct: 169 LGLGYEYKKQASPQIIKSLLGIPFAQ-IAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDE 227

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 228 NDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGV 263



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 80/165 (48%), Gaps = 19/165 (11%)

Query: 488 LFTWGDGAEGQLGHGDA------EPRVVPLCV--KVSDDISFCKVACGHSITIALTATGQ 539
           +  WG+ + GQLG G        EPR     V  KV D      V CG   T+ +   G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQD------VGCGLRHTVFVLDDGT 54

Query: 540 VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
           V++ G  D GQLG   S  K P ++ G +  + I  ++CG  H   ++ K +VY WG   
Sbjct: 55  VYTCGCNDLGQLGHEKSR-KRPEQV-GALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAV 112

Query: 600 NGQLG-HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
           +GQLG  G  E  + P  +++L D Q+  V CG  +  ++ L KG
Sbjct: 113 DGQLGLSGTEEYTRVPRNIKSLSDIQIVQVACG--YFHSLALSKG 155


>gi|348666178|gb|EGZ06006.1| hypothetical protein PHYSODRAFT_533148 [Phytophthora sojae]
          Length = 429

 Score =  158 bits (399), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 216/444 (48%), Gaps = 54/444 (12%)

Query: 211 VASGGLDDANSRSSTADSF--RISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLG 268
           V  G L  A  R+S A S   R +L  A S+ S             V+ WG    NG LG
Sbjct: 10  VLLGALRAAGCRASVARSLATRSALQHAFSTQSS------------VYTWG----NGTLG 53

Query: 269 GAVNGVEISSADRR--DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGG 326
              +G  + S  R   + L PK+LE+        +  G+ H+  + + G+++ WG     
Sbjct: 54  QLGHGPVVKSGIRNAYEELTPKLLEAFEGKAITHVEFGASHSAAIDEDGKLYVWGSNEYS 113

Query: 327 KLGHGVEADV-SYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG---IHNLGLL 382
           KLG G  +++ + P+ ++AL G  I  V+CG++ T AV   G +Y+WG G   +   G L
Sbjct: 114 KLGLGESSEMETLPREVEALKGVKIVDVSCGDYFTAAVDADGKMYSWGWGGSTMKGAGGL 173

Query: 383 GQVSEISHWIPRKVSGQM-EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS 441
           G         PR ++  + +G+ I ++ CG +HT A++  G+++ +G+G +G LG+G+  
Sbjct: 174 GHAGGKDEPTPRLLTTLVDQGVPILTVECGEFHTVALSKDGEIWAWGNGEYGRLGNGESD 233

Query: 442 STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH 501
           +  VP  +E   +   V  + G   + A+ +        NG    +L++WG  ++ QLG 
Sbjct: 234 TCEVPEPIEFFSKDNVVSIAAGRDFSFALTD--------NG----ELYSWGGNSQNQLGI 281

Query: 502 GDA------EPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG 555
           G            +P+ V+  + +S  ++A G+    A+T  G+++  GS  + +     
Sbjct: 282 GGGLAMDVYNIESIPVLVEAFNGLSVKQIAAGYDHAAAVTDDGRLYMWGSKIWIE----- 336

Query: 556 STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPT 615
                P  +    +++ ++ +ACG  +   +S   EV+T+GKG++  LGHGD +N+  P 
Sbjct: 337 -----PHEMTAVNEYKMVQ-VACGRQYTVALSENGEVFTFGKGSSNCLGHGDRKNQLQPV 390

Query: 616 LVEALRDKQVKSVVCGSNFTAAIC 639
            +EAL D  + S+ CG     AI 
Sbjct: 391 QIEALADVNITSISCGDYHMGAIA 414


>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
          Length = 663

 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/337 (33%), Positives = 167/337 (49%), Gaps = 24/337 (7%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
           A+S+ACG +H  LVT+ G++F++G    G+LG       + P  +  L    + +VACG 
Sbjct: 38  AKSVACGDEHTALVTESGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVACGR 97

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
            HT   T SG LYT+  G +  G LG     S   P KV  + E  Q  ++  G  H+ A
Sbjct: 98  IHTIVATESGCLYTF--GANGDGQLGVEDIPSSNCPVKV--ECEPRQYKALAAGADHSVA 153

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +T  G+L+ +G G+ G LG GD    S P  + T  + K +  +CG +HTA + +V    
Sbjct: 154 LTDDGELYVWGGGSEGQLGLGDIDDKSTPTLLST--DNKVISVACGYYHTAFVTDVG--- 208

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
                    ++FT+G+G  G+LG G D    V P  V + +      VACG S T+ LT 
Sbjct: 209 ---------EVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPEKAK--SVACGGSHTVVLTE 257

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
            G+V++ G    GQLG         T +  N KH+ +  IA G  H A+V+ K ++YT+G
Sbjct: 258 CGKVYTFGEGGNGQLGHKNKYFYCETPVWLNFKHK-VTQIAAGENHTALVTEKGQLYTFG 316

Query: 597 KGANGQLG--HGDNENKQTPTLVEALRDKQVKSVVCG 631
            G + +LG  H    N+  P   +      V  V CG
Sbjct: 317 DGRHAKLGLDHECYSNQYFPQRSKRFSKFIVTQVSCG 353



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/298 (32%), Positives = 148/298 (49%), Gaps = 28/298 (9%)

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           + G     VACG+ HT  VT SG L+T+  G+++ G LG + E+          +++  +
Sbjct: 33  VRGDKAKSVACGDEHTALVTESGRLFTF--GVNDWGQLG-IDEVKVSTRPCCVKKLKPEK 89

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +  + CG  HT   T +G L+TFG    G LG  D  S++ P +VE        +A+ G 
Sbjct: 90  VKVVACGRIHTIVATESGCLYTFGANGDGQLGVEDIPSSNCPVKVECEPRQYKALAA-GA 148

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
            H+ A+ +              +L+ WG G+EGQLG GD + +  P    +S D     V
Sbjct: 149 DHSVALTD------------DGELYVWGGGSEGQLGLGDIDDKSTPTL--LSTDNKVISV 194

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIA 584
           ACG+  T  +T  G+VF+ G  D G+LG     GK     + NI  +  + +ACG  H  
Sbjct: 195 ACGYYHTAFVTDVGEVFTFGEGDGGKLGQGTDYGKAVAPKKVNIPEK-AKSVACGGSHTV 253

Query: 585 VVSSKSEVYTWGKGANGQLGHGDNENK----QTPTLVEALRDKQVKSVVCGSNFTAAI 638
           V++   +VYT+G+G NGQLGH   +NK    +TP  +      +V  +  G N TA +
Sbjct: 254 VLTECGKVYTFGEGGNGQLGH---KNKYFYCETPVWLNF--KHKVTQIAAGENHTALV 306



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 106/222 (47%), Gaps = 27/222 (12%)

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           I  +G +FTFG   FG          ++P +   ++  K    +CG  HTA + E     
Sbjct: 9   IPESGAIFTFGKSRFG---------DNLPNKF-WVRGDKAKSVACGDEHTALVTE----- 53

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
                  S +LFT+G    GQLG  + +    P CVK         VACG   TI  T +
Sbjct: 54  -------SGRLFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKVVACGRIHTIVATES 106

Query: 538 GQVFSMGSADYGQLGSPG-STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           G +++ G+   GQLG     +   P ++E   + R  + +A G+ H   ++   E+Y WG
Sbjct: 107 GCLYTFGANGDGQLGVEDIPSSNCPVKVE--CEPRQYKALAAGADHSVALTDDGELYVWG 164

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+ GQLG GD ++K TPTL+    D +V SV CG   TA +
Sbjct: 165 GGSEGQLGLGDIDDKSTPTLLST--DNKVISVACGYYHTAFV 204



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 19/206 (9%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDF-DGLGDVFIWGEGLGNGLLGGAVNG 273
           GL D + +S+      +S  + V S + G  H  F   +G+VF +GEG G  L  G    
Sbjct: 172 GLGDIDDKSTPT---LLSTDNKVISVACGYYHTAFVTDVGEVFTFGEGDGGKLGQG---- 224

Query: 274 VEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
                 D   A+ PK +   +   A+S+ACG  H V++T+ G+++++GEG  G+LGH  +
Sbjct: 225 -----TDYGKAVAPKKV--NIPEKAKSVACGGSHTVVLTECGKVYTFGEGGNGQLGH--K 275

Query: 334 ADVSYPKLIDALNGSN-IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI 392
               Y +    LN  + +  +A GE HT  VT  G LYT+GDG H    L      + + 
Sbjct: 276 NKYFYCETPVWLNFKHKVTQIAAGENHTALVTEKGQLYTFGDGRHAKLGLDHECYSNQYF 335

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAI 418
           P++ S +     ++ + CG  H   +
Sbjct: 336 PQR-SKRFSKFIVTQVSCGGCHMIVL 360


>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
 gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
          Length = 1229

 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 155/306 (50%), Gaps = 26/306 (8%)

Query: 341  LIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEIS-HWIPRKVSG- 398
            L++  N     ++ CG  HT A+  +G +YTWG  +   G LGQ   +S H +P  +S  
Sbjct: 816  LVELFNKKINSVLNCGYGHT-ALIRNGTIYTWGQTVK--GCLGQGPTMSRHSLPSPISLL 872

Query: 399  QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV 458
                L++  + CG  HT A+T+ G ++ +G   +G LG GD   +  PR + +L     +
Sbjct: 873  NCFKLEVLYVACGKNHTTALTNNG-VYAWGCSKYGQLGLGDVYESPYPRLITSLANENVI 931

Query: 459  MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
              SCG +HT A+ E              ++F WG G  GQLG G+ + + +P+CV    D
Sbjct: 932  TLSCGQFHTLALTEKG------------QVFAWGWGVHGQLGLGNIDDQRLPVCVNHLKD 979

Query: 519  ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGST-GKFPTRIEGN------IKHR 571
                 +A GH  ++ L+  GQ+FS GS  +GQLG+  +T    P  I+G       I   
Sbjct: 980  QVIKDIAAGHGHSLVLSDKGQIFSFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIATG 1039

Query: 572  YIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
            Y   I+CG +H A+++    VYTWG+  +GQLG+G ++    PT +      +   + CG
Sbjct: 1040 YFHSISCGCHHSALLTVSGGVYTWGRSLDGQLGNGGHKEVTAPTQINE-NTFKADCISCG 1098

Query: 632  SNFTAA 637
              FTAA
Sbjct: 1099 CEFTAA 1104



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 149/307 (48%), Gaps = 32/307 (10%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G ++ WG+ +  G LG         +  R     P  L +   L+   +ACG  H   +T
Sbjct: 841  GTIYTWGQTV-KGCLGQG------PTMSRHSLPSPISLLNCFKLEVLYVACGKNHTTALT 893

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
              G +++WG    G+LG G   +  YP+LI +L   N+  ++CG+FHT A+T  G ++ W
Sbjct: 894  NNG-VYAWGCSKYGQLGLGDVYESPYPRLITSLANENVITLSCGQFHTLALTEKGQVFAW 952

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            G G+H    LG + +    +P  V+  ++   I  I  G  H+  ++  G++F+FG G F
Sbjct: 953  GWGVHGQLGLGNIDD--QRLPVCVN-HLKDQVIKDIAAGHGHSLVLSDKGQIFSFGSGVF 1009

Query: 433  GALGHGDRSSTSVPREVETLKELKTVMA-------SCGVWHTAAIVEVAGKTSGSNGLSS 485
            G LG G+ + +SVP  ++ + E   ++A       SCG  H+A +    G          
Sbjct: 1010 GQLGTGNTTKSSVPVLIQGISEKIILIATGYFHSISCGCHHSALLTVSGG---------- 1059

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL-TATGQVFSMG 544
              ++TWG   +GQLG+G  +    P  +  +   + C ++CG   T A    TG++F  G
Sbjct: 1060 --VYTWGRSLDGQLGNGGHKEVTAPTQINENTFKADC-ISCGCEFTAAQEKQTGKIFCWG 1116

Query: 545  SADYGQL 551
            S   GQ+
Sbjct: 1117 SNSVGQV 1123



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 155/316 (49%), Gaps = 33/316 (10%)

Query: 301  IACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHM--VACGE 357
            + CG  H  L+ + G I++WG+   G LG G   +  S P  I  LN   + +  VACG+
Sbjct: 828  LNCGYGHTALI-RNGTIYTWGQTVKGCLGQGPTMSRHSLPSPISLLNCFKLEVLYVACGK 886

Query: 358  FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
             HT A+T +G +Y WG   +    LG V E  +  PR ++  +    + ++ CG +HT A
Sbjct: 887  NHTTALTNNG-VYAWGCSKYGQLGLGDVYESPY--PRLITS-LANENVITLSCGQFHTLA 942

Query: 418  ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
            +T  G++F +G G  G LG G+     +P  V  LK+               I ++A   
Sbjct: 943  LTEKGQVFAWGWGVHGQLGLGNIDDQRLPVCVNHLKD-------------QVIKDIAAGH 989

Query: 478  SGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVK-VSDDI------SFCKVACGHS 529
              S  LS K ++F++G G  GQLG G+     VP+ ++ +S+ I       F  ++CG  
Sbjct: 990  GHSLVLSDKGQIFSFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIATGYFHSISCGCH 1049

Query: 530  ITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
             +  LT +G V++ G +  GQLG+ G      PT+I  N      + I+CG    A    
Sbjct: 1050 HSALLTVSGGVYTWGRSLDGQLGNGGHKEVTAPTQINENTFKA--DCISCGCEFTAAQEK 1107

Query: 589  KS-EVYTWGKGANGQL 603
            ++ +++ WG  + GQ+
Sbjct: 1108 QTGKIFCWGSNSVGQV 1123



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 5/118 (4%)

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK--FPTRIEG-NIKHRYIEDIACGS 580
           + CG+  T AL   G +++ G    G LG   +  +   P+ I   N     +  +ACG 
Sbjct: 828 LNCGYGHT-ALIRNGTIYTWGQTVKGCLGQGPTMSRHSLPSPISLLNCFKLEVLYVACGK 886

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            H   +++   VY WG    GQLG GD      P L+ +L ++ V ++ CG   T A+
Sbjct: 887 NHTTALTNNG-VYAWGCSKYGQLGLGDVYESPYPRLITSLANENVITLSCGQFHTLAL 943


>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
          Length = 1031

 Score =  157 bits (396), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 161/342 (47%), Gaps = 20/342 (5%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
           D    L P+  +  +  + + + CGS+H V V   G +++ G    G+LGH  +     P
Sbjct: 2   DEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGH--DKSRKKP 59

Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSG 398
             + AL+   I  V+CGE HT A+   G +++WG   H  +GL   V+E    +PR +  
Sbjct: 60  DQVGALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGL--SVAEDYIRVPRNIKS 117

Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKT 457
            +  +QI  + CG  H+ A++    ++++G   +G LG G +    S PR +++L  +  
Sbjct: 118 -LYDIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPF 176

Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
              + G  H+ A+              S  +F WG    GQLG  D   R  P  +K   
Sbjct: 177 AHIAAGGGHSFALT------------MSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLR 224

Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIA 577
                 + CG   T ALT  G VF+ G+  YGQLG   +  +   R    +    +  IA
Sbjct: 225 SQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIA 284

Query: 578 CGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
           CG  H +A V S   +Y++G G NGQLG G   N+++P  V+
Sbjct: 285 CGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 326



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/280 (34%), Positives = 144/280 (51%), Gaps = 24/280 (8%)

Query: 296 LDAQSI---ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIH 351
           LDAQ+I   +CG  H + +  +GQ+FSWG  + G++G  V  D +  P+ I +L    I 
Sbjct: 65  LDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIV 124

Query: 352 MVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGLQISSICC 410
            VACG  H+ A++   D+Y+WG   +  G LG  SEI     PR +   + G+  + I  
Sbjct: 125 QVACGHHHSLALSKESDIYSWGQ--NQYGQLGLGSEIKKESAPRHIKS-LAGIPFAHIAA 181

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
           G  H+ A+T +G +F +G   FG LG  D +  S P  +++L+  K +   CG  HTAA+
Sbjct: 182 GGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAAL 241

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
            +  G            +FT+G G  GQLGH      V P  V         ++ACG   
Sbjct: 242 TKEGG------------VFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQH 289

Query: 531 TIALT-ATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGN 567
           T+A   ++G+++S G    GQLG+ GST   K P  ++GN
Sbjct: 290 TLAFVPSSGRIYSFGLGGNGQLGT-GSTSNRKSPFTVKGN 328



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 142/308 (46%), Gaps = 19/308 (6%)

Query: 333 EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI 392
           E  V  P+  D     N+  V CG  HT  V   G +YT G   ++LG LG   + S   
Sbjct: 3   EEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCG--CNDLGQLGH--DKSRKK 58

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVET 451
           P +V G ++   I ++ CG  HT A+   G++F++G    G +G         VPR +++
Sbjct: 59  PDQV-GALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKS 117

Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG-DAEPRVVP 510
           L +++ V  +CG  H+ A+ +               +++WG    GQLG G + +    P
Sbjct: 118 LYDIQIVQVACGHHHSLALSK------------ESDIYSWGQNQYGQLGLGSEIKKESAP 165

Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH 570
             +K    I F  +A G   + ALT +G +F  G   +GQLG    T +    +  +++ 
Sbjct: 166 RHIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRS 225

Query: 571 RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
           + I  I CG  H A ++ +  V+T+G G  GQLGH    ++  P  V  L    V  + C
Sbjct: 226 QKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIVTQIAC 285

Query: 631 GSNFTAAI 638
           G   T A 
Sbjct: 286 GRQHTLAF 293



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 127/263 (48%), Gaps = 24/263 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG    +G +G +V    I         +P+ ++S   +    +ACG  H++ ++
Sbjct: 87  GQVFSWGHA-AHGQIGLSVAEDYIR--------VPRNIKSLYDIQIVQVACGHHHSLALS 137

Query: 313 KQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           K+  I+SWG+   G+LG G E    S P+ I +L G     +A G  H+ A+T+SG ++ 
Sbjct: 138 KESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFG 197

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   +  G LG   E     P  +   +   +I  ICCG  HTAA+T  G +FTFG G 
Sbjct: 198 WGR--NKFGQLGLNDETDRSAPALLKS-LRSQKIIHICCGEDHTAALTKEGGVFTFGAGG 254

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           +G LGH   +    PR+V  L        +CG  HT A V            SS +++++
Sbjct: 255 YGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVP-----------SSGRIYSF 303

Query: 492 GDGAEGQLGHGDAEPRVVPLCVK 514
           G G  GQLG G    R  P  VK
Sbjct: 304 GLGGNGQLGTGSTSNRKSPFTVK 326



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 116/243 (47%), Gaps = 18/243 (7%)

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +  + CG  HT  +   G ++T G    G LGH D+S    P +V  L     V  SCG 
Sbjct: 20  VRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGH-DKSRKK-PDQVGALDAQTIVAVSCGE 77

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCK 523
            HT A+ +              ++F+WG  A GQ+G   AE  + VP  +K   DI   +
Sbjct: 78  AHTLALND------------KGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDIQIVQ 125

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSY 581
           VACGH  ++AL+    ++S G   YGQLG      K   P  I+ ++       IA G  
Sbjct: 126 VACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIK-SLAGIPFAHIAAGGG 184

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
           H   ++    ++ WG+   GQLG  D  ++  P L+++LR +++  + CG + TAA+   
Sbjct: 185 HSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTAALTKE 244

Query: 642 KGV 644
            GV
Sbjct: 245 GGV 247


>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
          Length = 432

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 111/322 (34%), Positives = 162/322 (50%), Gaps = 33/322 (10%)

Query: 326 GKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           G+LG G E     P  ++AL+G  I  VA G+  T A++L GD+YTWG G    G LG  
Sbjct: 69  GQLGQGHERPADRPFPVEALSGKRIVYVAAGDSCTAAISLDGDVYTWGSG--EYGKLGHN 126

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
            + +  +PR V   ++G  I  +  G  H AAI   G L+ +G     + G G      +
Sbjct: 127 DDSNENLPRLVE-ALKGKNIVKVSIGGNHMAAIDKDGHLYCWGRAA--SAGSGGTEHVFI 183

Query: 446 PREVE-TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA 504
           PR ++  L++ K +  SCG  HTAA+ E              +++TWG+G EG+LGHG+ 
Sbjct: 184 PRLIKGDLEKEKVISVSCGRSHTAAVTE------------KGEVWTWGNGYEGELGHGEK 231

Query: 505 EPRVVP-----LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK 559
             +  P     L  KV D      VACG   TI +  +G ++S G+ DYGQLG   S G+
Sbjct: 232 NSQYQPKKVQSLTEKVVD------VACGRDFTIFVCESG-LYSCGADDYGQLGLGRSHGE 284

Query: 560 FPTRIEGNIKHRYIED---IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTL 616
              +   ++    + D   I+ G YH+  +     VYTWG G  GQLGHG+  +      
Sbjct: 285 RFVQTPRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGREGQLGHGEKADCSLAKP 344

Query: 617 VEALRDKQVKSVVCGSNFTAAI 638
           V+ LR+ ++  V CG   TAA+
Sbjct: 345 VDNLRNFEIVQVACGGGHTAAV 366



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 168/347 (48%), Gaps = 26/347 (7%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           +A G      ++  G +++WG G  GKLGH  +++ + P+L++AL G NI  V+ G  H 
Sbjct: 96  VAAGDSCTAAISLDGDVYTWGSGEYGKLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHM 155

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+   G LY WG         G       +IPR + G +E  ++ S+ CG  HTAA+T 
Sbjct: 156 AAIDKDGHLYCWGRAASA----GSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTE 211

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            G+++T+G+G  G LGHG+++S   P++V++L E K V  +CG   T  + E        
Sbjct: 212 KGEVWTWGNGYEGELGHGEKNSQYQPKKVQSLTE-KVVDVACGRDFTIFVCESG------ 264

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAE-PRVV--PLCVKVSDDISFCKVACGHSITIALTAT 537
                  L++ G    GQLG G +   R V  P  +  +       ++ G     AL   
Sbjct: 265 -------LYSCGADDYGQLGLGRSHGERFVQTPRSLSGTGLSDVVAISAGDYHVCALGRD 317

Query: 538 GQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
           G V++ G    GQLG          +   N+++  I  +ACG  H A V+    +YTWG+
Sbjct: 318 GLVYTWGLGREGQLGHGEKADCSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGR 377

Query: 598 GANGQLGHGDN-----ENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
           G +GQLG G         + +P  V +L    V  V  GS+ +A +C
Sbjct: 378 GRDGQLGRGGELESIASYRTSPVQVTSLPAGAVLYVTLGSDHSAVLC 424



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 95/308 (30%), Positives = 141/308 (45%), Gaps = 35/308 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           GDV+ WG G   G LG           D  +  LP+++E+    +   ++ G  H   + 
Sbjct: 110 GDVYTWGSGE-YGKLG---------HNDDSNENLPRLVEALKGKNIVKVSIGGNHMAAID 159

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYT 371
           K G ++ WG  +    G G    V  P+LI   L    +  V+CG  HT AVT  G+++T
Sbjct: 160 KDGHLYCWGRAA--SAGSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWT 217

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG+G    G LG   + S + P+KV    E  ++  + CG   T  +  +G L++ G   
Sbjct: 218 WGNGYE--GELGHGEKNSQYQPKKVQSLTE--KVVDVACGRDFTIFVCESG-LYSCGADD 272

Query: 432 FGALG----HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           +G LG    HG+R     PR +        V  S G +H  A+        G +GL    
Sbjct: 273 YGQLGLGRSHGER-FVQTPRSLSGTGLSDVVAISAGDYHVCAL--------GRDGL---- 319

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           ++TWG G EGQLGHG+     +   V    +    +VACG   T A+T  G +++ G   
Sbjct: 320 VYTWGLGREGQLGHGEKADCSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGR 379

Query: 548 YGQLGSPG 555
            GQLG  G
Sbjct: 380 DGQLGRGG 387



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 107/225 (47%), Gaps = 16/225 (7%)

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           AA+ +   L TFG    G LG G       P  VE L   + V  + G   TAAI     
Sbjct: 52  AALENGTLLTTFGLNLIGQLGQGHERPADRPFPVEALSGKRIVYVAAGDSCTAAIS---- 107

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
                       ++TWG G  G+LGH D     +P  V+     +  KV+ G +   A+ 
Sbjct: 108 --------LDGDVYTWGSGEYGKLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHMAAID 159

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
             G ++  G A     GS G+   F P  I+G+++   +  ++CG  H A V+ K EV+T
Sbjct: 160 KDGHLYCWGRA--ASAGSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWT 217

Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
           WG G  G+LGHG+  ++  P  V++L +K V  V CG +FT  +C
Sbjct: 218 WGNGYEGELGHGEKNSQYQPKKVQSLTEKVV-DVACGRDFTIFVC 261



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 1/106 (0%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+ L  T + D  +I+ G  H   + + G +++WG G  G+LGHG +AD S  K +D L 
Sbjct: 290 PRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGREGQLGHGEKADCSLAKPVDNLR 349

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHW 391
              I  VACG  HT AVT  G LYTWG G    LG  G++  I+ +
Sbjct: 350 NFEIVQVACGGGHTAAVTKDGVLYTWGRGRDGQLGRGGELESIASY 395



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 17/133 (12%)

Query: 236 AVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVV 295
           A+S+     C    DGL  V+ WG G   G LG           ++ D  L K +++   
Sbjct: 303 AISAGDYHVCALGRDGL--VYTWGLGR-EGQLG---------HGEKADCSLAKPVDNLRN 350

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG--VEADVSY---PKLIDALNGSNI 350
            +   +ACG  H   VTK G +++WG G  G+LG G  +E+  SY   P  + +L    +
Sbjct: 351 FEIVQVACGGGHTAAVTKDGVLYTWGRGRDGQLGRGGELESIASYRTSPVQVTSLPAGAV 410

Query: 351 HMVACGEFHTCAV 363
             V  G  H+  +
Sbjct: 411 LYVTLGSDHSAVL 423


>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
          Length = 1031

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/324 (33%), Positives = 164/324 (50%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H+V + + G++++ G  + G+LGHG E +   P+ I AL   +I  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHGREGN--KPEQIGALADQHIVHVACGE 93

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+ + G+ FT+G  + G LG G D  S + P+ V +L+ +     + G  H+ A+     
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             SG+       +F WG    GQLG  D E R  P  VK+        ++CG   T  LT
Sbjct: 206 SLSGA-------VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
            +G VF+ G+   GQLG      +   R    +    +  IACG  H +A V S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G GA GQLG G   N + P+ V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  ++  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -LNTKGQLGHGREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 127/251 (50%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G +    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           W  G++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 W--GMNNAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA GQLG G
Sbjct: 320 GCGARGQLGTG 330



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 93/199 (46%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG           D      P+ + S   +    +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG--------LGKDFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 267 GAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 76/163 (46%), Gaps = 31/163 (19%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGN-GLLGGAVNG 273
           G+  A   +  A SF +SLS AV                    +G G+ N G LG +   
Sbjct: 189 GIPLAQVAAGGAHSFALSLSGAV--------------------FGWGMNNAGQLGLS--- 225

Query: 274 VEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
                 DR      K+L +  V+    I+CG +H  ++TK G +F++G GS G+LGH   
Sbjct: 226 ---DEEDRESPCHVKLLRTQKVV---YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDG 375
            D   P+ +  L GS +  +ACG  HT A V  SG +Y +G G
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322


>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
          Length = 389

 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 194/393 (49%), Gaps = 29/393 (7%)

Query: 249 FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           F G G ++ WG     G LGG + G ++         +P   E+   L    +  G +  
Sbjct: 16  FQGSGTIYGWGHNH-RGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTL 65

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
             VT  G++++ G G+GG+LG G    VS P L++++    I  VA   G  H  A++  
Sbjct: 66  FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 125

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
           G++Y+WG+     G LG  +      PR +   + G+++  +  G  H+A +T+AG L+T
Sbjct: 126 GEVYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYT 182

Query: 427 FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
           +G G +G LGH D      P+ VE L+  + V  +CG      +      T         
Sbjct: 183 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDT--------- 233

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
            +++WGDG  G+LG G ++   VP+ +     +   KV CG   ++ALT +G V++ G  
Sbjct: 234 -VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 292

Query: 547 DYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
           DY +LG  GS    + P +++G ++ + +  IA GS H    +   EVYTWG    GQLG
Sbjct: 293 DYHRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLG 350

Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            G     Q P LV AL+ K+V  V CGS  T A
Sbjct: 351 DGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 383



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)

Query: 366 SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
           SG +Y WG   HN  G LG +      +P      +  L+   +  G     A+T+ GKL
Sbjct: 19  SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCE-ALATLRPVQLIGGEQTLFAVTADGKL 74

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           +  G G  G LG G   S S P  +E+++   +K V  + G  H  A+            
Sbjct: 75  YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 123

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
            S  ++++WG+  +G+LGHG+  P   P  ++    I    VA G + +  +TA G +++
Sbjct: 124 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 182

Query: 543 MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
            G   YG+LG   S  +  P  +E    HR + DIACGS       ++    V++WG G 
Sbjct: 183 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDAQTLCLTDDDTVWSWGDGD 241

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 242 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 280



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 109/222 (49%), Gaps = 14/222 (6%)

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           +G ++ +G    G LG  + +   VP   E L  L+ V    G     A+          
Sbjct: 19  SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT--------- 69

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
              +  KL+  G GA G+LG G  E    P  ++    +   KVA   G    +AL++ G
Sbjct: 70  ---ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 126

Query: 539 QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           +V+S G A+ G+LG    +     R+  +++   + D+A G  H A V++  ++YTWGKG
Sbjct: 127 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 186

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
             G+LGH D+E++  P LVEAL+  +V  + CGS     +CL
Sbjct: 187 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 228



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 10/114 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G  + L  G+ + V      RR    P+ ++        +IA GS H V  T
Sbjct: 284 GAVYTWGKGDYHRLGHGSDDHV------RR----PRQVQGLQGKKVIAIATGSLHCVCCT 333

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
           + G++++WG+   G+LG G    +  P+L+ AL G  ++ VACG  HT A + S
Sbjct: 334 EDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS 387


>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60474380|gb|EAL72317.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2044

 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 110/334 (32%), Positives = 164/334 (49%), Gaps = 30/334 (8%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            GDV++WG G    +   AV  + I   +  D LLP  LES  + D  S++ G  H   V 
Sbjct: 768  GDVYLWGRG---AVKTPAVPILGIPQIE--DQLLPFKLES--LSDVVSVSIGFCHGAAVR 820

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
              G++ +WG G  G+LGHG   +   PK+I +L    I  V CGE HT  +T +G +Y+W
Sbjct: 821  ANGELLTWGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSW 880

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            G   +    LG V++  H  P +VS  +E   +  I  G  H A +T++ ++  FG+G  
Sbjct: 881  GASEYGQLGLGDVTQ--HSSPMQVSA-LEKYNVLQIASGSTHCAVLTTSKEVLVFGNGA- 936

Query: 433  GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
                 G  S  S+P  V +LK L      CG + TAAI E               ++TWG
Sbjct: 937  ---AMGAASVVSLPTLVPSLKYLHIDRLCCGHYSTAAITECGD------------VYTWG 981

Query: 493  DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
             G E  LGHG       P  ++   + S  +++CG   T  LT +G++F+ G   +GQLG
Sbjct: 982  TGQE--LGHGGNSTETSPKLIEALRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLG 1039

Query: 553  SPGSTGKFPTRIEGNIKHRYIEDIACG-SYHIAV 585
                    P RIE   K  +I  ++CG +Y++A+
Sbjct: 1040 QMSGDQNKPKRIESLTKTTFI-SVSCGENYNVAL 1072



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 162/329 (49%), Gaps = 29/329 (8%)

Query: 317  IFSWGEGSGGKLGHGVEA-DVSYP--KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            + +WG  S  KLG  V A D S P  + +   N  +I  ++ G +++  +T +GD+Y WG
Sbjct: 715  LMTWGSASNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSYYSSVLTENGDVYLWG 774

Query: 374  DG---IHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGD 429
             G      + +LG        +P K    +E L  + S+  G  H AA+ + G+L T+G 
Sbjct: 775  RGAVKTPAVPILGIPQIEDQLLPFK----LESLSDVVSVSIGFCHGAAVRANGELLTWGV 830

Query: 430  GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
            G  G LGHGD ++   P+ +++L         CG  HT  + +        NG    K++
Sbjct: 831  GENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTK--------NG----KVY 878

Query: 490  TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
            +WG    GQLG GD      P+ V   +  +  ++A G +    LT + +V   G+   G
Sbjct: 879  SWGASEYGQLGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLVFGN---G 935

Query: 550  QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
                  S    PT +  ++K+ +I+ + CG Y  A ++   +VYTWG G   +LGHG N 
Sbjct: 936  AAMGAASVVSLPTLVP-SLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQ--ELGHGGNS 992

Query: 610  NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             + +P L+EALR++ ++ + CG   TA +
Sbjct: 993  TETSPKLIEALRNQSIRQISCGGRHTAFL 1021



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 202/434 (46%), Gaps = 49/434 (11%)

Query: 220  NSRSST----ADSFRISLSSAVSSSSQGSCHED---FDGLGDVFIWGEGLGNGLLGGAVN 272
            NS SST     D F  S  +  S S   + H      D    +  WG      L      
Sbjct: 673  NSGSSTGTTPTDGFSSSPPNGQSPSLSSTAHRSAIHLDTSRGLMTWGSASNCKL------ 726

Query: 273  GVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK----- 327
            G ++++ D+     P+ L +  + D  SI+ GS ++ ++T+ G ++ WG G+        
Sbjct: 727  GFKVTAKDQSQPT-PERLPNFNIPDICSISSGSYYSSVLTENGDVYLWGRGAVKTPAVPI 785

Query: 328  LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
            LG     D   P  +++L  S++  V+ G  H  AV  +G+L TWG G +  G LG   +
Sbjct: 786  LGIPQIEDQLLPFKLESL--SDVVSVSIGFCHGAAVRANGELLTWGVGEN--GQLGH-GD 840

Query: 388  ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPR 447
             ++ I  K+   +    I+ + CG  HT  +T  GK++++G   +G LG GD +  S P 
Sbjct: 841  TNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPM 900

Query: 448  EVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR 507
            +V  L++   +  + G  H A +             +SK++  +G+GA      G A   
Sbjct: 901  QVSALEKYNVLQIASGSTHCAVLT------------TSKEVLVFGNGA----AMGAASVV 944

Query: 508  VVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG-STGKFPTRIEG 566
             +P  V     +   ++ CGH  T A+T  G V++ G+    +LG  G ST   P  IE 
Sbjct: 945  SLPTLVPSLKYLHIDRLCCGHYSTAAITECGDVYTWGTGQ--ELGHGGNSTETSPKLIEA 1002

Query: 567  NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH--GDNENKQTPTLVEALRDKQ 624
             ++++ I  I+CG  H A ++    ++T GK + GQLG   GD +NK  P  +E+L    
Sbjct: 1003 -LRNQSIRQISCGGRHTAFLTDSGRIFTCGKDSFGQLGQMSGD-QNK--PKRIESLTKTT 1058

Query: 625  VKSVVCGSNFTAAI 638
              SV CG N+  A+
Sbjct: 1059 FISVSCGENYNVAL 1072



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 73/164 (44%), Gaps = 7/164 (4%)

Query: 488 LFTWGDGAEGQ-----LGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
           ++ WG GA        LG    E +++P  ++   D+    V+ G     A+ A G++ +
Sbjct: 770 VYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSDV--VSVSIGFCHGAAVRANGELLT 827

Query: 543 MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
            G  + GQLG   +  +   +I  ++   +I  + CG  H   ++   +VY+WG    GQ
Sbjct: 828 WGVGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQCGEKHTICLTKNGKVYSWGASEYGQ 887

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSI 646
           LG GD     +P  V AL    V  +  GS   A +   K V +
Sbjct: 888 LGLGDVTQHSSPMQVSALEKYNVLQIASGSTHCAVLTTSKEVLV 931


>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
           multifiliis]
          Length = 427

 Score =  156 bits (395), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 196/411 (47%), Gaps = 57/411 (13%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           V+ WG G          N  ++  A+  +   P+ +E     +   +      ++ +++ 
Sbjct: 45  VYAWGYG----------NFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQD 94

Query: 315 GQIFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           G++++WG+  GG LGH      ++  P+L++ L    I  ++CG FH  A++  G+LYTW
Sbjct: 95  GKVYTWGKNKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTW 154

Query: 373 GDGIHNLGLLG-QVSEISH-----------------WIPRKVSGQMEGLQISSICCGPWH 414
           G+  H  G LG ++ + S+                  +P KV   + G++   + CG   
Sbjct: 155 GNKDH--GKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQ-SLNGIKCKQVSCGGQF 211

Query: 415 TAAITSAGKLFTFGDGTFGALGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           T  +T  G++++FG+   G LG+  + +    P+++  L+ +  +   CG   +AA+   
Sbjct: 212 TVVLTENGEVYSFGNSMKGQLGYQSEETGNFQPKKIPDLQNIINI--DCGQQFSAAVS-- 267

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
                     SS K++TWG+   GQLG+  +  +  P  V          ++CG +   A
Sbjct: 268 ----------SSGKVYTWGNNDHGQLGNNQSIYQARPNQVTGFGGNKIINISCGDNFIAA 317

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
           L+  G++F+ G  + GQLG       + P +IE   K + I+ + CG  H A ++  +++
Sbjct: 318 LSNEGKLFTWGYGNDGQLGHSNRNDLYAPKQIE--FKEKIIK-VDCGGTHTAFLTQNNQL 374

Query: 593 YTWGKGANGQLGHGDNEN-----KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           Y +G+G  GQLG G+N       + TP +VE  +  +V  V CG  +T AI
Sbjct: 375 YLFGRGNEGQLGIGENIESEAAIRTTPKIVEFFKKMKVVDVTCGGEYTLAI 425



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 188/350 (53%), Gaps = 48/350 (13%)

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           Q  +++WG G+ G+LG   E +   P+ ++ L+  NI  V   +  + A++  G +YTWG
Sbjct: 42  QKTVYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWG 101

Query: 374 DGIHNLGLLGQVSEIS-HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
              +  G+LG     S + I  ++  ++E +QI  I CGP+H AAI+  G+L+T+G+   
Sbjct: 102 K--NKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDH 159

Query: 433 GALGH-------------GDRS-----STSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           G LGH             G+++      + +P +V++L  +K    SCG   T  + E  
Sbjct: 160 GKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTE-- 217

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGH-----GDAEPRVVPLCVKVSDDISFCKVACGHS 529
                 NG    +++++G+  +GQLG+     G+ +P+ +P      D  +   + CG  
Sbjct: 218 ------NG----EVYSFGNSMKGQLGYQSEETGNFQPKKIP------DLQNIINIDCGQQ 261

Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSS 588
            + A++++G+V++ G+ D+GQLG+  S  +  P ++ G   ++ I +I+CG   IA +S+
Sbjct: 262 FSAAVSSSGKVYTWGNNDHGQLGNNQSIYQARPNQVTGFGGNKII-NISCGDNFIAALSN 320

Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + +++TWG G +GQLGH +  +   P  +E  ++K +K V CG   TA +
Sbjct: 321 EGKLFTWGYGNDGQLGHSNRNDLYAPKQIE-FKEKIIK-VDCGGTHTAFL 368



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 154/298 (51%), Gaps = 35/298 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAV----NGVEISSADR-----RDALLPKVLESTVVLDAQSIAC 303
           G+++ WG    +G LG  +    N VEI   ++       ++LP  ++S   +  + ++C
Sbjct: 149 GELYTWGNK-DHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSC 207

Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDALNGSNIHMVACGEFHTCA 362
           G +  V++T+ G+++S+G    G+LG+  E   ++ PK I  L   NI  + CG+  + A
Sbjct: 208 GGQFTVVLTENGEVYSFGNSMKGQLGYQSEETGNFQPKKIPDL--QNIINIDCGQQFSAA 265

Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
           V+ SG +YTWG+  H  G LG    I    P +V+G   G +I +I CG    AA+++ G
Sbjct: 266 VSSSGKVYTWGNNDH--GQLGNNQSIYQARPNQVTG-FGGNKIINISCGDNFIAALSNEG 322

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           KLFT+G G  G LGH +R+    P+++E  KE K +   CG  HTA + +          
Sbjct: 323 KLFTWGYGNDGQLGHSNRNDLYAPKQIE-FKE-KIIKVDCGGTHTAFLTQ---------- 370

Query: 483 LSSKKLFTWGDGAEGQLGHGD-----AEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             + +L+ +G G EGQLG G+     A  R  P  V+    +    V CG   T+A+T
Sbjct: 371 --NNQLYLFGRGNEGQLGIGENIESEAAIRTTPKIVEFFKKMKVVDVTCGGEYTLAIT 426



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 10/178 (5%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           +I CG + +  V+  G++++WG    G+LG+      + P  +    G+ I  ++CG+  
Sbjct: 255 NIDCGQQFSAAVSSSGKVYTWGNNDHGQLGNNQSIYQARPNQVTGFGGNKIINISCGDNF 314

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
             A++  G L+TWG G  N G LG  +    + P+++  +    +I  + CG  HTA +T
Sbjct: 315 IAALSNEGKLFTWGYG--NDGQLGHSNRNDLYAPKQIEFKE---KIIKVDCGGTHTAFLT 369

Query: 420 SAGKLFTFGDGTFGALGHGDRSST-----SVPREVETLKELKTVMASCGVWHTAAIVE 472
              +L+ FG G  G LG G+   +     + P+ VE  K++K V  +CG  +T AI E
Sbjct: 370 QNNQLYLFGRGNEGQLGIGENIESEAAIRTTPKIVEFFKKMKVVDVTCGGEYTLAITE 427


>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Taeniopygia guttata]
          Length = 1050

 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 175/361 (48%), Gaps = 35/361 (9%)

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG 356
           + + +ACG  H+V + + G++++ G  + G+LGH  E   S P+ I AL G +I  VACG
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEG--SKPEQIGALAGQHIVHVACG 92

Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVS-EISHWIPRKVSGQMEGLQISSICCGPWHT 415
           E H+ A++  G L++WG G  + G LG  + E +  +PR +  ++    I  + CG WH 
Sbjct: 93  ESHSVALSDQGQLFSWGAG--SDGQLGLTTIEDAVTVPRLIK-KLNQQTILQVSCGNWHC 149

Query: 416 AAITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            A+ + G+ FT+G  ++G LG G    S + P+ V++L  +     + G  H+ A+    
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFAL---- 205

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
              SG+       +F WG  + GQLG  D   R  P  VK+        ++CG   T  L
Sbjct: 206 -SLSGA-------VFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257

Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVY 593
           T +G VF+ G+   GQLG      +   R    +    +  IACG +H +A V S   +Y
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIY 317

Query: 594 TWGKGANGQLGHGDNENKQTPTLV---------------EALRDKQVKSVVCGSNFTAAI 638
            +G G  GQLG G   N + P+ V               +A +   VK +  G + T  +
Sbjct: 318 AFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKYHIVKHIFSGGDQTFVL 377

Query: 639 C 639
           C
Sbjct: 378 C 378



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 165/336 (49%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGK--LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+  +G  ++  +  P++   ++  N+  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E S   P ++ G + G  I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -LNTKGQLGHDCEGSK--PEQI-GALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQ 115

Query: 435 LGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      + +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGQ 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  VK  D I   +VA G + + AL+ +G VF  G    GQLG
Sbjct: 164 NSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDERDRESPCHVK-LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG + T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYA 318



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 123/251 (49%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG       I  A     L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLGLTT----IEDAVTVPRLIKKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L+G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   ++ G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 WGK--NSSGQLGLSDERDRESPCHVK-LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVP-----------SSGMIYAF 319

Query: 492 GDGAEGQLGHG 502
           G G  GQLG G
Sbjct: 320 GCGTRGQLGTG 330



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 4/165 (2%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+ ++S   +    +A G  H+  ++  G +F WG+ S G+LG   E D   P  +  L 
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLR 240

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
              +  ++CGE HT  +T SG ++T+G G  + G LG  S      PR+V  ++ G ++S
Sbjct: 241 SQKVVYISCGEEHTAVLTKSGGVFTFGAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVS 297

Query: 407 SICCGPWHTAA-ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
            I CG  HT A + S+G ++ FG GT G LG G   +   P  V+
Sbjct: 298 QIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342


>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii GT1]
          Length = 1205

 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 195/428 (45%), Gaps = 73/428 (17%)

Query: 226 ADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDAL 285
           AD   ++  SA +  S  +C  D    G ++ WG G GNG LG   N         R +L
Sbjct: 249 ADPVVVTCCSAGAKHSM-ACTSD----GTLWTWGHG-GNGRLGLGHN---------RGSL 293

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
            P V++  +  D   +  G  H+  + +QG +++WG G  G+LGHG + ++  P+ ++  
Sbjct: 294 SPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGF 353

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGI---HNLGLLGQVSEISHWIPRKVSGQMEG 402
            G  +  VACG FHT A+T  G ++ WG G+      G  G    ++  +P+ +S  +E 
Sbjct: 354 GGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVA--VPKHLS-DIEA 410

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE---LKTVM 459
             + +I  GP+H+AA+T  G L  +G G    LGHGD+ +   P+ V  L+    +  + 
Sbjct: 411 -AVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQ 469

Query: 460 ASCGV------WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
           +  GV      +    +++V G TSG+N  S      W                      
Sbjct: 470 SMLGVSRLKREYSDLDVLDVPG-TSGTNQSS------W---------------------- 500

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK---FPTRIEGNIKH 570
                 +   + CG S TIALT  G V+  GS D GQLG      +    P ++E     
Sbjct: 501 ------TLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLE--CFS 552

Query: 571 RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
             I  IACGS H   V+   +V+ WG   NGQLG G       P  V ALR  Q   V C
Sbjct: 553 TPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR--QAVDVFC 610

Query: 631 GSNFTAAI 638
           G +++A I
Sbjct: 611 GDDYSACI 618



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 187/421 (44%), Gaps = 72/421 (17%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           +F WG+   N +LG    GVEI     R+ + P ++     +    ++CG+ ++ ++ K+
Sbjct: 70  LFGWGKNYSN-VLG---MGVEI-----RERVFPGLVPFFSKMGTFEVSCGTNNSAVLVKR 120

Query: 315 -----GQIFSWGEGSGGKLGH---------GVEADVS-------------YPKLIDALNG 347
                G+++++G G+ G+LG+         G + D S              P  +   + 
Sbjct: 121 AQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFTPKPSRVRFRDK 180

Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---------- 397
             I  ++CG  HT A++  G LY WG G +  G LGQ      + P +V           
Sbjct: 181 CKIARISCGADHTLALSDEGALYAWGVGSY--GNLGQGDTSDSYTPVRVYLGSEAGSGKK 238

Query: 398 ------GQMEGLQISSICC--GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV 449
                 G++    +   CC  G  H+ A TS G L+T+G G  G LG G    +  P  V
Sbjct: 239 KENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVV 298

Query: 450 ETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV 509
           + + +   V  + G  H+A I                 L+TWG G  G+LGHGD     V
Sbjct: 299 DYILDRDIVFVNAGDSHSACIDR------------QGVLYTWGSGGFGRLGHGDQGEIPV 346

Query: 510 PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA---DYGQLGSPGSTGKFPTRIEG 566
           P  V+    +   +VACG   T+ALT  G VF+ G+     +G+ G  GS G        
Sbjct: 347 PRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGFGE-GEDGSGGMVAVPKHL 405

Query: 567 NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVK 626
           +     + +IA G YH A V+   ++  WG G + +LGHGD +N+  P  V  LR++   
Sbjct: 406 SDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYV 465

Query: 627 S 627
           S
Sbjct: 466 S 466



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 111/469 (23%), Positives = 191/469 (40%), Gaps = 104/469 (22%)

Query: 249 FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            D  G ++ WG G G G LG           D+ +  +P+ +E    +    +ACG+ H 
Sbjct: 319 IDRQGVLYTWGSG-GFGRLG---------HGDQGEIPVPRKVEGFGGVPVLQVACGTFHT 368

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEAD---VSYPKLIDALNGSNIHMVACGEFHTCAVTL 365
           + +T +G +F+WG G     G G +     V+ PK +  +  + ++ +A G +H+ AVT+
Sbjct: 369 LALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLN-IAAGPYHSAAVTV 427

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS------------------- 406
            GDL  WG G  +   LG   + +   P+ V+     + +S                   
Sbjct: 428 GGDLLVWGVGGSSR--LGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLD 485

Query: 407 ------------------SICCGPWHTAAITSAGKLFTFGDGTFGALGHGD--RSSTSVP 446
                             S+ CG  HT A+T AG ++ +G    G LG G+        P
Sbjct: 486 VLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEP 545

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP 506
            ++E        +A CG  H  A+ +               +F WG    GQLG G   P
Sbjct: 546 VKLECFSTPIRRIA-CGSKHCLAVAQYG------------DVFAWGANDNGQLGLGVVRP 592

Query: 507 RVVPLCVKV---------SDDISFCKVACGHSITIAL---TATGQVFSMGSADYGQLG-- 552
              P  V            DD S C  + G + +++    T  G +++ G+A+ G+LG  
Sbjct: 593 SFEPAAVTALRQAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLG 652

Query: 553 ---SPGSTGKFPTRIE----------GNIKHRYIEDIAC--------GSYHIAVVSSKSE 591
              + GS    P ++            +++ +  + + C        G+ H   ++++ E
Sbjct: 653 EDVASGSI-LTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGE 711

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            Y WG G  G+LG G   N  TPT  +  +  +++SV  G+  + A+ +
Sbjct: 712 CYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSM 760



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 161/381 (42%), Gaps = 45/381 (11%)

Query: 301 IACGSKHAVLVTKQG---QIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACG 356
           +A G  H ++V  +G   Q+F WG+     LG GVE  +  +P L+   +      V+CG
Sbjct: 51  VALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEVSCG 110

Query: 357 EFHTCAVTL-----SGDLYTWGDGIHNLGLL--------------------GQVSEISHW 391
             ++  +        G +YT+G G  N G L                    GQ    S +
Sbjct: 111 TNNSAVLVKRAQQPGGKVYTFGLG--NRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWF 168

Query: 392 IPRKVSGQM-EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
            P+    +  +  +I+ I CG  HT A++  G L+ +G G++G LG GD S +  P  V 
Sbjct: 169 TPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVY 228

Query: 451 TLKEL----KTVMASCGVWHTAAIVEV---AGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
              E     K      G      +V     AG        S   L+TWG G  G+LG G 
Sbjct: 229 LGSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGH 288

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT- 562
               + P  V    D     V  G S +  +   G +++ GS  +G+LG  G  G+ P  
Sbjct: 289 NRGSLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGH-GDQGEIPVP 347

Query: 563 -RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALR 621
            ++EG      +  +ACG++H   ++ K  V+ WG G     G G++ +     + + L 
Sbjct: 348 RKVEG-FGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLS 406

Query: 622 DKQ--VKSVVCGSNFTAAICL 640
           D +  V ++  G   +AA+ +
Sbjct: 407 DIEAAVLNIAAGPYHSAAVTV 427



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 136/351 (38%), Gaps = 68/351 (19%)

Query: 348 SNIHMVACGEFHTCAVTLSGD---LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           +++  VA G +HT  V L GD   L+ WG    N+  LG   EI   +   +      + 
Sbjct: 46  ASVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNV--LGMGVEIRERVFPGLVPFFSKMG 103

Query: 405 ISSICCGPWHTAAITS-----AGKLFTFGDGTFGALGH------------GDRSS----- 442
              + CG  ++A +        GK++TFG G  G LG+            GD S      
Sbjct: 104 TFEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQED 163

Query: 443 -----TSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEG 497
                T  P  V    + K    SCG  HT A+ +               L+ WG G+ G
Sbjct: 164 GPSWFTPKPSRVRFRDKCKIARISCGADHTLALSD------------EGALYAWGVGSYG 211

Query: 498 QLGHGDAEPRVVPLCV------------------KVSDD---ISFCKVACGHSITIALTA 536
            LG GD      P+ V                  KV  D   ++ C     HS+  A T+
Sbjct: 212 NLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSM--ACTS 269

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
            G +++ G    G+LG   + G     +   I  R I  +  G  H A +  +  +YTWG
Sbjct: 270 DGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWG 329

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
            G  G+LGHGD      P  VE      V  V CG+  T A+  HKG   A
Sbjct: 330 SGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALT-HKGTVFA 379



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 115/474 (24%), Positives = 172/474 (36%), Gaps = 126/474 (26%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG GL  G   G     E  S       +PK L S +     +IA G  H+  VT
Sbjct: 375 GTVFAWGAGLALGFGEG-----EDGSGGM--VAVPKHL-SDIEAAVLNIAAGPYHSAAVT 426

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLI----------------------------DA 344
             G +  WG G   +LGHG + +  +PK +                            D 
Sbjct: 427 VGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDV 486

Query: 345 LN-----GSN-----IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
           L+     G+N     +  + CGE HT A+T +G ++ WG        LG+  E   + P 
Sbjct: 487 LDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPV 546

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           K+  +     I  I CG  H  A+   G +F +G    G LG G    +  P  V  L++
Sbjct: 547 KL--ECFSTPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQ 604

Query: 455 LKTVMASCGVWHTAAIVEVAG--KTSGSNGLSSKKLFTWGDGAEGQLGHGD-------AE 505
              V   CG  ++A I  + G    SG  G     L+ WG    G+LG G+         
Sbjct: 605 AVDVF--CGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILT 662

Query: 506 PR----VVPLCVKVSDD-----------ISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           P+     VP+C    D            +SF  +  G S ++A+TA G+ ++ G+  YG+
Sbjct: 663 PQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGR 722

Query: 551 LGSPGSTGKF-PTR---------------------------------------------- 563
           LG   +   + PTR                                              
Sbjct: 723 LGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFWGRREDTCSTTNYMSP 782

Query: 564 -----IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                +EG      ++ I+    H   V+   EV+ WG     Q G G  + ++
Sbjct: 783 RIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAER 836



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 149/379 (39%), Gaps = 89/379 (23%)

Query: 251 GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE--STVVLDAQSIACGSKHA 308
           G G V++WG    +G LG       +      D   P  LE  ST +   + IACGSKH 
Sbjct: 517 GAGAVWVWGSN-DDGQLG-------LGEDVEEDQYEPVKLECFSTPI---RRIACGSKHC 565

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE-FHTCAVTLSG 367
           + V + G +F+WG    G+LG GV      P  + AL       V CG+ +  C  +L G
Sbjct: 566 LAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR--QAVDVFCGDDYSACITSLGG 623

Query: 368 -------------DLYTWGDGIHN-LGLLGQVSEISHWIPRKV------------SGQME 401
                        DL+ WG      LGL   V+  S   P+KV            S +M+
Sbjct: 624 AQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQ 683

Query: 402 GLQ------ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
             +       S +C G  H+ AIT+ G+ + +G G +G LG G  ++   P   +  K +
Sbjct: 684 AYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGV 743

Query: 456 KTVMASCGVWHTAAIV-----------------------EVAGKTSGSNGLSSKK----- 487
           +    + G  H+ A+                         +  +  G  G+   K     
Sbjct: 744 RLRSVAAGACHSLALSMDGDLWFWGRREDTCSTTNYMSPRIFMQLEGQGGVPKVKSISAS 803

Query: 488 ------------LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK-VACGHSITIAL 534
                       +F WGD    Q G G  +   +    +V+   S C+ VA G   +  +
Sbjct: 804 ERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAERLDRPERVAGLPSACQWVATGPQGSFFI 863

Query: 535 TATGQVFSMGSADYGQLGS 553
            A+G+VF+ G    G+LG+
Sbjct: 864 LASGEVFAAGVIKSGRLGT 882


>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
           scrofa]
          Length = 969

 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 174/355 (49%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 639 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 688

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 689 SRNIIKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 746

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 747 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 806

Query: 462 CGVW--HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 807 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 854

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 855 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 913

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P+ +  L  K +  + CG
Sbjct: 914 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPSALPGLDTKHIVGIACG 966



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 157/317 (49%), Gaps = 25/317 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 666 NGRVYTQAYNSDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 725

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 726 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 783

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPW--HTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 784 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 842

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 843 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 890

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P+
Sbjct: 891 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPS 950

Query: 563 RIEGNIKHRYIEDIACG 579
            + G +  ++I  IACG
Sbjct: 951 ALPG-LDTKHIVGIACG 966



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 163/329 (49%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 621 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---- 671

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEG--LQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
                   Q        P+ V G      ++I++   G  H  A+ + G+++++G G  G
Sbjct: 672 --------QAYNSDTLAPQLVQGLASRNIIKIAAHSDGH-HYLALAATGEVYSWGCGDGG 722

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 723 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 773

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 774 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 833

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 834 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 892

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 893 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 921



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 695 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 751

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 752 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 808

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 809 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 865

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 866 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 923



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 17/162 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 821 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 870

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 871 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 930

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
           G  D   +   L     ++   P  + G ++   I  I CGP
Sbjct: 931 GSNDQCQHFDTL----RVTKPEPSALPG-LDTKHIVGIACGP 967


>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2440

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGTQEKI----------LQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + D++ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  A+                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A       T G       ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646


>gi|401413264|ref|XP_003886079.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
 gi|325120499|emb|CBZ56053.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
          Length = 1765

 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 187/419 (44%), Gaps = 71/419 (16%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G ++ WG G GNG LG   N         R +L P V++  +  D   ++ G  H+  + 
Sbjct: 271 GTLWTWGHG-GNGRLGLGHN---------RGSLSPAVVDYILDRDVVFVSAGDSHSACID 320

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           +QG +++WG G  G+LGHG + ++  P+ ++   G  +  VACG FHT A+T  G ++ W
Sbjct: 321 RQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAW 380

Query: 373 GDGIHNLGLLGQVSEISHW-IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           G G+      G+        +P+ +S  +E + + ++  GP+H+AA+T  G L  +G G 
Sbjct: 381 GAGLALGLGEGEDGGGGMVTVPKHLS-DIE-VAVLNVAAGPYHSAAVTVGGDLLVWGVGG 438

Query: 432 FGALGHGDRSSTSVPREVETLK------ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
              LGHGD+ +   P+ V  L+      +L++++    +    +  +V G+   S G + 
Sbjct: 439 SSRLGHGDQQNQPFPKYVADLRNRMYVADLQSMLGVSRLRRDYSDFDVLGE---SAGGAG 495

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
                W                            +   + CG + T+ALT TG V+  GS
Sbjct: 496 ANAAAW----------------------------TLQSLGCGENHTVALTGTGAVWVWGS 527

Query: 546 ADYGQLG----------SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
            D GQLG           P     F T          I  IACGS H   V+   +V+ W
Sbjct: 528 NDEGQLGLGEQVEEDQYEPVKLDCFSTP---------IRRIACGSKHCLAVAQYGDVFAW 578

Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSG 654
           G   +GQLG G       P  V ALR  Q   V CG +++A I  + G      ++ SG
Sbjct: 579 GANDDGQLGLGVLRPSFEPAAVTALR--QAIDVFCGDDYSACITSNGGAQTVSLALESG 635



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 196/471 (41%), Gaps = 93/471 (19%)

Query: 233 LSSAVSSSSQGSCHED-FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE 291
           L   V   S G  H    D  G ++ WG G G G LG           D+ +  +P+ +E
Sbjct: 302 LDRDVVFVSAGDSHSACIDRQGVLYTWGSG-GFGRLG---------HGDQGEIPVPRKVE 351

Query: 292 STVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD---VSYPKLIDALNGS 348
               +    +ACG+ H + +T +G +F+WG G    LG G +     V+ PK +  +  +
Sbjct: 352 GFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGMVTVPKHLSDIEVA 411

Query: 349 NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG---------- 398
            ++ VA G +H+ AVT+ GDL  WG G      LG   + +   P+ V+           
Sbjct: 412 VLN-VAAGPYHSAAVTVGGDLLVWGVG--GSSRLGHGDQQNQPFPKYVADLRNRMYVADL 468

Query: 399 -QMEGLQ---------------------------ISSICCGPWHTAAITSAGKLFTFGDG 430
             M G+                            + S+ CG  HT A+T  G ++ +G  
Sbjct: 469 QSMLGVSRLRRDYSDFDVLGESAGGAGANAAAWTLQSLGCGENHTVALTGTGAVWVWGSN 528

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVM--ASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
             G LG G++        V+ L    T +   +CG  H  A+ +               +
Sbjct: 529 DEGQLGLGEQVEEDQYEPVK-LDCFSTPIRRIACGSKHCLAVAQYG------------DV 575

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKV---------SDDISFCKVACGHSITIAL----- 534
           F WG   +GQLG G   P   P  V            DD S C  + G + T++L     
Sbjct: 576 FAWGANDDGQLGLGVLRPSFEPAAVTALRQAIDVFCGDDYSACITSNGGAQTVSLALESG 635

Query: 535 TATGQVFSMGSADYGQLG-----SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
           T  G +++ G+A+ G+LG     + GS    P ++  ++    +   + G+ H   ++++
Sbjct: 636 TEFGDLWTWGAAESGKLGLGEDVASGSILT-PQKVPFSVP---VCACSLGTSHALAITAR 691

Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            E Y WG G  G+LG G   N   PT  +  +  +++SV  G++ + A+ +
Sbjct: 692 GECYAWGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAGASHSLALSM 742



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 165/383 (43%), Gaps = 45/383 (11%)

Query: 299 QSIACGSKHAVLVTKQG---QIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVA 354
           + +A G  H ++V  +G   Q+ +WG+     LG GVE  +  +P L+   +   +  V+
Sbjct: 49  KRVALGLYHTLVVGLKGDQPQLLAWGKNYNNVLGLGVETRERVFPGLVPFFSRHGVFEVS 108

Query: 355 CGEFHTCAVTL-----SGDLYTWGDGIHNLGLL--------------------GQVSEIS 389
           CG  ++  +        G +YT+G G  N G L                    GQ    S
Sbjct: 109 CGTNNSAVLVKRAQQSGGKVYTFGLG--NRGRLGYPKSKAEGGARQQGDDAGDGQEDGPS 166

Query: 390 HWIPRKVSGQM-EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPRE 448
            + P+    +  +  +I+ I CG  HT A++  G L+ +G G++G LG GD S    P  
Sbjct: 167 WFTPKPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDTSDAYSPVR 226

Query: 449 VETLKE----LKTVMASCGVWHTAAIVEV---AGKTSGSNGLSSKKLFTWGDGAEGQLGH 501
           V    E     K      G   T  +V     AG        S   L+TWG G  G+LG 
Sbjct: 227 VLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGL 286

Query: 502 GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFP 561
           G     + P  V    D     V+ G S +  +   G +++ GS  +G+LG  G  G+ P
Sbjct: 287 GHNRGSLSPAVVDYILDRDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGH-GDQGEIP 345

Query: 562 T--RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
              ++EG      +  +ACG++H   ++ K  V+ WG G    LG G++      T+ + 
Sbjct: 346 VPRKVEG-FGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGMVTVPKH 404

Query: 620 LRDKQVK--SVVCGSNFTAAICL 640
           L D +V   +V  G   +AA+ +
Sbjct: 405 LSDIEVAVLNVAAGPYHSAAVTV 427



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 142/359 (39%), Gaps = 72/359 (20%)

Query: 342 IDALNGSNIHMVACGEFHTCAVTLSGD---LYTWGDGIHN-LGLLGQVSEISHWIPRKVS 397
           I  L  +++  VA G +HT  V L GD   L  WG   +N LGL  +  E      R   
Sbjct: 40  IARLGPTSVKRVALGLYHTLVVGLKGDQPQLLAWGKNYNNVLGLGVETRE------RVFP 93

Query: 398 GQMEGLQ---ISSICCGPWHTAAIT-----SAGKLFTFGDGTFGALGH------------ 437
           G +       +  + CG  ++A +      S GK++TFG G  G LG+            
Sbjct: 94  GLVPFFSRHGVFEVSCGTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQQ 153

Query: 438 GDRSS----------TSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           GD +           T  P  V    + K    SCG  HT A+         S+G     
Sbjct: 154 GDDAGDGQEDGPSWFTPKPARVRFRDKCKIARISCGADHTLAL---------SDG---GA 201

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKV-------------------SDDISFCKVACGH 528
           L+ WG G+ G LG GD      P+ V +                   +D +     A G 
Sbjct: 202 LYAWGVGSYGNLGQGDTSDAYSPVRVLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGA 261

Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
             ++A T+ G +++ G    G+LG   + G     +   I  R +  ++ G  H A +  
Sbjct: 262 KHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDVVFVSAGDSHSACIDR 321

Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
           +  +YTWG G  G+LGHGD      P  VE      V  V CG+  T A+  HKG   A
Sbjct: 322 QGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALT-HKGTVFA 379



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 140/359 (38%), Gaps = 71/359 (19%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACG 356
           QS+ CG  H V +T  G ++ WG    G+LG G  VE D   P  +D  + + I  +ACG
Sbjct: 504 QSLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFS-TPIRRIACG 562

Query: 357 EFHTCAVTLSGDLYTWG---DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
             H  AV   GD++ WG   DG   LG+L    E     P  V+   + +    + CG  
Sbjct: 563 SKHCLAVAQYGDVFAWGANDDGQLGLGVLRPSFE-----PAAVTALRQAI---DVFCGDD 614

Query: 414 HTAAITS----------------AGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELK 456
           ++A ITS                 G L+T+G    G LG G D +S S+    +    + 
Sbjct: 615 YSACITSNGGAQTVSLALESGTEFGDLWTWGAAESGKLGLGEDVASGSILTPQKVPFSVP 674

Query: 457 TVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
               S G  H  AI             +  + + WG G  G+LG G       P      
Sbjct: 675 VCACSLGTSHALAIT------------ARGECYAWGAGYYGRLGIGTTANAYAPTKCDFP 722

Query: 517 DDISFCKVACGHSITIALTATGQVFSMGSAD-------------YGQLGSPGSTGKFPTR 563
             +    VA G S ++AL+  G ++  G  +             + QL SP    K    
Sbjct: 723 KGVRIRSVAAGASHSLALSMDGDLWIWGKKEDTCSTTNYNSPRIFMQLESPSGVPK---- 778

Query: 564 IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQT--PTLVEAL 620
                    ++ IA   +H   V+   EV+ WG     Q G G  + ++   P ++  L
Sbjct: 779 ---------VKSIAAAEHHSLAVTETGEVFAWGDNKLYQTGCGKRQAERLDRPEMIAGL 828



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 95/206 (46%), Gaps = 32/206 (15%)

Query: 252 LGDVFIWGE------GLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGS 305
            GD++ WG       GLG  +  G++             L P+ +  +V + A S+  G+
Sbjct: 638 FGDLWTWGAAESGKLGLGEDVASGSI-------------LTPQKVPFSVPVCACSL--GT 682

Query: 306 KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTL 365
            HA+ +T +G+ ++WG G  G+LG G  A+   P   D   G  I  VA G  H+ A+++
Sbjct: 683 SHALAITARGECYAWGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAGASHSLALSM 742

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG----LQISSICCGPWHTAAITSA 421
            GDL+ WG            S  ++  PR +  Q+E      ++ SI     H+ A+T  
Sbjct: 743 DGDLWIWGKKEDT------CSTTNYNSPR-IFMQLESPSGVPKVKSIAAAEHHSLAVTET 795

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPR 447
           G++F +GD      G G R +  + R
Sbjct: 796 GEVFAWGDNKLYQTGCGKRQAERLDR 821



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 151/370 (40%), Gaps = 76/370 (20%)

Query: 251 GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE--STVVLDAQSIACGSKHA 308
           G G V++WG     G LG       +      D   P  L+  ST +   + IACGSKH 
Sbjct: 518 GTGAVWVWGSN-DEGQLG-------LGEQVEEDQYEPVKLDCFSTPI---RRIACGSKHC 566

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG- 367
           + V + G +F+WG    G+LG GV      P  + AL  +    V CG+ ++  +T +G 
Sbjct: 567 LAVAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTALRQAID--VFCGDDYSACITSNGG 624

Query: 368 ---------------DLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCG 411
                          DL+TWG      LGL   V+  S   P+KV   +    + +   G
Sbjct: 625 AQTVSLALESGTEFGDLWTWGAAESGKLGLGEDVASGSILTPQKVPFSVP---VCACSLG 681

Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI- 470
             H  AIT+ G+ + +G G +G LG G  ++   P + +  K ++    + G  H+ A+ 
Sbjct: 682 TSHALAITARGECYAWGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAGASHSLALS 741

Query: 471 ----VEVAGK---TSGSNGLSSKKLFT--------------------------------W 491
               + + GK   T  +   +S ++F                                 W
Sbjct: 742 MDGDLWIWGKKEDTCSTTNYNSPRIFMQLESPSGVPKVKSIAAAEHHSLAVTETGEVFAW 801

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK-VACGHSITIALTATGQVFSMGSADYGQ 550
           GD    Q G G  +   +     ++   + C+ VA G   +  +  +G+V++ G  + G+
Sbjct: 802 GDNKLYQTGCGKRQAERLDRPEMIAGLPNVCQWVATGPQASFFVLCSGEVYAAGVINGGR 861

Query: 551 LGSPGSTGKF 560
           LG+  S  K+
Sbjct: 862 LGTGWSKRKY 871


>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 3089

 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 189/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G    +          L PK+  +    DAQ+I  G     +++ 
Sbjct: 383 EVYVWGSNSSHQLVEGTQEKI----------LQPKL--AATFADAQTIEAGQYCTFVISS 430

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +       I  V+     + HT A T  G+++
Sbjct: 431 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFTTEGEVF 490

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA++  G+L+T+G+G
Sbjct: 491 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEG 548

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 549 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 595

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  V+    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 596 FGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 655

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE     R + DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 656 CGSSEATALRPKLIEELATTRVV-DISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 714

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 715 PITKPKKVVGLDGVAIQQISAGTSHSLA 742



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 149/295 (50%), Gaps = 28/295 (9%)

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           ++Y WG    +  + G   +I   +  K++      Q  +I  G + T  I+S G +   
Sbjct: 383 EVYVWGSNSSHQLVEGTQEKI---LQPKLAATFADAQ--TIEAGQYCTFVISSDGSVRAC 437

Query: 428 GDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV-WHTAAIVEVAGKTSGSNGLS 484
           G G++G LG GD ++ S  +++  E  + +K V +S G   HT A       T G     
Sbjct: 438 GKGSYGRLGLGDSNNQSTLKKLTFEPHRAIKKVSSSKGSDGHTLAFT-----TEG----- 487

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISFCKVACGHSITIALTATGQVFS 542
             ++F+WGDG  G+LGHG++  +  P  ++  +   +  C V+ G+  + A++  G++++
Sbjct: 488 --EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVC-VSAGYRHSAAVSEDGELYT 544

Query: 543 MGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
            G  D+G+LG   S  +  PT ++ +I +  + +++CGS H IA+      V+++G G N
Sbjct: 545 WGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGSSHTIALSKDGRTVWSFGGGDN 601

Query: 601 GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGC 655
           G+LGHGD      P +VEAL+   ++ V  GS  + A+     V       C GC
Sbjct: 602 GKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGC 656


>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
          Length = 1050

 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 105/325 (32%), Positives = 165/325 (50%), Gaps = 20/325 (6%)

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG 356
           + + +ACG  H+V + + G++++ G  + G+LGH  E   S P+ I AL G +I  VACG
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHDCEG--SKPEQIGALAGQHIVHVACG 92

Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVS-EISHWIPRKVSGQMEGLQISSICCGPWHT 415
           E H+ A++  G L++WG G  + G LG  + E +  +PR +  ++    I  + CG WH 
Sbjct: 93  ESHSLALSDQGQLFSWGAG--SDGQLGLTTIEDAVTVPRLIK-KLNQQTILQVSCGNWHC 149

Query: 416 AAITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            A+ + G+ FT+G  ++G LG G    S + P+ V++L  +     + G  H+ A+    
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFAL---- 205

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
              SG+       +F WG  + GQLG  D   R  P  VK+        ++CG   T  L
Sbjct: 206 -SLSGA-------VFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257

Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVY 593
           T +G VF+ G+   GQLG      +   R    +    +  IACG +H +A V S   +Y
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIY 317

Query: 594 TWGKGANGQLGHGDNENKQTPTLVE 618
            +G G  GQLG G   N + P+ V+
Sbjct: 318 AFGCGTRGQLGTGHTCNVKCPSPVK 342



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 165/336 (49%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGK--LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+  +G  ++  V  P++   ++  N+  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYSSFGQPGIGSNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E S   P ++ G + G  I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -LNTKGQLGHDCEGSK--PEQI-GALAGQHIVHVACGESHSLALSDQGQLFSWGAGSDGQ 115

Query: 435 LGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      + +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLTTIEDAVTVPRLIKKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGQ 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  VK  D I   +VA G + + AL+ +G VF  G    GQLG
Sbjct: 164 NSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDERDRESPCHVK-LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG + T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYA 318



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 123/251 (49%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG       I  A     L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLGLTT----IEDAVTVPRLIKKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L+G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   ++ G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 WGK--NSSGQLGLSDERDRESPCHVK-LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVP-----------SSGMIYAF 319

Query: 492 GDGAEGQLGHG 502
           G G  GQLG G
Sbjct: 320 GCGTRGQLGTG 330



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 4/165 (2%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+ ++S   +    +A G  H+  ++  G +F WG+ S G+LG   E D   P  +  L 
Sbjct: 181 PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLR 240

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
              +  ++CGE HT  +T SG ++T+G G  + G LG  S      PR+V  ++ G ++S
Sbjct: 241 SQKVVYISCGEEHTAVLTKSGGVFTFGAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVS 297

Query: 407 SICCGPWHTAA-ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
            I CG  HT A + S+G ++ FG GT G LG G   +   P  V+
Sbjct: 298 QIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342


>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 186/394 (47%), Gaps = 42/394 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 610 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 716

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG--SNF 634
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG   +F
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSF 774

Query: 635 TAAICLHKGVSIADH---SICSGCRNQFNFRRRR 665
             + C    + +       ICS    Q +   R+
Sbjct: 775 AWSSCSEWSIGLRVPFVVDICSMTFEQLDLLLRQ 808



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 162/336 (48%), Gaps = 28/336 (8%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 469 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 528

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 529 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 586

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 587 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 693

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 753

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            + G +  ++I  IACG       SS SE   W  G
Sbjct: 754 ALPG-LDTKHIVGIACGPAQSFAWSSCSE---WSIG 785



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
              L             P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 479 SDTLA------------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 526 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 577 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 637 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 695

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 554

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 555 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 668

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 673

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 734 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 778


>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii VEG]
          Length = 1205

 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 195/428 (45%), Gaps = 73/428 (17%)

Query: 226 ADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDAL 285
           AD   ++  SA +  S  +C  D    G ++ WG G GNG LG   N         R +L
Sbjct: 249 ADPVIVTCCSAGAKHSM-ACTSD----GTLWTWGHG-GNGRLGLGHN---------RGSL 293

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
            P V++  +  D   +  G  H+  + +QG +++WG G  G+LGHG + ++  P+ ++  
Sbjct: 294 SPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKVEGF 353

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGI---HNLGLLGQVSEISHWIPRKVSGQMEG 402
            G  +  VACG FHT A+T  G ++ WG G+      G  G    ++  +P+ +S  +E 
Sbjct: 354 GGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVA--VPKHLS-DIEA 410

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE---LKTVM 459
             + +I  GP+H+AA+T  G L  +G G    LGHGD+ +   P+ V  L+    +  + 
Sbjct: 411 -AVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQ 469

Query: 460 ASCGV------WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
           +  GV      +    +++V G TSG+N  S      W                      
Sbjct: 470 SMLGVSRLKREYSDLDVLDVPG-TSGTNQSS------W---------------------- 500

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK---FPTRIEGNIKH 570
                 +   + CG S TIALT  G V+  GS D GQLG      +    P ++E     
Sbjct: 501 ------TLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLE--CFS 552

Query: 571 RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
             I  IACGS H   V+   +V+ WG   NGQLG G       P  V ALR  Q   V C
Sbjct: 553 TPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR--QAVDVFC 610

Query: 631 GSNFTAAI 638
           G +++A I
Sbjct: 611 GDDYSACI 618



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 187/421 (44%), Gaps = 72/421 (17%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           +F WG+   N +LG    GVEI     R+ + P ++     +    ++CG+ ++ ++ K+
Sbjct: 70  LFGWGKNYSN-VLG---MGVEI-----RERVFPGLVPFFSKMGTFEVSCGTNNSAVLVKR 120

Query: 315 -----GQIFSWGEGSGGKLGH---------GVEADVS-------------YPKLIDALNG 347
                G+++++G G+ G+LG+         G + D S              P  +   + 
Sbjct: 121 AQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWFTPKPSRVRFRDK 180

Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---------- 397
             I  ++CG  HT A++  G LY WG G +  G LGQ      + P +V           
Sbjct: 181 CKIARISCGADHTLALSDEGALYAWGVGSY--GNLGQGDTSDSYTPVRVYLGSEAGSGKK 238

Query: 398 ------GQMEGLQISSICC--GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV 449
                 G++    +   CC  G  H+ A TS G L+T+G G  G LG G    +  P  V
Sbjct: 239 KENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVV 298

Query: 450 ETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV 509
           + + +   V  + G  H+A I                 L+TWG G  G+LGHGD     V
Sbjct: 299 DYILDRDIVFVNAGDSHSACIDR------------QGVLYTWGSGGFGRLGHGDQGEIPV 346

Query: 510 PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA---DYGQLGSPGSTGKFPTRIEG 566
           P  V+    +   +VACG   T+ALT  G VF+ G+     +G+ G  GS G        
Sbjct: 347 PRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGFGE-GEDGSGGMVAVPKHL 405

Query: 567 NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVK 626
           +     + +IA G YH A V+   ++  WG G + +LGHGD +N+  P  V  LR++   
Sbjct: 406 SDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYV 465

Query: 627 S 627
           S
Sbjct: 466 S 466



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 111/469 (23%), Positives = 191/469 (40%), Gaps = 104/469 (22%)

Query: 249 FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            D  G ++ WG G G G LG           D+ +  +P+ +E    +    +ACG+ H 
Sbjct: 319 IDRQGVLYTWGSG-GFGRLG---------HGDQGEIPVPRKVEGFGGVPVLQVACGTFHT 368

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEAD---VSYPKLIDALNGSNIHMVACGEFHTCAVTL 365
           + +T +G +F+WG G     G G +     V+ PK +  +  + ++ +A G +H+ AVT+
Sbjct: 369 LALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLSDIEAAVLN-IAAGPYHSAAVTV 427

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS------------------- 406
            GDL  WG G  +   LG   + +   P+ V+     + +S                   
Sbjct: 428 GGDLLVWGVGGSSR--LGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLD 485

Query: 407 ------------------SICCGPWHTAAITSAGKLFTFGDGTFGALGHGD--RSSTSVP 446
                             S+ CG  HT A+T AG ++ +G    G LG G+        P
Sbjct: 486 VLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEP 545

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP 506
            ++E        +A CG  H  A+ +               +F WG    GQLG G   P
Sbjct: 546 VKLECFSTPIRRIA-CGSKHCLAVAQYG------------DVFAWGANDNGQLGLGVVRP 592

Query: 507 RVVPLCVKV---------SDDISFCKVACGHSITIAL---TATGQVFSMGSADYGQLG-- 552
              P  V            DD S C  + G + +++    T  G +++ G+A+ G+LG  
Sbjct: 593 SFEPAAVTALRQAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLG 652

Query: 553 ---SPGSTGKFPTRIE----------GNIKHRYIEDIAC--------GSYHIAVVSSKSE 591
              + GS    P ++            +++ +  + + C        G+ H   ++++ E
Sbjct: 653 EDVASGSI-LTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGE 711

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            Y WG G  G+LG G   N  TPT  +  +  +++SV  G+  + A+ +
Sbjct: 712 CYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSM 760



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 162/381 (42%), Gaps = 45/381 (11%)

Query: 301 IACGSKHAVLVTKQG---QIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACG 356
           +A G  H ++V  +G   Q+F WG+     LG GVE  +  +P L+   +      V+CG
Sbjct: 51  VALGLYHTLVVGLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVPFFSKMGTFEVSCG 110

Query: 357 EFHTCAVTL-----SGDLYTWGDGIHNLGLL--------------------GQVSEISHW 391
             ++  +        G +YT+G G  N G L                    GQ    S +
Sbjct: 111 TNNSAVLVKRAQQPGGKVYTFGLG--NRGRLGYPKNKADGVAGYQGDFSGDGQEDGPSWF 168

Query: 392 IPRKVSGQM-EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
            P+    +  +  +I+ I CG  HT A++  G L+ +G G++G LG GD S +  P  V 
Sbjct: 169 TPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVY 228

Query: 451 TLKEL-----KTVMASCGVWHTAAIVEV--AGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
              E      K  +    V     IV    AG        S   L+TWG G  G+LG G 
Sbjct: 229 LGSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGH 288

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT- 562
               + P  V    D     V  G S +  +   G +++ GS  +G+LG  G  G+ P  
Sbjct: 289 NRGSLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGH-GDQGEIPVP 347

Query: 563 -RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALR 621
            ++EG      +  +ACG++H   ++ K  V+ WG G     G G++ +     + + L 
Sbjct: 348 RKVEG-FGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLS 406

Query: 622 DKQ--VKSVVCGSNFTAAICL 640
           D +  V ++  G   +AA+ +
Sbjct: 407 DIEAAVLNIAAGPYHSAAVTV 427



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 136/351 (38%), Gaps = 68/351 (19%)

Query: 348 SNIHMVACGEFHTCAVTLSGD---LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           +++  VA G +HT  V L GD   L+ WG    N+  LG   EI   +   +      + 
Sbjct: 46  ASVKRVALGLYHTLVVGLKGDQPQLFGWGKNYSNV--LGMGVEIRERVFPGLVPFFSKMG 103

Query: 405 ISSICCGPWHTAAITS-----AGKLFTFGDGTFGALGH------------GDRSS----- 442
              + CG  ++A +        GK++TFG G  G LG+            GD S      
Sbjct: 104 TFEVSCGTNNSAVLVKRAQQPGGKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDGQED 163

Query: 443 -----TSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEG 497
                T  P  V    + K    SCG  HT A+ +               L+ WG G+ G
Sbjct: 164 GPSWFTPKPSRVRFRDKCKIARISCGADHTLALSD------------EGALYAWGVGSYG 211

Query: 498 QLGHGDAEPRVVPLCV------------------KVSDD---ISFCKVACGHSITIALTA 536
            LG GD      P+ V                  KV  D   ++ C     HS+  A T+
Sbjct: 212 NLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSM--ACTS 269

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
            G +++ G    G+LG   + G     +   I  R I  +  G  H A +  +  +YTWG
Sbjct: 270 DGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWG 329

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
            G  G+LGHGD      P  VE      V  V CG+  T A+  HKG   A
Sbjct: 330 SGGFGRLGHGDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALT-HKGTVFA 379



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 115/474 (24%), Positives = 172/474 (36%), Gaps = 126/474 (26%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG GL  G   G     E  S       +PK L S +     +IA G  H+  VT
Sbjct: 375 GTVFAWGAGLALGFGEG-----EDGSGGM--VAVPKHL-SDIEAAVLNIAAGPYHSAAVT 426

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLI----------------------------DA 344
             G +  WG G   +LGHG + +  +PK +                            D 
Sbjct: 427 VGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDV 486

Query: 345 LN-----GSN-----IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
           L+     G+N     +  + CGE HT A+T +G ++ WG        LG+  E   + P 
Sbjct: 487 LDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPV 546

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           K+  +     I  I CG  H  A+   G +F +G    G LG G    +  P  V  L++
Sbjct: 547 KL--ECFSTPIRRIACGSKHCLAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQ 604

Query: 455 LKTVMASCGVWHTAAIVEVAG--KTSGSNGLSSKKLFTWGDGAEGQLGHGD-------AE 505
              V   CG  ++A I  + G    SG  G     L+ WG    G+LG G+         
Sbjct: 605 AVDVF--CGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILT 662

Query: 506 PR----VVPLCVKVSDD-----------ISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           P+     VP+C    D            +SF  +  G S ++A+TA G+ ++ G+  YG+
Sbjct: 663 PQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGR 722

Query: 551 LGSPGSTGKF-PTR---------------------------------------------- 563
           LG   +   + PTR                                              
Sbjct: 723 LGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFWGRREDTCSTTNYMSP 782

Query: 564 -----IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                +EG      ++ I+    H   V+   EV+ WG     Q G G  + ++
Sbjct: 783 RIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAER 836



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 149/379 (39%), Gaps = 89/379 (23%)

Query: 251 GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE--STVVLDAQSIACGSKHA 308
           G G V++WG    +G LG       +      D   P  LE  ST +   + IACGSKH 
Sbjct: 517 GAGAVWVWGSN-DDGQLG-------LGEDVEEDQYEPVKLECFSTPI---RRIACGSKHC 565

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE-FHTCAVTLSG 367
           + V + G +F+WG    G+LG GV      P  + AL       V CG+ +  C  +L G
Sbjct: 566 LAVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALR--QAVDVFCGDDYSACITSLGG 623

Query: 368 -------------DLYTWGDGIHN-LGLLGQVSEISHWIPRKV------------SGQME 401
                        DL+ WG      LGL   V+  S   P+KV            S +M+
Sbjct: 624 AQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQ 683

Query: 402 GLQ------ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
             +       S +C G  H+ AIT+ G+ + +G G +G LG G  ++   P   +  K +
Sbjct: 684 AYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGV 743

Query: 456 KTVMASCGVWHTAAIV-----------------------EVAGKTSGSNGLSSKK----- 487
           +    + G  H+ A+                         +  +  G  G+   K     
Sbjct: 744 RLRSVAAGACHSLALSMDGDLWFWGRREDTCSTTNYMSPRIFMQLEGQGGVPKVKSISAS 803

Query: 488 ------------LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK-VACGHSITIAL 534
                       +F WGD    Q G G  +   +    +V+   S C+ VA G   +  +
Sbjct: 804 ERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAERLDRPERVAGLPSACQWVATGPQGSFFI 863

Query: 535 TATGQVFSMGSADYGQLGS 553
            A+G+VF+ G    G+LG+
Sbjct: 864 LASGEVFAAGVIKSGRLGT 882


>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
          Length = 1017

 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/324 (33%), Positives = 164/324 (50%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   NI  VACGE
Sbjct: 83  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQNIVHVACGE 140

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  
Sbjct: 141 SHSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 197

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+ + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+     
Sbjct: 198 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 252

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             SG+       +F WG    GQLG  D E R  P  VK+        ++CG   T  LT
Sbjct: 253 SLSGA-------VFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 305

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
            +G VF+ G+   GQLG      +   R    +    +  IACG  H +A V S   +Y 
Sbjct: 306 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 365

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G GA GQLG G   N + P+ V+
Sbjct: 366 FGCGARGQLGTGHTCNVKCPSPVK 389



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 174/353 (49%), Gaps = 31/353 (8%)

Query: 305 SKHAVLVTKQGQIFSWGEGSGGKLGH---GVEAD----VSYPKLIDALNGSNIHMVACGE 357
           SK +VL +K+  I   G+ +G  LG    G+  +    V+ P++   ++  ++  VACG 
Sbjct: 34  SKMSVLNSKEKDI---GKENGNDLGASQPGISTNLRGIVAEPQVCGFISDRSVKEVACGG 90

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
            H+  +   G++YT G  ++  G LG   E +   P ++ G +    I  + CG  H+ A
Sbjct: 91  NHSVFLLEDGEVYTCG--LNTKGQLGHEREGNK--PEQI-GALADQNIVHVACGESHSLA 145

Query: 418 ITSAGKLFTFGDGTFGALG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           ++  G+LF++G G+ G LG      S +VPR ++ L +   +  SCG WH  A+      
Sbjct: 146 LSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA----- 200

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALT 535
                  +  + FTWG  + GQLG G   P +  P  V+  + I   +VA G + + AL+
Sbjct: 201 -------ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALS 253

Query: 536 ATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
            +G VF+ G  + GQLG S     + P  ++  ++ + +  I+CG  H AV++    V+T
Sbjct: 254 LSGAVFAWGMNNAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFT 312

Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
           +G G+ GQLGH    ++  P  V  L   +V  + CG   T A     G+  A
Sbjct: 313 FGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 365



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 127/251 (50%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 150 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 200

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 201 ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFA 260

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           W  G++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 261 W--GMNNAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 317

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 318 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 366

Query: 492 GDGAEGQLGHG 502
           G GA GQLG G
Sbjct: 367 GCGARGQLGTG 377



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 203 GQFFTWGKN-SHGQLG---LGKEFPSQAS-----PQRVRSLEGIPLAQVAAGGAHSFALS 253

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F+WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 254 LSGAVFAWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 313

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 314 GAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 370

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 371 RGQLGTGHTCNVKCPSPVK 389


>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
          Length = 2948

 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 173/355 (48%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 404 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 453

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 454 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 511

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 512 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 571

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 572 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 619

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 620 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 678

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 679 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 731



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 162/336 (48%), Gaps = 28/336 (8%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 431 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 490

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 491 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 548

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 549 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 607

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 608 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 655

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 656 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 715

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            + G +  ++I  IACG       SS SE   W  G
Sbjct: 716 ALPG-LDTKHIVGIACGPAQSFAWSSCSE---WSIG 747



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 386 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 440

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
              L             P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 441 SDTLA------------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 487

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 488 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 538

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 539 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 598

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 599 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 657

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 658 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 686



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 460 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 516

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 517 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 573

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 574 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 630

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 631 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 688



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 586 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 635

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 636 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 695

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 696 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 740


>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
 gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
          Length = 1050

 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 177/361 (49%), Gaps = 35/361 (9%)

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG 356
           + + +ACG  H+V + + G++++ G  + G+LGH  E++ S P+ I AL G +I  VACG
Sbjct: 35  NVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--ESEGSKPEPIGALAGQHIVHVACG 92

Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVS-EISHWIPRKVSGQMEGLQISSICCGPWHT 415
           E H+ A++  G +++WG G  + G LG  + E +  +PR +  ++    I  I CG WH 
Sbjct: 93  ESHSVALSDQGQVFSWGAG--SDGQLGLTTIEDAVTVPRLIK-KLNQQTILQISCGNWHC 149

Query: 416 AAITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            A+ + G+ FT+G  ++G LG G    S + P+ V++L  +     + G  H+ A+    
Sbjct: 150 LALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFAL---- 205

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
              SG+       +F WG  + GQLG  D   R  P  VK+        ++CG   T  L
Sbjct: 206 -SLSGA-------VFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257

Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVY 593
           T +G VF+ G+   GQLG      +   R    +    +  IACG +H +A V S   +Y
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIY 317

Query: 594 TWGKGANGQLGHGDNENKQTPTLV---------------EALRDKQVKSVVCGSNFTAAI 638
            +G G  GQLG G   N + P+ V               +A +   VK +  G + T  +
Sbjct: 318 AFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACKYHIVKHIFSGGDQTFVL 377

Query: 639 C 639
           C
Sbjct: 378 C 378



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 165/336 (49%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGK--LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+  +G  ++  +  P++   ++  N+  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG  SE S   P  + G + G  I  + CG  H+ A++  G++F++G G+ G 
Sbjct: 60  -LNTKGQLGHESEGSK--PEPI-GALAGQHIVHVACGESHSVALSDQGQVFSWGAGSDGQ 115

Query: 435 LGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      + +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLTTIEDAVTVPRLIKKLNQQTILQISCGNWHCLALA------------ADGQFFTWGQ 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  VK  D I   +VA G + + AL+ +G VF  G    GQLG
Sbjct: 164 NSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDERDRESPCHVK-LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG + T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVSQIACGRHHTLAFVPSSGMIYA 318



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 123/251 (49%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG G  +G LG       I  A     L+ K+ + T++     I+CG+ H + + 
Sbjct: 103 GQVFSWGAG-SDGQLGLTT----IEDAVTVPRLIKKLNQQTIL----QISCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L+G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   ++ G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 WGK--NSSGQLGLSDERDRESPCHVK-LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVP-----------SSGMIYAF 319

Query: 492 GDGAEGQLGHG 502
           G G  GQLG G
Sbjct: 320 GCGTRGQLGTG 330



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 97/199 (48%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+    G LG    G E  S        P+ ++S   +    +A G  H+  ++
Sbjct: 156 GQFFTWGQN-SYGQLG---LGKECPSQAS-----PQRVKSLDGIPLAQVAAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG+ S G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G ++S I CG  HT A + S+G ++ FG GT
Sbjct: 267 GAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVSQIACGRHHTLAFVPSSGMIYAFGCGT 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
          Length = 1677

 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 173/355 (48%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 433 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 482

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 483 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 540

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 541 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 600

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 601 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 648

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 649 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 707

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 708 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 760



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 162/336 (48%), Gaps = 28/336 (8%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGS--KHAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 460 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 519

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 520 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 577

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 578 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 636

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 637 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 684

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 685 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 744

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            + G +  ++I  IACG       SS SE   W  G
Sbjct: 745 ALPG-LDTKHIVGIACGPAQSFAWSSCSE---WSIG 776



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 415 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 469

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
              L             P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 470 SDTLA------------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 516

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 517 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 567

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 568 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 627

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 628 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 686

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 687 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 715



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 489 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 545

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 546 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 602

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 603 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 659

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 660 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 717



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 615 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 664

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 665 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 724

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 725 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 769


>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
          Length = 353

 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 99/296 (33%), Positives = 156/296 (52%), Gaps = 25/296 (8%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK-QGQIFSWGEGSGGKLGHGVE 333
           ++   D  D L+P VL         S+ CG+ H    ++ + Q++SWG G  G+LGHG  
Sbjct: 44  QLGHGDAEDRLVPTVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNS 103

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +DV  P+ + AL G  I  +ACG+ H  AVT++G++ +WG   +  G LG  +     +P
Sbjct: 104 SDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGR--NQNGQLGLGTTEDSLLP 161

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           +K+    E + +  I  G  HTAA+T  G L+ +G G +G LG GDR+   +P +V +++
Sbjct: 162 QKIQ-AFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVE 220

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
             K V+ +CG  HT  + +            S  L+T+G    GQLGHGD E  +VP  V
Sbjct: 221 GEKMVLVACGWRHTITVSD------------SGNLYTYGWSKYGQLGHGDFEDHLVPHKV 268

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG--------SPGSTGKFP 561
           +   D +  +++ G   T+ALT+ G+++  G   +GQ+G        SPG    FP
Sbjct: 269 EALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQV-SFP 323



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 164/337 (48%), Gaps = 30/337 (8%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P     TVVL    ++ G+ H+V +     + SWG G  G+LGHG   D   P ++   +
Sbjct: 8   PDSPPQTVVL----VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFD 63

Query: 347 GSNIHMVACGEFHTCAVTLSG-DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
              I  V CG  HT A +     +Y+WG G  + G LG  +    + P+ V   ++GL+I
Sbjct: 64  APAITSVICGADHTTAYSEDELQVYSWGWG--DFGRLGHGNSSDVFTPQPVK-ALQGLKI 120

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
             I CG  H  A+T AG++ ++G    G LG G    + +P++++  + +   M + G  
Sbjct: 121 KQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAE 180

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
           HTAA+ E               L+ WG G  G LG GD   R++P  V   +      VA
Sbjct: 181 HTAAVTE------------DGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVA 228

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-----PTRIEGNIKHRYIEDIACGS 580
           CG   TI ++ +G +++ G + YGQLG     G F     P ++E  +K   I  I+ G 
Sbjct: 229 CGWRHTITVSDSGNLYTYGWSKYGQLGH----GDFEDHLVPHKVEA-LKDSTISQISGGW 283

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLV 617
            H   ++S+ ++Y WG    GQ+G G+N++  +P  V
Sbjct: 284 RHTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQV 320



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 125/257 (48%), Gaps = 19/257 (7%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   +  D   P+ +++   L  + IACG  H + VT  G++ SWG    G+LG G   D
Sbjct: 98  LGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTED 157

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPR 394
              P+ I A     + M+A G  HT AVT  GDLY WG G + NLGL  +   +   +P 
Sbjct: 158 SLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRL---LPE 214

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           KVS  +EG ++  + CG  HT  ++ +G L+T+G   +G LGHGD     VP +VE LK+
Sbjct: 215 KVS-SVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKD 273

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
                 S G  HT A+             S  KL+ WG    GQ+G G+ +    P  V 
Sbjct: 274 STISQISGGWRHTMALT------------SEGKLYGWGWNKFGQVGVGNNDDHSSPGQVS 321

Query: 515 V--SDDISFCKVACGHS 529
              S+++  C     HS
Sbjct: 322 FPGSENLPGCMRMEAHS 338



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 135/288 (46%), Gaps = 16/288 (5%)

Query: 352 MVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCG 411
           +V+ G  H+ A+     L +WG G    G LG        +P  +SG  +   I+S+ CG
Sbjct: 17  LVSAGASHSVALLTGNVLCSWGRG--EDGQLGHGDAEDRLVPTVLSG-FDAPAITSVICG 73

Query: 412 PWHTAAITSAG-KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
             HT A +    +++++G G FG LGHG+ S    P+ V+ L+ LK    +CG  H  A 
Sbjct: 74  ADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLA- 132

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
           V +AG+             +WG    GQLG G  E  ++P  ++  + +    +A G   
Sbjct: 133 VTMAGEVQ-----------SWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEH 181

Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           T A+T  G ++  G   YG LG      +       +++   +  +ACG  H   VS   
Sbjct: 182 TAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMVLVACGWRHTITVSDSG 241

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            +YT+G    GQLGHGD E+   P  VEAL+D  +  +  G   T A+
Sbjct: 242 NLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMAL 289



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 91/183 (49%), Gaps = 13/183 (7%)

Query: 457 TVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
            V+ S G  H+ A+            L+   L +WG G +GQLGHGDAE R+VP  +   
Sbjct: 15  VVLVSAGASHSVAL------------LTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGF 62

Query: 517 DDISFCKVACGHSITIALTATG-QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIED 575
           D  +   V CG   T A +    QV+S G  D+G+LG   S+  F  +    ++   I+ 
Sbjct: 63  DAPAITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQ 122

Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           IACG  H   V+   EV +WG+  NGQLG G  E+   P  ++A     VK +  G+  T
Sbjct: 123 IACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHT 182

Query: 636 AAI 638
           AA+
Sbjct: 183 AAV 185



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 1/118 (0%)

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHI 583
           V+ G S ++AL     + S G  + GQLG   +  +    +        I  + CG+ H 
Sbjct: 18  VSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVICGADHT 77

Query: 584 AVVSSKS-EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              S    +VY+WG G  G+LGHG++ +  TP  V+AL+  ++K + CG +   A+ +
Sbjct: 78  TAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHCLAVTM 135


>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
          Length = 2984

 Score =  155 bits (393), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 173/355 (48%), Gaps = 37/355 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 433 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 482

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 483 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 540

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 541 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 600

Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
           CG     T A+ E        NG    ++++WGDG  G+LG G ++    P  ++   D+
Sbjct: 601 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 648

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
              KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A 
Sbjct: 649 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 707

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           GS H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 708 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 760



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 162/336 (48%), Gaps = 28/336 (8%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGS--KHAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 460 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 519

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 520 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 577

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 578 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 636

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 637 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 684

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 685 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 744

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            + G +  ++I  IACG       SS SE   W  G
Sbjct: 745 ALPG-LDTKHIVGIACGPAQSFAWSSCSE---WSIG 776



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 415 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 469

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
              L             P+ V G +    I  I       H  A+ + G+++++G G  G
Sbjct: 470 SDTLA------------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 516

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 517 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 567

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 568 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 627

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 628 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 686

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 687 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 715



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 489 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 545

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 546 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 602

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 603 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 659

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 660 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 717



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 615 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 664

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 665 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 724

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 725 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 769


>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
           rerio]
          Length = 4647

 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 184/387 (47%), Gaps = 32/387 (8%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           V++WG    + L  G +  +          L PK+ +     DAQ I  G      V+  
Sbjct: 372 VYVWGSNSSHQLAEGTLEKI----------LQPKLAQG--FSDAQMIEAGQYCTFSVSAD 419

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLYT 371
           G + + G+GS G+LG G   + S PK +       +  V+     + HT AVT  G++++
Sbjct: 420 GAVKACGKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFS 479

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WGDG  + G LG  +  +   P+ + G + G  +  +  G  H+AA+T+ G+L+T+G+G 
Sbjct: 480 WGDG--DYGKLGHGNSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGD 537

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           FG LGH D  S +VP  V+ +  +  V  +CG  HT A+ +             + ++++
Sbjct: 538 FGRLGHSDSHSRNVPTLVKDISGVGQV--ACGSSHTIAVAQ-----------DGRIVWSF 584

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           G G  G+LGHGD      P  ++        KV  G   ++ALT+ GQVF+ G       
Sbjct: 585 GGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGC 644

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
           GS  +T   P  IE  +    I DI+CG  H   +S ++EV+ WG  A GQ G G     
Sbjct: 645 GSSETTSLRPRLIE-ELSITKIIDISCGDSHCLALSHENEVFAWGNNAMGQCGQGHTSTP 703

Query: 612 QT-PTLVEALRDKQVKSVVCGSNFTAA 637
            T P  V  L    ++ +  G++ + A
Sbjct: 704 VTKPKKVIGLEGVSIQQITAGTSHSLA 730



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 151/330 (45%), Gaps = 50/330 (15%)

Query: 314  QGQIFSWGEGSGGKLGH-GVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            + +++ WG G  G+L   G  A V  P L  +L  S    V CG+  T  V  +G +   
Sbjct: 3859 KSEVYLWGNGRHGQLADAGTSASV--PTLAPSL--SQTQQVVCGQNCTFLVQANGTVLAV 3914

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCG---PWHTAAITSAGKLFTFGD 429
            G+G  + G LGQ +    + P  +S  ++G  ++ +        H+ A+T  G++F++GD
Sbjct: 3915 GEG--SYGRLGQGNSDDLYTPTIISA-LQGYVVTQLVTSYGSDGHSLALTETGEVFSWGD 3971

Query: 430  GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
            G +G LGHG+      P+++E L+  + V  +CG  H+A +             +  KLF
Sbjct: 3972 GDYGKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVT------------ADGKLF 4019

Query: 490  TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
            T+G G  G+LG      +++P  V   D         GH I       GQ          
Sbjct: 4020 TFGSGDSGRLGQRSTSNKMIPERVTALD---------GHHI-------GQRL-------- 4055

Query: 550  QLGSPGSTGKFPTR--IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
             +G P +  K   R  I   ++  +IEDIA G  HI  +S+  +VY WG     QLG G 
Sbjct: 4056 -IGLPDAMLKNHNRPQIIPALEGVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLGLGH 4114

Query: 608  NENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            +   + P LV  L+ K ++ +  G   ++A
Sbjct: 4115 SNPVKEPILVTTLQGKNIRQISAGRCHSSA 4144



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 147/294 (50%), Gaps = 28/294 (9%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +Y WG    +    G + +I    P+   G  +   I +   G + T ++++ G +   G
Sbjct: 372 VYVWGSNSSHQLAEGTLEKILQ--PKLAQGFSDAQMIEA---GQYCTFSVSADGAVKACG 426

Query: 429 DGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV-WHTAAIVEVAGKTSGSNGLSS 485
            G++G LG GD ++ S+P+++  E  + ++ V +S G   HT A+             + 
Sbjct: 427 KGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVT------------AE 474

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISFCKVACGHSITIALTATGQVFSM 543
            ++F+WGDG  G+LGHG++  +  P  ++  +   +  C V+ G+  + A+T  G++++ 
Sbjct: 475 GEVFSWGDGDYGKLGHGNSATQKYPKIIQGPLLGKVVVC-VSAGYRHSAAVTNDGELYTW 533

Query: 544 GSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANG 601
           G  D+G+LG   S  +  PT ++ +I    +  +ACGS H IAV      V+++G G NG
Sbjct: 534 GEGDFGRLGHSDSHSRNVPTLVK-DISG--VGQVACGSSHTIAVAQDGRIVWSFGGGDNG 590

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGC 655
           +LGHGD      P ++EAL    ++ V  GS  + A+     V       C GC
Sbjct: 591 KLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSSLALTSAGQVFAWGCGSCLGC 644



 Score = 88.6 bits (218), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 132/304 (43%), Gaps = 48/304 (15%)

Query: 214  GGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGL----GDVFIWGEGLGNGLLGG 269
            G L DA + +S       +L+ ++S + Q  C ++   L    G V   GEG   G LG 
Sbjct: 3871 GQLADAGTSASVP-----TLAPSLSQTQQVVCGQNCTFLVQANGTVLAVGEG-SYGRLGQ 3924

Query: 270  AVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG 329
                   +S D     +   L+  VV    +      H++ +T+ G++FSWG+G  GKLG
Sbjct: 3925 G------NSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGDGDYGKLG 3978

Query: 330  HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEIS 389
            HG       PK I+ L G  +  +ACG  H+  VT  G L+T+G G  + G LGQ S  +
Sbjct: 3979 HGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVTADGKLFTFGSG--DSGRLGQRSTSN 4036

Query: 390  HWIPRKVS-------GQ---------------------MEGLQISSICCGPWHTAAITSA 421
              IP +V+       GQ                     +EG+ I  I  G  H  A+++ 
Sbjct: 4037 KMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPALEGVFIEDIAVGCEHILALSNT 4096

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT--SG 479
            G ++ +G      LG G  +    P  V TL+       S G  H++A    A  T  SG
Sbjct: 4097 GDVYAWGCNCEAQLGLGHSNPVKEPILVTTLQGKNIRQISAGRCHSSAWTTPALSTRASG 4156

Query: 480  SNGL 483
             +G+
Sbjct: 4157 CSGI 4160



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 129/291 (44%), Gaps = 41/291 (14%)

Query: 423  KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +++ +G+G  G L     +S SVP    +L + + V+  CG  +   +V+  G       
Sbjct: 3861 EVYLWGNGRHGQLADAG-TSASVPTLAPSLSQTQQVV--CGQ-NCTFLVQANGT------ 3910

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC-----GHSITIALTAT 537
                 +   G+G+ G+LG G+++    P  +         ++       GHS+  ALT T
Sbjct: 3911 -----VLAVGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSL--ALTET 3963

Query: 538  GQVFSMGSADYGQLGSPGST-GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
            G+VFS G  DYG+LG   S   + P +IEG ++   +  +ACG  H AVV++  +++T+G
Sbjct: 3964 GEVFSWGDGDYGKLGHGNSERQRRPKQIEG-LQGEEVVQLACGFKHSAVVTADGKLFTFG 4022

Query: 597  KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG--------SNFTAAICLHKGVSIAD 648
             G +G+LG     NK  P  V AL    +   + G         N    I   +GV I D
Sbjct: 4023 SGDSGRLGQRSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPALEGVFIED 4082

Query: 649  HSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRV 699
              I  GC +            N G VY   C+ +  +    +  + +P  V
Sbjct: 4083 --IAVGCEHILALS-------NTGDVYAWGCNCEAQLGLGHSNPVKEPILV 4124


>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pongo abelii]
          Length = 1050

 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 107/324 (33%), Positives = 165/324 (50%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+ S G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+     
Sbjct: 151 ALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             SG+       +F WG    GQLG  D + R  P  VK+        ++CG   T  LT
Sbjct: 206 SLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
            +G VF+ G+  YGQLG      +   R    +    +  IACG  H +A V S   +Y 
Sbjct: 259 KSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G GA GQLG G   N + P+ V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 164/336 (48%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  ++  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -LNTKGQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             S  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------SDGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 128/251 (50%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 SDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           W  G++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 W--GMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           +G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 YGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA GQLG G
Sbjct: 320 GCGARGQLGTG 330



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG---LGKEFPSQAS-----PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 267 GAG--SYGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 35/165 (21%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGV 274
           G+  A   +  A SF +SLS                  G VF WG            N  
Sbjct: 189 GIPLAQVAAGGAHSFALSLS------------------GAVFGWGMN----------NAG 220

Query: 275 EISSADRRDALLP---KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG 331
           ++  +D +D   P   K+L +  V+    I+CG +H  ++TK G +F++G GS G+LGH 
Sbjct: 221 QLGLSDEKDRESPCHVKLLRTQKVV---YISCGEEHTAVLTKSGGVFTFGAGSYGQLGHD 277

Query: 332 VEADVSYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDG 375
              D   P+ +  L GS +  +ACG  HT A V  SG +Y +G G
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322


>gi|196012955|ref|XP_002116339.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
 gi|190580930|gb|EDV21009.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
          Length = 514

 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 188/370 (50%), Gaps = 37/370 (10%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLP---KVLESTVVLDAQSIACGSKHAVL 310
           +V++WG    N LL          +AD ++ L P   K+LE+   LD   IACG     +
Sbjct: 126 EVYVWGSKR-NLLL----------AADEKNPLEPDKSKLLEN---LDPSDIACGYDSLFV 171

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
           V++ G IF+ G+G  G LG G   DV+ P+ I  L    +  VA   G  H  A+T  G 
Sbjct: 172 VSRNGGIFACGKGHMGCLGLGNCDDVNVPRQIPQLLPVMVTTVAIHPGGRHAMALTAEGK 231

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +Y+WG G  + G LG  + + +  P  +  +++  +++ I CG  H+ A+ S GK+F++G
Sbjct: 232 VYSWGCG--DRGQLGHGNTLGYLDPTLID-ELKSKEVTKIACGAMHSIAVLSDGKIFSWG 288

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           DG+ GALGHG+  +  +P+++ +L     +  +CG  +T A+             +   +
Sbjct: 289 DGSNGALGHGNNLAQLLPKKIMSLNGKHIMAVACGECYTIAV-------------AGDDV 335

Query: 489 FTWGDGAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           ++WG G  G+LG+G   P   +P  ++         VACG++ + A++A G+V++ GS D
Sbjct: 336 WSWGLGGNGELGYGVEMPSYYMPTKIEALFFKGITNVACGYATSFAVSANGKVWAWGSGD 395

Query: 548 YGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +LG         P  I+G++K + I+ +    +H   +    +VY WG    G +G+ 
Sbjct: 396 RFRLGLGNEKVIVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQEIGPVGND 455

Query: 607 DNENKQTPTL 616
           ++  +Q   L
Sbjct: 456 EDAKQQQCML 465



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/273 (30%), Positives = 130/273 (47%), Gaps = 18/273 (6%)

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           ++Y WG       LL    E +   P K S  +E L  S I CG      ++  G +F  
Sbjct: 126 EVYVWGS---KRNLLLAADEKNPLEPDK-SKLLENLDPSDIACGYDSLFVVSRNGGIFAC 181

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           G G  G LG G+    +VPR++    +L  VM +    H      +A    G       K
Sbjct: 182 GKGHMGCLGLGNCDDVNVPRQIP---QLLPVMVTTVAIHPGGRHAMALTAEG-------K 231

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           +++WG G  GQLGHG+    + P  +         K+ACG   +IA+ + G++FS G   
Sbjct: 232 VYSWGCGDRGQLGHGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVLSDGKIFSWGDGS 291

Query: 548 YGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS-YHIAVVSSKSEVYTWGKGANGQLGHG 606
            G LG   +  +   +   ++  ++I  +ACG  Y IAV  +  +V++WG G NG+LG+G
Sbjct: 292 NGALGHGNNLAQLLPKKIMSLNGKHIMAVACGECYTIAV--AGDDVWSWGLGGNGELGYG 349

Query: 607 -DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            +  +   PT +EAL  K + +V CG   + A+
Sbjct: 350 VEMPSYYMPTKIEALFFKGITNVACGYATSFAV 382


>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus laevis]
 gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
          Length = 897

 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 168/346 (48%), Gaps = 20/346 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    + P+  +  +  + + + CG++H   V   G +++ G    G+LGH  +  
Sbjct: 14  LGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGH--DKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLG-QVSEISHWIPR 394
              P+ + AL+   I  V+CGE HT A+   G +++WG   H  G +G  ++E    +PR
Sbjct: 72  RKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAH--GQIGVSIAEDYIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG  H+ A++    ++++G   +G LG G ++   S PR +++L 
Sbjct: 130 NIKS-LSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLS 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +     + G  H+ A+       SG+       +F WG    GQLG  D   R  P  +
Sbjct: 189 GIPFAHIAAGGGHSFALT-----ISGA-------IFGWGRNKFGQLGLNDETDRSDPALL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNIV 296

Query: 574 EDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
             IACG  H +A V S   +Y++G G NGQLG G   NK++P++V+
Sbjct: 297 TQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVK 342



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 150/326 (46%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D     N+  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   + S   P +V G ++   I ++ CG  HT A+   G++F++G    G 
Sbjct: 60  -CNDLGQLGH--DKSRKKPEQV-GALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQ 115

Query: 435 LGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           +G         VPR +++L +++ V  +CG  H+ A+ +               +++WG 
Sbjct: 116 IGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSK------------ESNIYSWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G +      P  +K    I F  +A G   + ALT +G +F  G   +GQLG
Sbjct: 164 NQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
               T +    +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEV 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T A 
Sbjct: 284 NPRKVFELMGNIVTQIACGRQHTLAF 309



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 127/263 (48%), Gaps = 24/263 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG      +      GV I+    R   +P+ ++S   +    +ACG  H++ ++
Sbjct: 103 GQVFSWGHAAHGQI------GVSIAEDYIR---VPRNIKSLSDIQIVQVACGHHHSLALS 153

Query: 313 KQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           K+  I+SWG+   G+LG G E    S P+ I +L+G     +A G  H+ A+T+SG ++ 
Sbjct: 154 KESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   +  G LG   E     P  +   +   +I  ICCG  HTAA+T  G +FTFG G 
Sbjct: 214 WGR--NKFGQLGLNDETDRSDPALLKS-LRSQKIIYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           +G LGH   S    PR+V  L        +CG  HT A V            SS +++++
Sbjct: 271 YGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVP-----------SSGRIYSF 319

Query: 492 GDGAEGQLGHGDAEPRVVPLCVK 514
           G G  GQLG G    +  P  VK
Sbjct: 320 GLGGNGQLGIGSTSNKKSPSMVK 342



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PR+    +    +  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINK-NVRDVGCGNRHTGFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH D+S    P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH-DKSRKK-PEQVGALDAQIIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           F+WG  A GQ+G   AE  + VP  +K   DI   +VACGH  ++AL+    ++S G   
Sbjct: 106 FSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQ 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+ ++       IA G  H   ++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGSEKRKESAPRHIK-SLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGV 263


>gi|440792839|gb|ELR14047.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 390

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 161/331 (48%), Gaps = 30/331 (9%)

Query: 321 GEGSGGKLGHGVEADVSYPKLIDALNGSNIHM--VACGEFHTCAVTLSGDLYTWGDGIHN 378
           G GS G+LGHG E     P L+ +L+   I    V CG FH+  ++  G +YT G G   
Sbjct: 72  GLGSTGRLGHGDERKYRDPTLVQSLHKQGIKAKSVVCGYFHSMVISSKGQVYTCGRGYK- 130

Query: 379 LGLLGQVSE--ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
            G LG  ++  I  ++   +   +  L+++ +C    H+  +TS G++++FG    G LG
Sbjct: 131 -GFLGHKNQNNIRSFL---LVDALASLKVTQVCAARNHSLVVTSDGQVYSFGFPKHGRLG 186

Query: 437 HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
           HGD +   +P  +E L+  K V  +C   H A + +              ++F WG G +
Sbjct: 187 HGDDAYRRLPTMIEGLRGKKVVQTTCFGAHNAVLTDAG------------QVFMWGSGTD 234

Query: 497 GQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGS 556
           G+LG GD E    P+ V+  +      + CG+    A+   G +F+ G    G+LG    
Sbjct: 235 GKLGQGDNESHFAPVLVRALEGKGIKSIQCGYDFAAAINVEGHLFTWGHGLGGRLGHGDE 294

Query: 557 TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTL 616
             +    +   +    I  IACG+ H+A +S  + +YTWGK A GQLGHGD  ++  PT+
Sbjct: 295 ENRTVPSLVTALAEVPIRAIACGAGHMAAISDMNVLYTWGKNAEGQLGHGDRHDRHGPTV 354

Query: 617 VEALR---------DKQVKSVVCGSNFTAAI 638
           V  L            +V  V CG+N TA++
Sbjct: 355 VATLLLAPSEDAPPRGRVAKVSCGANHTASL 385



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/293 (34%), Positives = 137/293 (46%), Gaps = 34/293 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+  G G   G LG        +  + R  LL   L S   L    +     H+++VT
Sbjct: 120 GQVYTCGRGY-KGFLG------HKNQNNIRSFLLVDALAS---LKVTQVCAARNHSLVVT 169

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             GQ++S+G    G+LGHG +A    P +I+ L G  +    C   H   +T +G ++ W
Sbjct: 170 SDGQVYSFGFPKHGRLGHGDDAYRRLPTMIEGLRGKKVVQTTCFGAHNAVLTDAGQVFMW 229

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           G G    G LGQ    SH+ P  V   +EG  I SI CG    AAI   G LFT+G G  
Sbjct: 230 GSGTD--GKLGQGDNESHFAPVLVRA-LEGKGIKSIQCGYDFAAAINVEGHLFTWGHGLG 286

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           G LGHGD  + +VP  V  L E+     +CG  H AAI ++              L+TWG
Sbjct: 287 GRLGHGDEENRTVPSLVTALAEVPIRAIACGAGHMAAISDM------------NVLYTWG 334

Query: 493 DGAEGQLGHGDAEPR-----VVPLCVKVSDDIS----FCKVACGHSITIALTA 536
             AEGQLGHGD   R     V  L +  S+D        KV+CG + T +L +
Sbjct: 335 KNAEGQLGHGDRHDRHGPTVVATLLLAPSEDAPPRGRVAKVSCGANHTASLVS 387



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 137/288 (47%), Gaps = 17/288 (5%)

Query: 267 LGGAVNGVEISSADRRDALLPKVLESTVV--LDAQSIACGSKHAVLVTKQGQIFSWGEGS 324
           LGG  +   +   D R    P +++S     + A+S+ CG  H+++++ +GQ+++ G G 
Sbjct: 70  LGGLGSTGRLGHGDERKYRDPTLVQSLHKQGIKAKSVVCGYFHSMVISSKGQVYTCGRGY 129

Query: 325 GGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQ 384
            G LGH  + ++    L+DAL    +  V     H+  VT  G +Y++G   H  G LG 
Sbjct: 130 KGFLGHKNQNNIRSFLLVDALASLKVTQVCAARNHSLVVTSDGQVYSFGFPKH--GRLGH 187

Query: 385 VSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS 444
             +    +P  + G + G ++    C   H A +T AG++F +G GT G LG GD  S  
Sbjct: 188 GDDAYRRLPTMIEG-LRGKKVVQTTCFGAHNAVLTDAGQVFMWGSGTDGKLGQGDNESHF 246

Query: 445 VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA 504
            P  V  L+        CG +  AA + V G            LFTWG G  G+LGHGD 
Sbjct: 247 APVLVRALEGKGIKSIQCG-YDFAAAINVEG-----------HLFTWGHGLGGRLGHGDE 294

Query: 505 EPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
           E R VP  V    ++    +ACG     A++    +++ G    GQLG
Sbjct: 295 ENRTVPSLVTALAEVPIRAIACGAGHMAAISDMNVLYTWGKNAEGQLG 342



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 129/268 (48%), Gaps = 19/268 (7%)

Query: 378 NLGLLGQVSEISHWIPRKV-------SGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +LG LG    + H   RK        S   +G++  S+ CG +H+  I+S G+++T G G
Sbjct: 69  SLGGLGSTGRLGHGDERKYRDPTLVQSLHKQGIKAKSVVCGYFHSMVISSKGQVYTCGRG 128

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             G LGH ++++      V+ L  LK         H+  +             S  ++++
Sbjct: 129 YKGFLGHKNQNNIRSFLLVDALASLKVTQVCAARNHSLVVT------------SDGQVYS 176

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G    G+LGHGD   R +P  ++        +  C  +    LT  GQVF  GS   G+
Sbjct: 177 FGFPKHGRLGHGDDAYRRLPTMIEGLRGKKVVQTTCFGAHNAVLTDAGQVFMWGSGTDGK 236

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG   +   F   +   ++ + I+ I CG    A ++ +  ++TWG G  G+LGHGD EN
Sbjct: 237 LGQGDNESHFAPVLVRALEGKGIKSIQCGYDFAAAINVEGHLFTWGHGLGGRLGHGDEEN 296

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P+LV AL +  ++++ CG+   AAI
Sbjct: 297 RTVPSLVTALAEVPIRAIACGAGHMAAI 324



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 80/177 (45%), Gaps = 20/177 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF+WG G  +G LG           D      P ++ +      +SI CG   A  + 
Sbjct: 224 GQVFMWGSGT-DGKLG---------QGDNESHFAPVLVRALEGKGIKSIQCGYDFAAAIN 273

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            +G +F+WG G GG+LGHG E + + P L+ AL    I  +ACG  H  A++    LYTW
Sbjct: 274 VEGHLFTWGHGLGGRLGHGDEENRTVPSLVTALAEVPIRAIACGAGHMAAISDMNVLYTW 333

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGL--------QISSICCGPWHTAAITSA 421
           G      G LG         P  V+  +           +++ + CG  HTA++ SA
Sbjct: 334 GKNAE--GQLGHGDRHDRHGPTVVATLLLAPSEDAPPRGRVAKVSCGANHTASLVSA 388



 Score = 39.7 bits (91), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 2/44 (4%)

Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQV--KSVVCG 631
           S +   G G+ G+LGHGD    + PTLV++L  + +  KSVVCG
Sbjct: 66  STISLGGLGSTGRLGHGDERKYRDPTLVQSLHKQGIKAKSVVCG 109


>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
          Length = 677

 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 166/346 (47%), Gaps = 20/346 (5%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    + P+  +  +  + + + CG++H   V   G +++ G    G+LGH  +  
Sbjct: 14  LGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDLGQLGH--DKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLG-QVSEISHWIPR 394
              P+ + AL+   I  V+CGE HT A+   G +++WG   H  G +G  ++E    +PR
Sbjct: 72  RKKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAH--GQIGVSIAEDYIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG  H+ A++    ++++G   +G LG G ++   S PR +++L 
Sbjct: 130 NIK-SLSDIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLS 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +     + G  H+ A+              S  +F WG    GQLG  D   R  P  +
Sbjct: 189 GIPFAHIAAGGGHSFALT------------ISGAIFGWGRNKFGQLGLNDETDRSDPALL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +
Sbjct: 237 KSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNIV 296

Query: 574 EDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
             IACG  H +A V S   +Y++G G NGQLG G   NK++P++V+
Sbjct: 297 TQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVK 342



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 150/326 (46%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D     N+  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   + S   P +V G ++   I ++ CG  HT A+   G++F++G    G 
Sbjct: 60  -CNDLGQLGH--DKSRKKPEQV-GALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQ 115

Query: 435 LGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           +G         VPR +++L +++ V  +CG  H+ A+ +               +++WG 
Sbjct: 116 IGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSK------------ESNIYSWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G +      P  +K    I F  +A G   + ALT +G +F  G   +GQLG
Sbjct: 164 NQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
               T +    +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEV 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T A 
Sbjct: 284 NPRKVFELMGNIVTQIACGRQHTLAF 309



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 127/263 (48%), Gaps = 24/263 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG      +      GV I+    R   +P+ ++S   +    +ACG  H++ ++
Sbjct: 103 GQVFSWGHAAHGQI------GVSIAEDYIR---VPRNIKSLSDIQIVQVACGHHHSLALS 153

Query: 313 KQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           K+  I+SWG+   G+LG G E    S P+ I +L+G     +A G  H+ A+T+SG ++ 
Sbjct: 154 KESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   +  G LG   E     P  +   +   +I  ICCG  HTAA+T  G +FTFG G 
Sbjct: 214 WGR--NKFGQLGLNDETDRSDPALLK-SLRSQKIIYICCGEDHTAALTKEGGVFTFGAGG 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           +G LGH   S    PR+V  L        +CG  HT A V            SS +++++
Sbjct: 271 YGQLGHNSASHEVNPRKVFELMGNIVTQIACGRQHTLAFVP-----------SSGRIYSF 319

Query: 492 GDGAEGQLGHGDAEPRVVPLCVK 514
           G G  GQLG G    +  P  VK
Sbjct: 320 GLGGNGQLGIGSTSNKKSPSMVK 342



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 128/279 (45%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PR+    +    +  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVIEPRRCDFFINK-NVRDVGCGNRHTGFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH D+S    P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH-DKSRKK-PEQVGALDAQIIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           F+WG  A GQ+G   AE  + VP  +K   DI   +VACGH  ++AL+    ++S G   
Sbjct: 106 FSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQ 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+ ++       IA G  H   ++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGSEKRKESAPRHIK-SLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D  ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 225 NDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGV 263


>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
          Length = 975

 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/324 (33%), Positives = 164/324 (50%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H+V + + G++++ G  + G+LGH  E +   P+ I AL   +I  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGHVREGN--KPEQIGALADQHIIHVACGE 93

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+ S G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+     
Sbjct: 151 ALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             SG+       +F WG    GQLG  D + R  P  VK+        ++CG   T  LT
Sbjct: 206 SLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
            +G VF+ G+  YGQLG      +   R    +    +  IACG  H +A V S   +Y 
Sbjct: 259 KSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G GA GQLG G   N + P+ V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 165/336 (49%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  ++  VACG  H+  +   G++YT   
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYT--C 58

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
           G++  G LG V E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 59  GLNTKGQLGHVREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             S  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------SDGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 128/251 (50%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 SDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           W  G++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 W--GMNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           +G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 YGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA GQLG G
Sbjct: 320 GCGARGQLGTG 330



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG---LGKEFPSQAS-----PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 267 GAG--SYGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 35/165 (21%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGV 274
           G+  A   +  A SF +SLS                  G VF WG            N  
Sbjct: 189 GIPLAQVAAGGAHSFALSLS------------------GAVFGWGMN----------NAG 220

Query: 275 EISSADRRDALLP---KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG 331
           ++  +D +D   P   K+L +  V+    I+CG +H  ++TK G +F++G GS G+LGH 
Sbjct: 221 QLGLSDEKDRESPCHVKLLRTQKVV---YISCGEEHTAVLTKSGGVFTFGAGSYGQLGHD 277

Query: 332 VEADVSYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDG 375
              D   P+ +  L GS +  +ACG  HT A V  SG +Y +G G
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322


>gi|159039901|ref|YP_001539154.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918736|gb|ABW00164.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 556

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 186/389 (47%), Gaps = 32/389 (8%)

Query: 256 FIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQG 315
           F WG+   +G LG   NG    S+   D  LP     T      ++  G  H++ +T  G
Sbjct: 59  FAWGDN-SDGQLG---NGTTTGSSTPVDVYLPAGTTIT------AVTAGGLHSLALTSTG 108

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
            + +WG    G+LG+G   + S P  +D   G+ I  +A G FH+ A+T +G +  WG+ 
Sbjct: 109 AVLAWGRNFSGQLGNGDTTNRSTPVDVDLPAGTTITAIAAGAFHSLALTSAGTVLAWGEN 168

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
           +H  G LG     +   P  VS    G+ I+++  G +H+ A+TS G +  +GD + G L
Sbjct: 169 LH--GQLGNGGTTNMSTPVGVS-LPAGVTITAVAAGAFHSLAVTSTGAVLAWGDNSNGQL 225

Query: 436 GHGDRSSTSVPREVETLKELKTVMASCGVW----HTAAIVEVAGKTSGSNGLSSKKLFTW 491
           G+G  + +S P +V+ L    T+ A         H+ A+             S+     W
Sbjct: 226 GNGTTTGSSTPVDVD-LPAGTTITAVAAGVAGAAHSLALT------------STGAALAW 272

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           G+ A+GQLG+GD   R  P+ V +   ++   VA G   ++ALTA G V + G    GQL
Sbjct: 273 GNNADGQLGNGDTTNRSTPVDVDLPAGVTITAVAAGGLHSLALTAAGAVVAWGRNVSGQL 332

Query: 552 GSPGSTGKFPTRIEGNIKH-RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           G+  +TG   T ++ ++     I  IA G      +++   V  WG+  +GQLG+GD  N
Sbjct: 333 GNGTTTGSS-TPVDVDLPTGATINAIAAGFDFGLALTTAGAVVAWGRNVSGQLGNGDTIN 391

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
           + TP  V+      + +V  G   + A+ 
Sbjct: 392 RSTPVDVDLPAGVTITAVAAGGQHSMALV 420



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 165/378 (43%), Gaps = 32/378 (8%)

Query: 223 SSTADSFRISLSSAVSSSSQGSCHE-DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADR 281
           SST     +   + +++ + G  H       G V  WG    +G LG   NG   + +  
Sbjct: 77  SSTPVDVYLPAGTTITAVTAGGLHSLALTSTGAVLAWGRNF-SGQLG---NGDTTNRSTP 132

Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL 341
            D  LP     T      +IA G+ H++ +T  G + +WGE   G+LG+G   ++S P  
Sbjct: 133 VDVDLPAGTTIT------AIAAGAFHSLALTSAGTVLAWGENLHGQLGNGGTTNMSTPVG 186

Query: 342 IDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQME 401
           +    G  I  VA G FH+ AVT +G +  WGD  ++ G LG  +      P  V     
Sbjct: 187 VSLPAGVTITAVAAGAFHSLAVTSTGAVLAWGD--NSNGQLGNGTTTGSSTPVDVD-LPA 243

Query: 402 GLQIS---SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV 458
           G  I+   +   G  H+ A+TS G    +G+   G LG+GD ++ S P +V+    +   
Sbjct: 244 GTTITAVAAGVAGAAHSLALTSTGAALAWGNNADGQLGNGDTTNRSTPVDVDLPAGVTIT 303

Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
             + G  H+ A+             ++  +  WG    GQLG+G       P+ V +   
Sbjct: 304 AVAAGGLHSLALT------------AAGAVVAWGRNVSGQLGNGTTTGSSTPVDVDLPTG 351

Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIA 577
            +   +A G    +ALT  G V + G    GQLG+ G T    T ++ ++     I  +A
Sbjct: 352 ATINAIAAGFDFGLALTTAGAVVAWGRNVSGQLGN-GDTINRSTPVDVDLPAGVTITAVA 410

Query: 578 CGSYH-IAVVSSKSEVYT 594
            G  H +A+V+  +   T
Sbjct: 411 AGGQHSMALVALPTSTTT 428



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 155/359 (43%), Gaps = 38/359 (10%)

Query: 182 GKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSS 241
           G   S  L+ T A  A+ R        NF    G  D  +RS+  D   +   + +++ +
Sbjct: 97  GGLHSLALTSTGAVLAWGR--------NFSGQLGNGDTTNRSTPVD-VDLPAGTTITAIA 147

Query: 242 QGSCHE-DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQS 300
            G+ H       G V  WGE L +G LG   NG   + +      LP  +  T      +
Sbjct: 148 AGAFHSLALTSAGTVLAWGENL-HGQLG---NGGTTNMSTPVGVSLPAGVTIT------A 197

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNI---HMVACGE 357
           +A G+ H++ VT  G + +WG+ S G+LG+G     S P  +D   G+ I        G 
Sbjct: 198 VAAGAFHSLAVTSTGAVLAWGDNSNGQLGNGTTTGSSTPVDVDLPAGTTITAVAAGVAGA 257

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
            H+ A+T +G    WG+     G LG     +   P  V     G+ I+++  G  H+ A
Sbjct: 258 AHSLALTSTGAALAWGNNAD--GQLGNGDTTNRSTPVDVD-LPAGVTITAVAAGGLHSLA 314

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +T+AG +  +G    G LG+G  + +S P +V+ L    T+ A    +     +  AG  
Sbjct: 315 LTAAGAVVAWGRNVSGQLGNGTTTGSSTPVDVD-LPTGATINAIAAGFDFGLALTTAGA- 372

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
                     +  WG    GQLG+GD   R  P+ V +   ++   VA G   ++AL A
Sbjct: 373 ----------VVAWGRNVSGQLGNGDTINRSTPVDVDLPAGVTITAVAAGGQHSMALVA 421



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 16/221 (7%)

Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV 458
           Q   + +++   GP  +AAI ++   F +GD + G LG+G  + +S P +V         
Sbjct: 35  QAATMSLAAAENGP--SAAIRASDTYFAWGDNSDGQLGNGTTTGSSTPVDVYLPAGTTIT 92

Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
             + G  H+ A+             S+  +  WG    GQLG+GD   R  P+ V +   
Sbjct: 93  AVTAGGLHSLALT------------STGAVLAWGRNFSGQLGNGDTTNRSTPVDVDLPAG 140

Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIA 577
            +   +A G   ++ALT+ G V + G   +GQLG+ G+T    T +  ++     I  +A
Sbjct: 141 TTITAIAAGAFHSLALTSAGTVLAWGENLHGQLGNGGTT-NMSTPVGVSLPAGVTITAVA 199

Query: 578 CGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
            G++H   V+S   V  WG  +NGQLG+G      TP  V+
Sbjct: 200 AGAFHSLAVTSTGAVLAWGDNSNGQLGNGTTTGSSTPVDVD 240



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 2/157 (1%)

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
           +S   F WGD ++GQLG+G       P+ V +    +   V  G   ++ALT+TG V + 
Sbjct: 54  ASDTYFAWGDNSDGQLGNGTTTGSSTPVDVYLPAGTTITAVTAGGLHSLALTSTGAVLAW 113

Query: 544 GSADYGQLGSPGSTGKFPTRIEGNIKH-RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
           G    GQLG+ G T    T ++ ++     I  IA G++H   ++S   V  WG+  +GQ
Sbjct: 114 GRNFSGQLGN-GDTTNRSTPVDVDLPAGTTITAIAAGAFHSLALTSAGTVLAWGENLHGQ 172

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
           LG+G   N  TP  V       + +V  G+  + A+ 
Sbjct: 173 LGNGGTTNMSTPVGVSLPAGVTITAVAAGAFHSLAVT 209



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 2/123 (1%)

Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH 570
           L V V+   +    A  +  + A+ A+   F+ G    GQLG+ G+T    T ++  +  
Sbjct: 29  LAVMVTQAATMSLAAAENGPSAAIRASDTYFAWGDNSDGQLGN-GTTTGSSTPVDVYLPA 87

Query: 571 -RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVV 629
              I  +  G  H   ++S   V  WG+  +GQLG+GD  N+ TP  V+      + ++ 
Sbjct: 88  GTTITAVTAGGLHSLALTSTGAVLAWGRNFSGQLGNGDTTNRSTPVDVDLPAGTTITAIA 147

Query: 630 CGS 632
            G+
Sbjct: 148 AGA 150


>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
 gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 376

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/338 (32%), Positives = 163/338 (48%), Gaps = 29/338 (8%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLV-TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
           P  + +       ++ CG+++ V V + +GQI+SWG G  G+LGHG   DV  P+ I   
Sbjct: 53  PTCIAALTDAGVDAVVCGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFF 112

Query: 346 NGSNIHMVACGEFHTCAVTLS-GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           +G  +  VACG+ HT  VT   G LYT+G   +    LG  ++     P+ V+  ++G +
Sbjct: 113 SGRPVARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLS--PQLVT-ALQGER 169

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +SS+ CG  H+ A T AG +F++G G +G LG GD      P  V  L  +      CG 
Sbjct: 170 VSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGW 229

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
            H+A + +              ++FT+G    GQLGHGD      P  V          V
Sbjct: 230 RHSAVVTD------------EGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHCRVSTV 277

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEG-----------NIKHRY 572
           A G   T+A  + G +++ G   +GQLG   S  +  PT + G               R 
Sbjct: 278 AGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRR 337

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           +  +ACG  H   V+   EVY+WG+G NGQLGHG  ++
Sbjct: 338 VALLACGWRHTVAVTEAGEVYSWGRGVNGQLGHGAEQD 375



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 162/352 (46%), Gaps = 29/352 (8%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CGS H++ +   G + SWG G  G+LGHG     + P  I AL  + +  V CG  +T
Sbjct: 15  VSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCGAEYT 74

Query: 361 CAVTLS-GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
            AV  S G +Y+WG G  + G LG       ++PR ++    G  ++ + CG  HT  +T
Sbjct: 75  VAVASSRGQIYSWGWG--DFGRLGHGECGDVFVPRPIA-FFSGRPVARVACGDTHTLVVT 131

Query: 420 SA-GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
              G L+TFG    G LG G  +    P+ V  L+  +    +CG  H+ A  E      
Sbjct: 132 QGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLAATE------ 185

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
                 +  +F+WG G  G LG GD++ R  P  V   D ++   V CG   +  +T  G
Sbjct: 186 ------AGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEG 239

Query: 539 QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           +VF+ G + YGQLG           +   ++H  +  +A G  H     S+  +Y WG  
Sbjct: 240 RVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWN 299

Query: 599 ANGQLGHGDNENKQTPTLVEALRD------------KQVKSVVCGSNFTAAI 638
             GQLG GD+E++  PT V                 ++V  + CG   T A+
Sbjct: 300 KFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAV 351



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 111/241 (46%), Gaps = 12/241 (4%)

Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV 458
             E  ++  + CG  H+ A+   G + ++G G  G LGHG     + P  +  L +    
Sbjct: 6   HQEEARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVD 65

Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
              CG  +T A+             S  ++++WG G  G+LGHG+     VP  +     
Sbjct: 66  AVVCGAEYTVAVAS-----------SRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSG 114

Query: 519 ISFCKVACGHSITIALT-ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIA 577
               +VACG + T+ +T   G +++ G    GQLG   +      ++   ++   +  +A
Sbjct: 115 RPVARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGERVSSVA 174

Query: 578 CGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           CGS H    +    V++WG G  G LG GD++++ TPT V  L    V SVVCG   +A 
Sbjct: 175 CGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTSVVCGWRHSAV 234

Query: 638 I 638
           +
Sbjct: 235 V 235



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 109/232 (46%), Gaps = 27/232 (11%)

Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
           D L P+++ +       S+ACGS+H++  T+ G +FSWG G  G LG G   D   P  +
Sbjct: 155 DCLSPQLVTALQGERVSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRV 214

Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
             L+G  +  V CG  H+  VT  G ++T+  G    G LG    + H  P  V+G ++ 
Sbjct: 215 VGLDGVTVTSVVCGWRHSAVVTDEGRVFTF--GWSKYGQLGHGDHVDHTRPCLVAG-LQH 271

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL------- 455
            ++S++  G  HT A  S G L+ +G   FG LG GD    + P  V             
Sbjct: 272 CRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAG 331

Query: 456 -----KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG 502
                +  + +CG  HT A+ E            + ++++WG G  GQLGHG
Sbjct: 332 AATPRRVALLACGWRHTVAVTE------------AGEVYSWGRGVNGQLGHG 371



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 42/71 (59%)

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
           +  ++CGS H   +     V +WG+G +GQLGHG  +   +PT + AL D  V +VVCG+
Sbjct: 12  VLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVVCGA 71

Query: 633 NFTAAICLHKG 643
            +T A+   +G
Sbjct: 72  EYTVAVASSRG 82



 Score = 48.1 bits (113), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 27/36 (75%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV 336
           +ACG +H V VT+ G+++SWG G  G+LGHG E D+
Sbjct: 341 LACGWRHTVAVTEAGEVYSWGRGVNGQLGHGAEQDL 376


>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
          Length = 1983

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 115/348 (33%), Positives = 169/348 (48%), Gaps = 33/348 (9%)

Query: 306  KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL-NGSNIHMVACGEFHTCAVT 364
            ++ V +  +  I++WG G  G+LGHG     S P+ I +  + + I  VACG  H+ A +
Sbjct: 1170 RYEVDLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARS 1229

Query: 365  LSGDLYTWGDGIHNLGLLGQVS-----EISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
              G +Y WG G  + G LG +      +I++    +    ++   I SI CG WH   +T
Sbjct: 1230 FDGGVYAWGAG--DRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLT 1287

Query: 420  SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
            S  ++ ++G G FG LG     S   P+ V+ L         CG WH+AAI+E       
Sbjct: 1288 SERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCGGWHSAAILE------- 1340

Query: 480  SNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVACGHSITIALT 535
                 S K+  WG    GQLGHGD +    PRV    +++   +    +   H  T+ + 
Sbjct: 1341 -----SGKILLWGKNVYGQLGHGDTKSCSAPRVNQY-LRLEGKVRTAGLGANH--TLVVM 1392

Query: 536  ATGQVFSMGSADYGQLG--SPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
               +VF+MGS   GQLG   P  TGK  P  IE  +  + I  +A G  H   +S   EV
Sbjct: 1393 VANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIE-ELNGKNICQVAAGDQHSLALSVFGEV 1451

Query: 593  YTWGKGANGQLGHGDNENKQTPT-LVEALR-DKQVKSVVCGSNFTAAI 638
            ++WG    GQLGH    +K  PT L+E  +    VKS+ CG  F+AA+
Sbjct: 1452 WSWGGSPFGQLGHETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAM 1499



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 159/328 (48%), Gaps = 34/328 (10%)

Query: 315 GQIFSWGEGSGGKLGHGVE-----ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
           G I+++G+G  G+LGHGVE       V +PK I+ L   ++  +ACG+  T A+T +G +
Sbjct: 515 GYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKV 574

Query: 370 YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
           YTWG        LG    ++  +P+ V   +    +  I  G  H A  T   K F +G 
Sbjct: 575 YTWGKSAQGKLGLGSGKPLAIVVPQLVQ-DLSSHVVCQISLGRNHAACSTDMHKFFVWGS 633

Query: 430 GTFGALGHGDRSS-TSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
            TFG LG    SS    P E+ +L+E      +CG WHT     +    +GS       +
Sbjct: 634 NTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWHT-----LISTNTGS-------V 681

Query: 489 FTWGDGAEGQLGHGDAEP-----RVVPLCVKVSD---DISFCKVACGHSITIALTATGQV 540
            + G G  GQLGHGD E      + +P   K+ +   D    KV+ G   + A+T  G++
Sbjct: 682 MSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRL 741

Query: 541 FSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
           F+ G  D  QLG   S  + +P  +E   K R + D++ G  H+  +      Y+WG G+
Sbjct: 742 FTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVV-DVSIGDSHMLALDYSGLPYSWGNGS 800

Query: 600 NGQLGHGDNENKQT---PTLV--EALRD 622
            GQLGHG+   ++T   P ++    LRD
Sbjct: 801 AGQLGHGEMCERETLPRPIMLCRRGLRD 828



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 145/304 (47%), Gaps = 15/304 (4%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           GD +I+    G G+ G   +GVE + ++      PK +E+   +    IACG      +T
Sbjct: 513 GDGYIYT--YGKGVFGRLGHGVEYTRSEE-SVKHPKRIETLAKMSVVFIACGKDSTAALT 569

Query: 313 KQGQIFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
             G++++WG+ + GKLG   G    +  P+L+  L+   +  ++ G  H    T     +
Sbjct: 570 DTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFF 629

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVS-GQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
            WG   +  G LG +  IS ++P       +    I SI CG WHT   T+ G + + G 
Sbjct: 630 VWGS--NTFGQLG-IPHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGK 686

Query: 430 GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV-AGKTSGSNGLSSKKL 488
           G  G LGHGD  S +   +  TL   K ++   G    + IV+V AGK S +   +  +L
Sbjct: 687 GWHGQLGHGDYESLTALSK--TLPYFKKIVEGFG---DSFIVKVSAGKESSAAITNKGRL 741

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           FTWG G E QLGH  ++    P  V+    I    V+ G S  +AL  +G  +S G+   
Sbjct: 742 FTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWGNGSA 801

Query: 549 GQLG 552
           GQLG
Sbjct: 802 GQLG 805



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 147/295 (49%), Gaps = 30/295 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
            +F WG+G  GKLG+  E     P ++ A     + + A G+ HT  ++  G + + G  
Sbjct: 91  HVFMWGDGENGKLGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLSCGSN 150

Query: 376 IH-NLG----LLGQVSEISHWIPRKVSGQMEGL-----QISSICCGPWHTAAITSAGKLF 425
           ++  LG    +L + + +S    +K   +++ +      I  I  G +H+ A+   GK+F
Sbjct: 151 VYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGKIF 210

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
           ++G G++G LG G  ++   PR V +L+  K V  +CG  HTAAI  V            
Sbjct: 211 SWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVG----------- 259

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC---KVACGHSITIALTATGQVFS 542
             ++TWG G  GQLGH   +    P   +++  +  C   K+ CG   T+ +  +GQ++S
Sbjct: 260 -DVWTWGKGLRGQLGHKSVKEEFSP---RLNASLRKCGAQKIRCGDDHTLVILRSGQLYS 315

Query: 543 MGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           MG+  +GQLG   +T +  PT + G    + I+  A G   IA+ ++  +V+ +G
Sbjct: 316 MGANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNT-GKVFAFG 369



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 172/368 (46%), Gaps = 38/368 (10%)

Query: 237  VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNG--VEISSADRRDALLPKVLESTV 294
            V+   + S    FDG   V+ WG G   G LG   N   V+I+ A     +L   L+   
Sbjct: 1218 VACGCEHSLARSFDG--GVYAWGAG-DRGQLGSLENFDCVKINYAFNPQPVLN--LKRYF 1272

Query: 295  VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA 354
            +L   SIACG  H + +T + Q+ SWG G  G+LG         P+++ AL+G     + 
Sbjct: 1273 IL---SIACGRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKIL 1329

Query: 355  CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR-KVSGQMEGLQISSICCGPW 413
            CG +H+ A+  SG +  WG  ++  G LG     S   PR     ++EG ++ +   G  
Sbjct: 1330 CGGWHSAAILESGKILLWGKNVY--GQLGHGDTKSCSAPRVNQYLRLEG-KVRTAGLGAN 1386

Query: 414  HTAAITSAGKLFTFGDGTFGALGHGD--RSSTSVPREVETLKELKTVMASCGVWHTAAIV 471
            HT  +  A K+F  G    G LG  D  R+  +VP  +E L        + G  H+ A+ 
Sbjct: 1387 HTLVVMVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLAL- 1445

Query: 472  EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV----KVSDDISFCKVACG 527
             V G           ++++WG    GQLGH     ++ P  +    K+  D+    +ACG
Sbjct: 1446 SVFG-----------EVWSWGGSPFGQLGHETITDKLAPTPLLERHKIPPDVK--SIACG 1492

Query: 528  HSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
            ++ + A++A G+VF+ G+ + G+LG +P      P+ I+       +  IACG  H+A +
Sbjct: 1493 YTFSAAMSAKGEVFTWGNGESGELGHAPKVLTYAPSLIK---DFSEVVQIACGFKHMAGI 1549

Query: 587  SSKSEVYT 594
              K  + T
Sbjct: 1550 VFKPRMKT 1557



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 164/364 (45%), Gaps = 31/364 (8%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
            G VF+WGE     L      G+    A R  +L+  +L +++V     I+  S  +  VT
Sbjct: 1610 GCVFVWGEDTCGQL------GIRGLQAARSPSLMQSLLATSIV----HISANSDMSAFVT 1659

Query: 313  KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
              G ++  G    G+LG G  A    P  I +LN   I  VACG +H  A+T    +Y W
Sbjct: 1660 DSGSLYVSGGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAW 1719

Query: 373  GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            GDG      +   +++    P+++S  +    I  +  G +H+AA++  G LF +G  + 
Sbjct: 1720 GDGKWGNAGVSNTNDVLE--PQELS-SLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSN 1776

Query: 433  GALGHGDRSST-SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG G  S+    P ++  L  +  +  S G  H+A +++V          +S  LFT 
Sbjct: 1777 GQLGLGTTSAAEDSPTKISNLDGV-VMDVSLGANHSAVLMQV----------TSPNLFTC 1825

Query: 492  GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
            G  A GQLG GD   R     V   DD      +CG + T A++  G + + G+   GQL
Sbjct: 1826 GLNANGQLGLGDFVDRSTLTAVDALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQL 1885

Query: 552  GSPGSTGK---FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
            G      K    P ++   I +  +  + CG     VVS K E+Y    G    +G G N
Sbjct: 1886 GLKAGLSKDIENPVQLPA-ICNDPMVKVVCGQEVTIVVSEKGELYM--AGYESTIGLGGN 1942

Query: 609  ENKQ 612
             +++
Sbjct: 1943 SSRR 1946



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 141/307 (45%), Gaps = 30/307 (9%)

Query: 287  PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
            P  + S   +    +ACG+ H + +T++ ++++WG+G  G  G     DV  P+ + +L 
Sbjct: 1686 PVEIRSLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSNTNDVLEPQELSSLA 1745

Query: 347  GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
              +I  V  G FH+ A++  GDL+ WG   +    LG  S      P K+S  ++G+ + 
Sbjct: 1746 ACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAED-SPTKIS-NLDGV-VM 1802

Query: 407  SICCGPWHTAAI--TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
             +  G  H+A +   ++  LFT G    G LG GD    S    V+ L + + V ASCG 
Sbjct: 1803 DVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRSTLTAVDALDDRQIVSASCGA 1862

Query: 465  WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV--PLCVKVSDDISFC 522
             HTAA+ +               L TWG+G  GQLG      + +  P+ +    +    
Sbjct: 1863 AHTAAVSQYG------------DLITWGNGRNGQLGLKAGLSKDIENPVQLPAICNDPMV 1910

Query: 523  KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIE------DI 576
            KV CG  +TI ++  G+++  G      LG     G    R E ++  R +E       I
Sbjct: 1911 KVVCGQEVTIVVSEKGELYMAGYESTIGLG-----GNSSRRREFDVSFREVEGLIQPTQI 1965

Query: 577  ACGSYHI 583
            A GS H+
Sbjct: 1966 AVGSVHV 1972



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 136/290 (46%), Gaps = 33/290 (11%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           IA G  H++ +   G+IFSWG GS GKLG G +A+   P+ + +L  S +  +ACG  HT
Sbjct: 193 IAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHT 252

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T  GD++TWG G+   G LG  S    + PR ++  +       I CG  HT  I  
Sbjct: 253 AAITTVGDVWTWGKGLR--GQLGHKSVKEEFSPR-LNASLRKCGAQKIRCGDDHTLVILR 309

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           +G+L++ G  T G LG GD +   +P  V      K             ++++  K   S
Sbjct: 310 SGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANEK-------------VIDIDAKGCRS 356

Query: 481 NGLS-SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
             L+ + K+F +G+  E  L   +  PR V    K    I+  + A       A++ TGQ
Sbjct: 357 IALTNTGKVFAFGNETEPHL---NRIPRFVAGLPKSDLIIAVARTA---HFDFAISDTGQ 410

Query: 540 VFSMGSADYGQLGSPGSTGKFPTR-IEGNIKHRYIEDIACGSYHIAVVSS 588
           +F            P S+ +  +R +E     + +  + CG  H+AV+ S
Sbjct: 411 LFRW---------RPFSSEEESSRMLESFHAIKGVVRMFCGHNHMAVICS 451



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 124/266 (46%), Gaps = 14/266 (5%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           ++ WGDG  N  L  Q  EI H +P  V      + +     G  HT  +++ G + + G
Sbjct: 92  VFMWGDG-ENGKLGNQSEEIQH-VPYIVPA-FRNVLVKVCALGKQHTLFLSADGVVLSCG 148

Query: 429 DGTFGALGHGDR-----SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
              +G LG GD      +  S P + ++L +L+ ++ S        IV +A     S  L
Sbjct: 149 SNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLN-----NIVGIAAGYYHSLAL 203

Query: 484 S-SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
           + + K+F+WG G+ G+LG G       P  V    +     +ACG   T A+T  G V++
Sbjct: 204 NDTGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVGDVWT 263

Query: 543 MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
            G    GQLG      +F  R+  +++    + I CG  H  V+    ++Y+ G   +GQ
Sbjct: 264 WGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQ 323

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSV 628
           LG GD  ++  PTLV    +++V  +
Sbjct: 324 LGLGDATDRIIPTLVTGFANEKVIDI 349



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 18/228 (7%)

Query: 415  TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            +A +T +G L+  G    G LG G  +    P E+ +L  +K +  +CG +H  A+ E  
Sbjct: 1655 SAFVTDSGSLYVSGGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTE-- 1712

Query: 475  GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                       K+++ WGDG  G  G  +    + P  +      S   V  G   + AL
Sbjct: 1713 ----------EKRVYAWGDGKWGNAGVSNTNDVLEPQELSSLAACSIIGVHAGGFHSAAL 1762

Query: 535  TATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS--SKS 590
            +  G +F  G    GQLG  +  +    PT+I  N+    + D++ G+ H AV+   +  
Sbjct: 1763 SQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKIS-NLD-GVVMDVSLGANHSAVLMQVTSP 1820

Query: 591  EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             ++T G  ANGQLG GD  ++ T T V+AL D+Q+ S  CG+  TAA+
Sbjct: 1821 NLFTCGLNANGQLGLGDFVDRSTLTAVDALDDRQIVSASCGAAHTAAV 1868



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 25/228 (10%)

Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
           +F +GDG  G LG+       VP  V   + +   + + G  HT  +         ++G+
Sbjct: 92  VFMWGDGENGKLGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFL--------SADGV 143

Query: 484 SSKKLFTWGDGAEGQLGHGD-----AEPRVVPLCVKVSDDI--------SFCKVACGHSI 530
               + + G    GQLG GD     + P   P   K  D +        +   +A G+  
Sbjct: 144 ----VLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYH 199

Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           ++AL  TG++FS GS  +G+LG          R   ++++  +  IACG++H A +++  
Sbjct: 200 SLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVG 259

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +V+TWGKG  GQLGH   + + +P L  +LR    + + CG + T  I
Sbjct: 260 DVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVI 307



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 13/169 (7%)

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
           L    +F WGDG  G+LG+   E + VP  V    ++     A G   T+ L+A G V S
Sbjct: 87  LQGSHVFMWGDGENGKLGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVVLS 146

Query: 543 MGSADYGQLG------------SPGSTGKFPTRIEGNIKH-RYIEDIACGSYHIAVVSSK 589
            GS  YGQLG            S  S  K   +++  I+    I  IA G YH   ++  
Sbjct: 147 CGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDT 206

Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            ++++WG G+ G+LG G + N ++P  V +L++ +V  + CG++ TAAI
Sbjct: 207 GKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAI 255



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 137/323 (42%), Gaps = 44/323 (13%)

Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLS------GDLYTWGDGIHNLGLLGQVSE------ 387
           K++ AL G+N   +   EF T  V  S      G +YT+G G+   G LG   E      
Sbjct: 485 KILPAL-GTNTEYLD--EFATVQVRDSPSREGDGYIYTYGKGV--FGRLGHGVEYTRSEE 539

Query: 388 -ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG--ALGHGDRSSTS 444
            + H  P+++   +  + +  I CG   TAA+T  GK++T+G    G   LG G   +  
Sbjct: 540 SVKH--PKRIE-TLAKMSVVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPLAIV 596

Query: 445 VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA 504
           VP+ V+ L        S G  H A   ++             K F WG    GQLG    
Sbjct: 597 VPQLVQDLSSHVVCQISLGRNHAACSTDM------------HKFFVWGSNTFGQLGIPHI 644

Query: 505 EPRVV-PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG--------SPG 555
              +  P  +    + +   +ACG   T+  T TG V S G   +GQLG        +  
Sbjct: 645 SSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALS 704

Query: 556 STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPT 615
            T  +  +I       +I  ++ G    A +++K  ++TWGKG   QLGH  ++N+  P 
Sbjct: 705 KTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGDEYQLGHESSKNEAYPR 764

Query: 616 LVEALRDKQVKSVVCGSNFTAAI 638
            VE     +V  V  G +   A+
Sbjct: 765 EVEFFAKIRVVDVSIGDSHMLAL 787



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 103/442 (23%), Positives = 175/442 (39%), Gaps = 93/442 (21%)

Query: 252 LGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           +GDV+ WG+GL  G LG             ++   P++  S     AQ I CG  H +++
Sbjct: 258 VGDVWTWGKGL-RGQLG---------HKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVI 307

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            + GQ++S G  + G+LG G   D   P L+       +  +      + A+T +G ++ 
Sbjct: 308 LRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKVIDIDAKGCRSIALTNTGKVFA 367

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           +G+         +     + IPR V+G  +   I ++        AI+  G+LF +   +
Sbjct: 368 FGN---------ETEPHLNRIPRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRWRPFS 418

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTA-----------AIVEVAGKTSG 479
                    S     R +E+   +K V+   CG  H A           A++     TS 
Sbjct: 419 ---------SEEESSRMLESFHAIKGVVRMFCGHNHMAVICSPEMGCTQAMISRNKSTSF 469

Query: 480 SNGLSSKKL---------------------------------------FTWGDGAEGQLG 500
           S+ +S   L                                       +T+G G  G+LG
Sbjct: 470 SSDISRASLEKFPSEKILPALGTNTEYLDEFATVQVRDSPSREGDGYIYTYGKGVFGRLG 529

Query: 501 HGDAEPRVV-----PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG 555
           HG    R       P  ++    +S   +ACG   T ALT TG+V++ G +  G+LG   
Sbjct: 530 HGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKVYTWGKSAQGKLGL-- 587

Query: 556 STGK-----FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD-NE 609
            +GK      P  ++ ++    +  I+ G  H A  +   + + WG    GQLG    + 
Sbjct: 588 GSGKPLAIVVPQLVQ-DLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQLGIPHISS 646

Query: 610 NKQTPTLVEALRDKQVKSVVCG 631
               P  + +LR+  ++S+ CG
Sbjct: 647 YMPDPYEITSLREANIRSIACG 668



 Score = 41.2 bits (95), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 16/106 (15%)

Query: 226 ADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDAL 285
            DSF + +S+   SS+           G +F WG+G          +  ++     ++  
Sbjct: 718 GDSFIVKVSAGKESSAA------ITNKGRLFTWGKG----------DEYQLGHESSKNEA 761

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG 331
            P+ +E    +    ++ G  H + +   G  +SWG GS G+LGHG
Sbjct: 762 YPREVEFFAKIRVVDVSIGDSHMLALDYSGLPYSWGNGSAGQLGHG 807


>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
           CCMP2712]
          Length = 355

 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 164/333 (49%), Gaps = 25/333 (7%)

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDALNGSNIHMVAC 355
           + +SI  G  H+ ++ + G +++WG G  G+LGH V  ++   P ++  +       VAC
Sbjct: 37  NVRSIGAGKSHSAVIAEDGDVYTWGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVAC 96

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
           G  HT  VT +G +YTWG+  +  G LG     S   P  +   +    + SI CG +HT
Sbjct: 97  GRNHTVVVTDNGLIYTWGE--NKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHT 154

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            AI   G ++++G    G LGHG+  +   P +V  + +   + A+CG  HT  + +   
Sbjct: 155 VAICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTD--- 211

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV-PLCVKVSDDISFCKVACGHSITIAL 534
                    + K++ WG  A GQLG   ++  V+ P  V        C V CG+S ++AL
Sbjct: 212 ---------ANKIYAWGSNAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMAL 262

Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSE-- 591
               Q+++ G  D GQLG    T      +   ++   ++ IACG  H +A V+ + E  
Sbjct: 263 MKNEQIYTWGRNDCGQLGLGHYTHSPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPG 322

Query: 592 ------VYTWGKGANGQLGHGDNENKQTPTLVE 618
                 VY+WG+G  GQLGH +  ++ TP +VE
Sbjct: 323 MPPLEHVYSWGRGEEGQLGHNELLSRCTPRIVE 355



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 162/334 (48%), Gaps = 32/334 (9%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYP----KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           ++SWG+   G+LG G   +V  P     L D LN  N+  +  G+ H+  +   GD+YTW
Sbjct: 1   VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTW 60

Query: 373 GDGIHNLGLLGQ--VSEIS---HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           G G    G LG   V+EI    H +P+     ME    S++ CG  HT  +T  G ++T+
Sbjct: 61  GRGWE--GQLGHDVVTEIELEPHIVPK-----MENRGSSAVACGRNHTVVVTDNGLIYTW 113

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVWHTAAIVEVAGKTSGSNGLSSK 486
           G+   G LG GD  S++ P  +++   L +V++ +CG +HT AI                
Sbjct: 114 GENKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAIC------------IEG 161

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPL-CVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
            +++WG    GQLGHG+ +    P   V ++  I   + ACG   T+ LT   ++++ GS
Sbjct: 162 TIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICI-RAACGGQHTLVLTDANKIYAWGS 220

Query: 546 ADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
             YGQLG +          I  +++      + CG  H   +    ++YTWG+   GQLG
Sbjct: 221 NAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWGRNDCGQLG 280

Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G   +   P LV ALR  +V+ + CG +   A 
Sbjct: 281 LGHYTHSPVPELVTALRSVRVQQIACGYDHCVAF 314



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 116/268 (43%), Gaps = 26/268 (9%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           G ++ WGE     LG G L  + + V I SA      LP VL         SIACG  H 
Sbjct: 108 GLIYTWGENKAGQLGTGDLKSSNSPVLIDSALN----LPSVL---------SIACGEFHT 154

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           V +  +G I+SWG    G+LGHG      +P  +  +        ACG  HT  +T +  
Sbjct: 155 VAICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANK 214

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +Y WG   +  G LG        +   +   +       + CG  H+ A+    +++T+G
Sbjct: 215 IYAWGSNAY--GQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQIYTWG 272

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIV--EVAGKTSGSNGLSSK 486
               G LG G  + + VP  V  L+ ++    +CG  H  A V  EV            +
Sbjct: 273 RNDCGQLGLGHYTHSPVPELVTALRSVRVQQIACGYDHCVAFVADEVEPGMP-----PLE 327

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
            +++WG G EGQLGH +   R  P  V+
Sbjct: 328 HVYSWGRGEEGQLGHNELLSRCTPRIVE 355



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 6/159 (3%)

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCV-KVSDDIS---FCKVACGHSITIALTATGQVFSM 543
           +++WG    GQLG G      +P  +  +SD ++      +  G S +  +   G V++ 
Sbjct: 1   VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTW 60

Query: 544 GSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
           G    GQLG    T  +    I   +++R    +ACG  H  VV+    +YTWG+   GQ
Sbjct: 61  GRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGENKAGQ 120

Query: 603 LGHGDNENKQTPTLVE-ALRDKQVKSVVCGSNFTAAICL 640
           LG GD ++  +P L++ AL    V S+ CG   T AIC+
Sbjct: 121 LGTGDLKSSNSPVLIDSALNLPSVLSIACGEFHTVAICI 159


>gi|297850954|ref|XP_002893358.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297339200|gb|EFH69617.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 388

 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 130/403 (32%), Positives = 196/403 (48%), Gaps = 49/403 (12%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           V+ WG G  +G LG         +A  +D LLP++L  T +     +ACG  H + +T  
Sbjct: 17  VWSWGAGT-DGQLG---------TAKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSD 66

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           G++F+WG GS G+LGHG   +++ PKL+   +G  I   A G  H+  V+ SG L+T G+
Sbjct: 67  GKVFTWGRGSSGQLGHGDILNITLPKLVSFFDGYVITQAAAGWSHSGFVSDSGCLFTCGN 126

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
           G  + G LG    +S   P KVS       +  + CG  H+  + +  ++  FG G  G 
Sbjct: 127 G--SFGQLGHGDNMSLRTPAKVS-YFSNESVKMVACGMRHSLVLLAGNQVCGFGSGKRGQ 183

Query: 435 LGHGDRSSTSV--PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           LG     + SV  P  V  LK+++    S    H+AAI             +  + F+WG
Sbjct: 184 LGFTSDGTKSVNLPCVVSGLKDVEVTRISANGDHSAAIS------------ADGQFFSWG 231

Query: 493 DGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA----- 546
            G         A P V  P C+  S  +SF KVA G +  + LT  G+VF +G+      
Sbjct: 232 RGF-------CAGPDVQTPQCLPSS--LSFRKVAVGWNHALLLTVDGEVFKLGNTLNKQP 282

Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
           +  QL    S+     ++  +     +  IA G+ H A V+   +V TWG G +GQLG G
Sbjct: 283 EKQQL-QIDSSEALLAKVS-DFDGVKVLQIAAGAEHSAAVTENGKVKTWGWGEHGQLGLG 340

Query: 607 DNENKQTPTLVEA----LRDKQVKSVVCGSNFTAAICLHKGVS 645
           +  ++ +P LV      LR K++K V CGS FT A+   +G+S
Sbjct: 341 NTNDQTSPQLVSVGSIDLRTKEIK-VYCGSGFTYAVRRKQGLS 382


>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
          Length = 1874

 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 211/480 (43%), Gaps = 49/480 (10%)

Query: 170  LVAYENSPQNRLGKAFSEVLS-------FTAAAKAYTRAESVSKSLNFVASGGLDDANSR 222
            ++ +  SP      A S VLS       FT A K+  +A S  + L F +S   D     
Sbjct: 910  VLCHSPSPPLHHTAAESSVLSEWHWLHNFTMALKS-CKALSTGRPLPFASSYKDDLKWDV 968

Query: 223  SSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRR 282
               A     S+         GSC        D ++WG G    L               R
Sbjct: 969  QKDAAIIAWSVQHPDDWQMGGSC--------DAYLWGGGRHGQLCEAG-----------R 1009

Query: 283  DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
              L P  L ++    AQ I CG     ++   G + + GEGS G+LG G   D+    ++
Sbjct: 1010 SVLTP--LHTSSFSSAQQIICGQNCTFVIQANGTVLACGEGSYGRLGQGNSDDLHSLTIV 1067

Query: 343  DALNGSNIHMVACG---EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ 399
             AL G  +  +      + H+ A+T SG++++WGDG  + G LG  +      PR++   
Sbjct: 1068 SALQGFVVTQLVTSVGSDGHSLALTESGEVFSWGDG--DYGKLGHGNSDRQRRPRQIEA- 1124

Query: 400  MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
            ++G ++  I CG  H+A +T  GKL TFG+G +G LG G   +   P  V+ L+      
Sbjct: 1125 LQGEEVIQIACGFKHSAVVTVDGKLLTFGNGDYGRLGLGTVCNRKTPERVKALENYHIGH 1184

Query: 460  ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
             +CG+ HT   V   G T+          + +GDG  G+LG G+   +  P+ ++    +
Sbjct: 1185 VACGLNHTVC-VSADGSTT----------WAFGDGDYGKLGLGNTSAKSTPVKIEALSGL 1233

Query: 520  SFCKVACGHSITIALTATGQVFSMGSADY-GQLGSPGSTGKFPTRIEGNIKHRYIEDIAC 578
               KVACG   ++ALT  G V + G     GQ  +       P ++     H +IE++  
Sbjct: 1234 KVKKVACGTQFSVALTRDGFVLTWGQDRLIGQTEAQMRGHCTPQKVTTLAGH-FIEEVVV 1292

Query: 579  GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ-VKSVVCGSNFTAA 637
            GS H   ++S   V+ WG  A+GQLG G     + P L+  L   + +K +  G   +AA
Sbjct: 1293 GSEHTLALTSDGNVWGWGLNADGQLGLGHTGTVREPQLLGGLGSSEPIKQISAGRTHSAA 1352



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 167/363 (46%), Gaps = 34/363 (9%)

Query: 234  SSAVSSSSQGSCHED----FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKV 289
            +S+ SS+ Q  C ++        G V   GEG   G LG      + +S D     +   
Sbjct: 1017 TSSFSSAQQIICGQNCTFVIQANGTVLACGEG-SYGRLG------QGNSDDLHSLTIVSA 1069

Query: 290  LESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN 349
            L+  VV    +      H++ +T+ G++FSWG+G  GKLGHG       P+ I+AL G  
Sbjct: 1070 LQGFVVTQLVTSVGSDGHSLALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEE 1129

Query: 350  IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
            +  +ACG  H+  VT+ G L T+G+G  + G LG  +  +   P +V   +E   I  + 
Sbjct: 1130 VIQIACGFKHSAVVTVDGKLLTFGNG--DYGRLGLGTVCNRKTPERVKA-LENYHIGHVA 1186

Query: 410  CGPWHTAAITSAGK-LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTA 468
            CG  HT  +++ G   + FGDG +G LG G+ S+ S P ++E L  LK    +CG   + 
Sbjct: 1187 CGLNHTVCVSADGSTTWAFGDGDYGKLGLGNTSAKSTPVKIEALSGLKVKKVACGTQFSV 1246

Query: 469  AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR--VVPLCVKVSDDISFCKVAC 526
            A+          +G     + TWG   +  +G  +A+ R    P  V         +V  
Sbjct: 1247 ALTR--------DGF----VLTWGQ--DRLIGQTEAQMRGHCTPQKVTTLAGHFIEEVVV 1292

Query: 527  GHSITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIA 584
            G   T+ALT+ G V+  G    GQLG  G TG    P  + G      I+ I+ G  H A
Sbjct: 1293 GSEHTLALTSDGNVWGWGLNADGQLGL-GHTGTVREPQLLGGLGSSEPIKQISAGRTHSA 1351

Query: 585  VVS 587
              S
Sbjct: 1352 AWS 1354



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 132/278 (47%), Gaps = 24/278 (8%)

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISS---ICCGPWHTAAITSAG 422
            S D Y WG G H     GQ+ E      R V   +     SS   I CG   T  I + G
Sbjct: 990  SCDAYLWGGGRH-----GQLCEAG----RSVLTPLHTSSFSSAQQIICGQNCTFVIQANG 1040

Query: 423  KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
             +   G+G++G LG G+          + L  L  V A  G   T  +  V         
Sbjct: 1041 TVLACGEGSYGRLGQGNS---------DDLHSLTIVSALQGFVVTQLVTSVGSDGHSLAL 1091

Query: 483  LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              S ++F+WGDG  G+LGHG+++ +  P  ++        ++ACG   +  +T  G++ +
Sbjct: 1092 TESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQIACGFKHSAVVTVDGKLLT 1151

Query: 543  MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSK-SEVYTWGKGAN 600
             G+ DYG+LG       K P R++  +++ +I  +ACG  H   VS+  S  + +G G  
Sbjct: 1152 FGNGDYGRLGLGTVCNRKTPERVKA-LENYHIGHVACGLNHTVCVSADGSTTWAFGDGDY 1210

Query: 601  GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+LG G+   K TP  +EAL   +VK V CG+ F+ A+
Sbjct: 1211 GKLGLGNTSAKSTPVKIEALSGLKVKKVACGTQFSVAL 1248


>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
          Length = 1203

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L+ G           +   L PK+  S    DAQ+I  G     +++ 
Sbjct: 373 EVYVWGSNSSHQLVEGT----------QEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + S  K +      +I  V+     + HT A T  G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +   P+ + G ++G  +  +  G  H+AA+T  G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LGHGD +S ++P  V+ +  +  V  SCG  HT A+ +             + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++    +   KV  G   ++ALT+TGQV++ G      
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  IE  +    I DI+ G  H   +S  +EVY WG  + GQ G G++  
Sbjct: 646 CGSSEATALRPKLIE-ELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    ++ +  G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)

Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
           GL D+N++S+    +F    S    SSS+GS      F   G+VF WG+G    LG+G  
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    SS  +   L+   L+  VV+    ++ G +H+  VT+ G++++WGEG  G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           LGHG     + P L+  +  SN+  V+CG  HT A++  G    W  G  + G LG    
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
              + P KV   ++G+ I  +C G   + A+TS G+++ +G G    LG G   +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
           + +E L   + V  S G  H  ++                +++ WG+ + GQ G G++  
Sbjct: 657 KLIEELAATRIVDISIGDSHCLSLSH------------DNEVYAWGNNSMGQCGQGNSTG 704

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           P   P  V   D I+  +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 133/256 (51%), Gaps = 23/256 (8%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
           +I  G + T  I++ G +   G G++G LG GD ++ S  +++  E  + +K V +S G 
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466

Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
             HT A              +  ++F+WGDG  G+LGHG++  +  P  ++  +   +  
Sbjct: 467 DGHTLAFT------------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
           C V+ G+  + A+T  G++++ G  D+G+LG   S  +  PT ++ +I +  + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570

Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            H IA+      V+++G G NG+LGHGD      P ++EAL+   ++ V  GS  + A+ 
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630

Query: 640 LHKGVSIADHSICSGC 655
               V       C GC
Sbjct: 631 STGQVYAWGCGACLGC 646


>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
          Length = 1504

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 186/393 (47%), Gaps = 30/393 (7%)

Query: 230 RISLSSAVSSSSQGSCHEDFDGLGDVFIWGE-GLGNGLLGGAVNGVEISSADRRDALLPK 288
           R  +S  V+++   +   D   +  +  WG   LG   +   + G+            P+
Sbjct: 430 RAPVSHIVTAAYYLAVFVDVSWIRTMLCWGYWSLGQPGISSNLQGIVAE---------PQ 480

Query: 289 VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
           V         + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   
Sbjct: 481 VCGFIADRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQ 538

Query: 349 NIHMVACGEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISS 407
           +I  VACGE H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  
Sbjct: 539 HIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQ 595

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWH 466
           + CG WH  A+ + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H
Sbjct: 596 VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAH 655

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           + A+       SG+       +F WG    GQLG  D + R  P  VK+        ++C
Sbjct: 656 SFAL-----SLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISC 703

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAV 585
           G   T  LT +G VF+ G+   GQLG      +   R    +    +  IACG  H +A 
Sbjct: 704 GEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAF 763

Query: 586 VSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
           V S   +Y +G GA GQLG G   N + P+ V+
Sbjct: 764 VPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 796



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 163/336 (48%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   +   ++  VACG  H+  +   G++YT G 
Sbjct: 455 MLCWGYWSLGQPGISSNLQGIVAEPQVCGFIADRSVKEVACGGNHSVFLLEDGEVYTCG- 513

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 514 -LNTKGQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 569

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 570 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 617

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 618 NSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 677

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 678 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 736

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 737 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 772


>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 883

 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 182/377 (48%), Gaps = 39/377 (10%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
           L    IAC  K  +++++ G++++              +D   P+L+  L   NI  +A 
Sbjct: 452 LGVSQIACAEKRFLILSRSGRVYT----------QAYSSDALAPQLVQGLVSRNIVKIAA 501

Query: 356 GE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQMEGLQISSICC 410
                H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  G ++  I C
Sbjct: 502 HSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKLISAFCGKQAGQRVVHIAC 559

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV--WHTA 468
           G  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +CG     T 
Sbjct: 560 GSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTL 619

Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH 528
           A+ E        NG    ++++WGDG  G+LG G ++    P  V+   D+   KV CG 
Sbjct: 620 AVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDVVKVRCGS 667

Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
             ++ALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A GS H   ++
Sbjct: 668 QFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAAGSTHCLALT 726

Query: 588 SKSEVYTWGKGANGQLGHGD--NENKQTPTLVEALRDKQVKSVVCG--SNFTAAICLHKG 643
             SEV++W  G+N Q  H D  +  K  P  +  L  K +  + CG   +F  + C    
Sbjct: 727 EDSEVHSW--GSNDQCQHFDTLHATKPEPAALPGLDTKHIVGIACGPAQSFAWSSCSEWS 784

Query: 644 VSIADHSICSGCRNQFN 660
           + +    +   C   F 
Sbjct: 785 IGLRVPFVVDVCSMTFE 801



 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/318 (32%), Positives = 157/318 (49%), Gaps = 25/318 (7%)

Query: 283 DALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPK 340
           DAL P++++  V  +   IA  S   H + +   G+++SWG G GG+LGHG    +  PK
Sbjct: 481 DALAPQLVQGLVSRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPK 540

Query: 341 LIDAL----NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV 396
           LI A      G  +  +ACG  ++ A+T  G+LYTWG G  N G LG  S     IP  V
Sbjct: 541 LISAFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHGSSEDEAIPMLV 598

Query: 397 SGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           +G ++GL++  + CG     T A+T  G+++++GDG +G LG G       P+ VE L++
Sbjct: 599 AG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQD 657

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
           L  V   CG   + A+ +              ++++WG G   +LGHG  E    P  ++
Sbjct: 658 LDVVKVRCGSQFSVALTK------------DGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705

Query: 515 VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPTRIEGNIKHRYI 573
                    VA G +  +ALT   +V S GS D  Q   +  +T   P  + G +  ++I
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLHATKPEPAALPG-LDTKHI 764

Query: 574 EDIACGSYHIAVVSSKSE 591
             IACG       SS SE
Sbjct: 765 VGIACGPAQSFAWSSCSE 782



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 161/319 (50%), Gaps = 29/319 (9%)

Query: 326 GKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           G +G    A+V  P     L    +  +AC E     ++ SG +YT            Q 
Sbjct: 430 GLIGWKYYANVIGPIQCAGLASLGVSQIACAEKRFLILSRSGRVYT------------QA 477

Query: 386 SEISHWIPRKVSGQMEG--LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
                  P+ V G +    ++I++   G  H  A+ + G+++++G G  G LGHGD    
Sbjct: 478 YSSDALAPQLVQGLVSRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGGRLGHGD---- 532

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHG 502
           +VP     L+E K + A CG      +V +A  ++ S  ++++ +L+TWG G  G+LGHG
Sbjct: 533 TVP-----LEEPKLISAFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHG 587

Query: 503 DAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQLGSPGSTG-K 559
            +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+LG  GS G K
Sbjct: 588 SSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCK 647

Query: 560 FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
            P  +E  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E+ + P L+E 
Sbjct: 648 TPKLVE-KLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG 706

Query: 620 LRDKQVKSVVCGSNFTAAI 638
           L+ K+V  V  GS    A+
Sbjct: 707 LQGKKVIDVAAGSTHCLAL 725



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKLISAFCGKQAGQRVV- 555

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 556 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 612

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ V  +++ L +  + CG   
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLVE-KLQDLDVVKVRCGSQF 669

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 670 SVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ +V +T
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLVEKLQDLDVVKVRCGSQFSVALT 674

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L         +P      ++   I  I CGP  + A +S
Sbjct: 735 GSNDQCQHFDTLHATKPEPAALP-----GLDTKHIVGIACGPAQSFAWSS 779


>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus (Silurana) tropicalis]
 gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 1049

 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 192/434 (44%), Gaps = 29/434 (6%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +  + + + CGS+H V V   G +++ G    G+LGH  +  
Sbjct: 14  LGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGH--DKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPR 394
              P+ + AL+   I  V+CGE HT A+   G +++WG  ++  +GL    +E    +PR
Sbjct: 72  RRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGL--STAEEYIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG  H+ A++    +F++G   +G LG G +      PR +++L 
Sbjct: 130 NIKS-LSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLS 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +     + G  H+ A+       SG+       +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFAHIAAGGGHSFALT-----ISGA-------IFGWGRNKFGQLGLTDETDRNVPALL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   +  +   R    +    +
Sbjct: 237 KSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIV 296

Query: 574 EDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
             IACG  H +A V S   +Y++G G NGQLG G   N+++P  V+         V    
Sbjct: 297 TQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSPFTVKGNWLTYEDYVRHLP 356

Query: 633 NFTAAICLHKGVSIADHSI-----CSGCRNQFNFRR----RRHNCYNCGLVYCKLCSSKK 683
                 CL +  S  D S         C    +FRR    R+    + G++   L  S  
Sbjct: 357 EANGCYCLKRIYSGGDQSFAHYITIQNCHPPDDFRRCNCSRKIRTLDEGVIQRWLNYSLG 416

Query: 684 SMKTALAPEINKPY 697
            +   +  EI+K +
Sbjct: 417 RLPLEIVNEIDKVF 430



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 152/326 (46%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D     N+  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   + S   P +V G ++   I ++ CG  HT A+   G++F++G   +G 
Sbjct: 60  -CNDLGQLGH--DKSRRKPEQV-GALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQ 115

Query: 435 LGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           +G         VPR +++L +++ V  +CG  H+ A+ +               +F+WG 
Sbjct: 116 IGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSK------------DSDIFSWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G + +    P  +K    I F  +A G   + ALT +G +F  G   +GQLG
Sbjct: 164 NQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
               T +    +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEV 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T A 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTLAF 309



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/264 (33%), Positives = 130/264 (49%), Gaps = 26/264 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNG-VEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           G VF WG          AV G + +S+A+     +P+ ++S   +    +ACG  H++ +
Sbjct: 103 GQVFSWGH---------AVYGQIGLSTAEEY-IRVPRNIKSLSDVQIVQVACGHHHSLAL 152

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVS-YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           +K   IFSWG+   G+LG G+E      P+ I +L+G     +A G  H+ A+T+SG ++
Sbjct: 153 SKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIF 212

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            WG   +  G LG   E    +P  +   +   +I  ICCG  HTAA+T  G +FTFG G
Sbjct: 213 GWGR--NKFGQLGLTDETDRNVPALLKS-LRSQKIIHICCGEDHTAALTKEGGVFTFGAG 269

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            +G LGH   +    PR+V  L        +CG  HT A V            SS ++++
Sbjct: 270 GYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVP-----------SSGRIYS 318

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVK 514
           +G G  GQLG G    R  P  VK
Sbjct: 319 FGLGGNGQLGTGSTINRKSPFTVK 342



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 12/175 (6%)

Query: 488 LFTWGDGAEGQLGHGDAEPRVV--PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
           +  WG+ + GQLG G  +  VV  P       + +   V CG   T+ +   G V++ G 
Sbjct: 1   MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGC 60

Query: 546 ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
            D GQLG   S  K P ++ G +  + I  ++CG  H   ++ K +V++WG    GQ+G 
Sbjct: 61  NDLGQLGHDKSRRK-PEQV-GALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGL 118

Query: 606 GDNENK-QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQF 659
              E   + P  +++L D Q+  V CG + + A+         D  I S  +NQ+
Sbjct: 119 STAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALS-------KDSDIFSWGQNQY 166


>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
          Length = 328

 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 175/324 (54%), Gaps = 20/324 (6%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDA 344
           +P   E+   L+   +A GSK    VT +G++++ GE + G+LG G+ +  V  P+ I A
Sbjct: 20  VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITA 79

Query: 345 LNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
           L+   +  VA   G  H  A+T+ G ++ WG+G  + G LG  S ++   PR +   ++ 
Sbjct: 80  LSSYVVKKVAVHSGGRHATALTVDGKVFWWGEG--DDGKLGHFSRMNCDKPRLIE-ALKT 136

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
            +I  I CG  H+AA+TS+G+L+T+G G +G LGHGD ++   P+ V+ L   + +  +C
Sbjct: 137 KRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVAC 196

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKL-FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
           G            + + +  L+ + L F+WGDG  G+LG G +E   +P  ++  +    
Sbjct: 197 G-----------SRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGV 245

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGS 580
           C++ CG   ++ALT +G V++ G  DY +LG       + P  +EG ++ + I  +A G+
Sbjct: 246 CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEG-LRGKKIVHVAVGA 304

Query: 581 YHIAVVSSKSEVYTWGKGANGQLG 604
            H   V+   +VY WG   +GQ G
Sbjct: 305 LHCLAVTDSGQVYAWGDNDHGQQG 328



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/332 (32%), Positives = 162/332 (48%), Gaps = 36/332 (10%)

Query: 320 WGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNL 379
           WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y  G+  +  
Sbjct: 2   WGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGR 61

Query: 380 GLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
             LG          Q++ +S ++ +KV+          +  G  H  A+T  GK+F +G+
Sbjct: 62  LGLGISSGTVPIPRQITALSSYVVKKVA----------VHSGGRHATALTVDGKVFWWGE 111

Query: 430 GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
           G  G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+
Sbjct: 112 GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELY 159

Query: 490 TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSAD 547
           TWG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D
Sbjct: 160 TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGD 219

Query: 548 YGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
           +G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG   +LGHG
Sbjct: 220 FGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHG 278

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + + + P +VE LR K++  V  G+    A+
Sbjct: 279 SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 310



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 95/204 (46%), Gaps = 17/204 (8%)

Query: 441 SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQL 499
           S   VP   ETL  L              +V+VAG +     ++ + K++  G+   G+L
Sbjct: 16  SKIKVPSFSETLSALN-------------VVQVAGGSKSLFAVTVEGKVYACGEATNGRL 62

Query: 500 GHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSITIALTATGQVFSMGSADYGQLGSPGS 556
           G G +   V +P  +         KVA   G     ALT  G+VF  G  D G+LG    
Sbjct: 63  GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHFSR 122

Query: 557 TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTL 616
                 R+   +K + I DIACGS H A ++S  E+YTWG G  G+LGHGDN  +  P +
Sbjct: 123 MNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKM 182

Query: 617 VEALRDKQVKSVVCGSNFTAAICL 640
           V+ L   +V  V CGS     + L
Sbjct: 183 VKVLLGHRVIQVACGSRDAQTLAL 206


>gi|145547042|ref|XP_001459203.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427027|emb|CAK91806.1| unnamed protein product [Paramecium tetraurelia]
          Length = 560

 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 193/400 (48%), Gaps = 50/400 (12%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           E+S  +++    PK ++       Q I+ GS H+ +VT+ GQ+F  G    GKLG     
Sbjct: 27  ELSIGNQKKCNAPKAVQGLKNQTVQLISSGSNHSGIVTQDGQLFICGSALHGKLGFEDAN 86

Query: 335 DVSYPK--LIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI 392
             SYPK  L+ A+ G  +  VA G++HT  +  +G +Y WG  +H    LG  +      
Sbjct: 87  QPSYPKFLLVQAMKGLFVTQVATGDYHTLCLLDNGQVYAWGGTLHKK--LGSKA------ 138

Query: 393 PRKVSGQMEGLQ--ISSICCGPWHTAAITSAGKLFTFGDG----TFGALGHGDRSSTSVP 446
                 ++E L+  I  I CG +H+AA+++ G L+T+G G      G LGHG  +    P
Sbjct: 139 --GKPARIETLKQTIVQIGCGDFHSAALSANGDLYTWGGGGRDYNRGQLGHGHLNDVETP 196

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP 506
           + V+       V  SCG +H  A+ +              +L++WG G  G+ G G+ + 
Sbjct: 197 QIVKD----NIVKFSCGGYHMMALDK------------DGELWSWGSGMYGETGQGEFQD 240

Query: 507 RVVPLCVKVS--------DDI--------SFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            ++P  VK++        DDI        +  +++ G   ++ L+  G V++ G A +GQ
Sbjct: 241 SLLPKKVKINFNQKHIIIDDIFVQNKQESTIKEISLGGHHSLLLSNKGIVYACGYAQHGQ 300

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           LG   +  +   ++   I  + I  IA G  H  V++S S+VYT G    GQLG GD E+
Sbjct: 301 LGIKATENQNKFQLVIGISGKTIVQIAAGWNHSIVLTSHSDVYTCGHNQAGQLGVGDYES 360

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHS 650
           +   T +  L  +++K +  G N + A+  +    I D+S
Sbjct: 361 RTQYTRINFLEQRRIKQLFAGGNHSWALIDYNQPRIDDYS 400



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 159/359 (44%), Gaps = 52/359 (14%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           +F+WG    G+L  G +   + PK +  L    + +++ G  H+  VT  G L+  G  +
Sbjct: 17  LFAWGRNKDGELSIGNQKKCNAPKAVQGLKNQTVQLISSGSNHSGIVTQDGQLFICGSAL 76

Query: 377 HNLGLLGQVSEISHWIPRKVSGQ-MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
           H  G LG         P+ +  Q M+GL ++ +  G +HT  +   G+++ +G      L
Sbjct: 77  H--GKLGFEDANQPSYPKFLLVQAMKGLFVTQVATGDYHTLCLLDNGQVYAWGGTLHKKL 134

Query: 436 GHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGA 495
           G    S    P  +ETLK+   V   CG +H+AA+         +NG     L+TWG G 
Sbjct: 135 G----SKAGKPARIETLKQ-TIVQIGCGDFHSAAL--------SANG----DLYTWGGGG 177

Query: 496 ----EGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
                GQLGHG       P  VK  D+I   K +CG    +AL   G+++S GS  YG+ 
Sbjct: 178 RDYNRGQLGHGHLNDVETPQIVK--DNI--VKFSCGGYHMMALDKDGELWSWGSGMYGET 233

Query: 552 GSPGSTGKF-------PTRIEGNIKHRYIED-------------IACGSYHIAVVSSKSE 591
           G     G+F         +I  N KH  I+D             I+ G +H  ++S+K  
Sbjct: 234 GQ----GEFQDSLLPKKVKINFNQKHIIIDDIFVQNKQESTIKEISLGGHHSLLLSNKGI 289

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHS 650
           VY  G   +GQLG    EN+    LV  +  K +  +  G N +  +  H  V    H+
Sbjct: 290 VYACGYAQHGQLGIKATENQNKFQLVIGISGKTIVQIAAGWNHSIVLTSHSDVYTCGHN 348


>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 967

 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 192/434 (44%), Gaps = 29/434 (6%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +  + + + CGS+H V V   G +++ G    G+LGH  +  
Sbjct: 14  LGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGH--DKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPR 394
              P+ + AL+   I  V+CGE HT A+   G +++WG  ++  +GL    +E    +PR
Sbjct: 72  RRKPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGL--STAEEYIRVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +   +  +QI  + CG  H+ A++    +F++G   +G LG G +      PR +++L 
Sbjct: 130 NIKS-LSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLS 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +     + G  H+ A+       SG+       +F WG    GQLG  D   R VP  +
Sbjct: 189 GIPFAHIAAGGGHSFALT-----ISGA-------IFGWGRNKFGQLGLTDETDRNVPALL 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K         + CG   T ALT  G VF+ G+  YGQLG   +  +   R    +    +
Sbjct: 237 KSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSIV 296

Query: 574 EDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
             IACG  H +A V S   +Y++G G NGQLG G   N+++P  V+         V    
Sbjct: 297 TQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSPFTVKGNWLTYEDYVRHLP 356

Query: 633 NFTAAICLHKGVSIADHSIC-----SGCRNQFNFRR----RRHNCYNCGLVYCKLCSSKK 683
                 CL +  S  D S         C    +FRR    R+    + G++   L  S  
Sbjct: 357 EANGCYCLKRIYSGGDQSFAHYITIQNCHPPDDFRRCNCSRKIRTLDEGVIQRWLNYSLG 416

Query: 684 SMKTALAPEINKPY 697
            +   +  EI+K +
Sbjct: 417 RLPLEIVNEIDKVF 430



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 152/326 (46%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D     N+  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   + S   P +V G ++   I ++ CG  HT A+   G++F++G   +G 
Sbjct: 60  -CNDLGQLGH--DKSRRKPEQV-GALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQ 115

Query: 435 LGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           +G         VPR +++L +++ V  +CG  H+ A+ +               +F+WG 
Sbjct: 116 IGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSK------------DSDIFSWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G + +    P  +K    I F  +A G   + ALT +G +F  G   +GQLG
Sbjct: 164 NQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
               T +    +  +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEV 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T A 
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTLAF 309



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/264 (33%), Positives = 130/264 (49%), Gaps = 26/264 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNG-VEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           G VF WG          AV G + +S+A+     +P+ ++S   +    +ACG  H++ +
Sbjct: 103 GQVFSWGH---------AVYGQIGLSTAEEY-IRVPRNIKSLSDVQIVQVACGHHHSLAL 152

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVS-YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           +K   IFSWG+   G+LG G+E      P+ I +L+G     +A G  H+ A+T+SG ++
Sbjct: 153 SKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIF 212

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            WG   +  G LG   E    +P  +   +   +I  ICCG  HTAA+T  G +FTFG G
Sbjct: 213 GWGR--NKFGQLGLTDETDRNVPALLKS-LRSQKIIHICCGEDHTAALTKEGGVFTFGAG 269

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            +G LGH   +    PR+V  L        +CG  HT A V            SS ++++
Sbjct: 270 GYGQLGHNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVP-----------SSGRIYS 318

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVK 514
           +G G  GQLG G    R  P  VK
Sbjct: 319 FGLGGNGQLGTGSTINRKSPFTVK 342



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 12/175 (6%)

Query: 488 LFTWGDGAEGQLGHGDAEPRVV--PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
           +  WG+ + GQLG G  +  VV  P       + +   V CG   T+ +   G V++ G 
Sbjct: 1   MLCWGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGC 60

Query: 546 ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
            D GQLG   S  K P ++ G +  + I  ++CG  H   ++ K +V++WG    GQ+G 
Sbjct: 61  NDLGQLGHDKSRRK-PEQV-GALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGL 118

Query: 606 GDNENK-QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQF 659
              E   + P  +++L D Q+  V CG + + A+         D  I S  +NQ+
Sbjct: 119 STAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALS-------KDSDIFSWGQNQY 166


>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
           guttata]
          Length = 991

 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 156/326 (47%), Gaps = 24/326 (7%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + + CG +H V V   G +++ G    G+LGH  E     P+ + AL+  NI  V+CGE
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKARKRPEHVGALDAQNIVAVSCGE 93

Query: 358 FHTCAVTLSGDLYTWG---DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            HT A+   G +Y WG   DG   LGL G  +E    +PR +    E +QI  + CG +H
Sbjct: 94  AHTLALNDKGQVYAWGLATDG--QLGLPG--TEECVRVPRNIRSLSE-IQIVQVACGYYH 148

Query: 415 TAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           + A++   ++F++G   +G LG G +    + P+ +++L  +     + G  H+  +   
Sbjct: 149 SLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLT-- 206

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
                      S  +F WG    GQLG  D   R VP  +K         + CG   T A
Sbjct: 207 ----------LSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAA 256

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHI-AVVSSKSEV 592
           LT  G VF+ G+  YGQLG   ++ +   R    +    +  I CG  H  A V S   +
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSVVTQITCGRQHTTAFVPSSGRI 316

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVE 618
           Y++G G NGQLG G   N+++P  V+
Sbjct: 317 YSFGLGGNGQLGTGTTSNRKSPFTVK 342



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 155/326 (47%), Gaps = 21/326 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E +   P  V G ++   I ++ CG  HT A+   G+++ +G  T G 
Sbjct: 60  -CNDLGQLGH--EKARKRPEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR + +L E++ V  +CG +H+ A+      + GS      ++F+WG 
Sbjct: 116 LGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLAL------SKGS------EVFSWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G + + +  P  +K    I F ++A G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + +  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L    V  + CG   T A 
Sbjct: 284 NPRKVFELMGSVVTQITCGRQHTTAF 309



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 116/230 (50%), Gaps = 15/230 (6%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDA 344
           +P+ + S   +    +ACG  H++ ++K  ++FSWG+   G+LG G E    + P++I +
Sbjct: 127 VPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIKS 186

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           L G     +A G  H+  +TLSG ++ WG   +  G LG   +   ++P  +   +   +
Sbjct: 187 LLGIPFAQIAAGGAHSFVLTLSGAIFGWGR--NKFGQLGLNDDNDRYVPTLLK-SLRSQK 243

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +  ICCG  HTAA+T  G +FTFG G +G LGH   S    PR+V  L        +CG 
Sbjct: 244 VVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSVVTQITCGR 303

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
            HT A V            SS +++++G G  GQLG G    R  P  VK
Sbjct: 304 QHTTAFVP-----------SSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 129/279 (46%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    +   P  V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKARKRPEHVGALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG   +GQLG    E  V VP  ++   +I   +VACG+  ++AL+   +VFS G   
Sbjct: 106 YAWGLATDGQLGLPGTEECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNK 165

Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG      K   P  I+  +   + + IA G  H  V++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGYEYKKQTSPQMIKSLLGIPFAQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D+ ++  PTL+++LR ++V  + CG + TAA+    GV
Sbjct: 225 NDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGV 263



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSD---DISFCKVACGHSITIALTATGQVFSMG 544
           +  WG+ + GQLG G  +  +V L  + SD   +     V CG   T+ +   G V++ G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIV-LEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
             D GQLG   +  K P  + G +  + I  ++CG  H   ++ K +VY WG   +GQLG
Sbjct: 60  CNDLGQLGHEKAR-KRPEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLG 117

Query: 605 -HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSI 646
             G  E  + P  + +L + Q+  V CG  +  ++ L KG  +
Sbjct: 118 LPGTEECVRVPRNIRSLSEIQIVQVACG--YYHSLALSKGSEV 158


>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
           [Xenopus laevis]
 gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
          Length = 1050

 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/325 (32%), Positives = 165/325 (50%), Gaps = 22/325 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG KH + + + GQ++S G    G+LGH  E   ++P  +  L   +I  +ACG+
Sbjct: 36  VKEVACGGKHTLFLMEDGQVYSCGWNGEGQLGHSHEG--THPAPVATLAEEHIKHIACGQ 93

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHW--IPRKVSGQMEGLQISSICCGPWHT 415
            H+ A++L G+LY+WG G  N G LG  + + H+  IPR +  ++   +I  + CG  H 
Sbjct: 94  SHSLALSLQGNLYSWGAG--NDGQLGHAT-VEHYSRIPRIIK-KLSQQKIQQMSCGDDHC 149

Query: 416 AAITSAGKLFTFGDGTFGALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            A+   G+LFT+G  T G LG G+   S S P++V++L+ +     + G  H+ A+    
Sbjct: 150 LALGDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFAL---- 205

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
              SG+       +F WG  + GQLG  D + +  P  VK         ++CG   T  L
Sbjct: 206 -SLSGA-------VFGWGKNSAGQLGLNDEQVKETPCHVKPLRTHKVVYISCGEEHTAIL 257

Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVY 593
           T  G +F+ G+   GQLG      +   R    +    +  IACG  H +A V S   +Y
Sbjct: 258 TKAGGLFTFGAGGSGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLAFVPSSGTLY 317

Query: 594 TWGKGANGQLGHGDNENKQTPTLVE 618
            +G G  GQLG G   N + PT+V+
Sbjct: 318 AFGCGDLGQLGTGHENNVKCPTVVK 342



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 141/273 (51%), Gaps = 21/273 (7%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGE 357
           + IACG  H++ ++ QG ++SWG G+ G+LGH  VE     P++I  L+   I  ++CG+
Sbjct: 87  KHIACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGD 146

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGL-LGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
            H  A+   G L+TWG   H  LGL  G +S+ S   P+KV   +EG+ ++ +  G  H+
Sbjct: 147 DHCLALGDDGQLFTWGQNTHGQLGLGNGFISQSS---PQKVKS-LEGIPLAQVTAGGSHS 202

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            A++ +G +F +G  + G LG  D      P  V+ L+  K V  SCG  HTA + +  G
Sbjct: 203 FALSLSGAVFGWGKNSAGQLGLNDEQVKETPCHVKPLRTHKVVYISCGEEHTAILTKAGG 262

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
                       LFT+G G  GQLGH      + P  V         ++ACG   T+A  
Sbjct: 263 ------------LFTFGAGGSGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLAFV 310

Query: 536 -ATGQVFSMGSADYGQLGSPGSTG-KFPTRIEG 566
            ++G +++ G  D GQLG+      K PT ++G
Sbjct: 311 PSSGTLYAFGCGDLGQLGTGHENNVKCPTVVKG 343



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 153/327 (46%), Gaps = 23/327 (7%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  + G+LG  H ++  VS P        + +  VACG  HT  +   G +Y+ G 
Sbjct: 1   MLCWGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             +  G LG   E +H  P  V+   E   I  I CG  H+ A++  G L+++G G  G 
Sbjct: 60  -WNGEGQLGHSHEGTH--PAPVATLAEE-HIKHIACGQSHSLALSLQGNLYSWGAGNDGQ 115

Query: 435 LGHGDRSSTS-VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LGH      S +PR ++ L + K    SCG  H  A+        G +G    +LFTWG 
Sbjct: 116 LGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLAL--------GDDG----QLFTWGQ 163

Query: 494 GAEGQLGHGDAE-PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G+    +  P  VK  + I   +V  G S + AL+ +G VF  G    GQLG
Sbjct: 164 NTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            +     + P  ++    H+ +  I+CG  H A+++    ++T+G G +GQLGH    N+
Sbjct: 224 LNDEQVKETPCHVKPLRTHKVVY-ISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHNE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAI 638
             P  V  L   +V  + CG   T A 
Sbjct: 283 INPRRVLELMGSEVSQIACGRKHTLAF 309



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 124/263 (47%), Gaps = 24/263 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+++ WG G  +G LG A   VE  S       +P++++       Q ++CG  H + + 
Sbjct: 103 GNLYSWGAG-NDGQLGHAT--VEHYSR------IPRIIKKLSQQKIQQMSCGDDHCLALG 153

Query: 313 KQGQIFSWGEGSGGKLGHGV-EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ+F+WG+ + G+LG G      S P+ + +L G  +  V  G  H+ A++LSG ++ 
Sbjct: 154 DDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   ++ G LG   E     P  V   +   ++  I CG  HTA +T AG LFTFG G 
Sbjct: 214 WGK--NSAGQLGLNDEQVKETPCHVK-PLRTHKVVYISCGEEHTAILTKAGGLFTFGAGG 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH    +   PR V  L   +    +CG  HT A V            SS  L+ +
Sbjct: 271 SGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLAFVP-----------SSGTLYAF 319

Query: 492 GDGAEGQLGHGDAEPRVVPLCVK 514
           G G  GQLG G       P  VK
Sbjct: 320 GCGDLGQLGTGHENNVKCPTVVK 342



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 123/268 (45%), Gaps = 35/268 (13%)

Query: 200 RAESVSKSL--NFVASGGLDDANSRSSTADSF----RISLSSAVSSSSQGSCHEDF-DGL 252
           ++ S++ SL  N  + G  +D     +T + +    RI    +     Q SC +D    L
Sbjct: 93  QSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLAL 152

Query: 253 GD---VFIWGE------GLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIAC 303
           GD   +F WG+      GLGNG +  +                P+ ++S   +    +  
Sbjct: 153 GDDGQLFTWGQNTHGQLGLGNGFISQSS---------------PQKVKSLEGIPLAQVTA 197

Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAV 363
           G  H+  ++  G +F WG+ S G+LG   E     P  +  L    +  ++CGE HT  +
Sbjct: 198 GGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKETPCHVKPLRTHKVVYISCGEEHTAIL 257

Query: 364 TLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAG 422
           T +G L+T+G G    G LG  S  +   PR+V  ++ G ++S I CG  HT A + S+G
Sbjct: 258 TKAGGLFTFGAG--GSGQLGHDSLHNEINPRRVL-ELMGSEVSQIACGRKHTLAFVPSSG 314

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVE 450
            L+ FG G  G LG G  ++   P  V+
Sbjct: 315 TLYAFGCGDLGQLGTGHENNVKCPTVVK 342


>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Anolis carolinensis]
          Length = 1060

 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 156/326 (47%), Gaps = 24/326 (7%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + + CG +H V V   G +++ G    G+LGH  E     P+ + AL+  NI  V+CGE
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKRPEQVGALDAQNIVAVSCGE 93

Query: 358 FHTCAVTLSGDLYTWG---DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            HT  +   G +Y WG   DG   LGL G  +E    +PR +   +  +QI  + CG +H
Sbjct: 94  AHTLTLNDKGQVYAWGFAADG--QLGLPG--TEEYTRVPRNIKS-LSDVQIVQVACGYYH 148

Query: 415 TAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           + A++   ++F++G    G LG G D    + P+ +++L  +     + G  H+ A+   
Sbjct: 149 SLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALT-- 206

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
                      S  +F WG    GQLG  D   R VP  +K         ++CG   T A
Sbjct: 207 ----------LSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAA 256

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHI-AVVSSKSEV 592
           LT  G VF+ G+  YGQLG   +  +   R    +    +  IACG  H  A V S   +
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRI 316

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVE 618
           Y++G G NGQLG G   N+++P  V+
Sbjct: 317 YSFGLGGNGQLGMGSTSNRKSPFPVK 342



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 159/327 (48%), Gaps = 21/327 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  +      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V G ++   I ++ CG  HT  +   G+++ +G    G 
Sbjct: 60  -CNDLGQLGH--EKSRKRPEQV-GALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G    T VPR +++L +++ V  +CG +H+ A+      + GS      ++F+WG 
Sbjct: 116 LGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLAL------SKGS------EVFSWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F ++A G + + ALT +G VF  G   +GQLG
Sbjct: 164 NKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I+CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAIC 639
            P  V  L    V  + CG   T+A  
Sbjct: 284 NPRKVFELMGNIVTQIACGRQHTSAFV 310



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 130/263 (49%), Gaps = 24/263 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG    +G LG  + G E  +       +P+ ++S   +    +ACG  H++ ++
Sbjct: 103 GQVYAWGFA-ADGQLG--LPGTEEYTR------VPRNIKSLSDVQIVQVACGYYHSLALS 153

Query: 313 KQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           K  ++FSWG+   G+LG G +    + P+LI +L G     +A G  H+ A+TLSG ++ 
Sbjct: 154 KGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   +  G LG   E   ++P  +   +   +I  I CG  HTAA+T  G +FTFG G 
Sbjct: 214 WGR--NKFGQLGLNDENDRYVPNLLKS-LRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           +G LGH        PR+V  L        +CG  HT+A V            S+ +++++
Sbjct: 271 YGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVP-----------STGRIYSF 319

Query: 492 GDGAEGQLGHGDAEPRVVPLCVK 514
           G G  GQLG G    R  P  VK
Sbjct: 320 GLGGNGQLGMGSTSNRKSPFPVK 342



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 126/276 (45%), Gaps = 19/276 (6%)

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG+       LG + E     PR+ +  +    +  + CG  HT  +   G ++T G   
Sbjct: 4   WGNASFGQLGLGGIDEEVVLEPRRCNFFLNK-TVRDVGCGLRHTVFVLDDGTVYTCGCND 62

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH    S   P +V  L     V  SCG  HT  + +              +++ W
Sbjct: 63  LGQLGH--EKSRKRPEQVGALDAQNIVAVSCGEAHTLTLND------------KGQVYAW 108

Query: 492 GDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G  A+GQLG  G  E   VP  +K   D+   +VACG+  ++AL+   +VFS G   +GQ
Sbjct: 109 GFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQ 168

Query: 551 LGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           LG      K   P  I+  +   + + IA G  H   ++    V+ WG+   GQLG  D 
Sbjct: 169 LGLGYDLKKQTSPQLIKSLLGIPFGQ-IAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDE 227

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 228 NDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGV 263



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 7/162 (4%)

Query: 488 LFTWGDGAEGQLGHGDAEPRVV--PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
           +  WG+ + GQLG G  +  VV  P       + +   V CG   T+ +   G V++ G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 546 ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG- 604
            D GQLG   S  K P ++ G +  + I  ++CG  H   ++ K +VY WG  A+GQLG 
Sbjct: 61  NDLGQLGHEKSR-KRPEQV-GALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGL 118

Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSI 646
            G  E  + P  +++L D Q+  V CG  +  ++ L KG  +
Sbjct: 119 PGTEEYTRVPRNIKSLSDVQIVQVACG--YYHSLALSKGSEV 158


>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 894

 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 170/353 (48%), Gaps = 33/353 (9%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P   E    L    IAC  K  +++++ G++++              +D   P+L+  L 
Sbjct: 485 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 534

Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
             NI  +A      H  A+  +G++Y+WG G  + G LG    +    P+ +S   G+  
Sbjct: 535 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 592

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  +  I CG  ++AAIT+ G+L+T+G G +G LGHG     ++P  V  LK LK +  +
Sbjct: 593 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 652

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
           CG          +G         + ++++WGDG  G+LG G ++    P  ++   D+  
Sbjct: 653 CG----------SGDAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDV 702

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGS 580
            KV CG   +IALT  GQV+S G  D  +LG       ++P  +EG ++ + + D+A GS
Sbjct: 703 VKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAAGS 761

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
            H   ++  SEV++W  G+N Q  H D     K  P  +  L  K +  + CG
Sbjct: 762 THCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 812



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 25/329 (7%)

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
           NG   + A   D L P++++     +   IA  S   H + +   G+++SWG G GG+LG
Sbjct: 512 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 571

Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           HG    +  PK+I A +G     ++  +ACG  ++ A+T  G+LYTWG G  N G LG  
Sbjct: 572 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 629

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           S     IP  V+G ++GL++  + CG     T A+T  G+++++GDG +G LG G     
Sbjct: 630 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGC 688

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             P+ +E L++L  V   CG   + A+ +              ++++WG G   +LGHG 
Sbjct: 689 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 736

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
            E    P  ++         VA G +  +ALT   +V S GS D  Q   +   T   P 
Sbjct: 737 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 796

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            + G +  ++I  IACG       SS SE
Sbjct: 797 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 824



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 163/329 (49%), Gaps = 34/329 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++  WG      +G    A+V  P   + L    +  +AC E     ++ +G +YT    
Sbjct: 467 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYT---- 517

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEG--LQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
                   Q        P+ V G      ++I++   G  H  A+ + G+++++G G  G
Sbjct: 518 --------QAYNSDTLAPQLVQGLASRNIVKIAAHSDGH-HYLALAATGEVYSWGCGDGG 568

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
            LGHGD    +VP     L+E K + A  G      +V +A  ++ S  ++++ +L+TWG
Sbjct: 569 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 619

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
            G  G+LGHG +E   +P+ V     +    VACG   + T+A+T  GQV+S G  DYG+
Sbjct: 620 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGK 679

Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG  GS G K P  IE  ++   +  + CGS     ++   +VY+WGKG N +LGHG  E
Sbjct: 680 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 738

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + + P L+E L+ K+V  V  GS    A+
Sbjct: 739 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 767



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +++ S G  +      G+V+ WG G G  L  G  + V +       A   K     VV 
Sbjct: 541 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 597

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
               IACGS ++  +T +G++++WG G+ G+LGHG   D + P L+  L G  +  VAC 
Sbjct: 598 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 654

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G+  T AVT +G +++WGDG  + G LG+        P+ +  +++ L +  + CG   
Sbjct: 655 SGDAQTLAVTDNGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 711

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           + A+T  G+++++G G    LGHG       P+ +E L+  K +  + G  H  A+ E
Sbjct: 712 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 769



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +           PK++E    LD   + CGS+ ++ +T
Sbjct: 667 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 716

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K GQ++SWG+G   +LGHG E  V YPKL++ L G  +  VA G  H  A+T   ++++W
Sbjct: 717 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 776

Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G  D   +   L     ++   P  + G ++   I  I CGP  + A +S
Sbjct: 777 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 821


>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Anolis carolinensis]
          Length = 1052

 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 156/326 (47%), Gaps = 24/326 (7%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + + CG +H V V   G +++ G    G+LGH  E     P+ + AL+  NI  V+CGE
Sbjct: 36  VRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKRPEQVGALDAQNIVAVSCGE 93

Query: 358 FHTCAVTLSGDLYTWG---DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            HT  +   G +Y WG   DG   LGL G  +E    +PR +   +  +QI  + CG +H
Sbjct: 94  AHTLTLNDKGQVYAWGFAADG--QLGLPG--TEEYTRVPRNIKS-LSDVQIVQVACGYYH 148

Query: 415 TAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           + A++   ++F++G    G LG G D    + P+ +++L  +     + G  H+ A+   
Sbjct: 149 SLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALT-- 206

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
                      S  +F WG    GQLG  D   R VP  +K         ++CG   T A
Sbjct: 207 ----------LSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAA 256

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHI-AVVSSKSEV 592
           LT  G VF+ G+  YGQLG   +  +   R    +    +  IACG  H  A V S   +
Sbjct: 257 LTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVPSTGRI 316

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVE 618
           Y++G G NGQLG G   N+++P  V+
Sbjct: 317 YSFGLGGNGQLGMGSTSNRKSPFPVK 342



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 159/327 (48%), Gaps = 21/327 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  +      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V G ++   I ++ CG  HT  +   G+++ +G    G 
Sbjct: 60  -CNDLGQLGH--EKSRKRPEQV-GALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G    T VPR +++L +++ V  +CG +H+ A+      + GS      ++F+WG 
Sbjct: 116 LGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLAL------SKGS------EVFSWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G D + +  P  +K    I F ++A G + + ALT +G VF  G   +GQLG
Sbjct: 164 NKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + I  I+CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAIC 639
            P  V  L    V  + CG   T+A  
Sbjct: 284 NPRKVFELMGNIVTQIACGRQHTSAFV 310



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 130/263 (49%), Gaps = 24/263 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG    +G LG  + G E  +       +P+ ++S   +    +ACG  H++ ++
Sbjct: 103 GQVYAWGFA-ADGQLG--LPGTEEYTR------VPRNIKSLSDVQIVQVACGYYHSLALS 153

Query: 313 KQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           K  ++FSWG+   G+LG G +    + P+LI +L G     +A G  H+ A+TLSG ++ 
Sbjct: 154 KGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   +  G LG   E   ++P  +   +   +I  I CG  HTAA+T  G +FTFG G 
Sbjct: 214 WGR--NKFGQLGLNDENDRYVPNLLKS-LRSQKIVYISCGEDHTAALTKEGGVFTFGAGG 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           +G LGH        PR+V  L        +CG  HT+A V            S+ +++++
Sbjct: 271 YGQLGHNSTGHEINPRKVFELMGNIVTQIACGRQHTSAFVP-----------STGRIYSF 319

Query: 492 GDGAEGQLGHGDAEPRVVPLCVK 514
           G G  GQLG G    R  P  VK
Sbjct: 320 GLGGNGQLGMGSTSNRKSPFPVK 342



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 126/276 (45%), Gaps = 19/276 (6%)

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG+       LG + E     PR+ +  +    +  + CG  HT  +   G ++T G   
Sbjct: 4   WGNASFGQLGLGGIDEEVVLEPRRCNFFLNK-TVRDVGCGLRHTVFVLDDGTVYTCGCND 62

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH    S   P +V  L     V  SCG  HT  + +              +++ W
Sbjct: 63  LGQLGH--EKSRKRPEQVGALDAQNIVAVSCGEAHTLTLND------------KGQVYAW 108

Query: 492 GDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G  A+GQLG  G  E   VP  +K   D+   +VACG+  ++AL+   +VFS G   +GQ
Sbjct: 109 GFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQ 168

Query: 551 LGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           LG      K   P  I+  +   + + IA G  H   ++    V+ WG+   GQLG  D 
Sbjct: 169 LGLGYDLKKQTSPQLIKSLLGIPFGQ-IAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDE 227

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            ++  P L+++LR +++  + CG + TAA+    GV
Sbjct: 228 NDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGV 263



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 7/162 (4%)

Query: 488 LFTWGDGAEGQLGHGDAEPRVV--PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
           +  WG+ + GQLG G  +  VV  P       + +   V CG   T+ +   G V++ G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGC 60

Query: 546 ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG- 604
            D GQLG   S  K P ++ G +  + I  ++CG  H   ++ K +VY WG  A+GQLG 
Sbjct: 61  NDLGQLGHEKSR-KRPEQV-GALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGL 118

Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSI 646
            G  E  + P  +++L D Q+  V CG  +  ++ L KG  +
Sbjct: 119 PGTEEYTRVPRNIKSLSDVQIVQVACG--YYHSLALSKGSEV 158


>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Ailuropoda melanoleuca]
          Length = 1129

 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 164/324 (50%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE
Sbjct: 115 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIVHVACGE 172

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  
Sbjct: 173 SHSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 229

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+ + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+     
Sbjct: 230 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 284

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             SG+       +F WG    GQLG  D E R  P  VK+        ++CG   T  LT
Sbjct: 285 SLSGA-------VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 337

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
            +G VF+ G+   GQLG      +   R    +    +  IACG  H +A V S   +Y 
Sbjct: 338 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 397

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G GA GQLG G   N + P+ V+
Sbjct: 398 FGCGARGQLGTGHTCNVKCPSPVK 421



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  ++  VACG  H+  +   G++YT   
Sbjct: 80  MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYT--C 137

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
           G++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 138 GLNTKGQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 194

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 195 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 242

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 243 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 302

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 303 LSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 361

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 362 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 397



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 127/251 (50%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 182 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 232

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 233 ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 292

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           W  G++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 293 W--GMNNAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 349

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 350 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 398

Query: 492 GDGAEGQLGHG 502
           G GA GQLG G
Sbjct: 399 GCGARGQLGTG 409



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 235 GQFFTWGKN-SHGQLG---LGKEFPSQAS-----PQRVRSLEGIPLAQVAAGGAHSFALS 285

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 286 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 345

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 346 GAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 402

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 403 RGQLGTGHTCNVKCPSPVK 421


>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
 gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
          Length = 477

 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 166/334 (49%), Gaps = 32/334 (9%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN-IHMVACGEFHTCAVTLSGDLYTWG-D 374
           + +WG    G+LG   E     PKLI++L   N I  V CG  H+  +T SG+L  WG  
Sbjct: 10  VVAWGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYG 69

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
           G   LGL G + +I   IPR ++     + +S   C   H+AAI   G+L+T+G    G 
Sbjct: 70  GCGQLGL-GDLKDIV--IPRVMTSIKNVINVS---CSDRHSAAILEDGRLYTWGCNKSGK 123

Query: 435 LGHGDRSSTS------VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           LG G  +          P+ VE L   K +  SCG +HTA + ++             K 
Sbjct: 124 LGIGSLNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDL------------NKA 171

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           +TWG G +G+LGHGD      P  ++    +S   + CG   T  L   G+V+  G   +
Sbjct: 172 YTWGLGMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAF 231

Query: 549 GQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH-- 605
           G+LG       + P  ++G++ ++ I++++ G  H AV+++K +VYTWG+G  G+LGH  
Sbjct: 232 GKLGFGSKEDIYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWGQG--GRLGHIY 289

Query: 606 -GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G   +  +P LVE L      ++ CG + T  I
Sbjct: 290 NGPEPDILSPKLVEKLNSIIAVNISCGHSHTVVI 323



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 179/362 (49%), Gaps = 29/362 (8%)

Query: 287 PKVLESTVVLD-AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
           PK++ES    +  + + CG  H+ ++T  G++  WG G  G+LG G   D+  P+++ ++
Sbjct: 32  PKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYGGCGQLGLGDLKDIVIPRVMTSI 91

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWG---DGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
              N+  V+C + H+ A+   G LYTWG    G   +G L      +     ++  ++  
Sbjct: 92  --KNVINVSCSDRHSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLN 149

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
            ++  + CG +HTA +T   K +T+G G  G LGHGD +    P+ +E+L  L      C
Sbjct: 150 EKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVC 209

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS-DDISF 521
           G  HTA +            L++ K++  G GA G+LG G  E   +P  ++ S  + S 
Sbjct: 210 GGHHTAIL------------LNNGKVYFCGGGAFGKLGFGSKEDIYIPKLLQGSLTNKSI 257

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLG----SPGSTGKFPTRIEGNIKHRYIEDIA 577
            +V+ G+  +  +T  G+V++ G    G+LG     P      P  +E  +      +I+
Sbjct: 258 KEVSLGYQHSAVITTKGKVYTWGQG--GRLGHIYNGPEPDILSPKLVE-KLNSIIAVNIS 314

Query: 578 CGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK-QTPTLVEALRDKQVKSVVCGSNFTA 636
           CG  H  V+S+  +VY WG   N  LGHG  ++K   PTL   L++K +  V CG   T 
Sbjct: 315 CGHSHTVVISNIGDVYAWGVTRN--LGHGVIDSKPNDPTLHPILQNKNIVQVSCGKTHTI 372

Query: 637 AI 638
           A+
Sbjct: 373 AL 374



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 125/254 (49%), Gaps = 24/254 (9%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+++E  +      ++CGS H   +T   + ++WG G  G+LGHG   DV  PKLI++L 
Sbjct: 141 PQLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGRLGHGDTNDVYTPKLIESLA 200

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
           G ++  + CG  HT  +  +G +Y  G G    G LG  S+   +IP+ + G +    I 
Sbjct: 201 GLSVKNIVCGGHHTAILLNNGKVYFCGGGA--FGKLGFGSKEDIYIPKLLQGSLTNKSIK 258

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGH---GDRSSTSVPREVETLKELKTVMASCG 463
            +  G  H+A IT+ GK++T+G G  G LGH   G       P+ VE L  +  V  SCG
Sbjct: 259 EVSLGYQHSAVITTKGKVYTWGQG--GRLGHIYNGPEPDILSPKLVEKLNSIIAVNISCG 316

Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG--DAEPRVVPLCVKVSDDISF 521
             HT  I  +              ++ W  G    LGHG  D++P   P    +  + + 
Sbjct: 317 HSHTVVISNIG------------DVYAW--GVTRNLGHGVIDSKPN-DPTLHPILQNKNI 361

Query: 522 CKVACGHSITIALT 535
            +V+CG + TIAL+
Sbjct: 362 VQVSCGKTHTIALS 375



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 114/247 (46%), Gaps = 23/247 (9%)

Query: 233 LSSAVSSSSQGSCHED-FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE 291
           L+  V   S GS H      L   + WG G+  G LG           D  D   PK++E
Sbjct: 148 LNEKVIKVSCGSFHTACLTDLNKAYTWGLGM-QGRLG---------HGDTNDVYTPKLIE 197

Query: 292 STVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLID-ALNGSNI 350
           S   L  ++I CG  H  ++   G+++  G G+ GKLG G + D+  PKL+  +L   +I
Sbjct: 198 SLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFGSKEDIYIPKLLQGSLTNKSI 257

Query: 351 HMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV---SEISHWIPRKVSGQMEGLQISS 407
             V+ G  H+  +T  G +YTWG G    G LG +    E     P+ V  ++  +   +
Sbjct: 258 KEVSLGYQHSAVITTKGKVYTWGQG----GRLGHIYNGPEPDILSPKLVE-KLNSIIAVN 312

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWH 466
           I CG  HT  I++ G ++ +G      LGHG   S  + P     L+    V  SCG  H
Sbjct: 313 ISCGHSHTVVISNIGDVYAWG--VTRNLGHGVIDSKPNDPTLHPILQNKNIVQVSCGKTH 370

Query: 467 TAAIVEV 473
           T A+ ++
Sbjct: 371 TIALSDI 377


>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
           familiaris]
          Length = 1050

 Score =  152 bits (385), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 164/324 (50%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIVHVACGE 93

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+ + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+     
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             SG+       +F WG    GQLG  D E R  P  VK+        ++CG   T  LT
Sbjct: 206 SLSGA-------VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
            +G VF+ G+   GQLG      +   R    +    +  IACG  H +A V S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G GA GQLG G   N + P+ V+
Sbjct: 319 FGCGAKGQLGTGHTCNVKCPSPVK 342



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  ++  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -LNTKGQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 128/251 (50%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           W  G++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 W--GMNNAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA+GQLG G
Sbjct: 320 GCGAKGQLGTG 330



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG---LGKEYPSQAS-----PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 267 GAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 76/163 (46%), Gaps = 31/163 (19%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGN-GLLGGAVNG 273
           G+  A   +  A SF +SLS AV                    +G G+ N G LG +   
Sbjct: 189 GIPLAQVAAGGAHSFALSLSGAV--------------------FGWGMNNAGQLGLS--- 225

Query: 274 VEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
                 DR      K+L +  V+    I+CG +H  ++TK G +F++G GS G+LGH   
Sbjct: 226 ---DEEDRESPCHVKLLRTQKVV---YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDG 375
            D   P+ +  L GS +  +ACG  HT A V  SG +Y +G G
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322


>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
           domestica]
          Length = 1051

 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 176/362 (48%), Gaps = 41/362 (11%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + +ACG  H++ + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE 
Sbjct: 38  KEVACGGNHSIFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGES 95

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVS-EISHWIPR---KVSGQMEGLQISSICCGPWH 414
           H+ A++  G L++WG G  + G LG  + E S  IPR   K++ QM    I  + CG WH
Sbjct: 96  HSLALSDQGQLFSWGAG--SDGQLGHTTTEDSVAIPRLIKKLNQQM----ILQVSCGNWH 149

Query: 415 TAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
             A+ + G+ FT+G    G LG G +  S + P+ V++L+ +     + G  H+ A+   
Sbjct: 150 CMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFAL--- 206

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
               SG+       +F WG    GQLG  D   R  P  VK+        ++CG   T  
Sbjct: 207 --SLSGA-------VFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAV 257

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEV 592
           LT +G VF+ G+  +GQLG      +   R    +    +  IACG  H +A V S   +
Sbjct: 258 LTKSGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLI 317

Query: 593 YTWGKGANGQLGHGDNENKQTPTLV---------------EALRDKQVKSVVCGSNFTAA 637
           Y +G GA GQLG G   N + P+ V               ++ +   VK +  G + T  
Sbjct: 318 YAFGCGARGQLGTGHTCNVKCPSPVKGHWAAHNGQLSSRADSFKYHIVKHIFSGGDQTFV 377

Query: 638 IC 639
           +C
Sbjct: 378 LC 379



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 160/331 (48%), Gaps = 21/331 (6%)

Query: 320 WGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNL 379
           W  G  G +   ++  V+ P+    ++  +I  VACG  H+  +   G++YT G  ++  
Sbjct: 7   WSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCG--LNTK 64

Query: 380 GLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGD 439
           G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G LGH  
Sbjct: 65  GQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTT 121

Query: 440 -RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ 498
              S ++PR ++ L +   +  SCG WH  A+             +  + FTWG    GQ
Sbjct: 122 TEDSVAIPRLIKKLNQQMILQVSCGNWHCMALA------------ADGQFFTWGQNRHGQ 169

Query: 499 LGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGST 557
           LG G   P +  P  VK  + I   +VA G + + AL+ +G VF  G  + GQLG    T
Sbjct: 170 LGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDET 229

Query: 558 GK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTL 616
            +  P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++  P  
Sbjct: 230 DRQSPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRR 288

Query: 617 VEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
           V  L   +V  + CG   T A     G+  A
Sbjct: 289 VLELMGSEVTQIACGRQHTLAFVPSSGLIYA 319



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ ++S   +    +A G  H+  ++
Sbjct: 157 GQFFTWGQN-RHGQLG---LGKEFPSQAS-----PQRVKSLEGIPLAQVAAGGAHSFALS 207

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 267

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 268 GAG--SFGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 324

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 325 RGQLGTGHTCNVKCPSPVK 343


>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
          Length = 1050

 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 164/324 (50%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIVHVACGE 93

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+ + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+     
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             SG+       +F WG    GQLG  D E R  P  VK+        ++CG   T  LT
Sbjct: 206 SLSGA-------VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
            +G VF+ G+   GQLG      +   R    +    +  IACG  H +A V S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G GA GQLG G   N + P+ V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  ++  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -LNTKGQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 127/251 (50%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           W  G++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 W--GMNNAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA GQLG G
Sbjct: 320 GCGARGQLGTG 330



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG---LGKEFPSQAS-----PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 267 GAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 76/163 (46%), Gaps = 31/163 (19%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGN-GLLGGAVNG 273
           G+  A   +  A SF +SLS AV                    +G G+ N G LG +   
Sbjct: 189 GIPLAQVAAGGAHSFALSLSGAV--------------------FGWGMNNAGQLGLS--- 225

Query: 274 VEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
                 DR      K+L +  V+    I+CG +H  ++TK G +F++G GS G+LGH   
Sbjct: 226 ---DEEDRESPCHVKLLRTQKVV---YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDG 375
            D   P+ +  L GS +  +ACG  HT A V  SG +Y +G G
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322


>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
 gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
          Length = 1058

 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 177/368 (48%), Gaps = 28/368 (7%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +++ WG    +G LG  + G+E         L P+ +  T     Q +ACG +H + +T 
Sbjct: 6   ELYCWGST-SHGQLG--LGGIE-----DEQILTPRQIPWTPDTAVQQVACGHRHTLFLTA 57

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G++++ G     +LGH  +     P+LI  L    I  ++CG  H+ A++  G + +WG
Sbjct: 58  TGKVYACGSNDYSQLGH--DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWG 115

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
           D  ++ G LG  +E       KV  Q+    +  I CG  H+ A+TS G+L+++G   +G
Sbjct: 116 D--NDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYG 173

Query: 434 ALG---HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            LG     D +  + P  + TL  +     +CG  H+  I +            S  +F 
Sbjct: 174 QLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK------------SGAVFG 221

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG    GQLG  D   R  P  +K    +    VACG   ++ LT  G VF+ G+  YGQ
Sbjct: 222 WGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG   S+ +   R+   +    I  +ACG+ H +A+V S+ +VY +G G++GQLG    +
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQLGTRSTK 341

Query: 610 NKQTPTLV 617
           +   P +V
Sbjct: 342 SLMLPQVV 349



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 159/338 (47%), Gaps = 31/338 (9%)

Query: 316 QIFSWGEGSGGKLGHGVEAD--VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           +++ WG  S G+LG G   D  +  P+ I     + +  VACG  HT  +T +G +Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ---ISSICCGPWHTAAITSAGKLFTFGDG 430
              +        S++ H +P K    +  LQ   I  I CG  H+ A++  G++ ++GD 
Sbjct: 66  SNDY--------SQLGHDLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 431 TFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
             G LGH  ++    +P+ V  L     V  +CG  H+ A+             S  +L+
Sbjct: 118 DCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALT------------SCGELY 165

Query: 490 TWGDGAEGQLG---HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           +WG    GQLG     D      PL +     I    +ACG + +  ++ +G VF  G  
Sbjct: 166 SWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225

Query: 547 DYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           + GQLG    T + +PT+++  ++   +  +ACG      ++++  V+T G GA GQLGH
Sbjct: 226 NCGQLGLNDETNRAYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
           G + N+  P +V  L    +  V CG+  T A+   +G
Sbjct: 285 GFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRG 322



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 136/282 (48%), Gaps = 21/282 (7%)

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           +LY WG   H    LG + +     PR++    +   +  + CG  HT  +T+ GK++  
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDT-AVQQVACGHRHTLFLTATGKVYAC 64

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           G   +  LGH     T  P+ +  L++   +  SCG  H+ A+ +              +
Sbjct: 65  GSNDYSQLGHD--LPTKRPQLIPELQDYVIIQISCGSRHSLALSDWG------------Q 110

Query: 488 LFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           + +WGD   GQLGH   +  V +P  V+     +  ++ACG++ ++ALT+ G+++S GS 
Sbjct: 111 VLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSN 170

Query: 547 DYGQLG--SPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
            YGQLG  SP       +P R+   +    +  IACG  H  ++S    V+ WG+   GQ
Sbjct: 171 IYGQLGVNSPNDLTHCNYPLRLT-TLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           LG  D  N+  PT ++ LR   V+ V CG  F+  +    GV
Sbjct: 230 LGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 271



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/162 (39%), Positives = 87/162 (53%), Gaps = 13/162 (8%)

Query: 484 SSKKLFTWGDGAEGQLGHGDAE------PRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
           S K+L+ WG  + GQLG G  E      PR +P     + D +  +VACGH  T+ LTAT
Sbjct: 3   SGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPW----TPDTAVQQVACGHRHTLFLTAT 58

Query: 538 GQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
           G+V++ GS DY QLG    T K P  I   ++   I  I+CGS H   +S   +V +WG 
Sbjct: 59  GKVYACGSNDYSQLGHDLPT-KRPQLIP-ELQDYVIIQISCGSRHSLALSDWGQVLSWGD 116

Query: 598 GANGQLGHG-DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
              GQLGH  + E  Q P +V  L  K V  + CG+N + A+
Sbjct: 117 NDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLAL 158



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 11/198 (5%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+++ WG  +  G LG  VN    S  D      P  L + + +   +IACG  H+ L++
Sbjct: 162 GELYSWGSNI-YGQLG--VN----SPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS 214

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K G +F WG  + G+LG   E + +YP  +  L    +  VACG+  +  +T  G ++T 
Sbjct: 215 KSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTC 274

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGT 431
           G G +  G LG     +  +PR V  ++ G  I+ + CG  HT A+  S GK++ FG G+
Sbjct: 275 GAGAY--GQLGHGFSSNEMLPRMVM-ELMGSTITQVACGNRHTLALVPSRGKVYAFGLGS 331

Query: 432 FGALGHGDRSSTSVPREV 449
            G LG     S  +P+ V
Sbjct: 332 SGQLGTRSTKSLMLPQVV 349



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 13/147 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG            N  ++   D  +   P  L++   L  + +ACG + +V +T
Sbjct: 217 GAVFGWGRN----------NCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLT 266

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS-GDLYT 371
            +G +F+ G G+ G+LGHG  ++   P+++  L GS I  VACG  HT A+  S G +Y 
Sbjct: 267 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYA 326

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSG 398
           +G G  + G LG  S  S  +P+ V G
Sbjct: 327 FGLG--SSGQLGTRSTKSLMLPQVVIG 351


>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 909

 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 175/359 (48%), Gaps = 35/359 (9%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE 
Sbjct: 37  KEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH--EREGNKPEQIGALADQHIIHVACGES 94

Query: 359 HTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  A
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCLA 151

Query: 418 ITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           + + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL-----S 206

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
            SG+       +F WG    GQLG  D + R  P  VK+        ++CG   T  LT 
Sbjct: 207 LSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK 259

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTW 595
           +G VF+ G+   GQLG      +   R    +    +  IACG  H +A+V S   +Y +
Sbjct: 260 SGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 596 GKGANGQLGHGDNENKQTPTLVEA---------------LRDKQVKSVVCGSNFTAAIC 639
           G GA GQLG G   N + P+ V+                 + + VK +  G + T  +C
Sbjct: 320 GCGAKGQLGTGHTCNVKCPSPVKGHWAAHSGQLSARADRFKYRVVKQIFSGGDQTFVLC 378



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 150/309 (48%), Gaps = 33/309 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACGEFH 359
           +ACG  H++ ++ +GQ+FSWG GS G+LG     D V+ P+LI  LN   I  V+CG +H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
             A+   G  +TWG   H  G LG   E  S   P++V   +EG+ ++ +  G  H+ A+
Sbjct: 149 CLALAADGQFFTWGKNSH--GQLGLGKEFPSQTSPQRVRS-LEGIPLAQVAAGGAHSFAL 205

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           + +G +F +G    G LG  D      P  V+ L+  K V  SCG  HTA + +  G   
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG--- 262

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT-AT 537
                    +FT+G G+ GQLGH      V P  V         ++ACG   T+AL  ++
Sbjct: 263 ---------VFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSS 313

Query: 538 GQVFSMGSADYGQLGSPGSTG-KFPTRIEGN--------------IKHRYIEDIACGSYH 582
           G +++ G    GQLG+  +   K P+ ++G+               K+R ++ I  G   
Sbjct: 314 GLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSGQLSARADRFKYRVVKQIFSGGDQ 373

Query: 583 IAVVSSKSE 591
             V+ S  E
Sbjct: 374 TFVLCSTYE 382



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 165/336 (49%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  +I  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -VNTKGQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A+    G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 129/251 (51%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG  ++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A+V            SS  ++ +
Sbjct: 271 CGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA+GQLG G
Sbjct: 320 GCGAKGQLGTG 330



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG---LGKEFPSQTS-----PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A+  S+G ++ FG G 
Sbjct: 267 GAG--SCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 35/165 (21%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGV 274
           G+  A   +  A SF +SLS                  G VF WG            N  
Sbjct: 189 GIPLAQVAAGGAHSFALSLS------------------GAVFGWGMN----------NAG 220

Query: 275 EISSADRRDALLP---KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG 331
           ++  +D +D   P   K+L +  V+    I+CG +H  ++TK G +F++G GS G+LGH 
Sbjct: 221 QLGLSDEKDRESPCHVKLLRTQKVV---YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 332 VEADVSYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDG 375
              D   P+ +  L GS +  +ACG  HT A V  SG +Y +G G
Sbjct: 278 SVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322


>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
           [Sarcophilus harrisii]
          Length = 638

 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 174/359 (48%), Gaps = 35/359 (9%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + +ACG  H++ + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE 
Sbjct: 38  KEVACGGNHSIFLLEDGEVYTCGSNTKGQLGH--EREGNKPEQIGALADQHIVHVACGES 95

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVS-EISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           H+ A++  G L++WG G  + G LG  + E S  IPR +  ++    I  + CG WH  A
Sbjct: 96  HSLALSDQGQLFSWGAG--SDGQLGHTTTEDSVAIPRLIK-KLNQQMILQVSCGNWHCMA 152

Query: 418 ITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           + + G+ FT+G    G LG G +  S + P+ V++L+ +     + G  H+ A+      
Sbjct: 153 LAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFAL-----S 207

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
            SG+       +F WG    GQLG  D   R  P  VK+        ++CG   T  LT 
Sbjct: 208 LSGA-------VFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTK 260

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTW 595
           +G VF+ G+  +GQLG      +   R    +    +  IACG  H +A V S   +Y +
Sbjct: 261 SGGVFTFGAGSFGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAF 320

Query: 596 GKGANGQLGHGDNENKQTPTLV---------------EALRDKQVKSVVCGSNFTAAIC 639
           G GA GQLG G   N + P+ V               ++ +   VK +  G + T  +C
Sbjct: 321 GCGARGQLGTGHTCNVKCPSPVKGHWAAHNGQLSSRADSFKYHIVKHIFSGGDQTFVLC 379



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 158/331 (47%), Gaps = 21/331 (6%)

Query: 320 WGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNL 379
           W  G  G +   ++  V+ P+    ++  +I  VACG  H+  +   G++YT G      
Sbjct: 7   WSLGHPGGISSNLQGIVTEPQAYGFISDRSIKEVACGGNHSIFLLEDGEVYTCGSNTK-- 64

Query: 380 GLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGD 439
           G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G LGH  
Sbjct: 65  GQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTT 121

Query: 440 -RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ 498
              S ++PR ++ L +   +  SCG WH  A+             +  + FTWG    GQ
Sbjct: 122 TEDSVAIPRLIKKLNQQMILQVSCGNWHCMALA------------ADGQFFTWGQNRHGQ 169

Query: 499 LGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGST 557
           LG G   P +  P  VK  + I   +VA G + + AL+ +G VF  G  + GQLG    T
Sbjct: 170 LGLGKEFPSQASPQRVKSLEGIPLAQVAAGGAHSFALSLSGAVFGWGRNNAGQLGLSDET 229

Query: 558 GK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTL 616
            +  P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++  P  
Sbjct: 230 DRQSPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSFGQLGHDSMNDEVNPRR 288

Query: 617 VEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
           V  L   +V  + CG   T A     G+  A
Sbjct: 289 VLELMGSEVTQIACGRQHTLAFVPSSGLIYA 319



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ ++S   +    +A G  H+  ++
Sbjct: 157 GQFFTWGQN-RHGQLG---LGKEFPSQAS-----PQRVKSLEGIPLAQVAAGGAHSFALS 207

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 208 LSGAVFGWGRNNAGQLGLSDETDRQSPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 267

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 268 GAG--SFGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 324

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 325 RGQLGTGHTCNVKCPSPVK 343


>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 1053

 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 160/325 (49%), Gaps = 22/325 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + + CG +H V + + G +++ G    G+LGH  E     P+ + +L+  NI  V+CGE
Sbjct: 36  VRDVGCGRRHTVFLLEDGTVYTCGCNDLGQLGH--EKARKKPEQVVSLDAQNIVAVSCGE 93

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            HT A+   G ++ WG G    LGL   + E    +PR V    E + I+ + CG WH+ 
Sbjct: 94  AHTLALNDKGQVFAWGLGSDGQLGL--SIVEDCLRVPRTVKSLSE-VHITQVACGYWHSL 150

Query: 417 AITSAGKLFTFGDGTFGALGHGDRSS-TSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+   G++F++G   +G LG G + +    P+ +++L+ +     S G  H         
Sbjct: 151 ALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAH--------- 201

Query: 476 KTSGSNGLS-SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
               S GL+ S  +F WG    GQLG GD + R  P+ +K         + CG   T AL
Sbjct: 202 ----SFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAAL 257

Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVY 593
           T  G VF+ G+  YGQLG   +  +   R    +    +  IACG  H +A + S  ++ 
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKID 317

Query: 594 TWGKGANGQLGHGDNENKQTPTLVE 618
           ++G G NGQLG     N+ +PT V+
Sbjct: 318 SFGLGGNGQLGTRSTCNRISPTPVK 342



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 153/327 (46%), Gaps = 23/327 (7%)

Query: 317 IFSWGEGSGGKLGHG-VEADVSY-PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G ++ +V   P+  +   G  +  V CG  HT  +   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E +   P +V   ++   I ++ CG  HT A+   G++F +G G+ G 
Sbjct: 60  -CNDLGQLGH--EKARKKPEQVVS-LDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQ 115

Query: 435 LGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG         VPR V++L E+     +CG WH+ A+                ++F+WG 
Sbjct: 116 LGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALAR------------GGEIFSWGQ 163

Query: 494 GAEGQLGHGDAEPRVV-PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G     V  P  ++    I F +++ G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
                  +FP  ++  ++ + +  I CG  H A ++ +  V+T+G G  GQLGH    ++
Sbjct: 224 LGDNDDRRFPVLLK-TLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAI 638
             P  V  L    V  + CG   T A 
Sbjct: 283 VNPRKVFELMGSVVSQIACGRQHTLAF 309



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 135/279 (48%), Gaps = 19/279 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PR+     EG ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEVLLEPRRCEF-FEGKRVRDVGCGRRHTVFLLEDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    +   P +V +L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKARKKPEQVVSLDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           F WG G++GQLG    E  + VP  VK   ++   +VACG+  ++AL   G++FS G   
Sbjct: 106 FAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNK 165

Query: 548 YGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           YGQLG    G+    P  I+ +++      I+ G  H   ++    ++ WG+   GQLG 
Sbjct: 166 YGQLGLGQQGACVCSPQVIQ-SLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           GDN++++ P L++ LR +QV  + CG + TAA+    GV
Sbjct: 225 GDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGV 263



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/264 (33%), Positives = 129/264 (48%), Gaps = 26/264 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDAL-LPKVLESTVVLDAQSIACGSKHAVLV 311
           G VF WG G  +G LG ++  VE       D L +P+ ++S   +    +ACG  H++ +
Sbjct: 103 GQVFAWGLG-SDGQLGLSI--VE-------DCLRVPRTVKSLSEVHITQVACGYWHSLAL 152

Query: 312 TKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
            + G+IFSWG+   G+LG G + A V  P++I +L G     ++ G  H+  +TLSG ++
Sbjct: 153 ARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIF 212

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            WG   +  G LG         P  +   +   Q+  ICCG  HTAA+T  G +FTFG G
Sbjct: 213 GWGR--NKFGQLGLGDNDDRRFPVLLK-TLRSQQVVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            +G LGH   +    PR+V  L        +CG  HT A +  +GK             +
Sbjct: 270 GYGQLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSGKID-----------S 318

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVK 514
           +G G  GQLG      R+ P  VK
Sbjct: 319 FGLGGNGQLGTRSTCNRISPTPVK 342


>gi|15223423|ref|NP_174026.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
 gi|124301018|gb|ABN04761.1| At1g27060 [Arabidopsis thaliana]
 gi|332192654|gb|AEE30775.1| regulator of chromosome condensation-like protein [Arabidopsis
           thaliana]
          Length = 386

 Score =  152 bits (384), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 130/410 (31%), Positives = 195/410 (47%), Gaps = 47/410 (11%)

Query: 240 SSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQ 299
           +  G    D +    V+ WG G  +G LG         +   +D LLP++L  T +    
Sbjct: 2   AEHGETQADEEEEEQVWSWGAGT-DGQLG---------TTKLQDELLPQLLSLTSLPSIS 51

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
            +ACG  H + +T  G++F+WG GS G+LGHG   +++ PKL+   + S I   A G  H
Sbjct: 52  MLACGGAHVIALTSGGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSH 111

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           +  V+ SG ++T G+G  + G LG    +S   P KVS       +  + CG  H+  + 
Sbjct: 112 SGFVSDSGCIFTCGNG--SFGQLGHGDTLSLSTPAKVS-HFNNDSVKMVACGMRHSLVLF 168

Query: 420 SAGKLFTFGDGTFGALGH-GDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +  ++  FG G  G LG   DR  S ++P  V  LK+++ V  S    H+AAI       
Sbjct: 169 AGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAIS------ 222

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
                 +  + F+WG G  G  G     P+ +P        +SF +VA G +  + LT  
Sbjct: 223 ------ADGQFFSWGRGFCG--GPDVHAPQSLP------SPLSFREVAVGWNHALLLTVD 268

Query: 538 GQVFSMGSA-----DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
           G+VF +GS      +  QL    S   F    +       +  IA G+ H A V+   EV
Sbjct: 269 GEVFKLGSTLNKQPEKQQLQIDSSEALFEKVPD--FDGVKVMQIAAGAEHSAAVTENGEV 326

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEA----LRDKQVKSVVCGSNFTAAI 638
            TWG G +GQLG G+  ++ +P LV      LR K++K V CGS FT A+
Sbjct: 327 KTWGWGEHGQLGLGNTNDQTSPELVSLGSIDLRTKEIK-VYCGSGFTYAV 375


>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
          Length = 913

 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 175/359 (48%), Gaps = 35/359 (9%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE 
Sbjct: 37  KEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH--EREGNKPEQIGALADQHIIHVACGES 94

Query: 359 HTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  A
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCLA 151

Query: 418 ITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           + + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL-----S 206

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
            SG+       +F WG    GQLG  D + R  P  VK+        ++CG   T  LT 
Sbjct: 207 LSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK 259

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTW 595
           +G VF+ G+   GQLG      +   R    +    +  IACG  H +A+V S   +Y +
Sbjct: 260 SGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 596 GKGANGQLGHGDNENKQTPTLVEA---------------LRDKQVKSVVCGSNFTAAIC 639
           G GA GQLG G   N + P+ V+                 + + VK +  G + T  +C
Sbjct: 320 GCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVLC 378



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 150/309 (48%), Gaps = 33/309 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACGEFH 359
           +ACG  H++ ++ +GQ+FSWG GS G+LG     D V+ P+LI  LN   I  V+CG +H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
             A+   G  +TWG   H  G LG   E  S   P++V   +EG+ ++ +  G  H+ A+
Sbjct: 149 CLALAADGQFFTWGKNSH--GQLGLGKEFPSQTSPQRVRS-LEGIPLAQVAAGGAHSFAL 205

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           + +G +F +G    G LG  D      P  V+ L+  K V  SCG  HTA + +  G   
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG--- 262

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT-AT 537
                    +FT+G G+ GQLGH      V P  V         ++ACG   T+AL  ++
Sbjct: 263 ---------VFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSS 313

Query: 538 GQVFSMGSADYGQLGSPGSTG-KFPTRIEGN--------------IKHRYIEDIACGSYH 582
           G +++ G    GQLG+  +   K P+ ++G+               K+R ++ I  G   
Sbjct: 314 GLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQ 373

Query: 583 IAVVSSKSE 591
             V+ S  E
Sbjct: 374 TFVLCSTYE 382



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 165/336 (49%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  +I  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -VNTKGQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A+    G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 129/251 (51%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG  ++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A+V            SS  ++ +
Sbjct: 271 CGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA+GQLG G
Sbjct: 320 GCGAKGQLGTG 330



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG---LGKEFPSQTS-----PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A+  S+G ++ FG G 
Sbjct: 267 GAG--SCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 35/165 (21%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGV 274
           G+  A   +  A SF +SLS                  G VF WG            N  
Sbjct: 189 GIPLAQVAAGGAHSFALSLS------------------GAVFGWGMN----------NAG 220

Query: 275 EISSADRRDALLP---KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG 331
           ++  +D +D   P   K+L +  V+    I+CG +H  ++TK G +F++G GS G+LGH 
Sbjct: 221 QLGLSDEKDRESPCHVKLLRTQKVV---YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 332 VEADVSYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDG 375
              D   P+ +  L GS +  +ACG  HT A V  SG +Y +G G
Sbjct: 278 SVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322


>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
 gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
 gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 1050

 Score =  152 bits (383), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 175/359 (48%), Gaps = 35/359 (9%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE 
Sbjct: 37  KEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH--EREGNKPEQIGALADQHIIHVACGES 94

Query: 359 HTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  A
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCLA 151

Query: 418 ITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           + + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL-----S 206

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
            SG+       +F WG    GQLG  D + R  P  VK+        ++CG   T  LT 
Sbjct: 207 LSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK 259

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTW 595
           +G VF+ G+   GQLG      +   R    +    +  IACG  H +A+V S   +Y +
Sbjct: 260 SGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 596 GKGANGQLGHGDNENKQTPTLVEA---------------LRDKQVKSVVCGSNFTAAIC 639
           G GA GQLG G   N + P+ V+                 + + VK +  G + T  +C
Sbjct: 320 GCGAKGQLGTGHTCNVKCPSPVKGHWAAHSGQLSARADRFKYRVVKQIFSGGDQTFVLC 378



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 150/309 (48%), Gaps = 33/309 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACGEFH 359
           +ACG  H++ ++ +GQ+FSWG GS G+LG     D V+ P+LI  LN   I  V+CG +H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
             A+   G  +TWG   H  G LG   E  S   P++V   +EG+ ++ +  G  H+ A+
Sbjct: 149 CLALAADGQFFTWGKNSH--GQLGLGKEFPSQTSPQRVRS-LEGIPLAQVAAGGAHSFAL 205

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           + +G +F +G    G LG  D      P  V+ L+  K V  SCG  HTA + +  G   
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG--- 262

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT-AT 537
                    +FT+G G+ GQLGH      V P  V         ++ACG   T+AL  ++
Sbjct: 263 ---------VFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSS 313

Query: 538 GQVFSMGSADYGQLGSPGSTG-KFPTRIEGN--------------IKHRYIEDIACGSYH 582
           G +++ G    GQLG+  +   K P+ ++G+               K+R ++ I  G   
Sbjct: 314 GLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSGQLSARADRFKYRVVKQIFSGGDQ 373

Query: 583 IAVVSSKSE 591
             V+ S  E
Sbjct: 374 TFVLCSTYE 382



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 165/336 (49%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  +I  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -VNTKGQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A+    G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 129/251 (51%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG  ++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A+V            SS  ++ +
Sbjct: 271 CGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA+GQLG G
Sbjct: 320 GCGAKGQLGTG 330



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG---LGKEFPSQTS-----PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A+  S+G ++ FG G 
Sbjct: 267 GAG--SCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342


>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cricetulus griseus]
          Length = 631

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 181/382 (47%), Gaps = 35/382 (9%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           ISS  R     P+V         + +ACG  H+V + + G++++ G  S G+LGH  E +
Sbjct: 14  ISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGVNSKGQLGH--ERE 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPR 394
            + P+ I AL   +I  VACGE H+ A++  G L++WG G    LGL+   +E S  +PR
Sbjct: 72  GNKPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPR 129

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
            +  ++    I  + CG WH  A+ + G+ FT+G  + G LG G +  S + P+ V +L+
Sbjct: 130 LIQ-KLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLE 188

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +     + G  H+ A+       SG+       +F WG    GQLG  D + R  P  V
Sbjct: 189 GIPLAQVAAGGAHSFAL-----SLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHV 236

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           K+        ++CG   T  LT +G VF+ G+   GQLG      +   R    +    +
Sbjct: 237 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEV 296

Query: 574 EDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA------------- 619
             IACG  H +A V S   +Y +G GA GQLG G   N + P+ V+              
Sbjct: 297 TQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARA 356

Query: 620 --LRDKQVKSVVCGSNFTAAIC 639
              + + VK +  G + T  +C
Sbjct: 357 DRFKYRVVKQIFSGGDQTFVLC 378



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 149/309 (48%), Gaps = 33/309 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACGEFH 359
           +ACG  H++ ++ +GQ+FSWG GS G+LG     D V+ P+LI  LN   I  V+CG +H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
             A+   G  +TWG   H  G LG   E  S   P++V   +EG+ ++ +  G  H+ A+
Sbjct: 149 CLALAADGQFFTWGKNSH--GQLGLGKEFPSQTSPQRVR-SLEGIPLAQVAAGGAHSFAL 205

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           + +G +F +G    G LG  D      P  V+ L+  K V  SCG  HTA + +  G   
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG--- 262

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT-AT 537
                    +FT+G G+ GQLGHG     V P  V         ++ACG   T+A   ++
Sbjct: 263 ---------VFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSS 313

Query: 538 GQVFSMGSADYGQLGSPGSTG-KFPTRIEG--------------NIKHRYIEDIACGSYH 582
           G +++ G    GQLG+  +   K P+ ++G                K+R ++ I  G   
Sbjct: 314 GLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFKYRVVKQIFSGGDQ 373

Query: 583 IAVVSSKSE 591
             V+ S  E
Sbjct: 374 TFVLCSTYE 382



 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 165/336 (49%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    +   V+ P++   ++  +I  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISSNLRGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            +++ G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -VNSKGQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGHG   ++
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/251 (34%), Positives = 128/251 (50%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG  ++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGHG  +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 CGQLGHGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA GQLG G
Sbjct: 320 GCGARGQLGTG 330



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 77/165 (46%), Gaps = 35/165 (21%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGV 274
           G+  A   +  A SF +SLS                  G VF WG            N  
Sbjct: 189 GIPLAQVAAGGAHSFALSLS------------------GAVFGWGMN----------NAG 220

Query: 275 EISSADRRDALLP---KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG 331
           ++  +D +D   P   K+L +  V+    I+CG +H  ++TK G +F++G GS G+LGHG
Sbjct: 221 QLGLSDEKDRESPCHVKLLRTQKVV---YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHG 277

Query: 332 VEADVSYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDG 375
              D   P+ +  L GS +  +ACG  HT A V  SG +Y +G G
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322


>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
          Length = 1050

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 164/324 (50%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIVHVACGE 93

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+ + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+     
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             SG+       +F WG    GQLG  D E R  P  VK+        ++CG   T  LT
Sbjct: 206 SLSGA-------VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
            +G VF+ G+   GQLG      +   R    +    +  IACG  H +A V S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G GA GQLG G   N + P+ V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  ++  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -LNTKGQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 127/251 (50%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           W  G++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 W--GMNNAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA GQLG G
Sbjct: 320 GCGARGQLGTG 330



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG---LGKEFPSQAS-----PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 267 GAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 76/163 (46%), Gaps = 31/163 (19%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGN-GLLGGAVNG 273
           G+  A   +  A SF +SLS AV                    +G G+ N G LG +   
Sbjct: 189 GIPLAQVAAGGAHSFALSLSGAV--------------------FGWGMNNAGQLGLS--- 225

Query: 274 VEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
                 DR      K+L +  V+    I+CG +H  ++TK G +F++G GS G+LGH   
Sbjct: 226 ---DEEDRESPCHVKLLRTQKVV---YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDG 375
            D   P+ +  L GS +  +ACG  HT A V  SG +Y +G G
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322


>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 447

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 167/324 (51%), Gaps = 32/324 (9%)

Query: 329 GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNL---GLLGQV 385
           GHG   D   PK ++AL    +  V+ G +H+   T  G L ++G G  N+   G LG  
Sbjct: 90  GHGDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHG 149

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
            + +  IPR V   + G++I  +  G  H+  ++  G +F+FG G  G+LGHGD++   V
Sbjct: 150 DQRTQMIPRPVL-SLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLV 208

Query: 446 PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE 505
           P+ + +L+  K V  + G  H+  + E            S  ++++G G+EG LGHGD +
Sbjct: 209 PKLISSLQREKVVDIAAGSAHSLVVAE------------SGDVYSFGLGSEGALGHGDTD 256

Query: 506 PRVVPLCVKVSDDISFCKVACG--HSITIA----LTATGQVFSMGSADYGQLGSPGSTGK 559
             +VP  ++        KVA G  HS+ ++    L   G+V S G   YGQLG     G 
Sbjct: 257 MSLVPKKIEHFVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLG----LGH 312

Query: 560 FPTRIEGNIKHRYIE----DIACGSYHIAVVSSKSEVYTWGKGANGQLGHG-DNENKQTP 614
           F +R+  +     +E    +I  G++H  V+++   VY++G   +GQLGHG D  +   P
Sbjct: 313 F-SRMIASPAQVQVEAAAVEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEP 371

Query: 615 TLVEALRDKQVKSVVCGSNFTAAI 638
           TL+++L  +++  V  G+NF+  +
Sbjct: 372 TLIQSLERERIVDVAAGNNFSLVL 395



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 180/348 (51%), Gaps = 18/348 (5%)

Query: 279 ADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSG-----GKLGHGVE 333
            D  D L PK +E+      + ++ G  H+++ TK G + S+G GS      G+LGHG +
Sbjct: 92  GDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQ 151

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
                P+ + +L+G  I  VA G  H+  ++  G+++++G GI   G LG   +    +P
Sbjct: 152 RTQMIPRPVLSLSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGID--GSLGHGDQARQLVP 209

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           + +S  ++  ++  I  G  H+  +  +G +++FG G+ GALGHGD   + VP+++E   
Sbjct: 210 KLIS-SLQREKVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIEHFV 268

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
           +   V  + G  H+  + ++             ++ ++G  + GQLG G    R++    
Sbjct: 269 QRPAVKVAAGGSHSLVLSKLYVLEQ------EGRVLSFGQNSYGQLGLGHFS-RMIASPA 321

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGST--GKFPTRIEGNIKHR 571
           +V  + +  ++  G   ++ LT  G+V+S G A +GQLG          PT I+ +++  
Sbjct: 322 QVQVEAAAVEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQ-SLERE 380

Query: 572 YIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
            I D+A G+    V+S++  V+++G G NG+LG GD  N   PT+V A
Sbjct: 381 RIVDVAAGNNFSLVLSAEGTVFSFGCGKNGRLGKGDESNATQPTVVFA 428



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 146/308 (47%), Gaps = 30/308 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +  +G G  N ++ G      +   D+R  ++P+ + S   +    +A G+ H+++++
Sbjct: 128 GGLLSFGYGSANVVVDG-----RLGHGDQRTQMIPRPVLSLSGVRIVKVAAGAHHSLVLS 182

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            QG +FS+G G  G LGHG +A    PKLI +L    +  +A G  H+  V  SGD+Y++
Sbjct: 183 DQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQREKVVDIAAGSAHSLVVAESGDVYSF 242

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT------SAGKLFT 426
           G G  + G LG        +P+K+   ++   +  +  G  H+  ++        G++ +
Sbjct: 243 GLG--SEGALGHGDTDMSLVPKKIEHFVQRPAV-KVAAGGSHSLVLSKLYVLEQEGRVLS 299

Query: 427 FGDGTFGALGHGDRSST-SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
           FG  ++G LG G  S   + P +V+   E   V    G  H+  +             + 
Sbjct: 300 FGQNSYGQLGLGHFSRMIASPAQVQV--EAAAVEIEAGAHHSLVLT------------ND 345

Query: 486 KKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            +++++G    GQLGHG D      P  ++  +      VA G++ ++ L+A G VFS G
Sbjct: 346 GRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERERIVDVAAGNNFSLVLSAEGTVFSFG 405

Query: 545 SADYGQLG 552
               G+LG
Sbjct: 406 CGKNGRLG 413



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 19/223 (8%)

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           AG + +FG       GHGD      P+ VE L   +    S G++H+     VA K  G 
Sbjct: 77  AGNVVSFG--LADPSGHGDHVDKLRPKCVEALARERVRDVSAGLYHSL----VATKDGG- 129

Query: 481 NGLSSKKLFTWGDGA-----EGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
                  L ++G G+     +G+LGHGD   +++P  V     +   KVA G   ++ L+
Sbjct: 130 -------LLSFGYGSANVVVDGRLGHGDQRTQMIPRPVLSLSGVRIVKVAAGAHHSLVLS 182

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
             G VFS G    G LG      +   ++  +++   + DIA GS H  VV+   +VY++
Sbjct: 183 DQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQREKVVDIAAGSAHSLVVAESGDVYSF 242

Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G G+ G LGHGD +    P  +E    +    V  G + +  +
Sbjct: 243 GLGSEGALGHGDTDMSLVPKKIEHFVQRPAVKVAAGGSHSLVL 285


>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Meleagris gallopavo]
          Length = 1048

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 154/325 (47%), Gaps = 24/325 (7%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + + CG +H V V   G +++ G    G+LGH  E     P+ + AL+  NI  V+CGE 
Sbjct: 37  RDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKARKRPEHVGALDAQNIVAVSCGEA 94

Query: 359 HTCAVTLSGDLYTWG---DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
           HT A+   G +Y WG   DG   LGL G    I   +PR +    E +QI  + CG +H+
Sbjct: 95  HTLALNDKGQVYAWGLATDG--QLGLPGTEECIR--VPRNIKSLSE-IQIVQVACGYYHS 149

Query: 416 AAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            A++   ++F++G   +G LG G +    + P  +++L  +     + G  H+  +    
Sbjct: 150 LALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLT--- 206

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                     S  +F WG    GQLG  D   R VP  +K         + CG   T AL
Sbjct: 207 ---------LSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAAL 257

Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHI-AVVSSKSEVY 593
           T  G VF+ G+  YGQLG   ++ +   R    +    +  I CG  H  A V S   +Y
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIY 317

Query: 594 TWGKGANGQLGHGDNENKQTPTLVE 618
           ++G G NGQLG G   N+++P  V+
Sbjct: 318 SFGLGGNGQLGTGTTSNRKSPFTVK 342



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 156/327 (47%), Gaps = 21/327 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      I  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E +   P  V G ++   I ++ CG  HT A+   G+++ +G  T G 
Sbjct: 60  -CNDLGQLGH--EKARKRPEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L E++ V  +CG +H+ A+      + GS      ++F+WG 
Sbjct: 116 LGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLAL------SKGS------EVFSWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G + + +  P  +K    I F ++A G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + +  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAIC 639
            P  V  L    V  + CG   T A  
Sbjct: 284 NPRKVFELMGSLVTQITCGRQHTTAFV 310



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 116/230 (50%), Gaps = 15/230 (6%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDA 344
           +P+ ++S   +    +ACG  H++ ++K  ++FSWG+   G+LG G E    + P +I +
Sbjct: 127 VPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKS 186

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           L G     +A G  H+  +TLSG ++ WG   +  G LG   +   ++P  +   +   +
Sbjct: 187 LLGIPFAQIAAGGAHSFVLTLSGAIFGWGR--NKFGQLGLNDDNDRYVPTLLKS-LRTQK 243

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +  ICCG  HTAA+T  G +FTFG G +G LGH   S    PR+V  L        +CG 
Sbjct: 244 VVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGR 303

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
            HT A V            SS +++++G G  GQLG G    R  P  VK
Sbjct: 304 QHTTAFVP-----------SSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 128/276 (46%), Gaps = 19/276 (6%)

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG+       LG + E     PRK S      +I  + CG  HT  +   G ++T G   
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRK-SDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCND 62

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH    +   P  V  L     V  SCG  HT A+ +              +++ W
Sbjct: 63  LGQLGH--EKARKRPEHVGALDAQNIVAVSCGEAHTLALND------------KGQVYAW 108

Query: 492 GDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G   +GQLG  G  E   VP  +K   +I   +VACG+  ++AL+   +VFS G   YGQ
Sbjct: 109 GLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQ 168

Query: 551 LGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           LG      K   P  I+  +   + + IA G  H  V++    ++ WG+   GQLG  D+
Sbjct: 169 LGLGYEYKKQNSPHVIKSLLGIPFAQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDD 227

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            ++  PTL+++LR ++V  + CG + TAA+    GV
Sbjct: 228 NDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGV 263



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 9/160 (5%)

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSD---DISFCKVACGHSITIALTATGQVFSMG 544
           +  WG+ + GQLG G  +  +V L  + SD   +     V CG   T+ +   G V++ G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIV-LEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
             D GQLG   +  K P  + G +  + I  ++CG  H   ++ K +VY WG   +GQLG
Sbjct: 60  CNDLGQLGHEKAR-KRPEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLG 117

Query: 605 -HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
             G  E  + P  +++L + Q+  V CG  +  ++ L KG
Sbjct: 118 LPGTEECIRVPRNIKSLSEIQIVQVACG--YYHSLALSKG 155


>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 175/359 (48%), Gaps = 35/359 (9%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE 
Sbjct: 37  KEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH--EREGNKPEQIGALADQHIIHVACGES 94

Query: 359 HTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  A
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCLA 151

Query: 418 ITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           + + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL-----S 206

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
            SG+       +F WG    GQLG  D + R  P  VK+        ++CG   T  LT 
Sbjct: 207 LSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK 259

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTW 595
           +G VF+ G+   GQLG      +   R    +    +  IACG  H +A+V S   +Y +
Sbjct: 260 SGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 596 GKGANGQLGHGDNENKQTPTLVEA---------------LRDKQVKSVVCGSNFTAAIC 639
           G GA GQLG G   N + P+ V+                 + + VK +  G + T  +C
Sbjct: 320 GCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVLC 378



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 150/309 (48%), Gaps = 33/309 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACGEFH 359
           +ACG  H++ ++ +GQ+FSWG GS G+LG     D V+ P+LI  LN   I  V+CG +H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
             A+   G  +TWG   H  G LG   E  S   P++V   +EG+ ++ +  G  H+ A+
Sbjct: 149 CLALAADGQFFTWGKNSH--GQLGLGKEFPSQTSPQRVRS-LEGIPLAQVAAGGAHSFAL 205

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           + +G +F +G    G LG  D      P  V+ L+  K V  SCG  HTA + +  G   
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG--- 262

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT-AT 537
                    +FT+G G+ GQLGH      V P  V         ++ACG   T+AL  ++
Sbjct: 263 ---------VFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSS 313

Query: 538 GQVFSMGSADYGQLGSPGSTG-KFPTRIEGN--------------IKHRYIEDIACGSYH 582
           G +++ G    GQLG+  +   K P+ ++G+               K+R ++ I  G   
Sbjct: 314 GLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQ 373

Query: 583 IAVVSSKSE 591
             V+ S  E
Sbjct: 374 TFVLCSTYE 382



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 165/336 (49%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  +I  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -VNTKGQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A+    G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 129/251 (51%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG  ++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A+V            SS  ++ +
Sbjct: 271 CGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA+GQLG G
Sbjct: 320 GCGAKGQLGTG 330



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG---LGKEFPSQTS-----PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A+  S+G ++ FG G 
Sbjct: 267 GAG--SCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342


>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
          Length = 913

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 175/359 (48%), Gaps = 35/359 (9%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE 
Sbjct: 37  KEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH--EREGNKPEQIGALADQHIIHVACGES 94

Query: 359 HTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  A
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCLA 151

Query: 418 ITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           + + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL-----S 206

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
            SG+       +F WG    GQLG  D + R  P  VK+        ++CG   T  LT 
Sbjct: 207 LSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK 259

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTW 595
           +G VF+ G+   GQLG      +   R    +    +  IACG  H +A+V S   +Y +
Sbjct: 260 SGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 596 GKGANGQLGHGDNENKQTPTLVEA---------------LRDKQVKSVVCGSNFTAAIC 639
           G GA GQLG G   N + P+ V+                 + + VK +  G + T  +C
Sbjct: 320 GCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVLC 378



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 150/309 (48%), Gaps = 33/309 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACGEFH 359
           +ACG  H++ ++ +GQ+FSWG GS G+LG     D V+ P+LI  LN   I  V+CG +H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
             A+   G  +TWG   H  G LG   E  S   P++V   +EG+ ++ +  G  H+ A+
Sbjct: 149 CLALAADGQFFTWGKNSH--GQLGLGKEFPSQTSPQRVRS-LEGIPLAQVAAGGAHSFAL 205

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           + +G +F +G    G LG  D      P  V+ L+  K V  SCG  HTA + +  G   
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG--- 262

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT-AT 537
                    +FT+G G+ GQLGH      V P  V         ++ACG   T+AL  ++
Sbjct: 263 ---------VFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSS 313

Query: 538 GQVFSMGSADYGQLGSPGSTG-KFPTRIEGN--------------IKHRYIEDIACGSYH 582
           G +++ G    GQLG+  +   K P+ ++G+               K+R ++ I  G   
Sbjct: 314 GLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQ 373

Query: 583 IAVVSSKSE 591
             V+ S  E
Sbjct: 374 TFVLCSTYE 382



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 165/336 (49%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  +I  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -VNTKGQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A+    G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 129/251 (51%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG  ++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A+V            SS  ++ +
Sbjct: 271 CGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA+GQLG G
Sbjct: 320 GCGAKGQLGTG 330



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG---LGKEFPSQTS-----PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A+  S+G ++ FG G 
Sbjct: 267 GAG--SCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 35/165 (21%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGV 274
           G+  A   +  A SF +SLS                  G VF WG            N  
Sbjct: 189 GIPLAQVAAGGAHSFALSLS------------------GAVFGWGMN----------NAG 220

Query: 275 EISSADRRDALLP---KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG 331
           ++  +D +D   P   K+L +  V+    I+CG +H  ++TK G +F++G GS G+LGH 
Sbjct: 221 QLGLSDEKDRESPCHVKLLRTQKVV---YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 332 VEADVSYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDG 375
              D   P+ +  L GS +  +ACG  HT A V  SG +Y +G G
Sbjct: 278 SVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCG 322


>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
           caballus]
          Length = 1050

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 163/324 (50%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIVHVACGE 93

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            H  A++  G L++WG G    LGL+     ++  +PR +  ++    I  + CG WH+ 
Sbjct: 94  SHNLALSDRGQLFSWGAGSDGQLGLMTTEDAVA--VPRVIQ-KLNQQTILQVSCGNWHSL 150

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+ + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+     
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             SG+       +F WG    GQLG  D E R  P  VK+        ++CG   T  LT
Sbjct: 206 SLSGA-------VFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
            +G VF+ G+   GQLG      +   R    +    +  IACG  H +A V S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G GA GQLG G   N + P+ V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 164/336 (48%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  ++  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H  A++  G+LF++G G+ G 
Sbjct: 60  -LNTKGQLGHEREGNK--PEQI-GALADQHIVHVACGESHNLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      + +VPR ++ L +   +  SCG WH+ A+             +  + FTWG 
Sbjct: 116 LGLMTTEDAVAVPRVIQKLNQQTILQVSCGNWHSLALA------------ADGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 124/252 (49%), Gaps = 26/252 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDAL-LPKVLESTVVLDAQSIACGSKHAVLV 311
           G +F WG G  +G LG              DA+ +P+V++         ++CG+ H++ +
Sbjct: 103 GQLFSWGAG-SDGQLGLMTT---------EDAVAVPRVIQKLNQQTILQVSCGNWHSLAL 152

Query: 312 TKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
              GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++
Sbjct: 153 AADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVF 212

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            W  G++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G
Sbjct: 213 GW--GMNNAGQLGLSDEEDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAG 269

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
           + G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ 
Sbjct: 270 SCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYA 318

Query: 491 WGDGAEGQLGHG 502
           +G GA GQLG G
Sbjct: 319 FGCGARGQLGTG 330



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG---LGKEFPSQAS-----PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 267 GAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 76/163 (46%), Gaps = 31/163 (19%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGN-GLLGGAVNG 273
           G+  A   +  A SF +SLS AV                    +G G+ N G LG +   
Sbjct: 189 GIPLAQVAAGGAHSFALSLSGAV--------------------FGWGMNNAGQLGLS--- 225

Query: 274 VEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
                 DR      K+L +  V+    I+CG +H  ++TK G +F++G GS G+LGH   
Sbjct: 226 ---DEEDRESPCHVKLLRTQKVV---YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDG 375
            D   P+ +  L GS +  +ACG  HT A V  SG +Y +G G
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322


>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
 gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
 gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
 gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
          Length = 1050

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/359 (30%), Positives = 175/359 (48%), Gaps = 35/359 (9%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE 
Sbjct: 37  KEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH--EREGNKPEQIGALADQHIIHVACGES 94

Query: 359 HTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  A
Sbjct: 95  HSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCLA 151

Query: 418 ITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           + + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+      
Sbjct: 152 LAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL-----S 206

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
            SG+       +F WG    GQLG  D + R  P  VK+        ++CG   T  LT 
Sbjct: 207 LSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTK 259

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTW 595
           +G VF+ G+   GQLG      +   R    +    +  IACG  H +A+V S   +Y +
Sbjct: 260 SGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAF 319

Query: 596 GKGANGQLGHGDNENKQTPTLVEA---------------LRDKQVKSVVCGSNFTAAIC 639
           G GA GQLG G   N + P+ V+                 + + VK +  G + T  +C
Sbjct: 320 GCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQTFVLC 378



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 150/309 (48%), Gaps = 33/309 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACGEFH 359
           +ACG  H++ ++ +GQ+FSWG GS G+LG     D V+ P+LI  LN   I  V+CG +H
Sbjct: 89  VACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWH 148

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
             A+   G  +TWG   H  G LG   E  S   P++V   +EG+ ++ +  G  H+ A+
Sbjct: 149 CLALAADGQFFTWGKNSH--GQLGLGKEFPSQTSPQRVRS-LEGIPLAQVAAGGAHSFAL 205

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           + +G +F +G    G LG  D      P  V+ L+  K V  SCG  HTA + +  G   
Sbjct: 206 SLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGG--- 262

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT-AT 537
                    +FT+G G+ GQLGH      V P  V         ++ACG   T+AL  ++
Sbjct: 263 ---------VFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSS 313

Query: 538 GQVFSMGSADYGQLGSPGSTG-KFPTRIEGN--------------IKHRYIEDIACGSYH 582
           G +++ G    GQLG+  +   K P+ ++G+               K+R ++ I  G   
Sbjct: 314 GLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFKYRVVKQIFSGGDQ 373

Query: 583 IAVVSSKSE 591
             V+ S  E
Sbjct: 374 TFVLCSTYE 382



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 165/336 (49%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  +I  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -VNTKGQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A+    G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYA 318



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 129/251 (51%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG  ++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A+V            SS  ++ +
Sbjct: 271 CGQLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA+GQLG G
Sbjct: 320 GCGAKGQLGTG 330



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG---LGKEFPSQTS-----PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A+  S+G ++ FG G 
Sbjct: 267 GAG--SCGQLGHDSVNDEVNPRRVL-ELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 KGQLGTGHTCNVKCPSPVK 342


>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
          Length = 456

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 160/332 (48%), Gaps = 34/332 (10%)

Query: 317 IFSWGEGSGGKLGH-GVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           +++WG     +LG  G   D   P+LI       I  VACG  HT  +   G L+++G  
Sbjct: 12  LYTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHSFG-- 69

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGL--QISSICCGPWHTAAITSAGKLFTFGDGTFG 433
            +  G LG  +++    P   S  +  L  ++ ++ CG +H+AA+   G +FT+G G  G
Sbjct: 70  YNQYGQLGNGTKVDS--PLDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNG 127

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
            LGH D  + ++P  +  L     +   CG   TAAI +               L+TWG 
Sbjct: 128 RLGHNDEQTRTIPCRITHLPRAHKIF--CGYHITAAITD-------------DGLYTWGW 172

Query: 494 GAEGQLGHGDAEPRVVPLCVKVSD-DISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
           G  GQLG G  E    P  V   D +++  ++ACG    +  T +G V++ GS ++GQLG
Sbjct: 173 GEHGQLGQGSLEDSYGPKKVIFDDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLG 232

Query: 553 SPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
                G++      P  +  ++    +  +A G  H A V++   ++TWG GA GQ GHG
Sbjct: 233 ----IGRYNEIYSSPVLLT-SLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHG 287

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           D  +   P LVE+L    +  V CG NFT A+
Sbjct: 288 DYNDCDMPFLVESLVGVFILKVFCGHNFTVAL 319



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/298 (33%), Positives = 141/298 (47%), Gaps = 29/298 (9%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           ++ACG  H+  +   G +F+WG G  G+LGH  E   + P  I  L     H + CG   
Sbjct: 101 AVACGRYHSAALDVNGTVFTWGGGKNGRLGHNDEQTRTIPCRITHL--PRAHKIFCGYHI 158

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           T A+T  G LYTWG G H  G LGQ S    + P+KV      L IS + CG  H    T
Sbjct: 159 TAAITDDG-LYTWGWGEH--GQLGQGSLEDSYGPKKVIFDDANLAISQLACGDRHCLVRT 215

Query: 420 SAGKLFTFGDGTFGALGHGDRSST-SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
            +G ++T+G   FG LG G  +   S P  + +L  +     + G  H+AA+        
Sbjct: 216 ESGDVYTWGSNEFGQLGIGRYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVT------- 268

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
                ++  LFTWG GAEGQ GHGD     +P  V+    +   KV CGH+ T+AL+   
Sbjct: 269 -----NTGSLFTWGCGAEGQCGHGDYNDCDMPFLVESLVGVFILKVFCGHNFTVALSKDN 323

Query: 539 QVFSMGSADYGQLGSPGSTG-----KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            ++  G+  YGQLG    +      K    I G I      DI CG +H  + ++  E
Sbjct: 324 DIYVFGNNSYGQLGDGSKSSCCTPRKLFFSIPGTI------DITCGHFHCTLWTTLEE 375



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 5/180 (2%)

Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDALN 346
           KV+     L    +ACG +H ++ T+ G +++WG    G+LG G   ++ S P L+ +L 
Sbjct: 191 KVIFDDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLGIGRYNEIYSSPVLLTSLA 250

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
           G  +  VA G+ H+ AVT +G L+TWG G       G  ++    +P  V   + G+ I 
Sbjct: 251 GMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDCD--MPFLVE-SLVGVFIL 307

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            + CG   T A++    ++ FG+ ++G LG G +SS   PR++       T+  +CG +H
Sbjct: 308 KVFCGHNFTVALSKDNDIYVFGNNSYGQLGDGSKSSCCTPRKL-FFSIPGTIDITCGHFH 366



 Score = 75.9 bits (185), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 82/168 (48%), Gaps = 13/168 (7%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           GDV+ WG      L  G  N  EI S+       P +L S   +    +A G +H+  VT
Sbjct: 218 GDVYTWGSNEFGQLGIGRYN--EIYSS-------PVLLTSLAGMMVTFVAAGDRHSAAVT 268

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F+WG G+ G+ GHG   D   P L+++L G  I  V CG   T A++   D+Y +
Sbjct: 269 NTGSLFTWGCGAEGQCGHGDYNDCDMPFLVESLVGVFILKVFCGHNFTVALSKDNDIYVF 328

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           G+  ++ G LG  S+ S   PRK+   + G     I CG +H    T+
Sbjct: 329 GN--NSYGQLGDGSKSSCCTPRKLFFSIPG--TIDITCGHFHCTLWTT 372


>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Meleagris gallopavo]
          Length = 1056

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 154/325 (47%), Gaps = 24/325 (7%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + + CG +H V V   G +++ G    G+LGH  E     P+ + AL+  NI  V+CGE 
Sbjct: 37  RDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKARKRPEHVGALDAQNIVAVSCGEA 94

Query: 359 HTCAVTLSGDLYTWG---DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
           HT A+   G +Y WG   DG   LGL G    I   +PR +    E +QI  + CG +H+
Sbjct: 95  HTLALNDKGQVYAWGLATDG--QLGLPGTEECIR--VPRNIKSLSE-IQIVQVACGYYHS 149

Query: 416 AAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            A++   ++F++G   +G LG G +    + P  +++L  +     + G  H+  +    
Sbjct: 150 LALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLT--- 206

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                     S  +F WG    GQLG  D   R VP  +K         + CG   T AL
Sbjct: 207 ---------LSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAAL 257

Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHI-AVVSSKSEVY 593
           T  G VF+ G+  YGQLG   ++ +   R    +    +  I CG  H  A V S   +Y
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIY 317

Query: 594 TWGKGANGQLGHGDNENKQTPTLVE 618
           ++G G NGQLG G   N+++P  V+
Sbjct: 318 SFGLGGNGQLGTGTTSNRKSPFTVK 342



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 156/327 (47%), Gaps = 21/327 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      I  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E +   P  V G ++   I ++ CG  HT A+   G+++ +G  T G 
Sbjct: 60  -CNDLGQLGH--EKARKRPEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L E++ V  +CG +H+ A+      + GS      ++F+WG 
Sbjct: 116 LGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLAL------SKGS------EVFSWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G + + +  P  +K    I F ++A G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + +  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAIC 639
            P  V  L    V  + CG   T A  
Sbjct: 284 NPRKVFELMGSLVTQITCGRQHTTAFV 310



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 116/230 (50%), Gaps = 15/230 (6%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDA 344
           +P+ ++S   +    +ACG  H++ ++K  ++FSWG+   G+LG G E    + P +I +
Sbjct: 127 VPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKS 186

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           L G     +A G  H+  +TLSG ++ WG   +  G LG   +   ++P  +   +   +
Sbjct: 187 LLGIPFAQIAAGGAHSFVLTLSGAIFGWGR--NKFGQLGLNDDNDRYVPTLLKS-LRTQK 243

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +  ICCG  HTAA+T  G +FTFG G +G LGH   S    PR+V  L        +CG 
Sbjct: 244 VVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGR 303

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
            HT A V            SS +++++G G  GQLG G    R  P  VK
Sbjct: 304 QHTTAFVP-----------SSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 130/277 (46%), Gaps = 21/277 (7%)

Query: 372 WGDG-IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           WG+     LGL G   EI    PRK S      +I  + CG  HT  +   G ++T G  
Sbjct: 4   WGNASFGQLGLGGIDEEIV-LEPRK-SDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCN 61

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             G LGH    +   P  V  L     V  SCG  HT A+ +              +++ 
Sbjct: 62  DLGQLGH--EKARKRPEHVGALDAQNIVAVSCGEAHTLALND------------KGQVYA 107

Query: 491 WGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
           WG   +GQLG  G  E   VP  +K   +I   +VACG+  ++AL+   +VFS G   YG
Sbjct: 108 WGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYG 167

Query: 550 QLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
           QLG      K   P  I+  +   + + IA G  H  V++    ++ WG+   GQLG  D
Sbjct: 168 QLGLGYEYKKQNSPHVIKSLLGIPFAQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND 226

Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           + ++  PTL+++LR ++V  + CG + TAA+    GV
Sbjct: 227 DNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGV 263



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 9/160 (5%)

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSD---DISFCKVACGHSITIALTATGQVFSMG 544
           +  WG+ + GQLG G  +  +V L  + SD   +     V CG   T+ +   G V++ G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIV-LEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
             D GQLG   +  K P  + G +  + I  ++CG  H   ++ K +VY WG   +GQLG
Sbjct: 60  CNDLGQLGHEKAR-KRPEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLG 117

Query: 605 -HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
             G  E  + P  +++L + Q+  V CG  +  ++ L KG
Sbjct: 118 LPGTEECIRVPRNIKSLSEIQIVQVACG--YYHSLALSKG 155


>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
           vitripennis]
          Length = 1083

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 173/366 (47%), Gaps = 26/366 (7%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +++ WG  +  G LG  + G+E       + L+P+ L+       + IACG  H VL+TK
Sbjct: 27  NMYCWGSTV-YGELG--LGGIE-----DENILMPRELDFQKATAVEQIACGETHTVLITK 78

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G++FS G    G+LGH  E      ++I  L+       ACG  H+ AV   G L+ WG
Sbjct: 79  DGEVFSCGNNDSGQLGH--EKPTKRLQMIPGLDAFIFKQAACGASHSVAVNNWGQLFCWG 136

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
                   LG    I+H  PR V      + +  I CG  HT A+T+ G+L+ +G  + G
Sbjct: 137 SNADGQLGLGTPLTIAH-TPRMVKALGTSI-VVQIACGKKHTLALTNNGELYAWGSNSDG 194

Query: 434 ALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            LG G D    + P+ +  L  +     +CG +H+  + +            S  +F WG
Sbjct: 195 QLGLGQDVKIETRPKLITGLATIPIAFIACGGYHSIVVSK------------SGAVFGWG 242

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
               GQLG  D   + VP  +K   +     VACG   ++ LT  G VF+ G+  YGQLG
Sbjct: 243 RNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLG 302

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENK 611
              ++ +   R    +    +  I+CG  H +A+V S+ +VY WG G +GQLG     + 
Sbjct: 303 HGANSNEILPRQIIELMGSVVTQISCGKRHTLALVPSRGKVYAWGLGGSGQLGSQTARSV 362

Query: 612 QTPTLV 617
            TP +V
Sbjct: 363 ATPQMV 368



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 158/341 (46%), Gaps = 27/341 (7%)

Query: 310 LVTKQGQIFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
           L+     ++ WG    G+LG G   + ++  P+ +D    + +  +ACGE HT  +T  G
Sbjct: 21  LIPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIACGETHTVLITKDG 80

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ---ISSICCGPWHTAAITSAGKL 424
           ++++ G+  ++ G LG      H  P K    + GL         CG  H+ A+ + G+L
Sbjct: 81  EVFSCGN--NDSGQLG------HEKPTKRLQMIPGLDAFIFKQAACGASHSVAVNNWGQL 132

Query: 425 FTFGDGTFGALGHGDRSSTS-VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
           F +G    G LG G   + +  PR V+ L     V  +CG  HT A+         +NG 
Sbjct: 133 FCWGSNADGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALT--------NNG- 183

Query: 484 SSKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              +L+ WG  ++GQLG G D +    P  +     I    +ACG   +I ++ +G VF 
Sbjct: 184 ---ELYAWGSNSDGQLGLGQDVKIETRPKLITGLATIPIAFIACGGYHSIVVSKSGAVFG 240

Query: 543 MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
            G   +GQLG    + K+   +   +++  ++ +ACG      ++    V+T G G  GQ
Sbjct: 241 WGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQ 300

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
           LGHG N N+  P  +  L    V  + CG   T A+   +G
Sbjct: 301 LGHGANSNEILPRQIIELMGSVVTQISCGKRHTLALVPSRG 341



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 135/282 (47%), Gaps = 23/282 (8%)

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           ++Y WG  ++    LG + + +  +PR++  Q +   +  I CG  HT  IT  G++F+ 
Sbjct: 27  NMYCWGSTVYGELGLGGIEDENILMPRELDFQ-KATAVEQIACGETHTVLITKDGEVFSC 85

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           G+   G LGH     T   + +  L       A+CG  H+ A+                +
Sbjct: 86  GNNDSGQLGH--EKPTKRLQMIPGLDAFIFKQAACGASHSVAVNNWG------------Q 131

Query: 488 LFTWGDGAEGQLGHGDAEPRVV---PLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
           LF WG  A+GQLG G   P  +   P  VK        ++ACG   T+ALT  G++++ G
Sbjct: 132 LFCWGSNADGQLGLG--TPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTNNGELYAWG 189

Query: 545 SADYGQLGSPGSTGKFPTR--IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
           S   GQLG  G   K  TR  +   +    I  IACG YH  VVS    V+ WG+   GQ
Sbjct: 190 SNSDGQLGL-GQDVKIETRPKLITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFGQ 248

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           LG  D  +K  P L++ LR+ +VK V CG  F+  + +  GV
Sbjct: 249 LGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGV 290



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 119/245 (48%), Gaps = 28/245 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+++ WG    +G LG    G ++    R     PK++     +    IACG  H+++V+
Sbjct: 183 GELYAWGSN-SDGQLGL---GQDVKIETR-----PKLITGLATIPIAFIACGGYHSIVVS 233

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K G +F WG  + G+LG    +D   P L+  L  + +  VACGE  +  +T+ G ++T 
Sbjct: 234 KSGAVFGWGRNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTC 293

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGT 431
           G G++  G LG  +  +  +PR++  ++ G  ++ I CG  HT A+  S GK++ +G G 
Sbjct: 294 GAGMY--GQLGHGANSNEILPRQII-ELMGSVVTQISCGKRHTLALVPSRGKVYAWGLGG 350

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT---AAIVEVAGKTSGSNGLSSKKL 488
            G LG     S + P+ V             G W +   +  +EV   +S S     K +
Sbjct: 351 SGQLGSQTARSVATPQMV------------LGPWSSKNRSLAMEVDSASSTSEDCVVKHI 398

Query: 489 FTWGD 493
           F+ GD
Sbjct: 399 FSGGD 403


>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
          Length = 1050

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 164/324 (50%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE
Sbjct: 36  VKEVACGGDHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADEHIVHVACGE 93

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLM--TTEESVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+ + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+     
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             SG+       +F WG    GQLG  D E R  P  VK+        ++CG   T  LT
Sbjct: 206 SLSGA-------VFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLT 258

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
            +G VF+ G+   GQLG      +   R    +    +  IACG  H +A V S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G GA GQLG G   N + P+ V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  ++  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGDHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -LNTKGQLGHEREGNK--PEQI-GALADEHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTTEESVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEEDRESPCHVK-LLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 127/251 (50%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEESVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG  ++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 WG--MNNAGQLGLSDEEDRESPCHVK-LLRAQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA GQLG G
Sbjct: 320 GCGARGQLGTG 330



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG---LGKEFPSQAS-----PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLRAQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 267 GAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 76/163 (46%), Gaps = 31/163 (19%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGN-GLLGGAVNG 273
           G+  A   +  A SF +SLS AV                    +G G+ N G LG +   
Sbjct: 189 GIPLAQVAAGGAHSFALSLSGAV--------------------FGWGMNNAGQLGLS--- 225

Query: 274 VEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
                 DR      K+L +  V+    I+CG +H  ++TK G +F++G GS G+LGH   
Sbjct: 226 ---DEEDRESPCHVKLLRAQKVV---YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDG 375
            D   P+ +  L GS +  +ACG  HT A V  SG +Y +G G
Sbjct: 280 NDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322


>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
           gallus]
          Length = 1056

 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 154/325 (47%), Gaps = 24/325 (7%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + + CG +H V V   G +++ G    G+LGH  E     P+ + AL+  NI  V+CGE 
Sbjct: 37  RDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKARKRPEHVGALDAQNIVAVSCGEA 94

Query: 359 HTCAVTLSGDLYTWG---DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
           HT A+   G +Y WG   DG   LGL G    I   +PR +    E +QI  + CG +H+
Sbjct: 95  HTLALNDKGQVYAWGLATDG--QLGLPGTEECIR--VPRNIKSLSE-IQIVQVACGYYHS 149

Query: 416 AAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            A++   ++F++G   +G LG G +    + P  +++L  +     + G  H+  +    
Sbjct: 150 LALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLT--- 206

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                     S  +F WG    GQLG  D   R VP  +K         + CG   T AL
Sbjct: 207 ---------LSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAAL 257

Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHI-AVVSSKSEVY 593
           T  G VF+ G+  YGQLG   ++ +   R    +    +  I CG  H  A V S   +Y
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGRQHTTAFVPSSGRIY 317

Query: 594 TWGKGANGQLGHGDNENKQTPTLVE 618
           ++G G NGQLG G   N+++P  V+
Sbjct: 318 SFGLGGNGQLGTGTTSNRKSPFTVK 342



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 156/327 (47%), Gaps = 21/327 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      I  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E +   P  V G ++   I ++ CG  HT A+   G+++ +G  T G 
Sbjct: 60  -CNDLGQLGH--EKARKRPEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  G      VPR +++L E++ V  +CG +H+ A+      + GS      ++F+WG 
Sbjct: 116 LGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLAL------SKGS------EVFSWGQ 163

Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G + + +  P  +K    I F ++A G + +  LT +G +F  G   +GQLG
Sbjct: 164 NKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 ++   +  +++ + +  I CG  H A ++ +  V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAIC 639
            P  V  L    V  + CG   T A  
Sbjct: 284 NPRKVFELMGSLVTQITCGRQHTTAFV 310



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 116/230 (50%), Gaps = 15/230 (6%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDA 344
           +P+ ++S   +    +ACG  H++ ++K  ++FSWG+   G+LG G E    + P +I +
Sbjct: 127 VPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKS 186

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           L G     +A G  H+  +TLSG ++ WG   +  G LG   +   ++P  +   +   +
Sbjct: 187 LLGIPFAQIAAGGAHSFVLTLSGAIFGWGR--NKFGQLGLNDDNDRYVPTLLKS-LRTQK 243

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +  ICCG  HTAA+T  G +FTFG G +G LGH   S    PR+V  L        +CG 
Sbjct: 244 VVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSLVTQITCGR 303

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
            HT A V            SS +++++G G  GQLG G    R  P  VK
Sbjct: 304 QHTTAFVP-----------SSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 130/277 (46%), Gaps = 21/277 (7%)

Query: 372 WGDG-IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           WG+     LGL G   EI    PRK S      +I  + CG  HT  +   G ++T G  
Sbjct: 4   WGNASFGQLGLGGIDEEIV-LEPRK-SDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCN 61

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             G LGH    +   P  V  L     V  SCG  HT A+ +              +++ 
Sbjct: 62  DLGQLGH--EKARKRPEHVGALDAQNIVAVSCGEAHTLALND------------KGQVYA 107

Query: 491 WGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
           WG   +GQLG  G  E   VP  +K   +I   +VACG+  ++AL+   +VFS G   YG
Sbjct: 108 WGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNKYG 167

Query: 550 QLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
           QLG      K   P  I+  +   + + IA G  H  V++    ++ WG+   GQLG  D
Sbjct: 168 QLGLGYEYKKQNSPHVIKSLLGIPFAQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLND 226

Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           + ++  PTL+++LR ++V  + CG + TAA+    GV
Sbjct: 227 DNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGV 263



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 9/160 (5%)

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSD---DISFCKVACGHSITIALTATGQVFSMG 544
           +  WG+ + GQLG G  +  +V L  + SD   +     V CG   T+ +   G V++ G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIV-LEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
             D GQLG   +  K P  + G +  + I  ++CG  H   ++ K +VY WG   +GQLG
Sbjct: 60  CNDLGQLGHEKAR-KRPEHV-GALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLG 117

Query: 605 -HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
             G  E  + P  +++L + Q+  V CG  +  ++ L KG
Sbjct: 118 LPGTEECIRVPRNIKSLSEIQIVQVACG--YYHSLALSKG 155


>gi|242016591|ref|XP_002428862.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
           humanus corporis]
 gi|212513605|gb|EEB16124.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
           humanus corporis]
          Length = 516

 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 178/362 (49%), Gaps = 25/362 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + I+CG +H  LV K G++F +G+   G+LG G    V+ P  + +L       VACG+
Sbjct: 38  VKEISCGDEHTALVCKSGRVFLFGKNDFGQLGFGHTKIVNKPSCLKSLKPFQSIHVACGK 97

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ-ISSICCGPWHTA 416
            HT   T    ++ +G   ++ G LG       W+P+ +S  +E    I ++  G  H+A
Sbjct: 98  SHTLISTECNKIFAFG--CNSDGQLGVGDLDDRWVPQMISTDLEKTNNIIALSAGCHHSA 155

Query: 417 AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
            +T  G ++ +GD + G  G  + +    PR++E    + ++  SCG +HTA I      
Sbjct: 156 FLTEEGSVYIWGDNSDGQCGIKNENYLLNPRKIEFQNPINSI--SCGYYHTAFI------ 207

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
                  S  K++T+G+   G+LG  D  P  VP  V++ ++     V CG S TI LT 
Sbjct: 208 -------SLGKVYTFGEDDNGKLGRSDKLPNDVPEGVELDENC--ISVKCGGSHTIILTE 258

Query: 537 TGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
           +G+ ++ GS   GQLG      +F  P R+    ++  +  + CG  H A ++ + ++YT
Sbjct: 259 SGKAYAFGSNFSGQLGLGNFETEFSIPQRVNFTDENVNLIYVTCGESHSAFLTDEGKLYT 318

Query: 595 WGKGANGQLGHGD-NENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICS 653
            G G NG+L + D + N  TPT +E  +      V CG   T  + L K + + +H   S
Sbjct: 319 CGDGRNGKLCNEDESTNICTPTTIEMFKSFFCTYVSCGGCHT--MVLAKALKLENHENAS 376

Query: 654 GC 655
            C
Sbjct: 377 EC 378



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 149/307 (48%), Gaps = 27/307 (8%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI--DA 344
           P  L+S     +  +ACG  H ++ T+  +IF++G  S G+LG G   D   P++I  D 
Sbjct: 79  PSCLKSLKPFQSIHVACGKSHTLISTECNKIFAFGCNSDGQLGVGDLDDRWVPQMISTDL 138

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
              +NI  ++ G  H+  +T  G +Y WGD  ++ G  G  +E     PRK+  Q     
Sbjct: 139 EKTNNIIALSAGCHHSAFLTEEGSVYIWGD--NSDGQCGIKNENYLLNPRKIEFQN---P 193

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           I+SI CG +HTA I S GK++TFG+   G LG  D+    VP  VE L E   +   CG 
Sbjct: 194 INSISCGYYHTAFI-SLGKVYTFGEDDNGKLGRSDKLPNDVPEGVE-LDE-NCISVKCGG 250

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDD-ISFC 522
            HT  + E            S K + +G    GQLG G+ E    +P  V  +D+ ++  
Sbjct: 251 SHTIILTE------------SGKAYAFGSNFSGQLGLGNFETEFSIPQRVNFTDENVNLI 298

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGS 580
            V CG S +  LT  G++++ G    G+L +   +     PT IE   K  +   ++CG 
Sbjct: 299 YVTCGESHSAFLTDEGKLYTCGDGRNGKLCNEDESTNICTPTTIEM-FKSFFCTYVSCGG 357

Query: 581 YHIAVVS 587
            H  V++
Sbjct: 358 CHTMVLA 364



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 10/99 (10%)

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           TG VF+ G + + +     S+  F       +++  +++I+CG  H A+V     V+ +G
Sbjct: 12  TGAVFTFGKSRFAE---DLSSHFF-------VRNDPVKEISCGDEHTALVCKSGRVFLFG 61

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           K   GQLG G  +    P+ +++L+  Q   V CG + T
Sbjct: 62  KNDFGQLGFGHTKIVNKPSCLKSLKPFQSIHVACGKSHT 100


>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
 gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
          Length = 1348

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 170/347 (48%), Gaps = 43/347 (12%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGE--GSGGKLGHGV---EADVSYPKL 341
           P+ + S    D   +A G++H+V VT  G+++++G+  G G  L       EA +  P++
Sbjct: 199 PRSVSSLDGRDVTHVAGGARHSVAVTSAGEVYAFGDCSGEGKALSAPTRLREAVIDPPEV 258

Query: 342 IDALNG-SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQ--------VSEISHWI 392
               N    +  VACG+ H  AVT SG L +WG+     G LGQ          +    I
Sbjct: 259 TATTNAMPRVATVACGQRHCAAVTTSGVLLSWGN--EEFGQLGQGPPRDSSSKGDAKSLI 316

Query: 393 PRKVSGQMEG-------LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
            R+    M         ++ +S+ CG  HT A+T+ G++F+FG G FGALGHGDR +  V
Sbjct: 317 RRRADASMMPRLVGSGHVKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDV 376

Query: 446 PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE 505
           PR V+ L  +     + G  H+A++             +S +++TWG G  G LGH D +
Sbjct: 377 PRLVDALWGVGVAQIAAGDNHSASLS------------ASGRVYTWGRGKYGALGHRDVD 424

Query: 506 PRVVPLCVKVSDDISF-C-KVACG--HSITIALTATGQVFSMGSADYGQLGSPGSTGKF- 560
            R  P  V+  DD    C ++ACG  H++ IA   +G + + G    G  G+ G+T    
Sbjct: 425 NRSRPTPVQALDDAGVRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGT-GATADVL 483

Query: 561 -PTRIE-GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
            PT I+   +    +  I+ GS H   V+    VYTWG    GQLGH
Sbjct: 484 TPTIIDRALLGDEKVFQISAGSKHSVAVTEGGCVYTWGARTQGQLGH 530



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 177/362 (48%), Gaps = 53/362 (14%)

Query: 317 IFSWGEGSGGKLGHGV------------EADVSYP--KLIDALNGSNIHMVACGEFHTCA 362
           +++WG    G+LG G             EA  +YP  + + +L+G ++  VA G  H+ A
Sbjct: 163 LYAWGRCDAGQLGFGAGGFGAPTSRDSSEAAEAYPTPRSVSSLDGRDVTHVAGGARHSVA 222

Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWI--PRKVSGQMEGL-QISSICCGPWHTAAIT 419
           VT +G++Y +GD       L   + +   +  P +V+     + +++++ CG  H AA+T
Sbjct: 223 VTSAGEVYAFGDCSGEGKALSAPTRLREAVIDPPEVTATTNAMPRVATVACGQRHCAAVT 282

Query: 420 SAGKLFTFGDGTFGALGHG-DRSSTS----------------VPREVETLKELKTVMASC 462
           ++G L ++G+  FG LG G  R S+S                +PR V +   +K    +C
Sbjct: 283 TSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMPRLVGS-GHVKFTSVAC 341

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
           G  HT A+         +NG    ++F++G GA G LGHGD     VP  V     +   
Sbjct: 342 GAGHTLALT--------ANG----RVFSFGRGAFGALGHGDRLNCDVPRLVDALWGVGVA 389

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEG-NIKHRYIEDIACGS 580
           ++A G + + +L+A+G+V++ G   YG LG      +  PT ++  +      E IACG 
Sbjct: 390 QIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGVRCEQIACGG 449

Query: 581 YH-IAVVSSKSEV-YTWGKGANGQLGHGDNENKQTPTLVE--ALRDKQVKSVVCGSNFTA 636
            H +A+    S V   WG+G++G  G G   +  TPT+++   L D++V  +  GS  + 
Sbjct: 450 DHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDEKVFQISAGSKHSV 509

Query: 637 AI 638
           A+
Sbjct: 510 AV 511



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 127/272 (46%), Gaps = 39/272 (14%)

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD--GTFGALGHGDRSSTSV--PRE 448
           PR VS  ++G  ++ +  G  H+ A+TSAG+++ FGD  G   AL    R   +V  P E
Sbjct: 199 PRSVS-SLDGRDVTHVAGGARHSVAVTSAGEVYAFGDCSGEGKALSAPTRLREAVIDPPE 257

Query: 449 VE--TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD--- 503
           V   T    +    +CG  H AA+             +S  L +WG+   GQLG G    
Sbjct: 258 VTATTNAMPRVATVACGQRHCAAVT------------TSGVLLSWGNEEFGQLGQGPPRD 305

Query: 504 --------------AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
                         A+  ++P  V  S  + F  VACG   T+ALTA G+VFS G   +G
Sbjct: 306 SSSKGDAKSLIRRRADASMMPRLVG-SGHVKFTSVACGAGHTLALTANGRVFSFGRGAFG 364

Query: 550 QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            LG          R+   +    +  IA G  H A +S+   VYTWG+G  G LGH D +
Sbjct: 365 ALGHGDRLNCDVPRLVDALWGVGVAQIAAGDNHSASLSASGRVYTWGRGKYGALGHRDVD 424

Query: 610 NKQTPTLVEALRDKQVK--SVVCGSNFTAAIC 639
           N+  PT V+AL D  V+   + CG + T AI 
Sbjct: 425 NRSRPTPVQALDDAGVRCEQIACGGDHTLAIA 456



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 160/326 (49%), Gaps = 49/326 (15%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADR-RDALL--PKVLESTVVLD-AQSIACGSKHA 308
           G+V+ +G+  G G          +S+  R R+A++  P+V  +T  +    ++ACG +H 
Sbjct: 227 GEVYAFGDCSGEG--------KALSAPTRLREAVIDPPEVTATTNAMPRVATVACGQRHC 278

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVS-----------------YPKLIDALNGSNIH 351
             VT  G + SWG    G+LG G   D S                  P+L+ +       
Sbjct: 279 AAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMPRLVGS-GHVKFT 337

Query: 352 MVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCG 411
            VACG  HT A+T +G ++++G G    G LG    ++  +PR V   + G+ ++ I  G
Sbjct: 338 SVACGAGHTLALTANGRVFSFGRGA--FGALGHGDRLNCDVPRLVDA-LWGVGVAQIAAG 394

Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAA 469
             H+A+++++G+++T+G G +GALGH D  + S P  V+ L +  ++    +CG  HT A
Sbjct: 395 DNHSASLSASGRVYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGVRCEQIACGGDHTLA 454

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK---VSDDISFCKVAC 526
           I   AG  SG        L  WG G+ G  G G     + P  +    + D+  F +++ 
Sbjct: 455 I---AGGGSGV-------LLAWGRGSSGPAGTGATADVLTPTIIDRALLGDEKVF-QISA 503

Query: 527 GHSITIALTATGQVFSMGSADYGQLG 552
           G   ++A+T  G V++ G+   GQLG
Sbjct: 504 GSKHSVAVTEGGCVYTWGARTQGQLG 529



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 117/232 (50%), Gaps = 23/232 (9%)

Query: 281 RRDA-LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
           R DA ++P+++ S  V    S+ACG+ H + +T  G++FS+G G+ G LGHG   +   P
Sbjct: 319 RADASMMPRLVGSGHV-KFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDVP 377

Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ 399
           +L+DAL G  +  +A G+ H+ +++ SG +YTWG G +  G LG     +   P  V   
Sbjct: 378 RLVDALWGVGVAQIAAGDNHSASLSASGRVYTWGRGKY--GALGHRDVDNRSRPTPVQAL 435

Query: 400 ME-GLQISSICCGPWHTAAITSAGK--LFTFGDGTFGALGHGDRSSTSVPREVE--TLKE 454
            + G++   I CG  HT AI   G   L  +G G+ G  G G  +    P  ++   L +
Sbjct: 436 DDAGVRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVLTPTIIDRALLGD 495

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH--GDA 504
            K    S G  H+ A+ E               ++TWG   +GQLGH  GDA
Sbjct: 496 EKVFQISAGSKHSVAVTE------------GGCVYTWGARTQGQLGHELGDA 535


>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
 gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
          Length = 1054

 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 189/405 (46%), Gaps = 29/405 (7%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           D+F WG    +G LG  + G+E         L+P  +        + IACG +H + +T 
Sbjct: 2   DLFCWGNA-SHGQLG--MGGIE-----DEQILIPSQIPWKPDAPLRQIACGHRHTLFLTA 53

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G++++ G     +LGH +      P LI  L    +  +ACG  H+ A+T  G + +WG
Sbjct: 54  NGKVYACGNNDQAQLGHNLPT--KRPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWG 111

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
           D  ++ G LGQ ++ S     K+   +    +  I CG  H+ A+TS G+L+++G   +G
Sbjct: 112 D--NDCGQLGQSTDQSIIELPKIIRSLVSKHVVQIACGNNHSLALTSCGELYSWGSNIYG 169

Query: 434 ALG---HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            LG     + S  + P  + TL  +     +CG  H+  I +            S  +F 
Sbjct: 170 QLGVKPPQELSHCNYPLRLTTLLGIPLATIACGGNHSFLISK------------SSAVFG 217

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G    GQLG  D   R  P  +K    +    VACG   ++ LT  G VF+ G+  YGQ
Sbjct: 218 FGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQ 277

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG   +T +   R+   +    I  +ACG+ H +A+V S+  VY +G G++GQLG+    
Sbjct: 278 LGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGNRSTN 337

Query: 610 NKQTPTLVEALRDKQVKSVVCGSN-FTAAICLHKGVSIADHSICS 653
           +   P  V         S +  SN   A++ +H+  S  D SI +
Sbjct: 338 SVTLPQEVLGPWVSPSDSALLQSNDAKASVVIHQIFSGGDQSIVT 382


>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
          Length = 983

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 164/324 (50%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  
Sbjct: 94  SHSLALSDQGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+ + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+     
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             SG+       +F WG    GQLG  D + R  P  VK+        ++CG   T  LT
Sbjct: 206 SLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
            +G VF+ G+   GQLG      +   R    +    +  IACG  H +A V S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G GA GQLG G   N + P+ V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  ++  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -LNTKGQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 127/251 (50%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG  ++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA GQLG G
Sbjct: 320 GCGARGQLGTG 330



 Score = 81.3 bits (199), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG---LGKEFPSQAS-----PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 267 GAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
 gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
          Length = 1054

 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 164/324 (50%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE
Sbjct: 40  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 97

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  
Sbjct: 98  SHSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 154

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+ + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+     
Sbjct: 155 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 209

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             SG+       +F WG    GQLG  D + R  P  VK+        ++CG   T  LT
Sbjct: 210 SLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 262

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
            +G VF+ G+   GQLG      +   R    +    +  IACG  H +A V S   +Y 
Sbjct: 263 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 322

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G GA GQLG G   N + P+ V+
Sbjct: 323 FGCGARGQLGTGHTCNVKCPSPVK 346



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  ++  VACG  H+  +   G++YT G 
Sbjct: 5   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG- 63

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 64  -LNTKGQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 119

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 120 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 167

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 168 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 227

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 228 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 286

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 287 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 322



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 127/251 (50%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 107 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 157

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 158 ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 217

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG  ++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 218 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 274

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 275 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 323

Query: 492 GDGAEGQLGHG 502
           G GA GQLG G
Sbjct: 324 GCGARGQLGTG 334



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 160 GQFFTWGKN-SHGQLG---LGKEFPSQAS-----PQRVRSLEGIPLAQVAAGGAHSFALS 210

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 211 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 270

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 271 GAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 327

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 328 RGQLGTGHTCNVKCPSPVK 346



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 35/165 (21%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGV 274
           G+  A   +  A SF +SLS                  G VF WG            N  
Sbjct: 193 GIPLAQVAAGGAHSFALSLS------------------GAVFGWGMN----------NAG 224

Query: 275 EISSADRRDALLP---KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG 331
           ++  +D +D   P   K+L +  V+    I+CG +H  ++TK G +F++G GS G+LGH 
Sbjct: 225 QLGLSDEKDRESPCHVKLLRTQKVV---YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 281

Query: 332 VEADVSYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDG 375
              D   P+ +  L GS +  +ACG  HT A V  SG +Y +G G
Sbjct: 282 SMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 326


>gi|390360684|ref|XP_003729747.1| PREDICTED: uncharacterized protein LOC100892600 [Strongylocentrotus
           purpuratus]
          Length = 946

 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 144/305 (47%), Gaps = 33/305 (10%)

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
           I  VA    H   VT    +Y+WG+G  + G LG        +P  V   ++G  I+ + 
Sbjct: 79  IRQVAVSRTHIALVTYERVVYSWGEG--SKGQLGHGDLDPRNVPTSVEA-LKGKSITRVA 135

Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA 469
           CG   +   +  G + T GDG+ G LGHGD  S S PR +ETL  +     SCG  H   
Sbjct: 136 CGAGFSVFGSDNGIVMTCGDGSTGCLGHGDYHSASRPRLIETLLSVDVTSISCGPEHVVG 195

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHS 529
           +        G +G    ++F WG G +G+LG GD E    P+ V + D +   +V CG  
Sbjct: 196 V--------GVDG----EIFAWGKGKDGRLGLGDEEDFCEPMEVTLRDPVFIQEVKCGVD 243

Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTG-----------------KFPTRIEGNIKHRY 572
            T+ LT  G + + GS  Y +LG     G                 K PT ++   K R 
Sbjct: 244 GTMFLTDMGCLLACGSNAYNKLGLNHRQGFLASMKNMFTKTEVEGRKVPTAVKALSKFRV 303

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
           + D+  G +H AVV     VY +GK  +GQLG G+ + ++ P  V+ + DK + +V CG 
Sbjct: 304 L-DMVVGPHHSAVVVEPGLVYMFGKNQHGQLGFGNTKPREAPAQVQTMADKLISTVACGE 362

Query: 633 NFTAA 637
           ++T A
Sbjct: 363 DYTVA 367



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 147/321 (45%), Gaps = 15/321 (4%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
           +P  +E   +L  + +A    H  LVT +  ++SWGEGS G+LGHG     + P  ++AL
Sbjct: 67  IPFKIELPTILKIRQVAVSRTHIALVTYERVVYSWGEGSKGQLGHGDLDPRNVPTSVEAL 126

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
            G +I  VACG   +   + +G + T GDG  + G LG     S   PR +   +  + +
Sbjct: 127 KGKSITRVACGAGFSVFGSDNGIVMTCGDG--STGCLGHGDYHSASRPRLIETLL-SVDV 183

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
           +SI CGP H   +   G++F +G G  G LG GD      P EV     +      CGV 
Sbjct: 184 TSISCGPEHVVGVGVDGEIFAWGKGKDGRLGLGDEEDFCEPMEVTLRDPVFIQEVKCGVD 243

Query: 466 HTAAIVEVAGKTS-GSN-----GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
            T  + ++    + GSN     GL+ ++ F      +      + E R VP  VK     
Sbjct: 244 GTMFLTDMGCLLACGSNAYNKLGLNHRQGFLA--SMKNMFTKTEVEGRKVPTAVKALSKF 301

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIA 577
               +  G   +  +   G V+  G   +GQLG  G+T   + P +++  +  + I  +A
Sbjct: 302 RVLDMVVGPHHSAVVVEPGLVYMFGKNQHGQLGF-GNTKPREAPAQVQ-TMADKLISTVA 359

Query: 578 CGSYHIAVVSSKSEVYTWGKG 598
           CG  +    +  + +Y WGKG
Sbjct: 360 CGEDYTVAGAMDNFLYLWGKG 380



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 25/232 (10%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D   A  P+++E+ + +D  SI+CG +H V V   G+IF+WG+G  G+LG G E D
Sbjct: 161 LGHGDYHSASRPRLIETLLSVDVTSISCGPEHVVGVGVDGEIFAWGKGKDGRLGLGDEED 220

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGL---LGQVSEISHW 391
              P  +   +   I  V CG   T  +T  G L   G   +N LGL    G ++ + + 
Sbjct: 221 FCEPMEVTLRDPVFIQEVKCGVDGTMFLTDMGCLLACGSNAYNKLGLNHRQGFLASMKNM 280

Query: 392 IP------RKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSS 442
                   RKV   ++ L   ++  +  GP H+A +   G ++ FG    G LG G+   
Sbjct: 281 FTKTEVEGRKVPTAVKALSKFRVLDMVVGPHHSAVVVEPGLVYMFGKNQHGQLGFGNTKP 340

Query: 443 TSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG 494
              P +V+T+ +      +CG  +T A            G     L+ WG G
Sbjct: 341 REAPAQVQTMADKLISTVACGEDYTVA------------GAMDNFLYLWGKG 380



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 2/131 (1%)

Query: 509 VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGN 567
           +P  +++   +   +VA   +    +T    V+S G    GQLG      +  PT +E  
Sbjct: 67  IPFKIELPTILKIRQVAVSRTHIALVTYERVVYSWGEGSKGQLGHGDLDPRNVPTSVEA- 125

Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKS 627
           +K + I  +ACG+      S    V T G G+ G LGHGD  +   P L+E L    V S
Sbjct: 126 LKGKSITRVACGAGFSVFGSDNGIVMTCGDGSTGCLGHGDYHSASRPRLIETLLSVDVTS 185

Query: 628 VVCGSNFTAAI 638
           + CG      +
Sbjct: 186 ISCGPEHVVGV 196



 Score = 46.6 bits (109), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 86/219 (39%), Gaps = 38/219 (17%)

Query: 233 LSSAVSSSSQGSCHEDFDGL-GDVFIWGEGLGNGL-LGGAVNGVEISSADRRDALLPKVL 290
           LS  V+S S G  H    G+ G++F WG+G    L LG   +  E      RD +     
Sbjct: 179 LSVDVTSISCGPEHVVGVGVDGEIFAWGKGKDGRLGLGDEEDFCEPMEVTLRDPVF---- 234

Query: 291 ESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG----HGVEADVS--------- 337
                   Q + CG    + +T  G + + G  +  KLG     G  A +          
Sbjct: 235 -------IQEVKCGVDGTMFLTDMGCLLACGSNAYNKLGLNHRQGFLASMKNMFTKTEVE 287

Query: 338 ---YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
               P  + AL+   +  +  G  H+  V   G +Y +G   H  G LG      +  PR
Sbjct: 288 GRKVPTAVKALSKFRVLDMVVGPHHSAVVVEPGLVYMFGKNQH--GQLG----FGNTKPR 341

Query: 395 KVSGQMEGLQ---ISSICCGPWHTAAITSAGKLFTFGDG 430
           +   Q++ +    IS++ CG  +T A      L+ +G G
Sbjct: 342 EAPAQVQTMADKLISTVACGEDYTVAGAMDNFLYLWGKG 380


>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
           carolinensis]
          Length = 1109

 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 171/360 (47%), Gaps = 35/360 (9%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H++ + + G++++ G  + G+LGH  E + S P+ I AL   +I  VACGE
Sbjct: 95  VKEVACGGNHSIFLLEDGEVYTCGVNTKGQLGH--EKEGSKPEQIGALADQHIIHVACGE 152

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            H+ A++  G L++WG G    LGL    +E S  +PR +  ++    I  + CG WH  
Sbjct: 153 SHSLALSDQGRLFSWGAGSDGQLGL--TTTEDSVAVPRLIK-KLNQEMILQVSCGNWHCL 209

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+ + G+ F +G  + G LG G +  S + P+ V++L  +     + G  H+ A+     
Sbjct: 210 ALAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFAL----- 264

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             SG+       +F WG    GQLG  D + R  P  VK+        ++CG   T  LT
Sbjct: 265 SLSGA-------VFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLT 317

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
            TG VF+ G+   GQLG      +   R    +    +  IACG  H +A V S   +Y 
Sbjct: 318 KTGGVFTFGAGSCGQLGHDSFNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYA 377

Query: 595 WGKGANGQLGHGDNENKQTPTLV---------------EALRDKQVKSVVCGSNFTAAIC 639
           +G G  GQLG G   N + P+ V               +A +   VK +  G + T  +C
Sbjct: 378 FGCGIKGQLGSGHTCNLKCPSPVKGHWAAHNEPVSRRADACKHYVVKHIFSGGDQTFVLC 437



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 162/340 (47%), Gaps = 23/340 (6%)

Query: 313 KQGQIFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           K  ++  WG  S G  G    V+  +  P+    ++  ++  VACG  H+  +   G++Y
Sbjct: 56  KGKKMLCWGYWSFGYPGTSSTVQPIILEPRTSGFIHERSVKEVACGGNHSIFLLEDGEVY 115

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           T G  ++  G LG   E S   P ++ G +    I  + CG  H+ A++  G+LF++G G
Sbjct: 116 TCG--VNTKGQLGHEKEGSK--PEQI-GALADQHIIHVACGESHSLALSDQGRLFSWGAG 170

Query: 431 TFGALG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
           + G LG      S +VPR ++ L +   +  SCG WH  A+             +  + F
Sbjct: 171 SDGQLGLTTTEDSVAVPRLIKKLNQEMILQVSCGNWHCLALA------------ADGQFF 218

Query: 490 TWGDGAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            WG  + GQLG G   P +  P  VK  D I   +VA G + + AL+ +G VF  G    
Sbjct: 219 AWGQNSHGQLGLGKEFPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNTS 278

Query: 549 GQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
           GQLG S     + P  ++  ++ + +  I+CGS H AV++    V+T+G G+ GQLGH  
Sbjct: 279 GQLGLSDEQDRESPCHVK-LLRTQKVVYISCGSDHTAVLTKTGGVFTFGAGSCGQLGHDS 337

Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             ++  P  V  L   +V  + CG   T A     G+  A
Sbjct: 338 FNDEVNPRRVLELMGSEVSQIACGRQHTLAFVPSSGLIYA 377



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ ++S   +    +A G  H+  ++
Sbjct: 215 GQFFAWGQN-SHGQLG---LGKEFPSQAS-----PQRVKSLDGIPLAQVAAGGAHSFALS 265

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG+ + G+LG   E D   P  +  L    +  ++CG  HT  +T +G ++T+
Sbjct: 266 LSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLLRTQKVVYISCGSDHTAVLTKTGGVFTF 325

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G ++S I CG  HT A + S+G ++ FG G 
Sbjct: 326 GAG--SCGQLGHDSFNDEVNPRRVL-ELMGSEVSQIACGRQHTLAFVPSSGLIYAFGCGI 382

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 383 KGQLGSGHTCNLKCPSPVK 401


>gi|348534545|ref|XP_003454762.1| PREDICTED: hypothetical protein LOC100691941 [Oreochromis
           niloticus]
          Length = 1536

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/340 (32%), Positives = 170/340 (50%), Gaps = 31/340 (9%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           IACG +H  L+T+ G++F +G  + G+LG G +  V+ P  + AL    + +VACG  HT
Sbjct: 41  IACGDEHTALITENGKLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVQLVACGRNHT 100

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
              T  G +Y  G        LG   E + +  +++        I  +  G   +AA+T 
Sbjct: 101 LICTAKGKVYASGGNSEGQLGLGDCEERTSF--KRLDFFDSQGPIKMLAAGSNTSAALTV 158

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           +GKLF +GD T G +G G  S  S P+EV   + +  V  SCG +H+ A+V V G     
Sbjct: 159 SGKLFMWGDNTEGQIGLGKESQVSSPQEVSVGQPISWV--SCGYYHS-ALVTVDG----- 210

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAE---PRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
                  L+T+G+   G+LG G  +    RV  L   + + +   +VACG   T+AL A 
Sbjct: 211 ------ALYTFGERDSGKLGLGTHQLPGHRVPQLVKSIKEPVR--QVACGGGHTVAL-AE 261

Query: 538 GQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH----RYIEDIACGSYHIAVVSSKSEVY 593
           G V++ G   +GQLG    T  F +R+   ++H    R  + + CG  H AV++    +Y
Sbjct: 262 GNVYTFGLGQFGQLGH--GTFIFESRVPRLVEHFKKGRACQ-VVCGENHTAVITEDGLLY 318

Query: 594 TWGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCG 631
           T+G G +G+LG G+    N+  PTL        V+  +CG
Sbjct: 319 TFGDGRHGKLGLGEENFTNQFKPTLCLRFLKYNVQGAMCG 358



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 101/308 (32%), Positives = 156/308 (50%), Gaps = 32/308 (10%)

Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALN 346
           K L+S  V   Q +ACG  H ++ T +G++++ G  S G+LG G  E   S+ +L    +
Sbjct: 83  KALKSEKV---QLVACGRNHTLICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFFDS 139

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
              I M+A G   + A+T+SG L+ WGD       LG+ S++S   P++VS    G  IS
Sbjct: 140 QGPIKMLAAGSNTSAALTVSGKLFMWGDNTEGQIGLGKESQVSS--PQEVS---VGQPIS 194

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS--STSVPREVETLKELKTVMASCGV 464
            + CG +H+A +T  G L+TFG+   G LG G        VP+ V+++KE      +CG 
Sbjct: 195 WVSCGYYHSALVTVDGALYTFGERDSGKLGLGTHQLPGHRVPQLVKSIKE-PVRQVACGG 253

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD--AEPRVVPLCVKVSDDISFC 522
            HT A+ E               ++T+G G  GQLGHG    E R VP  V+       C
Sbjct: 254 GHTVALAE-------------GNVYTFGLGQFGQLGHGTFIFESR-VPRLVEHFKKGRAC 299

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQ--LGSPGSTGKF-PTRIEGNIKHRYIEDIACG 579
           +V CG + T  +T  G +++ G   +G+  LG    T +F PT     +K+  ++   CG
Sbjct: 300 QVVCGENHTAVITEDGLLYTFGDGRHGKLGLGEENFTNQFKPTLCLRFLKYN-VQGAMCG 358

Query: 580 SYHIAVVS 587
             H+ V++
Sbjct: 359 GCHMVVLA 366



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 140/290 (48%), Gaps = 23/290 (7%)

Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
           +ACG+ HT  +T +G L+ +G   +N G LG  S+++   P  V   ++  ++  + CG 
Sbjct: 41  IACGDEHTALITENGKLFMFGS--NNWGQLGLGSKVTVNKPTCVKA-LKSEKVQLVACGR 97

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
            HT   T+ GK++  G  + G LG GD    +  + ++       +       +T+A + 
Sbjct: 98  NHTLICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFFDSQGPIKMLAAGSNTSAALT 157

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
           V+GK           LF WGD  EGQ+G G       P  V V   IS+  V+CG+  + 
Sbjct: 158 VSGK-----------LFMWGDNTEGQIGLGKESQVSSPQEVSVGQPISW--VSCGYYHSA 204

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKFPT-RIEGNIK--HRYIEDIACGSYHIAVVSSK 589
            +T  G +++ G  D G+LG    T + P  R+   +K     +  +ACG  H  V  ++
Sbjct: 205 LVTVDGALYTFGERDSGKLGL--GTHQLPGHRVPQLVKSIKEPVRQVACGGGH-TVALAE 261

Query: 590 SEVYTWGKGANGQLGHGDNE-NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             VYT+G G  GQLGHG      + P LVE  +  +   VVCG N TA I
Sbjct: 262 GNVYTFGLGQFGQLGHGTFIFESRVPRLVEHFKKGRACQVVCGENHTAVI 311



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 75/136 (55%), Gaps = 8/136 (5%)

Query: 509 VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGS--TGKFPTRIEG 566
           +P    + +DI   ++ACG   T  +T  G++F  GS ++GQLG  GS  T   PT ++ 
Sbjct: 27  IPSKFWLKNDIPL-RIACGDEHTALITENGKLFMFGSNNWGQLGL-GSKVTVNKPTCVKA 84

Query: 567 NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ-- 624
            +K   ++ +ACG  H  + ++K +VY  G  + GQLG GD E + +   ++   D Q  
Sbjct: 85  -LKSEKVQLVACGRNHTLICTAKGKVYASGGNSEGQLGLGDCEERTSFKRLDFF-DSQGP 142

Query: 625 VKSVVCGSNFTAAICL 640
           +K +  GSN +AA+ +
Sbjct: 143 IKMLAAGSNTSAALTV 158



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 21/138 (15%)

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKFPTR--IEGNIKHRYIEDIACGSYHIAVVSSKSE 591
           +  +G VF+ G + +            P++  ++ +I  R    IACG  H A+++   +
Sbjct: 9   IPESGAVFTFGKSKFAD--------NIPSKFWLKNDIPLR----IACGDEHTALITENGK 56

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSI 651
           ++ +G    GQLG G       PT V+AL+ ++V+ V CG N T  IC  KG   A    
Sbjct: 57  LFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVQLVACGRNHT-LICTAKGKVYASGGN 115

Query: 652 CSG------CRNQFNFRR 663
             G      C  + +F+R
Sbjct: 116 SEGQLGLGDCEERTSFKR 133



 Score = 40.4 bits (93), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 2/83 (2%)

Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE--ADVSYPK 340
           ++ +P+++E      A  + CG  H  ++T+ G ++++G+G  GKLG G E   +   P 
Sbjct: 283 ESRVPRLVEHFKKGRACQVVCGENHTAVITEDGLLYTFGDGRHGKLGLGEENFTNQFKPT 342

Query: 341 LIDALNGSNIHMVACGEFHTCAV 363
           L       N+    CG  H   +
Sbjct: 343 LCLRFLKYNVQGAMCGGCHMVVL 365


>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
           [Acyrthosiphon pisum]
          Length = 4257

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 187/390 (47%), Gaps = 32/390 (8%)

Query: 252 LGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           L +VF+WG    N    GA    +I          P+++ S  + D Q +  G     ++
Sbjct: 341 LSEVFMWGSNSSNQHAEGATEVTDI----------PRLVRS--LSDVQQVEAGQYCTFII 388

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGD 368
             +G + + G+ S G+LG G  ++   PK I+      I  V+     + H+ A++ +G+
Sbjct: 389 DTKGCVSACGKNSYGRLGLGNSSNQPVPKRINI--NCKIKQVSSSKGCDGHSLALSDTGE 446

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +Y+WGDG  + G LG     +H  P+ + G   G  I  +  G  H+AA+TS G+L+T+G
Sbjct: 447 VYSWGDG--DYGKLGHGDVATHKEPKLIQGPFIGKVIELVSAGYRHSAAVTSDGQLYTWG 504

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           +G  G LGHGD +   +P  V++L ++     +CG  HT A     G T          +
Sbjct: 505 EGDHGRLGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHTLACSR-DGNT----------V 553

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           +++G G  G+LGHG+      P  ++        KVA G   ++ALT TG+VF+ G    
Sbjct: 554 WSFGSGDNGKLGHGNTIRLYKPQKIEGLRHYKIKKVAAGIHFSVALTCTGEVFTWGQGSN 613

Query: 549 GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
              GS   T   P  +E ++  + I DI+ G  H   ++    VY WG    GQ G G +
Sbjct: 614 LGCGSSEITLFSPAVVE-DLMQQMIIDISVGDSHCLALTRNCAVYAWGSNGKGQCGQGHS 672

Query: 609 ENKQT-PTLVEALRDKQVKSVVCGSNFTAA 637
            +  + P+ V  L  KQ+  +  G++ + A
Sbjct: 673 TSPVSRPSKVINLEGKQINQISAGTSHSVA 702



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 178/389 (45%), Gaps = 32/389 (8%)

Query: 254  DVFIWGEGLGNGLLGGAVNG--VEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
            D ++WG G  NG LG    G  + I S        P  +++  +  AQ I CG     ++
Sbjct: 3393 DAYLWGNG-RNGQLGDTAVGQCINIWS--------PIKIQNFKI--AQRIVCGQNCTFVL 3441

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGD 368
            T QG + S GEG+ G+LGHG    +    +I AL G  I  V+     + H+ A+T +G+
Sbjct: 3442 TSQGTVLSCGEGNYGRLGHGHSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTETGE 3501

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +++WGDG  + G LG  +      P+ +    + + I  + CG  H+A ++  G+++ FG
Sbjct: 3502 VFSWGDG--DFGKLGHGNNERQRKPKLIESLYDVVVIQ-VACGHKHSAVLSQDGEVYVFG 3558

Query: 429  DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
                G LG G   +   P ++     L     +CG  HT  I E               +
Sbjct: 3559 SAEHGKLGLGGHINKKRPTKIVHKGFLNIKYIACGQNHTICIGE-------------NVV 3605

Query: 489  FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            + +G+G  G+LG G  +   VP  +   +  +  K  CG+  T+ L+  G+++S GS + 
Sbjct: 3606 WAFGEGEGGKLGIGSKKDIYVPQEIITLNGKNIKKAYCGNGFTMFLSEDGELYSCGSDNL 3665

Query: 549  GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
                    T K         + + + D+A G  H+ V++++  V+ WG    G LG G +
Sbjct: 3666 QDATDVLYTEKLIPEKIFEFQGQIVTDVATGPDHVLVLTARGHVWAWGNNCEGILGFGHD 3725

Query: 609  ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
               Q P +++ L DK +K +       AA
Sbjct: 3726 LPVQKPMIIQILSDKNIKQIATSRTHCAA 3754



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 141/279 (50%), Gaps = 30/279 (10%)

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           +++ WG    N    G  +E++  IPR V    +  Q+ +   G + T  I + G +   
Sbjct: 343 EVFMWGSNSSNQHAEG-ATEVTD-IPRLVRSLSDVQQVEA---GQYCTFIIDTKGCVSAC 397

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV-WHTAAIVEVAGKTSGSNGLSSK 486
           G  ++G LG G+ S+  VP+ +    ++K V +S G   H+ A+ +              
Sbjct: 398 GKNSYGRLGLGNSSNQPVPKRININCKIKQVSSSKGCDGHSLALSDTG------------ 445

Query: 487 KLFTWGDGAEGQLGHGDA----EPRVV--PLCVKVSDDISFCKVACGHSITIALTATGQV 540
           ++++WGDG  G+LGHGD     EP+++  P   KV +      V+ G+  + A+T+ GQ+
Sbjct: 446 EVYSWGDGDYGKLGHGDVATHKEPKLIQGPFIGKVIE-----LVSAGYRHSAAVTSDGQL 500

Query: 541 FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGA 599
           ++ G  D+G+LG      +F   +  ++    +  +ACGS H +A     + V+++G G 
Sbjct: 501 YTWGEGDHGRLGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHTLACSRDGNTVWSFGSGD 560

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           NG+LGHG+      P  +E LR  ++K V  G +F+ A+
Sbjct: 561 NGKLGHGNTIRLYKPQKIEGLRHYKIKKVAAGIHFSVAL 599



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 130/303 (42%), Gaps = 47/303 (15%)

Query: 295  VLDAQSIACGSK-HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMV 353
            V+   S + GS  H++ +T+ G++FSWG+G  GKLGHG       PKLI++L    +  V
Sbjct: 3479 VITQVSTSIGSDGHSLALTETGEVFSWGDGDFGKLGHGNNERQRKPKLIESLYDVVVIQV 3538

Query: 354  ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
            ACG  H+  ++  G++Y +G   H  G LG    I+   P K+  +   L I  I CG  
Sbjct: 3539 ACGHKHSAVLSQDGEVYVFGSAEH--GKLGLGGHINKKRPTKIVHK-GFLNIKYIACGQN 3595

Query: 414  HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
            HT  I     ++ FG+G  G LG G +    VP+E+ TL       A CG   T  + E 
Sbjct: 3596 HTICI-GENVVWAFGEGEGGKLGIGSKKDIYVPQEIITLNGKNIKKAYCGNGFTMFLSED 3654

Query: 474  AGKTS-GSNGLSS------------KKLF---------------------------TWGD 493
                S GS+ L              +K+F                            WG+
Sbjct: 3655 GELYSCGSDNLQDATDVLYTEKLIPEKIFEFQGQIVTDVATGPDHVLVLTARGHVWAWGN 3714

Query: 494  GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS 553
              EG LG G   P   P+ +++  D +  ++A   +   A TA  + FS  S +      
Sbjct: 3715 NCEGILGFGHDLPVQKPMIIQILSDKNIKQIATSRTHCAAWTA--EPFSRDSTNISHNDL 3772

Query: 554  PGS 556
            P S
Sbjct: 3773 PTS 3775



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 83/161 (51%), Gaps = 9/161 (5%)

Query: 492  GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI-----TIALTATGQVFSMGSA 546
            G+G  G+LGHG ++   +P    +S    F       SI     ++ALT TG+VFS G  
Sbjct: 3451 GEGNYGRLGHGHSDS--LPNLTMISALQGFVITQVSTSIGSDGHSLALTETGEVFSWGDG 3508

Query: 547  DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            D+G+LG   +  +   ++  ++    +  +ACG  H AV+S   EVY +G   +G+LG G
Sbjct: 3509 DFGKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLSQDGEVYVFGSAEHGKLGLG 3568

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             + NK+ PT +       +K + CG N T  IC+ + V  A
Sbjct: 3569 GHINKKRPTKIVHKGFLNIKYIACGQNHT--ICIGENVVWA 3607


>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
 gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
          Length = 1052

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 174/367 (47%), Gaps = 28/367 (7%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           ++ WG+   +G LG  + G+E         LLP  +E       Q IACG +H + +T  
Sbjct: 3   LYCWGDA-SHGQLG--LGGIE-----NEQILLPSQIEFKPDSPVQQIACGHRHTLFLTAN 54

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           GQ+++ G     +LGH  E     P  I  L    +  +ACG  H+ A+T  G + +WGD
Sbjct: 55  GQVYACGNNDHHQLGH--ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGD 112

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++ G +G  ++       K+   +    +  I CG  H+ A+TS G+L+++G   +G 
Sbjct: 113 --NDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQ 170

Query: 435 LG---HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           LG     D   ++ P  + T+  +     +CG  H+  I +            S  +F W
Sbjct: 171 LGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISK------------SSAVFGW 218

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           G    GQLG  D + R  P  +K    +    V CG   ++ LT  G VF+ G+ +YGQL
Sbjct: 219 GKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQL 278

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           G   S  +   R+   +    I  +ACG+ H +A+V S   VY++G GA+GQLG  +  +
Sbjct: 279 GHGASNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTIS 338

Query: 611 KQTPTLV 617
           +  P +V
Sbjct: 339 QTLPKVV 345



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 156/333 (46%), Gaps = 31/333 (9%)

Query: 317 IFSWGEGSGGKLGHG-VEAD-VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           ++ WG+ S G+LG G +E + +  P  I+    S +  +ACG  HT  +T +G +Y  G+
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQ---ISSICCGPWHTAAITSAGKLFTFGDGT 431
             H+        ++ H +P K    +  LQ   +  I CG  H+ A+T  G++ ++GD  
Sbjct: 63  NDHH--------QLGHELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDND 114

Query: 432 FGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            G +GH  D     +P+ +  L     V  +CG  H+ A+             S  +L++
Sbjct: 115 CGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALT------------SCGELYS 162

Query: 491 WGDGAEGQLG---HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           WG    GQLG     D      PL +     I    +ACG + +  ++ +  VF  G   
Sbjct: 163 WGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNT 222

Query: 548 YGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            GQLG      + +P++++ +++   +  + CG  +   ++++  V+T G G  GQLGHG
Sbjct: 223 CGQLGLNDEQNRAYPSQLK-SMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHG 281

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            + N+  P +V  L    +  V CG+  T A+ 
Sbjct: 282 ASNNEMIPRMVIELMGSTITQVACGNRHTLALV 314



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 136/281 (48%), Gaps = 21/281 (7%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           LY WGD  H    LG +      +P ++  + +   +  I CG  HT  +T+ G+++  G
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDS-PVQQIACGHRHTLFLTANGQVYACG 61

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           +     LGH     T  P  +  L+    +  +CG  H+ A+ E              ++
Sbjct: 62  NNDHHQLGH--ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWG------------QI 107

Query: 489 FTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
            +WGD   GQ+GH  D +   +P  ++     +  ++ACG++ ++ALT+ G+++S GS  
Sbjct: 108 LSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNI 167

Query: 548 YGQLG--SPGST--GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           YGQLG  SP        P R+   I    +  IACG  H  ++S  S V+ WGK   GQL
Sbjct: 168 YGQLGVQSPKDLPHSNAPLRLT-TILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQL 226

Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           G  D +N+  P+ ++++R   V+ V CG  ++  +    GV
Sbjct: 227 GLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGV 267



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 68/120 (56%), Gaps = 3/120 (2%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
           D ++   P  L+S   L  + + CG +++V +T +G +F+ G G+ G+LGHG   +   P
Sbjct: 230 DEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGASNNEMIP 289

Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLS-GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
           +++  L GS I  VACG  HT A+  S G +Y++G G    G LG  + IS  +P+ V G
Sbjct: 290 RMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGAS--GQLGTRNTISQTLPKVVIG 347


>gi|290987325|ref|XP_002676373.1| RhoGEF domain-containing protein [Naegleria gruberi]
 gi|284089975|gb|EFC43629.1| RhoGEF domain-containing protein [Naegleria gruberi]
          Length = 1196

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 150/295 (50%), Gaps = 32/295 (10%)

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            G  +T+G G  G+LGHG++     P  ++    L   M +C              ++G+ 
Sbjct: 928  GDAYTWGQGASGSLGHGNQEDKKEPLVMKDFLYLDVSMVACE------------NSAGAA 975

Query: 482  GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT-ATGQV 540
             + + +LFTWG G +G+LGH            +   ++   ++A G + +  +T   G V
Sbjct: 976  VMFTGELFTWGKGEKGRLGH------------ETFRNMPVKQIAAGSAHSGCITEGDGAV 1023

Query: 541  FSMGSADYGQLGSPGSTGKF-PTRIE-GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +  GS  YGQ+G+  +T    P R++ G +K +    + CG  H+ V+     VY WG G
Sbjct: 1024 YMWGSGIYGQIGNNTNTHALTPMRVKFGKLKAK---QLVCGVNHVLVLMEDGSVYGWGAG 1080

Query: 599  ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQ 658
              G+LG+G+  +++ P  +    DK V+ +  G + +AA+C H+ V   D   C  C+++
Sbjct: 1081 TYGRLGNGNESDQRVPVRINFFDDKNVRGLGAGGSSSAAVCAHQWVPDKDADDCMSCKSK 1140

Query: 659  FNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSES 713
            F F RRRH+C  CG ++C  C+ K+   T L    ++P RVCD+C+  L   +++
Sbjct: 1141 FTFLRRRHHCRYCGGIFCGSCTGKRI--TLLRFGFDEPVRVCDNCYQILTNAAQT 1193



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 164/394 (41%), Gaps = 91/394 (23%)

Query: 15   EQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQ-----LKLSHVSRI 69
            E+ +R +K G+ +LKY R GKP F  F LSSDE  L+W  G   KQ     + L+ V +I
Sbjct: 773  EECIRRMKAGSTMLKYCRTGKPHFRRFVLSSDETELMW--GSPNKQSNESIVSLTDVKKI 830

Query: 70   IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDNRCKS 129
              GQ TA+FQ+Y  P+ E  SFSL+YR+R+LD++CKDK E   W   +  L+S       
Sbjct: 831  CYGQNTAIFQKYKNPDLEGLSFSLLYRDRTLDIVCKDKQEYHTWVQGITYLLSH------ 884

Query: 130  RSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAY--ENSPQNRLGKAFSE 187
              DSI           N P                   PI + +  EN  Q      F E
Sbjct: 885  -LDSILKKKTVVPVVGNEPKFA----------------PITIVHDMENEKQ-----KFKE 922

Query: 188  VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSC-- 245
               F     AYT  +  S SL     G  +D        D   + +S     +S G+   
Sbjct: 923  --QFERIGDAYTWGQGASGSL---GHGNQEDKKEPLVMKDFLYLDVSMVACENSAGAAVM 977

Query: 246  -----------------HEDF-------------------DGLGDVFIWGEGLGNGLLGG 269
                             HE F                   +G G V++WG G+  G +G 
Sbjct: 978  FTGELFTWGKGEKGRLGHETFRNMPVKQIAAGSAHSGCITEGDGAVYMWGSGI-YGQIGN 1036

Query: 270  AVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG 329
              N           AL P  ++    L A+ + CG  H +++ + G ++ WG G+ G+LG
Sbjct: 1037 NTNT---------HALTPMRVKFG-KLKAKQLVCGVNHVLVLMEDGSVYGWGAGTYGRLG 1086

Query: 330  HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAV 363
            +G E+D   P  I+  +  N+  +  G   + AV
Sbjct: 1087 NGNESDQRVPVRINFFDDKNVRGLGAGGSSSAAV 1120



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 27/204 (13%)

Query: 247  EDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSK 306
            E F+ +GD + WG+G  +G LG           ++ D   P V++  + LD   +AC + 
Sbjct: 922  EQFERIGDAYTWGQG-ASGSLG---------HGNQEDKKEPLVMKDFLYLDVSMVACENS 971

Query: 307  HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT-CAVTL 365
                V   G++F+WG+G  G+LGH            +      +  +A G  H+ C    
Sbjct: 972  AGAAVMFTGELFTWGKGEKGRLGH------------ETFRNMPVKQIAAGSAHSGCITEG 1019

Query: 366  SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
             G +Y WG GI+  G +G  +      P +V  +   L+   + CG  H   +   G ++
Sbjct: 1020 DGAVYMWGSGIY--GQIGNNTNTHALTPMRV--KFGKLKAKQLVCGVNHVLVLMEDGSVY 1075

Query: 426  TFGDGTFGALGHGDRSSTSVPREV 449
             +G GT+G LG+G+ S   VP  +
Sbjct: 1076 GWGAGTYGRLGNGNESDQRVPVRI 1099


>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
           porcellus]
          Length = 1050

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 163/324 (50%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE
Sbjct: 36  VKEVACGGDHCVFLLEDGEVYTCGLNTKGQLGH--EREGNQPEQIGALADQHIIHVACGE 93

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  
Sbjct: 94  SHSLALSDQGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+ + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+     
Sbjct: 151 ALATDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFAL----- 205

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             SG+       +F WG    GQLG  D + R  P  VK+        ++CG   T  LT
Sbjct: 206 SLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
            +G VF+ G+   GQLG      +   R    +    +  IACG  H +A V S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G GA GQLG G   N + P+ V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 162/336 (48%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G G  +   V+ P+    ++  ++  VACG  H   +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGIGTHLRGIVAEPQACGFVSDRSVKEVACGGDHCVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -LNTKGQLGHEREGNQ--PEQI-GALADQHIIHVACGESHSLALSDQGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------TDGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 127/251 (50%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 TDGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG  ++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA GQLG G
Sbjct: 320 GCGARGQLGTG 330



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG---LGKEFPSQTS-----PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 267 GAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 35/165 (21%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGV 274
           G+  A   +  A SF +SLS                  G VF WG            N  
Sbjct: 189 GIPLAQVAAGGAHSFALSLS------------------GAVFGWGMN----------NAG 220

Query: 275 EISSADRRDALLP---KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG 331
           ++  +D +D   P   K+L +  V+    I+CG +H  ++TK G +F++G GS G+LGH 
Sbjct: 221 QLGLSDEKDRESPCHVKLLRTQKVV---YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 332 VEADVSYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDG 375
              D   P+ +  L GS +  +ACG  HT A V  SG +Y +G G
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322


>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
 gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
 gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
          Length = 1050

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 164/324 (50%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+ + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+     
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             SG+       +F WG    GQLG  D + R  P  VK+        ++CG   T  LT
Sbjct: 206 SLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
            +G VF+ G+   GQLG      +   R    +    +  IACG  H +A V S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G GA GQLG G   N + P+ V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  ++  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -LNTKGQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 127/251 (50%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG  ++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA GQLG G
Sbjct: 320 GCGARGQLGTG 330



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG---LGKEFPSQAS-----PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 267 GAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
 gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Pan paniscus]
 gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Gorilla gorilla gorilla]
 gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           3
 gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
 gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
 gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
 gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
 gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
 gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
          Length = 1050

 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 164/324 (50%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+ + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+     
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             SG+       +F WG    GQLG  D + R  P  VK+        ++CG   T  LT
Sbjct: 206 SLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
            +G VF+ G+   GQLG      +   R    +    +  IACG  H +A V S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G GA GQLG G   N + P+ V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  ++  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -LNTKGQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 127/251 (50%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG  ++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA GQLG G
Sbjct: 320 GCGARGQLGTG 330



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG---LGKEFPSQAS-----PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 267 GAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 35/165 (21%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGV 274
           G+  A   +  A SF +SLS                  G VF WG            N  
Sbjct: 189 GIPLAQVAAGGAHSFALSLS------------------GAVFGWGMN----------NAG 220

Query: 275 EISSADRRDALLP---KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG 331
           ++  +D +D   P   K+L +  V+    I+CG +H  ++TK G +F++G GS G+LGH 
Sbjct: 221 QLGLSDEKDRESPCHVKLLRTQKVV---YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 332 VEADVSYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDG 375
              D   P+ +  L GS +  +ACG  HT A V  SG +Y +G G
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322


>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Papio anubis]
          Length = 1050

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 164/324 (50%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+ + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+     
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             SG+       +F WG    GQLG  D + R  P  VK+        ++CG   T  LT
Sbjct: 206 SLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
            +G VF+ G+   GQLG      +   R    +    +  IACG  H +A V S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G GA GQLG G   N + P+ V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  ++  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -LNTKGQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 127/251 (50%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG  ++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA GQLG G
Sbjct: 320 GCGARGQLGTG 330



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG---LGKEFPSQAS-----PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 267 GAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
           [Nomascus leucogenys]
          Length = 1050

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 164/324 (50%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+ + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+     
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             SG+       +F WG    GQLG  D + R  P  VK+        ++CG   T  LT
Sbjct: 206 SLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
            +G VF+ G+   GQLG      +   R    +    +  IACG  H +A V S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G GA GQLG G   N + P+ V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  ++  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -LNTKGQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 127/251 (50%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG  ++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA GQLG G
Sbjct: 320 GCGARGQLGTG 330



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG---LGKEFPSQAS-----PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 267 GAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Callithrix jacchus]
          Length = 1050

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 164/324 (50%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+ + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+     
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             SG+       +F WG    GQLG  D + R  P  VK+        ++CG   T  LT
Sbjct: 206 SLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
            +G VF+ G+   GQLG      +   R    +    +  IACG  H +A V S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G GA GQLG G   N + P+ V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  ++  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -LNTKGQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 127/251 (50%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG  ++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA GQLG G
Sbjct: 320 GCGARGQLGTG 330



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG---LGKEFPSQAS-----PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 267 GAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 35/165 (21%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGV 274
           G+  A   +  A SF +SLS                  G VF WG            N  
Sbjct: 189 GIPLAQVAAGGAHSFALSLS------------------GAVFGWGMN----------NAG 220

Query: 275 EISSADRRDALLP---KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG 331
           ++  +D +D   P   K+L +  V+    I+CG +H  ++TK G +F++G GS G+LGH 
Sbjct: 221 QLGLSDEKDRESPCHVKLLRTQKVV---YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 332 VEADVSYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDG 375
              D   P+ +  L GS +  +ACG  HT A V  SG +Y +G G
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322


>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
 gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
          Length = 1057

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 174/368 (47%), Gaps = 28/368 (7%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +++ WG    +G LG  + G+E         L P  +  T     Q +ACG +H + +T 
Sbjct: 6   ELYCWGST-SHGQLG--LGGIE-----DEQILTPSQIPWTPDTAVQQVACGHRHTLFLTA 57

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G++++ G     +LGH  E     P LI  L    +  ++CG  H+ A++  G + +WG
Sbjct: 58  NGKVYACGSNDHSQLGH--ELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWG 115

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
           D  ++ G LG  ++       KV  Q+    +  I CG  H+ A+TS G+L+++G   +G
Sbjct: 116 D--NDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYG 173

Query: 434 ALGHG---DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            LG     D +  + P  + TL  +     +CG  H+  I +            S  +F 
Sbjct: 174 QLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK------------SGAVFG 221

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG    GQLG  D   R  P  +K    +    VACG   ++ LT  G VF+ G+  YGQ
Sbjct: 222 WGRNNCGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG   S+ +   R+   +    I  +ACG+ H +A+V S+  VY +G G++GQLG    +
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 341

Query: 610 NKQTPTLV 617
           +   P +V
Sbjct: 342 SLMLPQVV 349



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 157/338 (46%), Gaps = 31/338 (9%)

Query: 316 QIFSWGEGSGGKLGHGVEAD--VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           +++ WG  S G+LG G   D  +  P  I     + +  VACG  HT  +T +G +Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACG 65

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ---ISSICCGPWHTAAITSAGKLFTFGDG 430
              H        S++ H +P K    +  LQ   +  I CG  H+ A++  G++ ++GD 
Sbjct: 66  SNDH--------SQLGHELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDN 117

Query: 431 TFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
             G LGH  D+    +P+ V  L     V  +CG  H+ A+             S  +L+
Sbjct: 118 DCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALT------------SCGELY 165

Query: 490 TWGDGAEGQLGHGDAEPRV---VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           +WG    GQLG    +       PL +     I    +ACG + +  ++ +G VF  G  
Sbjct: 166 SWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225

Query: 547 DYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           + GQLG      + +PT+++  ++   +  +ACG      ++++  V+T G GA GQLGH
Sbjct: 226 NCGQLGLNDEANRAYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
           G + N+  P +V  L    +  V CG+  T A+   +G
Sbjct: 285 GFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRG 322



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 133/282 (47%), Gaps = 21/282 (7%)

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           +LY WG   H    LG + +     P ++    +   +  + CG  HT  +T+ GK++  
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDT-AVQQVACGHRHTLFLTANGKVYAC 64

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           G      LGH     T  P  +  L++   +  SCG  H+ A+ E              +
Sbjct: 65  GSNDHSQLGH--ELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWG------------Q 110

Query: 488 LFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           + +WGD   GQLGH  D E   +P  V+     +  ++ACG++ ++ALT+ G+++S GS 
Sbjct: 111 VLSWGDNDCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSN 170

Query: 547 DYGQLG--SPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
            YGQLG  SP       +P R+   +    +  IACG  H  ++S    V+ WG+   GQ
Sbjct: 171 IYGQLGVNSPKDLTHCNYPLRLT-TLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           LG  D  N+  PT ++ LR   V+ V CG  F+  +    GV
Sbjct: 230 LGLNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 271



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 86/158 (54%), Gaps = 5/158 (3%)

Query: 484 SSKKLFTWGDGAEGQLGHG--DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
           S K+L+ WG  + GQLG G  + E  + P  +  + D +  +VACGH  T+ LTA G+V+
Sbjct: 3   SGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVY 62

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           + GS D+ QLG    T K P  I   ++   +  I+CGS H   +S   +V +WG    G
Sbjct: 63  ACGSNDHSQLGHELPT-KRPLLIP-ELQDYVVIQISCGSRHSLALSEWGQVLSWGDNDCG 120

Query: 602 QLGHG-DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           QLGH  D E  Q P +V  L  K V  + CG+N + A+
Sbjct: 121 QLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLAL 158



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 11/198 (5%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+++ WG  +  G LG  VN    S  D      P  L + + +   +IACG  H+ L++
Sbjct: 162 GELYSWGSNI-YGQLG--VN----SPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS 214

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K G +F WG  + G+LG   EA+ +YP  +  L    +  VACG+  +  +T  G ++T 
Sbjct: 215 KSGAVFGWGRNNCGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTC 274

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGT 431
           G G +  G LG     +  +PR V  ++ G  I+ + CG  HT A+  S G+++ FG G+
Sbjct: 275 GAGAY--GQLGHGFSSNEMLPRMVM-ELMGSTITQVACGNRHTLALVPSRGRVYAFGLGS 331

Query: 432 FGALGHGDRSSTSVPREV 449
            G LG     S  +P+ V
Sbjct: 332 SGQLGTRSTKSLMLPQVV 349



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 13/147 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG            N  ++   D  +   P  L++   L  + +ACG + +V +T
Sbjct: 217 GAVFGWGRN----------NCGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLT 266

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS-GDLYT 371
            +G +F+ G G+ G+LGHG  ++   P+++  L GS I  VACG  HT A+  S G +Y 
Sbjct: 267 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYA 326

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSG 398
           +G G  + G LG  S  S  +P+ V G
Sbjct: 327 FGLG--SSGQLGTRSTKSLMLPQVVIG 351


>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
           boliviensis boliviensis]
          Length = 1050

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 164/324 (50%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+ + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+     
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             SG+       +F WG    GQLG  D + R  P  VK+        ++CG   T  LT
Sbjct: 206 SLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
            +G VF+ G+   GQLG      +   R    +    +  IACG  H +A V S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G GA GQLG G   N + P+ V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 163/336 (48%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++   +  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTSLQGIVAEPQVCGFISDRTVKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -LNTKGQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 127/251 (50%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG  ++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA GQLG G
Sbjct: 320 GCGARGQLGTG 330



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG---LGKEFPSQAS-----PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 267 GAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342



 Score = 62.8 bits (151), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 35/165 (21%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGV 274
           G+  A   +  A SF +SLS                  G VF WG            N  
Sbjct: 189 GIPLAQVAAGGAHSFALSLS------------------GAVFGWGMN----------NAG 220

Query: 275 EISSADRRDALLP---KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG 331
           ++  +D +D   P   K+L +  V+    I+CG +H  ++TK G +F++G GS G+LGH 
Sbjct: 221 QLGLSDEKDRESPCHVKLLRTQKVV---YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 332 VEADVSYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDG 375
              D   P+ +  L GS +  +ACG  HT A V  SG +Y +G G
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322


>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
          Length = 1050

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 163/324 (50%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGANTKGQLGH--EREGNKPEQIGALADQHIVHVACGE 93

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  
Sbjct: 94  SHSLALSDQGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+ + G+ FT+G  + G LG G +  S + P+ V +L+ +       G  H+ A+     
Sbjct: 151 ALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFAL----- 205

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             SG+       +F WG    GQLG  D + R  P  VK+        ++CG   T  LT
Sbjct: 206 SLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
            +G VF+ G+   GQLG      +   R    +    +  IACG  H +A V S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G GA GQLG G   N + P+ V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 161/336 (47%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  ++  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISPNLQGVVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGA 60

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
                G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 61  NTK--GQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGR 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +V  G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 125/251 (49%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG  S G+LG G E    + P+ + +L G  +  V  G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG  ++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA GQLG G
Sbjct: 320 GCGARGQLGTG 330



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 93/199 (46%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG    +G LG    G E  S        P+ + S   +    +  G  H+  ++
Sbjct: 156 GQFFTWGRN-SHGQLG---LGKEFPSQAS-----PQRVRSLEGIPLAQVVAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 267 GAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|118345495|ref|XP_976578.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89287995|gb|EAR85983.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 722

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 177/385 (45%), Gaps = 44/385 (11%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDAL-LPKVLESTVVLDAQSIACGSKHAV-LV 311
           +V+ WG  LG  L        +I  AD  + + +P  +         +I+ G+ H+    
Sbjct: 48  EVYAWGCNLGRKLGLSDEYYNQIFQADIPEQIKIPVKVTELSNKKINNISTGTNHSFAWS 107

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN-----IHMVACGEFHTCAVTLS 366
           T+  Q++ WG G  GKLG+    D+ YP++ + L         I  ++CGE HT AV   
Sbjct: 108 TELNQVYCWGIGEYGKLGNKESKDLQYPEIFNGLKQPEGIQWEISEISCGENHTVAVIKQ 167

Query: 367 ---------GDLYTWGD------GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCG 411
                      LY WG       GI + G    V++     P    G +E ++     C 
Sbjct: 168 INVNNSQSQNKLYVWGSSSDWQLGI-DTGKTDYVNQPLEMSPDYWEGNVESVK----ACS 222

Query: 412 PWHTAAITSAGKLFTFGDGTFGALGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
            + T AI   G++F++G G F  LG+  +  +   P ++E+L + + +  S G +H+AAI
Sbjct: 223 DF-TIAIDKQGRIFSWGKGGFNRLGYKAEIVNQKHPLQIESLSKQQIIQFSLGSFHSAAI 281

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
                    +NG    +L+TWG  + GQLGHG A+  + P  V+   +     VACG   
Sbjct: 282 T--------NNG----RLYTWGRDSNGQLGHGQAKADIFPKEVQALQNTYIVSVACGEGH 329

Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSS 588
           T+AL+   ++FS G    GQLG      K   P +I    + + I+ IACGS H  V+  
Sbjct: 330 TLALSKNNELFSWGLNSSGQLGRASENLKSSDPKKISF-FEDKSIKQIACGSKHSLVLLQ 388

Query: 589 KSEVYTWGKGANGQLGHGDNENKQT 613
              VY+WG    GQLG   + N Q 
Sbjct: 389 DGTVYSWGSNQYGQLGFDQDSNAQN 413



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 157/325 (48%), Gaps = 31/325 (9%)

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG----------DGIHNLGLLGQV 385
           V  P LI  +  SNI  + CG  H+ A+  + ++Y WG          D  +N      +
Sbjct: 18  VQTPHLISDI--SNIVKIVCGANHSYAIDTNFEVYAWGCNLGRKLGLSDEYYNQIFQADI 75

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAI-TSAGKLFTFGDGTFGALGHGDRSSTS 444
            E    IP KV+ ++   +I++I  G  H+ A  T   +++ +G G +G LG+ +     
Sbjct: 76  PEQIK-IPVKVT-ELSNKKINNISTGTNHSFAWSTELNQVYCWGIGEYGKLGNKESKDLQ 133

Query: 445 VPREVETLKELKTVM-----ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQL 499
            P     LK+ + +       SCG  HT A+++   + + +N  S  KL+ WG  ++ QL
Sbjct: 134 YPEIFNGLKQPEGIQWEISEISCGENHTVAVIK---QINVNNSQSQNKLYVWGSSSDWQL 190

Query: 500 GHGDAEPRVVPLCVKVSDDISFCKV----ACGHSITIALTATGQVFSMGSADYGQLGSPG 555
           G    +   V   +++S D     V    AC    TIA+   G++FS G   + +LG   
Sbjct: 191 GIDTGKTDYVNQPLEMSPDYWEGNVESVKACS-DFTIAIDKQGRIFSWGKGGFNRLGYKA 249

Query: 556 S--TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQT 613
                K P +IE   K + I+  + GS+H A +++   +YTWG+ +NGQLGHG  +    
Sbjct: 250 EIVNQKHPLQIESLSKQQIIQ-FSLGSFHSAAITNNGRLYTWGRDSNGQLGHGQAKADIF 308

Query: 614 PTLVEALRDKQVKSVVCGSNFTAAI 638
           P  V+AL++  + SV CG   T A+
Sbjct: 309 PKEVQALQNTYIVSVACGEGHTLAL 333



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 168/388 (43%), Gaps = 49/388 (12%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-------ADV----SYPKLIDALNGSN 349
           I CG+ H+  +    ++++WG   G KLG   E       AD+      P  +  L+   
Sbjct: 33  IVCGANHSYAIDTNFEVYAWGCNLGRKLGLSDEYYNQIFQADIPEQIKIPVKVTELSNKK 92

Query: 350 IHMVACGEFHTCA-VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG--QMEGLQ-- 404
           I+ ++ G  H+ A  T    +Y WG G +  G LG         P   +G  Q EG+Q  
Sbjct: 93  INNISTGTNHSFAWSTELNQVYCWGIGEY--GKLGNKESKDLQYPEIFNGLKQPEGIQWE 150

Query: 405 ISSICCGPWHTAAIT---------SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
           IS I CG  HT A+          S  KL+ +G  +   LG     +  V + +E     
Sbjct: 151 ISEISCGENHTVAVIKQINVNNSQSQNKLYVWGSSSDWQLGIDTGKTDYVNQPLE----- 205

Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGH-GDAEPRVVPLCV 513
                S   W    +  V   +  +  +  + ++F+WG G   +LG+  +   +  PL +
Sbjct: 206 ----MSPDYWE-GNVESVKACSDFTIAIDKQGRIFSWGKGGFNRLGYKAEIVNQKHPLQI 260

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRY 572
           +        + + G   + A+T  G++++ G    GQLG   +    FP  ++  +++ Y
Sbjct: 261 ESLSKQQIIQFSLGSFHSAAITNNGRLYTWGRDSNGQLGHGQAKADIFPKEVQA-LQNTY 319

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG-DNENKQTPTLVEALRDKQVKSVVCG 631
           I  +ACG  H   +S  +E+++WG  ++GQLG   +N     P  +    DK +K + CG
Sbjct: 320 IVSVACGEGHTLALSKNNELFSWGLNSSGQLGRASENLKSSDPKKISFFEDKSIKQIACG 379

Query: 632 SNFTAAICLHKGVSIADHSICSGCRNQF 659
           S        H  V + D ++ S   NQ+
Sbjct: 380 SK-------HSLVLLQDGTVYSWGSNQY 400



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 103/190 (54%), Gaps = 15/190 (7%)

Query: 249 FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            D  G +F WG+G  N L      G +    +++  L  + L    ++     + GS H+
Sbjct: 228 IDKQGRIFSWGKGGFNRL------GYKAEIVNQKHPLQIESLSKQQII---QFSLGSFHS 278

Query: 309 VLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
             +T  G++++WG  S G+LGHG  +AD+ +PK + AL  + I  VACGE HT A++ + 
Sbjct: 279 AAITNNGRLYTWGRDSNGQLGHGQAKADI-FPKEVQALQNTYIVSVACGEGHTLALSKNN 337

Query: 368 DLYTWGDGIHNLGLLGQVSE-ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
           +L++W  G+++ G LG+ SE +    P+K+S   E   I  I CG  H+  +   G +++
Sbjct: 338 ELFSW--GLNSSGQLGRASENLKSSDPKKISF-FEDKSIKQIACGSKHSLVLLQDGTVYS 394

Query: 427 FGDGTFGALG 436
           +G   +G LG
Sbjct: 395 WGSNQYGQLG 404


>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
           africana]
          Length = 1050

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 163/324 (50%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIVHVACGE 93

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I  + CG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+ + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+     
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFAL----- 205

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             SG+       +F WG    GQLG  D + R  P  VK+        ++CG   T  LT
Sbjct: 206 SLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
             G VF+ G+   GQLG      +   R    +    +  IACG  H +A V S   +Y 
Sbjct: 259 KNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G GA GQLG G   N + P+ V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 163/336 (48%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  ++  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -LNTKGQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +V  G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 125/251 (49%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  V  G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVTAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG  ++N G LG   E     P  V   +   ++  I CG  HTA +T  G +FTFG G+
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA GQLG G
Sbjct: 320 GCGARGQLGTG 330



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +  G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG---LGKEFPSQAS-----PQRVRSLEGIPLAQVTAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T +G ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 267 GAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 35/165 (21%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGV 274
           G+  A   +  A SF +SLS                  G VF WG            N  
Sbjct: 189 GIPLAQVTAGGAHSFALSLS------------------GAVFGWGMN----------NAG 220

Query: 275 EISSADRRDALLP---KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG 331
           ++  +D +D   P   K+L +  V+    I+CG +H  ++TK G +F++G GS G+LGH 
Sbjct: 221 QLGLSDEKDRESPCHVKLLRTQKVV---YISCGEEHTAVLTKNGGVFTFGAGSCGQLGHD 277

Query: 332 VEADVSYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDG 375
              D   P+ +  L GS +  +ACG  HT A V  SG +Y +G G
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322


>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
 gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
          Length = 1187

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 153/312 (49%), Gaps = 15/312 (4%)

Query: 336 VSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           VS P L++++   +I  VA   G  H  A++  G++++WG+     G LG  +  S   P
Sbjct: 375 VSSPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEA--EDGKLGHGNRNSCDRP 432

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           R +   + G ++  I  G  H+A ITS G+LFT+G G +G LGHGD      P+ VE LK
Sbjct: 433 RVIE-SLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEALK 491

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            ++ +  +CG          +G            +++WGDG  G+LG G ++   +P  V
Sbjct: 492 GVRVIDVACG----------SGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKV 541

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           +        KV CG   ++ALT +G V++ G  DY +LG          R    ++ + +
Sbjct: 542 EALIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKNV 601

Query: 574 EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSN 633
             IA GS H    + + EV+TWG    GQLG G       P LV AL+ K++  V CGS 
Sbjct: 602 ISIATGSLHCVACTDQGEVFTWGDNDEGQLGDGSTSAIPRPRLVAALQGKKINRVACGSA 661

Query: 634 FTAAICLHKGVS 645
            + A    K V+
Sbjct: 662 HSLAWSTSKPVN 673



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 152/311 (48%), Gaps = 21/311 (6%)

Query: 287 PKVLESTVVLDAQSIAC--GSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
           P +LES   +  + +A   G KH + ++ +G++FSWGE   GKLGHG       P++I++
Sbjct: 378 PTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIES 437

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           L G  +  +A G  H+  +T +G+L+TWG G +  G LG         P+ V   ++G++
Sbjct: 438 LRGKEVVDIAAGGAHSACITSTGELFTWGKGRY--GRLGHGDSEDQMKPKLVEA-LKGVR 494

Query: 405 ISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
           +  + CG     T  IT    ++++GDG +G LG G      +P++VE L     V   C
Sbjct: 495 VIDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQGVVKVEC 554

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
           G   + A+ +            S  ++TWG G   +LGHG  +    P  V      +  
Sbjct: 555 GSQFSVALTK------------SGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKNVI 602

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFP-TRIEGNIKHRYIEDIACGSY 581
            +A G    +A T  G+VF+ G  D GQLG  GST   P  R+   ++ + I  +ACGS 
Sbjct: 603 SIATGSLHCVACTDQGEVFTWGDNDEGQLGD-GSTSAIPRPRLVAALQGKKINRVACGSA 661

Query: 582 HIAVVSSKSEV 592
           H    S+   V
Sbjct: 662 HSLAWSTSKPV 672



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 146/320 (45%), Gaps = 42/320 (13%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+VF WGE     L  G  N     S DR     P+V+ES    +   IA G  H+  +T
Sbjct: 408 GEVFSWGEAEDGKLGHGNRN-----SCDR-----PRVIESLRGKEVVDIAAGGAHSACIT 457

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLY 370
             G++F+WG+G  G+LGHG   D   PKL++AL G  +  VAC  G+  T  +T    ++
Sbjct: 458 STGELFTWGKGRYGRLGHGDSEDQMKPKLVEALKGVRVIDVACGSGDAQTLCITDDDSVW 517

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG+       IP+KV   + G  +  + CG   + A+T +G ++T+G G
Sbjct: 518 SWGDG--DYGKLGRGGSDGCKIPQKVEALI-GQGVVKVECGSQFSVALTKSGCVYTWGKG 574

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            +  LGHG       PR+V  L+    +  + G  H  A  +              ++FT
Sbjct: 575 DYHRLGHGSDDHVRRPRKVAALQGKNVISIATGSLHCVACTD------------QGEVFT 622

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WGD  EGQLG G       P  V         +VACG + ++A + +             
Sbjct: 623 WGDNDEGQLGDGSTSAIPRPRLVAALQGKKINRVACGSAHSLAWSTS------------- 669

Query: 551 LGSPGSTGKFPTRIEGNIKH 570
              P + GK P ++     H
Sbjct: 670 --KPVNAGKLPVQVPMEYNH 687


>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
          Length = 1052

 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 153/333 (45%), Gaps = 18/333 (5%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+    T+V D   + CG  H +LV K G++FS+G    G+LGH      + P  +D L 
Sbjct: 25  PRASPFTLVDDIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP--VDGLE 82

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
             NI  VACG  HT A    G+++ WG   +  G LG   E S     K+   +   Q+ 
Sbjct: 83  AHNITQVACGAQHTLAQNEWGEVFAWGSNSN--GQLGLNVEESMMPTPKMVKSLATKQVV 140

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-PREVETLKELKTVMASCGVW 465
            I CG  H+ A+T+ G+++ +G  + G LG G   +    P  V+ L+ +     SCG  
Sbjct: 141 QIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGAD 200

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
            + A+              S  ++ WG  + GQLG GD   R  P  +K         + 
Sbjct: 201 FSFAVT------------PSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIR 248

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IA 584
           CG   T ALT  G VF+ G+  YGQLG   S  +   R    +    +  I CG  H +A
Sbjct: 249 CGMDHTAALTRDGGVFTFGAGMYGQLGHCTSANEMLPRKVLELMGTTVTQICCGRCHTLA 308

Query: 585 VVSSKSEVYTWGKGANGQLGHGDNENKQTPTLV 617
            V SK  +Y +G G +GQLG     N  +P LV
Sbjct: 309 FVPSKGRIYAFGLGGSGQLGTKSTANVNSPQLV 341



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 145/298 (48%), Gaps = 21/298 (7%)

Query: 349 NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSI 408
           +I  V CGE HT  V   G L+++G  +++ G LG     +   P  V G +E   I+ +
Sbjct: 35  DIVQVGCGENHTILVMKDGKLFSFG--LNDYGQLGHCRSRTRAEP--VDG-LEAHNITQV 89

Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALG-HGDRSSTSVPREVETLKELKTVMASCGVWHT 467
            CG  HT A    G++F +G  + G LG + + S    P+ V++L   + V  +CG  H+
Sbjct: 90  ACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQIACGRSHS 149

Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA-EPRVVPLCVKVSDDISFCKVAC 526
            A+  V             +++ WG  + GQLG G +  P   P  VK+   I    ++C
Sbjct: 150 MALTNVG------------EIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISC 197

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAV 585
           G   + A+T +G V+  G   +GQLG   +T +  PT+++ +++ + +  I CG  H A 
Sbjct: 198 GADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLK-SLRFQRVTYIRCGMDHTAA 256

Query: 586 VSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
           ++    V+T+G G  GQLGH  + N+  P  V  L    V  + CG   T A    KG
Sbjct: 257 LTRDGGVFTFGAGMYGQLGHCTSANEMLPRKVLELMGTTVTQICCGRCHTLAFVPSKG 314



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/243 (33%), Positives = 121/243 (49%), Gaps = 18/243 (7%)

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           I  + CG  HT  +   GKLF+FG   +G LGH    + + P  V+ L+       +CG 
Sbjct: 36  IVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP--VDGLEAHNITQVACGA 93

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCK 523
            HT A  E              ++F WG  + GQLG    E  +  P  VK        +
Sbjct: 94  QHTLAQNEWG------------EVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQVVQ 141

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTR--IEGNIKHRYIEDIACGSY 581
           +ACG S ++ALT  G+++  GS  +GQLG  GS+G   T+  +   ++   I  I+CG+ 
Sbjct: 142 IACGRSHSMALTNVGEIYCWGSNSHGQLGL-GSSGTPETKPCLVKLLQGIPISHISCGAD 200

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
               V+    VY WGK + GQLG GD  ++  PT +++LR ++V  + CG + TAA+   
Sbjct: 201 FSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRD 260

Query: 642 KGV 644
            GV
Sbjct: 261 GGV 263



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 122/253 (48%), Gaps = 32/253 (12%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+VF WG    NG LG  V    + +        PK+++S        IACG  H++ +T
Sbjct: 103 GEVFAWGSN-SNGQLGLNVEESMMPT--------PKMVKSLATKQVVQIACGRSHSMALT 153

Query: 313 KQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             G+I+ WG  S G+LG G      + P L+  L G  I  ++CG   + AVT SG +Y 
Sbjct: 154 NVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGADFSFAVTPSGAVYG 213

Query: 372 WG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ---ISSICCGPWHTAAITSAGKLFTF 427
           WG +    LGL G  ++      R    Q++ L+   ++ I CG  HTAA+T  G +FTF
Sbjct: 214 WGKNSFGQLGL-GDTTD------RPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTF 266

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           G G +G LGH   ++  +PR+V  L         CG  HT A V   G           +
Sbjct: 267 GAGMYGQLGHCTSANEMLPRKVLELMGTTVTQICCGRCHTLAFVPSKG-----------R 315

Query: 488 LFTWGDGAEGQLG 500
           ++ +G G  GQLG
Sbjct: 316 IYAFGLGGSGQLG 328



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 102/199 (51%), Gaps = 13/199 (6%)

Query: 252 LGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           +G+++ WG    +G LG   +G            L K+L+   +     I+CG+  +  V
Sbjct: 155 VGEIYCWGSN-SHGQLGLGSSG-----TPETKPCLVKLLQGIPI---SHISCGADFSFAV 205

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           T  G ++ WG+ S G+LG G   D   P  + +L    +  + CG  HT A+T  G ++T
Sbjct: 206 TPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFT 265

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDG 430
           +G G++  G LG  +  +  +PRKV  ++ G  ++ ICCG  HT A + S G+++ FG G
Sbjct: 266 FGAGMY--GQLGHCTSANEMLPRKVL-ELMGTTVTQICCGRCHTLAFVPSKGRIYAFGLG 322

Query: 431 TFGALGHGDRSSTSVPREV 449
             G LG    ++ + P+ V
Sbjct: 323 GSGQLGTKSTANVNSPQLV 341


>gi|303271437|ref|XP_003055080.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463054|gb|EEH60332.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1071

 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 179/412 (43%), Gaps = 90/412 (21%)

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN---------- 346
           D +SIA G++HAV  T+ G +++WG+G GG+LGHG   D + P  + A +          
Sbjct: 265 DPRSIALGTRHAVAATRAGGVYTWGDGVGGRLGHGDVVDRATPTRVRAADDVFDVKAGGG 324

Query: 347 --GSNIHMVACGEFHTCAVTLSGD----------LYTW--------------GDGIHNLG 380
             G    +V CG   T  +T   D          LY W              G    +  
Sbjct: 325 GDGGARAVVRCGGDRTVVLTRDRDDDGVEDGGGALYAWGGSGDDFGVGGGGGGSSAEDAA 384

Query: 381 LLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL----- 435
               +S I  W     S   E  +I+ +  G +H AA++  G LFT+G+G F AL     
Sbjct: 385 TRWTLSRI--WFSSSSSSSPEA-RITRVSVGMFHVAAVSVDGALFTWGEGAFHALGHGGG 441

Query: 436 ------GHGDRSSTS--VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
                 G   R  TS   PR VE L+       SCGVWHTAA+V+              +
Sbjct: 442 GGGGGGGGASRPPTSEPRPRRVEGLRGRVVADVSCGVWHTAAVVD------------DGQ 489

Query: 488 LFTWGDGAEGQLGHGDAEPRV-VPLCVKVSD------------------DISFCKVACGH 528
           L+TWGDG  G+LGH D    V VP   +V+D                   +     +CG 
Sbjct: 490 LYTWGDGDGGKLGHADVTDDVPVPTPRRVADWTPGGGGGGGGEEKNASEIVVIVAASCGQ 549

Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
           S T+AL A G  + +GS   G+ G+P      P RI  +I    +  ++ G  H A ++ 
Sbjct: 550 SHTLALDANGVAWCLGS--VGKTGAPPP--PTPRRI-ASIPD-AVASLSSGDSHAAALTR 603

Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVE-ALRDKQVKSVVCGSNFTAAIC 639
           +  +Y WG G  G LGHG    +  P L+E AL  + ++ V CG   TA + 
Sbjct: 604 RGRLYVWGVGKRGALGHGGFGEELAPRLLEGALEGRTIREVTCGPESTAVVV 655



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 78/184 (42%), Gaps = 23/184 (12%)

Query: 253 GDVFIWGEGLGNGLLGGA--VNGVEISSADRRDALLP----------KVLESTVVLDAQS 300
           G ++ WG+G G G LG A   + V + +  R     P          K     VV+ A S
Sbjct: 488 GQLYTWGDGDG-GKLGHADVTDDVPVPTPRRVADWTPGGGGGGGGEEKNASEIVVIVAAS 546

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
             CG  H + +   G   +W  GS GK G         P+ I ++  + +  ++ G+ H 
Sbjct: 547 --CGQSHTLALDANG--VAWCLGSVGKTG---APPPPTPRRIASIPDA-VASLSSGDSHA 598

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T  G LY WG G    G LG         PR + G +EG  I  + CGP  TA +  
Sbjct: 599 AALTRRGRLYVWGVG--KRGALGHGGFGEELAPRLLEGALEGRTIREVTCGPESTAVVVD 656

Query: 421 AGKL 424
           A  L
Sbjct: 657 AAAL 660


>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
          Length = 1413

 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 166/340 (48%), Gaps = 31/340 (9%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+CG +H  LVT+ G++F +G  + G+LG G +  V+ P  + AL    + + ACG  HT
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHT 100

Query: 361 CAVTLSGDLYT-WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
              T  G+LY   G+    LGL       S  +    + Q     I  +  G   +AA+T
Sbjct: 101 LVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQG---PIKMLAAGSNTSAALT 157

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G+L+ +GD + G +G G  S+   P+EV   K  +    SCG +H +A V V G    
Sbjct: 158 QDGRLYMWGDNSEGQIGLGKESNALTPQEVSVGK--RVFWVSCGYYH-SAFVTVDG---- 210

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
                   L+T+G+   G+LG      A  +V      + D +   +VACG   T+ALT 
Sbjct: 211 -------ALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRV--VQVACGGGHTVALTE 261

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH---RYIEDIACGSYHIAVVSSKSEVY 593
             +V+S G   +GQLG    T  F +R+   ++H     ++  ACG  H A+++    +Y
Sbjct: 262 N-EVYSFGLGQFGQLGH--GTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLY 318

Query: 594 TWGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCG 631
           T+G G +G+LG G+    N+  PTL     D  V SV CG
Sbjct: 319 TFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCG 358



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 5/121 (4%)

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGS 580
            +++CG   T  +T  G++F  GS ++GQLG    +T   PT ++  +K   ++  ACG 
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKA-LKSERVKLTACGR 97

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ--VKSVVCGSNFTAAI 638
            H  V +S+  +Y  G    GQLG GD  ++ +  LVE   +KQ  +K +  GSN +AA+
Sbjct: 98  THTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFF-NKQGPIKMLAAGSNTSAAL 156

Query: 639 C 639
            
Sbjct: 157 T 157



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 2/83 (2%)

Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE--ADVSYPK 340
           ++ LP+V+E       +  ACG  H  L+T  G ++++G+G  GKLG G E   +   P 
Sbjct: 283 ESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPT 342

Query: 341 LIDALNGSNIHMVACGEFHTCAV 363
           L       ++H V CG  H   +
Sbjct: 343 LCPRFLDYHVHSVTCGGCHMLVL 365


>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase, partial [Rhipicephalus pulchellus]
          Length = 1181

 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 156/329 (47%), Gaps = 25/329 (7%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL--IDALNGSNIHMVAC 355
            + +ACG KH +++   G ++S G    G+LG     D S  KL  + AL+   I  VAC
Sbjct: 93  VREVACGHKHTLVLLANGSVYSCGANDFGQLGQ----DRSMRKLEQVAALSAHEIRAVAC 148

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
           GE H+ A++ +G +++W  G +  G LG  +E    +  KV  ++  L I  I CG  H 
Sbjct: 149 GEAHSLALSDAGQVFSW--GCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHC 206

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTS---VPREVETLKELKTVMASCGVWHTAAIVE 472
            A+ + G+LF++G    G LG G R ST    +PR V  L  +   + +CG  H+  +  
Sbjct: 207 LALANNGELFSWGGNASGQLGLG-RDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLT- 264

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
                       S  +F WG  + GQLG  D   R+ P  +K         V CG + T 
Sbjct: 265 -----------PSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTA 313

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSE 591
           ALTA G VF+ G+  YGQLG      +   R    +    I  ++CG  H +A       
Sbjct: 314 ALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGR 373

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           +Y +G G +GQLG+G  E+   P  V  L
Sbjct: 374 LYIFGLGMSGQLGNGTLESSALPVTVPGL 402



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/264 (34%), Positives = 132/264 (50%), Gaps = 27/264 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG    NG LG           +    L PKV++    L    IACG+ H + + 
Sbjct: 160 GQVFSWGCN-RNGQLG--------CGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALA 210

Query: 313 KQGQIFSWGEGSGGKLGHGVEA--DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
             G++FSWG  + G+LG G ++  +   P+ +  L G  + +VACG  H+  +T SG ++
Sbjct: 211 NNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVF 270

Query: 371 TWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
            WG +    LGL  Q   +   + + +  Q    +I  +CCG  HTAA+T+ G +FTFG 
Sbjct: 271 VWGRNSCGQLGLSDQRDRLHPTVLKPLRSQ----RIKHVCCGENHTAALTADGGVFTFGA 326

Query: 430 GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
           GT+G LGHG + + +VPR V  L        SCG  HT A    +G           +L+
Sbjct: 327 GTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSG-----------RLY 375

Query: 490 TWGDGAEGQLGHGDAEPRVVPLCV 513
            +G G  GQLG+G  E   +P+ V
Sbjct: 376 IFGLGMSGQLGNGTLESSALPVTV 399



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 158/343 (46%), Gaps = 39/343 (11%)

Query: 317 IFSWGEGSGGKLG-----HGV--EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
           ++SWG G  G+LG      GV  E  VS P+ +       +  VACG  HT  +  +G +
Sbjct: 53  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 112

Query: 370 YTWGDGIHNLGLLGQVSEISHWIPRKVS--GQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           Y+ G   ++ G LGQ   +     RK+     +   +I ++ CG  H+ A++ AG++F++
Sbjct: 113 YSCG--ANDFGQLGQDRSM-----RKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSW 165

Query: 428 GDGTFGALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
           G    G LG G    + + P+ ++ L  L  V  +CG  H  A+         +NG    
Sbjct: 166 GCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLAL--------ANNG---- 213

Query: 487 KLFTWGDGAEGQLGHG------DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
           +LF+WG  A GQLG G      +  PR V   V V        VACG   ++ LT +G V
Sbjct: 214 ELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVP----LALVACGAMHSVGLTPSGTV 269

Query: 541 FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
           F  G    GQLG      +    +   ++ + I+ + CG  H A +++   V+T+G G  
Sbjct: 270 FVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTY 329

Query: 601 GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
           GQLGHG   N+  P  V  L    +  + CG   T A     G
Sbjct: 330 GQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSG 372



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 133/269 (49%), Gaps = 18/269 (6%)

Query: 290 LESTVVLDAQSI---ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDAL 345
           LE    L A  I   ACG  H++ ++  GQ+FSWG    G+LG G E +    PK+I  L
Sbjct: 132 LEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKL 191

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
              +I  +ACG  H  A+  +G+L++WG        LG+ S  +  +PR+VS  + G+ +
Sbjct: 192 ATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVS-HLVGVPL 250

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
           + + CG  H+  +T +G +F +G  + G LG  D+     P  ++ L+  +     CG  
Sbjct: 251 ALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGEN 310

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
           HTAA+    G            +FT+G G  GQLGHG      VP  V      +  +++
Sbjct: 311 HTAALTADGG------------VFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLS 358

Query: 526 CGHSITIALTA-TGQVFSMGSADYGQLGS 553
           CG   T+A    +G+++  G    GQLG+
Sbjct: 359 CGRCHTVAYAPQSGRLYIFGLGMSGQLGN 387



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 139/285 (48%), Gaps = 25/285 (8%)

Query: 369 LYTWGDGIH-NLGLL----GQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGK 423
           LY+WG G +  LGL     G  +E     P +V  +     +  + CG  HT  + + G 
Sbjct: 53  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVR-RFGTRAVREVACGHKHTLVLLANGS 111

Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
           +++ G   FG LG  DRS   +  +V  L   +    +CG  H+ A+ +           
Sbjct: 112 VYSCGANDFGQLGQ-DRSMRKL-EQVAALSAHEIRAVACGEAHSLALSDAG--------- 160

Query: 484 SSKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              ++F+WG    GQLG G + E R+ P  +K    +   ++ACG    +AL   G++FS
Sbjct: 161 ---QVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFS 217

Query: 543 MGSADYGQLG-SPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
            G    GQLG    STG  + P R+  ++    +  +ACG+ H   ++    V+ WG+ +
Sbjct: 218 WGGNASGQLGLGRDSTGNERLPRRV-SHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNS 276

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            GQLG  D  ++  PT+++ LR +++K V CG N TAA+    GV
Sbjct: 277 CGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGV 321



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 24/215 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++F WG G  +G LG   +    S+ + R   LP+ +   V +    +ACG+ H+V +T
Sbjct: 213 GELFSWG-GNASGQLGLGRD----STGNER---LPRRVSHLVGVPLALVACGAMHSVGLT 264

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  S G+LG   + D  +P ++  L    I  V CGE HT A+T  G ++T+
Sbjct: 265 PSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTF 324

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGT 431
           G G +  G LG   +++  +PR+V  ++ G  IS + CG  HT A    +G+L+ FG G 
Sbjct: 325 GAGTY--GQLGHGVKVNEAVPRRVV-ELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGM 381

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            G LG+G   S+++P  V             G+WH
Sbjct: 382 SGQLGNGTLESSALPVTVP------------GLWH 404


>gi|326913438|ref|XP_003203045.1| PREDICTED: hypothetical protein LOC100541592 [Meleagris gallopavo]
          Length = 1302

 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 168/340 (49%), Gaps = 31/340 (9%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+CG +H  +VT  G+++ +G    G+LG G +  V  P  + AL      +  CG  HT
Sbjct: 57  ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVHKPTCVKALKPEKTKLAVCGRNHT 116

Query: 361 CAVTLSGDLYTW-GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
              T +G++Y   G+G   LG LG   E + +    +S      +I  +  G + +AA+T
Sbjct: 117 LVYTENGNMYAAGGNGEGQLG-LGDTEERTTF--HLISFFTNQHKIKQLAAGSYTSAAVT 173

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G+LF +GD + G +G  D++  SVP +V+  K + ++  SCG +H+A I         
Sbjct: 174 EDGQLFVWGDNSEGQIGLADKTYVSVPCQVDVGKPISSI--SCGYYHSAFIT-------- 223

Query: 480 SNGLSSKKLFTWGDGAEGQLG---HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
                  +L+T+G+   G+LG         RV    + + + ++  KVACG   T+ LT 
Sbjct: 224 ----GDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVN--KVACGGEHTVVLTE 277

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY---IEDIACGSYHIAVVSSKSEVY 593
           TG V++ G   YGQLG    T  F T +  ++KH     I +I CG  H AV++    ++
Sbjct: 278 TG-VYTFGLGQYGQLGH--GTLLFKTSVPKSVKHLRKCKIRNITCGESHTAVIAENGLMF 334

Query: 594 TWGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCG 631
           T+G G +G+LG G+    N+  P L        V  V CG
Sbjct: 335 TFGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACG 374



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 91/244 (37%), Positives = 134/244 (54%), Gaps = 30/244 (12%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + +A GS  +  VT+ GQ+F WG+ S G++G   +  VS P  +D   G  I  ++CG +
Sbjct: 160 KQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTYVSVPCQVDV--GKPISSISCGYY 217

Query: 359 HTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           H+  +T  G+LYT+G+  +  LGLL +  + S  +P+ V G ME  +++ + CG  HT  
Sbjct: 218 HSAFITGDGELYTFGEPENGKLGLLPEQLKNSR-VPQPVLGIME--KVNKVACGGEHTVV 274

Query: 418 ITSAGKLFTFGDGTFGALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           +T  G ++TFG G +G LGHG     TSVP+ V+ L++ K    +CG  HTA I E    
Sbjct: 275 LTETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRKCKIRNITCGESHTAVIAE---- 329

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCK--VACG--HS 529
               NGL    +FT+GDG  G+LG G+   A      LC   S+ +SF    VACG  H 
Sbjct: 330 ----NGL----MFTFGDGRHGKLGLGEENFANQFDPALC---SNFLSFTVLLVACGGCHM 378

Query: 530 ITIA 533
           +  A
Sbjct: 379 LVFA 382



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 125/276 (45%), Gaps = 50/276 (18%)

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
           I CG  HTA +T  GKL+ FG   +G LG G +++   P  V+ LK  KT +A CG  HT
Sbjct: 57  ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVHKPTCVKALKPEKTKLAVCGRNHT 116

Query: 468 AAIVE------VAGKTSGSNGLSSK----------------------------------- 486
               E        G   G  GL                                      
Sbjct: 117 LVYTENGNMYAAGGNGEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDG 176

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           +LF WGD +EGQ+G  D     VP  V V   IS   ++CG+  +  +T  G++++ G  
Sbjct: 177 QLFVWGDNSEGQIGLADKTYVSVPCQVDVGKPIS--SISCGYYHSAFITGDGELYTFGEP 234

Query: 547 DYGQLG---SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           + G+LG         + P  + G ++   +  +ACG  H  VV +++ VYT+G G  GQL
Sbjct: 235 ENGKLGLLPEQLKNSRVPQPVLGIMEK--VNKVACGGEH-TVVLTETGVYTFGLGQYGQL 291

Query: 604 GHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAAI 638
           GHG    K + P  V+ LR  +++++ CG + TA I
Sbjct: 292 GHGTLLFKTSVPKSVKHLRKCKIRNITCGESHTAVI 327



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 38/237 (16%)

Query: 194 AAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISL------SSAVSSSSQGSCHE 247
           AA +YT A        FV     D++  +   AD   +S+         +SS S G  H 
Sbjct: 163 AAGSYTSAAVTEDGQLFVWG---DNSEGQIGLADKTYVSVPCQVDVGKPISSISCGYYHS 219

Query: 248 DF-DGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLEST--------VVLDA 298
            F  G G+++ +GE   NG LG                LLP+ L+++        ++   
Sbjct: 220 AFITGDGELYTFGEP-ENGKLG----------------LLPEQLKNSRVPQPVLGIMEKV 262

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGE 357
             +ACG +H V++T+ G ++++G G  G+LGHG +    S PK +  L    I  + CGE
Sbjct: 263 NKVACGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRKCKIRNITCGE 321

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            HT  +  +G ++T+GDG H    LG+ +  + + P   S  +    +  + CG  H
Sbjct: 322 SHTAVIAENGLMFTFGDGRHGKLGLGEENFANQFDPALCSNFL-SFTVLLVACGGCH 377


>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
 gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
          Length = 1052

 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 174/367 (47%), Gaps = 28/367 (7%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           ++ WG+   +G LG  + G+E         LLP  +E       Q IACG +H + +T  
Sbjct: 3   LYCWGDA-SHGQLG--LGGIE-----NEQILLPSQIEFKPDSPVQQIACGHRHTLFLTAN 54

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           GQ+++ G     +LGH  E     P  I  L    +  +ACG  H+ A+T  G + +WGD
Sbjct: 55  GQVYACGNNDHHQLGH--ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGD 112

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++ G +G  ++       K+   +    +  I CG  H+ A+TS G+L+++G   +G 
Sbjct: 113 --NDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNIYGQ 170

Query: 435 LG---HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           LG     D   ++ P  + T+  +     +CG  H+  I +            S  +F W
Sbjct: 171 LGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISK------------SSAVFGW 218

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           G    GQLG  D + R  P  +K    +    V CG   ++ LT  G VF+ G+ +YGQL
Sbjct: 219 GKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQL 278

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           G   S  +   R+   +    I  +ACG+ H +A+V S   VY++G GA+GQLG  +  +
Sbjct: 279 GHGVSNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTIS 338

Query: 611 KQTPTLV 617
           +  P +V
Sbjct: 339 QTLPKVV 345



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 156/333 (46%), Gaps = 31/333 (9%)

Query: 317 IFSWGEGSGGKLGHG-VEAD-VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           ++ WG+ S G+LG G +E + +  P  I+    S +  +ACG  HT  +T +G +Y  G+
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGN 62

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQ---ISSICCGPWHTAAITSAGKLFTFGDGT 431
             H+        ++ H +P K    +  LQ   +  I CG  H+ A+T  G++ ++GD  
Sbjct: 63  NDHH--------QLGHELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWGQILSWGDND 114

Query: 432 FGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            G +GH  D     +P+ +  L     V  +CG  H+ A+             S  +L++
Sbjct: 115 CGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALT------------SCGELYS 162

Query: 491 WGDGAEGQLG---HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           WG    GQLG     D      PL +     I    +ACG + +  ++ +  VF  G   
Sbjct: 163 WGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNT 222

Query: 548 YGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            GQLG      + +P++++ +++   +  + CG  +   ++++  V+T G G  GQLGHG
Sbjct: 223 CGQLGLNDEQNRAYPSQLK-SMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHG 281

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            + N+  P +V  L    +  V CG+  T A+ 
Sbjct: 282 VSNNEMIPRMVIELMGSTITQVACGNRHTLALV 314



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 136/281 (48%), Gaps = 21/281 (7%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           LY WGD  H    LG +      +P ++  + +   +  I CG  HT  +T+ G+++  G
Sbjct: 3   LYCWGDASHGQLGLGGIENEQILLPSQIEFKPDS-PVQQIACGHRHTLFLTANGQVYACG 61

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           +     LGH     T  P  +  L+    +  +CG  H+ A+ E              ++
Sbjct: 62  NNDHHQLGH--ELPTKRPLPIPELQAYVVIQIACGSRHSMALTEWG------------QI 107

Query: 489 FTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
            +WGD   GQ+GH  D +   +P  ++     +  ++ACG++ ++ALT+ G+++S GS  
Sbjct: 108 LSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNI 167

Query: 548 YGQLG--SPGST--GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           YGQLG  SP        P R+   I    +  IACG  H  ++S  S V+ WGK   GQL
Sbjct: 168 YGQLGVQSPKDLPHSNAPLRLT-TILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQL 226

Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           G  D +N+  P+ ++++R   V+ V CG  ++  +    GV
Sbjct: 227 GLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGV 267



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 11/198 (5%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+++ WG  +   L      GV+ S  D   +  P  L + + +   +IACG  H+ L++
Sbjct: 158 GELYSWGSNIYGQL------GVQ-SPKDLPHSNAPLRLTTILGIPLATIACGGNHSFLIS 210

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K   +F WG+ + G+LG   E + +YP  + ++    +  V CG+ ++  +T  G ++T 
Sbjct: 211 KSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTC 270

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGT 431
           G G  N G LG     +  IPR V  ++ G  I+ + CG  HT A+  S G++++FG G 
Sbjct: 271 GAG--NYGQLGHGVSNNEMIPRMVI-ELMGSTITQVACGNRHTLALVPSGGRVYSFGLGA 327

Query: 432 FGALGHGDRSSTSVPREV 449
            G LG  +  S ++P+ V
Sbjct: 328 SGQLGTRNTISQTLPKVV 345



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 3/120 (2%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
           D ++   P  L+S   L  + + CG +++V +T +G +F+ G G+ G+LGHGV  +   P
Sbjct: 230 DEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSNNEMIP 289

Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLS-GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
           +++  L GS I  VACG  HT A+  S G +Y++G G    G LG  + IS  +P+ V G
Sbjct: 290 RMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGAS--GQLGTRNTISQTLPKVVIG 347


>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
 gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
          Length = 1053

 Score =  149 bits (376), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 187/406 (46%), Gaps = 31/406 (7%)

Query: 254 DVFIWGEGLGNGLLG-GAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           +++ WG    +G LG G +   +I +  R    +P   +S V      IACG +H + +T
Sbjct: 2   ELYCWGNA-SHGQLGLGGIEEEQILTPSR----IPWKPDSAV----NQIACGHRHTLFLT 52

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G++++ G     +LGH  E     P  I  L    I  +ACG  H+ A++  G +++W
Sbjct: 53  ASGKVYACGSNDYSQLGH--ELPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSW 110

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           GD  +  G LG  S+       K+   +    +  I CG  H+ A+T  G+L+++G   +
Sbjct: 111 GD--NECGQLGHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSNLY 168

Query: 433 GALG---HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
           G LG     D   ++ P  + TL  +     +CG  H+  I +            S  +F
Sbjct: 169 GQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISK------------SSAVF 216

Query: 490 TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
            WG    GQLG  D   R  P  +K    +    VACG   ++ LT  G VF+ G+  YG
Sbjct: 217 GWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYG 276

Query: 550 QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDN 608
           QLG   S+ +   R+   +    I  +ACG+ H +A+V S+  +Y +G G++GQLG  + 
Sbjct: 277 QLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNT 336

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSN-FTAAICLHKGVSIADHSICS 653
           ++   P LV         S +  SN    A  +H+  S  D SI +
Sbjct: 337 KSLNLPQLVIGPWVSPSGSTLLQSNDAKIASVIHQIFSGGDQSIVT 382


>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase [Rhipicephalus pulchellus]
          Length = 1175

 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 156/329 (47%), Gaps = 25/329 (7%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL--IDALNGSNIHMVAC 355
            + +ACG KH +++   G ++S G    G+LG     D S  KL  + AL+   I  VAC
Sbjct: 87  VREVACGHKHTLVLLANGSVYSCGANDFGQLGQ----DRSMRKLEQVAALSAHEIRAVAC 142

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
           GE H+ A++ +G +++W  G +  G LG  +E    +  KV  ++  L I  I CG  H 
Sbjct: 143 GEAHSLALSDAGQVFSW--GCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHC 200

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTS---VPREVETLKELKTVMASCGVWHTAAIVE 472
            A+ + G+LF++G    G LG G R ST    +PR V  L  +   + +CG  H+  +  
Sbjct: 201 LALANNGELFSWGGNASGQLGLG-RDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLT- 258

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
                       S  +F WG  + GQLG  D   R+ P  +K         V CG + T 
Sbjct: 259 -----------PSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTA 307

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSE 591
           ALTA G VF+ G+  YGQLG      +   R    +    I  ++CG  H +A       
Sbjct: 308 ALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSGR 367

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           +Y +G G +GQLG+G  E+   P  V  L
Sbjct: 368 LYIFGLGMSGQLGNGTLESSALPVTVPGL 396



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/264 (34%), Positives = 132/264 (50%), Gaps = 27/264 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG    NG LG           +    L PKV++    L    IACG+ H + + 
Sbjct: 154 GQVFSWGCN-RNGQLG--------CGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALA 204

Query: 313 KQGQIFSWGEGSGGKLGHGVEA--DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
             G++FSWG  + G+LG G ++  +   P+ +  L G  + +VACG  H+  +T SG ++
Sbjct: 205 NNGELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTPSGTVF 264

Query: 371 TWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
            WG +    LGL  Q   +   + + +  Q    +I  +CCG  HTAA+T+ G +FTFG 
Sbjct: 265 VWGRNSCGQLGLSDQRDRLHPTVLKPLRSQ----RIKHVCCGENHTAALTADGGVFTFGA 320

Query: 430 GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
           GT+G LGHG + + +VPR V  L        SCG  HT A    +G           +L+
Sbjct: 321 GTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSG-----------RLY 369

Query: 490 TWGDGAEGQLGHGDAEPRVVPLCV 513
            +G G  GQLG+G  E   +P+ V
Sbjct: 370 IFGLGMSGQLGNGTLESSALPVTV 393



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 158/343 (46%), Gaps = 39/343 (11%)

Query: 317 IFSWGEGSGGKLG-----HGV--EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
           ++SWG G  G+LG      GV  E  VS P+ +       +  VACG  HT  +  +G +
Sbjct: 47  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 106

Query: 370 YTWGDGIHNLGLLGQVSEISHWIPRKVS--GQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           Y+ G   ++ G LGQ   +     RK+     +   +I ++ CG  H+ A++ AG++F++
Sbjct: 107 YSCG--ANDFGQLGQDRSM-----RKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSW 159

Query: 428 GDGTFGALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
           G    G LG G    + + P+ ++ L  L  V  +CG  H  A+         +NG    
Sbjct: 160 GCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLAL--------ANNG---- 207

Query: 487 KLFTWGDGAEGQLGHG------DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
           +LF+WG  A GQLG G      +  PR V   V V        VACG   ++ LT +G V
Sbjct: 208 ELFSWGGNASGQLGLGRDSTGNERLPRRVSHLVGVP----LALVACGAMHSVGLTPSGTV 263

Query: 541 FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
           F  G    GQLG      +    +   ++ + I+ + CG  H A +++   V+T+G G  
Sbjct: 264 FVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTY 323

Query: 601 GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
           GQLGHG   N+  P  V  L    +  + CG   T A     G
Sbjct: 324 GQLGHGVKVNEAVPRRVVELMGTAISQLSCGRCHTVAYAPQSG 366



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 133/269 (49%), Gaps = 18/269 (6%)

Query: 290 LESTVVLDAQSI---ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDAL 345
           LE    L A  I   ACG  H++ ++  GQ+FSWG    G+LG G E +    PK+I  L
Sbjct: 126 LEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKL 185

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
              +I  +ACG  H  A+  +G+L++WG        LG+ S  +  +PR+VS  + G+ +
Sbjct: 186 ATLHIVQIACGAVHCLALANNGELFSWGGNASGQLGLGRDSTGNERLPRRVS-HLVGVPL 244

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
           + + CG  H+  +T +G +F +G  + G LG  D+     P  ++ L+  +     CG  
Sbjct: 245 ALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGEN 304

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
           HTAA+    G            +FT+G G  GQLGHG      VP  V      +  +++
Sbjct: 305 HTAALTADGG------------VFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLS 352

Query: 526 CGHSITIALTA-TGQVFSMGSADYGQLGS 553
           CG   T+A    +G+++  G    GQLG+
Sbjct: 353 CGRCHTVAYAPQSGRLYIFGLGMSGQLGN 381



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 140/285 (49%), Gaps = 25/285 (8%)

Query: 369 LYTWGDGIH-NLGLL----GQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGK 423
           LY+WG G +  LGL     G  +E     P +V  +     +  + CG  HT  + + G 
Sbjct: 47  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVR-RFGTRAVREVACGHKHTLVLLANGS 105

Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
           +++ G   FG LG  DRS   +  +V  L   +    +CG  H+ A+ +           
Sbjct: 106 VYSCGANDFGQLGQ-DRSMRKL-EQVAALSAHEIRAVACGEAHSLALSD----------- 152

Query: 484 SSKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
            + ++F+WG    GQLG G + E R+ P  +K    +   ++ACG    +AL   G++FS
Sbjct: 153 -AGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFS 211

Query: 543 MGSADYGQLG-SPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
            G    GQLG    STG  + P R+  ++    +  +ACG+ H   ++    V+ WG+ +
Sbjct: 212 WGGNASGQLGLGRDSTGNERLPRRV-SHLVGVPLALVACGAMHSVGLTPSGTVFVWGRNS 270

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            GQLG  D  ++  PT+++ LR +++K V CG N TAA+    GV
Sbjct: 271 CGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGV 315



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 24/215 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++F WG G  +G LG   +    S+ + R   LP+ +   V +    +ACG+ H+V +T
Sbjct: 207 GELFSWG-GNASGQLGLGRD----STGNER---LPRRVSHLVGVPLALVACGAMHSVGLT 258

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  S G+LG   + D  +P ++  L    I  V CGE HT A+T  G ++T+
Sbjct: 259 PSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTF 318

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGT 431
           G G +  G LG   +++  +PR+V  ++ G  IS + CG  HT A    +G+L+ FG G 
Sbjct: 319 GAGTY--GQLGHGVKVNEAVPRRVV-ELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGM 375

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            G LG+G   S+++P  V             G+WH
Sbjct: 376 SGQLGNGTLESSALPVTVP------------GLWH 398


>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
 gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
          Length = 1058

 Score =  149 bits (375), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 175/368 (47%), Gaps = 28/368 (7%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +++ WG    +G LG  + G+E         L P+ +  T     Q ++CG +H + +T 
Sbjct: 6   ELYCWGST-SHGQLG--LGGIE-----DEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTA 57

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G++++ G     +LGH  +     P+LI  L    I  ++CG  H+ A++  G + +WG
Sbjct: 58  TGKVYACGSNDYSQLGH--DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWG 115

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
           D  ++ G LG  +E       KV  Q+    +  I CG  H+ A+TS G+L+++G   +G
Sbjct: 116 D--NDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYG 173

Query: 434 ALG---HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            LG     D +  + P  + TL  +     +CG  H+  I +            S  +F 
Sbjct: 174 QLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK------------SGAVFG 221

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG    GQLG  D   R  P  +K    +     ACG   ++ LT  G VF+ G+  YGQ
Sbjct: 222 WGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQ 281

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG   S+ +   R+   +    I  +ACG+ H +A V S+ +VY +G G++GQLG    +
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGTRSTK 341

Query: 610 NKQTPTLV 617
           +   P +V
Sbjct: 342 SLMLPQVV 349



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 157/338 (46%), Gaps = 31/338 (9%)

Query: 316 QIFSWGEGSGGKLGHGVEAD--VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           +++ WG  S G+LG G   D  +  P+ I     + +  V+CG  HT  +T +G +Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACG 65

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ---ISSICCGPWHTAAITSAGKLFTFGDG 430
              +        S++ H +P K    +  LQ   I  I CG  H+ A++  G++ ++GD 
Sbjct: 66  SNDY--------SQLGHDLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 431 TFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
             G LGH  ++    +P+ V  L     V  +CG  H+ A+             S  +L+
Sbjct: 118 DCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALT------------SCGELY 165

Query: 490 TWGDGAEGQLG---HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           +WG    GQLG     D      PL +     I    +ACG + +  ++ +G VF  G  
Sbjct: 166 SWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225

Query: 547 DYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           + GQLG    T + +PT+++  ++   +   ACG      ++++  V+T G GA GQLGH
Sbjct: 226 NCGQLGLNDETNRAYPTQLK-TLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
           G + N+  P +V  L    +  V CG+  T A    +G
Sbjct: 285 GFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRG 322



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 135/282 (47%), Gaps = 21/282 (7%)

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           +LY WG   H    LG + +     PR++    +   +  + CG  HT  +T+ GK++  
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDT-AVQQVSCGHRHTLFLTATGKVYAC 64

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           G   +  LGH     T  P+ +  L++   +  SCG  H+ A+ +              +
Sbjct: 65  GSNDYSQLGHD--LPTKRPQLIPELQDYVIIQISCGSRHSLALSDWG------------Q 110

Query: 488 LFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           + +WGD   GQLGH   +  V +P  V+     +  ++ACG++ ++ALT+ G+++S GS 
Sbjct: 111 VLSWGDNDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSN 170

Query: 547 DYGQLG--SPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
            YGQLG  SP       +P R+   +    +  IACG  H  ++S    V+ WG+   GQ
Sbjct: 171 IYGQLGVNSPNDLTHCNYPLRLT-TLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           LG  D  N+  PT ++ LR   V+   CG  F+  +    GV
Sbjct: 230 LGLNDETNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGV 271



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 87/162 (53%), Gaps = 13/162 (8%)

Query: 484 SSKKLFTWGDGAEGQLGHGDAE------PRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
           S K+L+ WG  + GQLG G  E      PR +P     + D +  +V+CGH  T+ LTAT
Sbjct: 3   SGKELYCWGSTSHGQLGLGGIEDEQILTPRQIPW----TPDTAVQQVSCGHRHTLFLTAT 58

Query: 538 GQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
           G+V++ GS DY QLG    T K P  I   ++   I  I+CGS H   +S   +V +WG 
Sbjct: 59  GKVYACGSNDYSQLGHDLPT-KRPQLIP-ELQDYVIIQISCGSRHSLALSDWGQVLSWGD 116

Query: 598 GANGQLGHG-DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
              GQLGH  + E  Q P +V  L  K V  + CG+N + A+
Sbjct: 117 NDCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLAL 158



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 99/198 (50%), Gaps = 11/198 (5%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+++ WG  +  G LG  VN    S  D      P  L + + +   +IACG  H+ L++
Sbjct: 162 GELYSWGSNI-YGQLG--VN----SPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS 214

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K G +F WG  + G+LG   E + +YP  +  L    +   ACG+  +  +T  G ++T 
Sbjct: 215 KSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTC 274

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G +  G LG     +  +PR V  ++ G  I+ + CG  HT A + S GK++ FG G+
Sbjct: 275 GAGAY--GQLGHGFSSNEMLPRMVM-ELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGS 331

Query: 432 FGALGHGDRSSTSVPREV 449
            G LG     S  +P+ V
Sbjct: 332 SGQLGTRSTKSLMLPQVV 349



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 13/147 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG            N  ++   D  +   P  L++   L  +  ACG + +V +T
Sbjct: 217 GAVFGWGRN----------NCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEFSVFLT 266

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS-GDLYT 371
            +G +F+ G G+ G+LGHG  ++   P+++  L GS I  VACG  HT A   S G +Y 
Sbjct: 267 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYA 326

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSG 398
           +G G  + G LG  S  S  +P+ V G
Sbjct: 327 FGLG--SSGQLGTRSTKSLMLPQVVIG 351


>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 277

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/281 (35%), Positives = 146/281 (51%), Gaps = 21/281 (7%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNI-HMVACGEFHTCAVTLSGDLYTWGDG 375
           +FSWG G  G+LG G  +D   P  +DAL G  I   V CG +HT AV  +GDLYTWG G
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAVASNGDLYTWGGG 60

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
           ++  G LG  +E  H  PR+V   + GL I  I CG  HTA +TS G L+T+GD   G  
Sbjct: 61  MY--GKLGHGNESGHSTPRRVE-ALVGLSIVDIACGSRHTAVVTSKGCLYTWGDKENGVA 117

Query: 436 GHGD-RSSTSVPREVETLKELKTV-MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           GHGD       P+ +E L   K V +++CG +HTA + +              + F WG+
Sbjct: 118 GHGDTEGHQYTPKLLERLNGKKVVQLSACG-FHTACLTD------------DHETFAWGE 164

Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS 553
           G  G+LG+G       P  ++       C+VACG   +  +T  G++++ G  ++GQLG 
Sbjct: 165 GKFGRLGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGH 224

Query: 554 PGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
                K  PT +E  +    ++ I CG  H   ++S+ E +
Sbjct: 225 ADKVNKLKPTLVEA-LDGVVVKQITCGWSHSVALTSEGEYH 264



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/285 (32%), Positives = 141/285 (49%), Gaps = 23/285 (8%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           VF WG G  +G LG         ++D+ +      L    ++    + CGS H   V   
Sbjct: 1   VFSWGRGE-DGQLGIG------DTSDQDEPTYVDALRGVGII--THVTCGSYHTAAVASN 51

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           G +++WG G  GKLGHG E+  S P+ ++AL G +I  +ACG  HT  VT  G LYTWGD
Sbjct: 52  GDLYTWGGGMYGKLGHGNESGHSTPRRVEALVGLSIVDIACGSRHTAVVTSKGCLYTWGD 111

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
                G+ G      H    K+  ++ G ++  +    +HTA +T   + F +G+G FG 
Sbjct: 112 --KENGVAGHGDTEGHQYTPKLLERLNGKKVVQLSACGFHTACLTDDHETFAWGEGKFGR 169

Query: 435 LGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG 494
           LG+G   +   PR +E+L        +CG +H+A I                K++T+G G
Sbjct: 170 LGNGTERNCHSPRLIESLIGKYPCQVACGGFHSAVITR------------DGKMYTFGGG 217

Query: 495 AEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
             GQLGH D   ++ P  V+  D +   ++ CG S ++ALT+ G+
Sbjct: 218 EHGQLGHADKVNKLKPTLVEALDGVVVKQITCGWSHSVALTSEGE 262



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 10/117 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           + F WGEG   G LG   NG E      R+   P+++ES +      +ACG  H+ ++T+
Sbjct: 158 ETFAWGEGK-FGRLG---NGTE------RNCHSPRLIESLIGKYPCQVACGGFHSAVITR 207

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
            G+++++G G  G+LGH  + +   P L++AL+G  +  + CG  H+ A+T  G+ +
Sbjct: 208 DGKMYTFGGGEHGQLGHADKVNKLKPTLVEALDGVVVKQITCGWSHSVALTSEGEYH 264



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 1/48 (2%)

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKS-VVCGSNFTAAI 638
           V++WG+G +GQLG GD  ++  PT V+ALR   + + V CGS  TAA+
Sbjct: 1   VFSWGRGEDGQLGIGDTSDQDEPTYVDALRGVGIITHVTCGSYHTAAV 48


>gi|390352695|ref|XP_003727958.1| PREDICTED: uncharacterized protein LOC100887866 [Strongylocentrotus
            purpuratus]
          Length = 1139

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 158/294 (53%), Gaps = 35/294 (11%)

Query: 322  EGSGGKLGHGVEADVSYPKLI-DALNGSN----------IHMVACGEFHTCAVTLSGDLY 370
            +GS   L +G   D++ P    D LN S+           +++ACG+ H  A+  +GD+Y
Sbjct: 735  QGSTQSLENGHACDLTIPVCPEDTLNSSDRLPVGLLLPTQNVLACGQDHA-AIVANGDVY 793

Query: 371  TWGDGIHNLGLLGQ--VSEISHWIP--RKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            TWG    + G LGQ  +  +    P  R  +  M G+ + ++ CG  HT A+T  GKL++
Sbjct: 794  TWGRA--HEGRLGQGDIMSLDGRAPPLRVETLHMHGIHVRAVACGKEHTMAVTQEGKLYS 851

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G  ++G LG GDR+  S P  VE L   + +  +CG  HT  + +             +
Sbjct: 852  WGSSSYGQLGVGDRNVHSRPVAVEALSGQRCLSVACGQLHTLVLTQ------------DQ 899

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
            +L+++G G  GQLGHGD E +++P  V      +   ++ G++ + ALT  GQV+  GS+
Sbjct: 900  RLWSFGWGVHGQLGHGDVEDQILPKLVNQLSKCAIVGISAGYAHSGALTNDGQVWMFGSS 959

Query: 547  DYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSY-HIAVVSSKSEVYTWGK 597
             +GQLG+ GS GK   P R++    H ++  + CG Y +IA+ S+  +VYTWGK
Sbjct: 960  SFGQLGT-GSIGKSTVPVRLKALSSH-HVSILTCGYYSNIAITSNPQKVYTWGK 1011



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 173/382 (45%), Gaps = 54/382 (14%)

Query: 294  VVLDAQSI-ACGSKHAVLVTKQGQIFSWGEGSGGKLGHG--VEADVSYPKL-IDALNGSN 349
            ++L  Q++ ACG  HA +V   G +++WG    G+LG G  +  D   P L ++ L+   
Sbjct: 769  LLLPTQNVLACGQDHAAIVAN-GDVYTWGRAHEGRLGQGDIMSLDGRAPPLRVETLHMHG 827

Query: 350  IHM--VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISS 407
            IH+  VACG+ HT AVT  G LY+WG    + G LG      H  P  V   + G +  S
Sbjct: 828  IHVRAVACGKEHTMAVTQEGKLYSWGSS--SYGQLGVGDRNVHSRPVAVEA-LSGQRCLS 884

Query: 408  ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
            + CG  HT  +T   +L++FG G  G LGHGD     +P+ V  L +   V  S G  H+
Sbjct: 885  VACGQLHTLVLTQDQRLWSFGWGVHGQLGHGDVEDQILPKLVNQLSKCAIVGISAGYAHS 944

Query: 468  AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
             A+             +  +++ +G  + GQLG G      VP+ +K         + CG
Sbjct: 945  GALT------------NDGQVWMFGSSSFGQLGTGSIGKSTVPVRLKALSSHHVSILTCG 992

Query: 528  HSITIALTATGQ-VFSMGSADY---------------GQLGSPGSTGK------------ 559
            +   IA+T+  Q V++ G +                  +  +P    +            
Sbjct: 993  YYSNIAITSNPQKVYTWGKSPLELRQALQLARKRHQSSRYSNPDPHHQTVTRLPSLPLEN 1052

Query: 560  ---FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTL 616
                P+ +  NI+   I+ +     H  ++++  ++Y+WG    GQLG G+  ++  P L
Sbjct: 1053 QHLLPSLVPTNIQAP-IKKMTMSGNHYLMLTTVGDLYSWGSNEAGQLGMGNRVSQSVPVL 1111

Query: 617  VEALRDKQVKSVVCGSNFTAAI 638
            +   RD Q  +V  GS F+ A+
Sbjct: 1112 INRSRDDQFVAVAAGSRFSLAV 1133



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 172/380 (45%), Gaps = 34/380 (8%)

Query: 230  RISLSSAVSSSSQGSCHEDFDGL---GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALL 286
            R+ +   + + +  +C +D   +   GDV+ WG     G LG      +I S D R    
Sbjct: 764  RLPVGLLLPTQNVLACGQDHAAIVANGDVYTWGRA-HEGRLGQG----DIMSLDGRAP-- 816

Query: 287  PKVLESTVV--LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
            P  +E+  +  +  +++ACG +H + VT++G+++SWG  S G+LG G     S P  ++A
Sbjct: 817  PLRVETLHMHGIHVRAVACGKEHTMAVTQEGKLYSWGSSSYGQLGVGDRNVHSRPVAVEA 876

Query: 345  LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
            L+G     VACG+ HT  +T    L+++G G+H  G LG   ++   I  K+  Q+    
Sbjct: 877  LSGQRCLSVACGQLHTLVLTQDQRLWSFGWGVH--GQLGH-GDVEDQILPKLVNQLSKCA 933

Query: 405  ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
            I  I  G  H+ A+T+ G+++ FG  +FG LG G    ++VP  ++ L      + +CG 
Sbjct: 934  IVGISAGYAHSGALTNDGQVWMFGSSSFGQLGTGSIGKSTVPVRLKALSSHHVSILTCGY 993

Query: 465  WHTAAIVEVAGK--TSGSNGLSSKKLFTWGDGAEGQLGHGDAEP---------------- 506
            +   AI     K  T G + L  ++             + + +P                
Sbjct: 994  YSNIAITSNPQKVYTWGKSPLELRQALQLARKRHQSSRYSNPDPHHQTVTRLPSLPLENQ 1053

Query: 507  RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIE 565
             ++P  V  +      K+    +  + LT  G ++S GS + GQLG      +  P  I 
Sbjct: 1054 HLLPSLVPTNIQAPIKKMTMSGNHYLMLTTVGDLYSWGSNEAGQLGMGNRVSQSVPVLIN 1113

Query: 566  GNIKHRYIEDIACGSYHIAV 585
             +   +++   A   + +AV
Sbjct: 1114 RSRDDQFVAVAAGSRFSLAV 1133


>gi|198420568|ref|XP_002123770.1| PREDICTED: similar to guanine nucleotide exchange factor p532,
           partial [Ciona intestinalis]
          Length = 2540

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 190/388 (48%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           DV+ WG    + L        E+ S D+   + PK ++S    ++Q +  G      V+ 
Sbjct: 285 DVYAWGSNSSHQL-------AELGS-DK--IVFPKKVKS--FGNSQMLEAGQYCTFAVSG 332

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
            G + S G+GS G+LG G   + S  K I       I  ++     + HT A+T  G ++
Sbjct: 333 DGCVRSCGKGSYGRLGLGDSNNQSTLKTIVFDPPQTIRKISSSKGSDGHTLALTTEGCIF 392

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  S ++H  P+ + G +    +  +  G  H+A +T  G+LFT+G+G
Sbjct: 393 SWGDG--DYGKLGHGSSLTHKSPKIIEGPLARRIVVCVSAGYRHSACVTQEGQLFTWGEG 450

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            +G LG GD +S +VP  V+ +    +V+  CG  HT  + +        +GL+   +++
Sbjct: 451 DYGRLGLGDNTSRNVPVLVKDIASAGSVV--CGSSHTLVLAQ--------DGLT---VWS 497

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGHGD      P  ++  + + F K+  G   ++AL  +GQVFS G      
Sbjct: 498 FGAGDNGKLGHGDTSRVYRPKVIESINGMMFYKLCAGSQYSLALNDSGQVFSWGCGACLG 557

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD-NE 609
            GSP +T   PT I+  +    + DI  G  H   ++  +EVY WG  A GQ G G  N 
Sbjct: 558 CGSPDATFMKPTLID-ELTFTRVVDITSGDGHCMALTHNNEVYCWGNNAMGQCGLGHTNS 616

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
               PT V+ L +  +  +  G++ + A
Sbjct: 617 PISVPTQVQQLNNVTIHQISAGTSHSIA 644



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 147/300 (49%), Gaps = 37/300 (12%)

Query: 351 HMVACGEFHTCAVTLSG-DLYTWG-DGIHNLGLLGQVSEISHWIPRKVS--GQMEGLQIS 406
           + ++C E  T +V ++  D+Y WG +  H L  LG    +    P+KV   G  + L+  
Sbjct: 267 YAISCTETATKSVDMNNCDVYAWGSNSSHQLAELGSDKIV---FPKKVKSFGNSQMLEAG 323

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV-----ETLKELKTVMAS 461
             C     T A++  G + + G G++G LG GD ++ S  + +     +T++++ +   S
Sbjct: 324 QYC-----TFAVSGDGCVRSCGKGSYGRLGLGDSNNQSTLKTIVFDPPQTIRKISSSKGS 378

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDI 519
            G  HT A+      T G        +F+WGDG  G+LGHG +     P  ++  ++  I
Sbjct: 379 DG--HTLALT-----TEGC-------IFSWGDGDYGKLGHGSSLTHKSPKIIEGPLARRI 424

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
             C V+ G+  +  +T  GQ+F+ G  DYG+LG   +T +    +  +I       + CG
Sbjct: 425 VVC-VSAGYRHSACVTQEGQLFTWGEGDYGRLGLGDNTSRNVPVLVKDIASA--GSVVCG 481

Query: 580 SYHIAVVSSKS-EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           S H  V++     V+++G G NG+LGHGD      P ++E++       +  GS ++ A+
Sbjct: 482 SSHTLVLAQDGLTVWSFGAGDNGKLGHGDTSRVYRPKVIESINGMMFYKLCAGSQYSLAL 541


>gi|298713261|emb|CBJ26957.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 530

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 183/390 (46%), Gaps = 53/390 (13%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           E+   D  +   P + +++   D   +  G++   ++T  G+++S G  S G+ G G E 
Sbjct: 23  ELGLGDTLERHTPTLSQTSRGKDIVGVTAGNELTAVLTNTGEVYSCGYNSEGQCGIG-EI 81

Query: 335 DVSYPKLIDALN-----------GSNIHMVACGEF--HTCAVTLSGDLYTWGDGIHNLGL 381
           D + P+++ +L               + +V  G    H   VT  G+L T G   +N G 
Sbjct: 82  DETVPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGELQTCGR--NNSGQ 139

Query: 382 LGQVSEIS--HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGD 439
           LG   E+   + +PR V+G   G +++ + C   HT  +T   + +TFG   +G LGHGD
Sbjct: 140 LGH-GEVGKGYSLPRPVAG-FAGYRVTKVACSYSHTVVVTDDDRTWTFGGNGYGQLGHGD 197

Query: 440 RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQL 499
            SS S P  +   + L  +  +CGV+HT  +V VA          S  L+++G    GQL
Sbjct: 198 HSSRSAPAALACFQGLGVLSVACGVYHT--VVSVA----------SGGLYSFGKNDHGQL 245

Query: 500 GHGDAEPRVVPL----CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG--- 552
           G    E R  P+    C  V +     ++ACG+  T+AL+  G+V + G  DYGQLG   
Sbjct: 246 GLEGGESRFTPVQHRACTSVVE-----QLACGYYHTVALSRAGEVVAFGRNDYGQLGLGH 300

Query: 553 --SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
             S    G+ P     ++    I  +ACGSYH   +  +  VY +G+  +GQLG G  E+
Sbjct: 301 RESTWQGGQVP-----DLAGLRIIQVACGSYHTISLDDEGRVYPFGRNNHGQLGTGTRED 355

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
              P  VE L    V  V  G  F   +CL
Sbjct: 356 ACRPCFVEGLSQSFVCQVAAG--FYHTLCL 383



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 115/252 (45%), Gaps = 18/252 (7%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
           LP+ +          +AC   H V+VT   + +++G    G+LGHG  +  S P  +   
Sbjct: 151 LPRPVAGFAGYRVTKVACSYSHTVVVTDDDRTWTFGGNGYGQLGHGDHSSRSAPAALACF 210

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQ 404
            G  +  VACG +HT     SG LY++G   H  LGL G  S  +    R  +  +E   
Sbjct: 211 QGLGVLSVACGVYHTVVSVASGGLYSFGKNDHGQLGLEGGESRFTPVQHRACTSVVE--- 267

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
              + CG +HT A++ AG++  FG   +G LG G R ST    +V  L  L+ +  +CG 
Sbjct: 268 --QLACGYYHTVALSRAGEVVAFGRNDYGQLGLGHRESTWQGGQVPDLAGLRIIQVACGS 325

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
           +HT ++ +              +++ +G    GQLG G  E    P  V+       C+V
Sbjct: 326 YHTISLDD------------EGRVYPFGRNNHGQLGTGTREDACRPCFVEGLSQSFVCQV 373

Query: 525 ACGHSITIALTA 536
           A G   T+ LT 
Sbjct: 374 AAGFYHTLCLTG 385



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 97/230 (42%), Gaps = 29/230 (12%)

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           +L+ FG    G LG GD      P   +T +    V  + G   TA +            
Sbjct: 12  ELYGFGQNACGELGLGDTLERHTPTLSQTSRGKDIVGVTAGNELTAVLT----------- 60

Query: 483 LSSKKLFTWGDGAEGQLGHGDAE---PRVVPLCVKVS---------DDISFCKVACGHSI 530
            ++ ++++ G  +EGQ G G+ +   P +VP   KV+           +S      G   
Sbjct: 61  -NTGEVYSCGYNSEGQCGIGEIDETVPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEH 119

Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGK---FPTRIEGNIKHRYIEDIACGSYHIAVVS 587
            + +T  G++ + G  + GQLG  G  GK    P  + G   +R +  +AC   H  VV+
Sbjct: 120 LVVVTEEGELQTCGRNNSGQLGH-GEVGKGYSLPRPVAGFAGYR-VTKVACSYSHTVVVT 177

Query: 588 SKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                +T+G    GQLGHGD+ ++  P  +   +   V SV CG   T  
Sbjct: 178 DDDRTWTFGGNGYGQLGHGDHSSRSAPAALACFQGLGVLSVACGVYHTVV 227



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 69/169 (40%), Gaps = 13/169 (7%)

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
              ++L+ +G  A G+LG GD   R  P   + S       V  G+ +T  LT TG+V+S
Sbjct: 8   FQERELYGFGQNACGELGLGDTLERHTPTLSQTSRGKDIVGVTAGNELTAVLTNTGEVYS 67

Query: 543 MGSADYGQLGSPGSTGKFPTRIEGNIKHRYIE------------DIACGSYHIAVVSSKS 590
            G    GQ G        P  +    K    E                GS H+ VV+ + 
Sbjct: 68  CGYNSEGQCGIGEIDETVPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEG 127

Query: 591 EVYTWGKGANGQLGHGD-NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           E+ T G+  +GQLGHG+  +    P  V      +V  V C  + T  +
Sbjct: 128 ELQTCGRNNSGQLGHGEVGKGYSLPRPVAGFAGYRVTKVACSYSHTVVV 176


>gi|282722852|gb|ADA84472.1| retinitis pigmentosa GTPase regulator protein 2 ORF15 [Danio rerio]
          Length = 1413

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 165/340 (48%), Gaps = 31/340 (9%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+CG +H  LVT+ G++F +G  + G+LG G +  V+ P  + AL    + + ACG  HT
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHT 100

Query: 361 CAVTLSGDLYT-WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
              T  G+LY   G+    LGL       S  +    + Q     I  +  G   +AA+T
Sbjct: 101 LVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQG---PIKMLAAGSNTSAALT 157

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G+L+  GD + G +G G  S+   P+EV   K  +    SCG +H +A V V G    
Sbjct: 158 QDGRLYMRGDNSEGQIGLGKESNALTPQEVSVGK--RVFWVSCGYYH-SAFVTVDG---- 210

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
                   L+T+G+   G+LG      A  +V      + D +   +VACG   T+ALT 
Sbjct: 211 -------ALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRV--VQVACGGGHTVALTE 261

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH---RYIEDIACGSYHIAVVSSKSEVY 593
             +V+S G   +GQLG    T  F +R+   ++H     ++  ACG  H A+++    +Y
Sbjct: 262 N-EVYSFGLGQFGQLGH--GTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLY 318

Query: 594 TWGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCG 631
           T+G G +G+LG G+    N+  PTL     D  V SV CG
Sbjct: 319 TFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCG 358



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 5/121 (4%)

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGS 580
            +++CG   T  +T  G++F  GS ++GQLG    +T   PT ++  ++   ++  ACG 
Sbjct: 39  LRISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKA-LRSERVKLTACGR 97

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ--VKSVVCGSNFTAAI 638
            H  V +S+  +Y  G    GQLG GD  ++ +  LVE   +KQ  +K +  GSN +AA+
Sbjct: 98  THTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFF-NKQGPIKMLAAGSNTSAAL 156

Query: 639 C 639
            
Sbjct: 157 T 157



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 2/83 (2%)

Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE--ADVSYPK 340
           ++ LP+V+E       +  ACG  H  L+T  G ++++G+G  GKLG G E   +   P 
Sbjct: 283 ESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPT 342

Query: 341 LIDALNGSNIHMVACGEFHTCAV 363
           L       ++H V CG  H   +
Sbjct: 343 LCPRFLDYHVHSVTCGGCHMLVL 365


>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
 gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
          Length = 1058

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 174/368 (47%), Gaps = 28/368 (7%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +++ WG    +G LG  + G+E         L P  +  T     + +ACG +H + +T 
Sbjct: 6   ELYCWGST-SHGQLG--LGGIE-----DEQILTPSQIPWTPDTAVEQVACGHRHTLFLTA 57

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G++++ G     +LGH +      P LI  L    I  ++CG  H+ A++  G + +WG
Sbjct: 58  NGKVYACGSNDHSQLGHDLPT--KRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWG 115

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
           D  ++ G LG  ++       KV  Q+    +  I CG  H+ A+TS G+L+++G   +G
Sbjct: 116 D--NDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSNIYG 173

Query: 434 ALGHG---DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            LG     D +  + P  + TL  +     +CG  H+  I +            S  +F 
Sbjct: 174 QLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK------------SGAVFG 221

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG    GQLG  D   R  P  +K    +    VACG   ++ LT  G VF+ G+  YGQ
Sbjct: 222 WGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG   S+ +   R+   +    I  +ACG+ H +A+V S+  VY +G G++GQLG    +
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 341

Query: 610 NKQTPTLV 617
           +   P +V
Sbjct: 342 SLMLPQVV 349



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 158/338 (46%), Gaps = 31/338 (9%)

Query: 316 QIFSWGEGSGGKLGHGVEAD--VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           +++ WG  S G+LG G   D  +  P  I     + +  VACG  HT  +T +G +Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACG 65

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ---ISSICCGPWHTAAITSAGKLFTFGDG 430
              H        S++ H +P K    +  LQ   I  I CG  H+ A++  G++ ++GD 
Sbjct: 66  SNDH--------SQLGHDLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 431 TFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
             G LGH  D+    +P+ V  L     V  +CG  H+ A+             S  +L+
Sbjct: 118 DCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALT------------SCGELY 165

Query: 490 TWGDGAEGQLGHGDAEPRV---VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           +WG    GQLG    +       PL +     I    +ACG + +  ++ +G VF  G  
Sbjct: 166 SWGSNIYGQLGVNSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225

Query: 547 DYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           + GQLG    T + +PT+++  ++   +  +ACG      ++++  V+T G GA GQLGH
Sbjct: 226 NCGQLGLNDETNRAYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
           G + N+  P +V  L    +  V CG+  T A+   +G
Sbjct: 285 GFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRG 322



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 133/282 (47%), Gaps = 21/282 (7%)

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           +LY WG   H    LG + +     P ++    +   +  + CG  HT  +T+ GK++  
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDT-AVEQVACGHRHTLFLTANGKVYAC 64

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           G      LGH     T  P  +  L++   +  SCG  H+ A+ +              +
Sbjct: 65  GSNDHSQLGHD--LPTKRPLLIPELQDYVIIQISCGSRHSLALSDWG------------Q 110

Query: 488 LFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           + +WGD   GQLGH  D E   +P  V+     +  ++ACG++ ++ALT+ G+++S GS 
Sbjct: 111 VLSWGDNDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGSN 170

Query: 547 DYGQLG--SPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
            YGQLG  SP       +P R+   +    +  IACG  H  ++S    V+ WG+   GQ
Sbjct: 171 IYGQLGVNSPKDLTHCNYPLRLT-TLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           LG  D  N+  PT ++ LR   V+ V CG  F+  +    GV
Sbjct: 230 LGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 271



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/158 (38%), Positives = 86/158 (54%), Gaps = 5/158 (3%)

Query: 484 SSKKLFTWGDGAEGQLGHG--DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
           S K+L+ WG  + GQLG G  + E  + P  +  + D +  +VACGH  T+ LTA G+V+
Sbjct: 3   SGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVY 62

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           + GS D+ QLG    T K P  I   ++   I  I+CGS H   +S   +V +WG    G
Sbjct: 63  ACGSNDHSQLGHDLPT-KRPLLIP-ELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCG 120

Query: 602 QLGHG-DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           QLGH  D E  Q P +V  L  K V  + CG+N + A+
Sbjct: 121 QLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLAL 158



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 100/198 (50%), Gaps = 11/198 (5%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+++ WG  +  G LG  VN    S  D      P  L + + +   +IACG  H+ L++
Sbjct: 162 GELYSWGSNI-YGQLG--VN----SPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS 214

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K G +F WG  + G+LG   E + +YP  +  L    +  VACG+  +  +T  G ++T 
Sbjct: 215 KSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTC 274

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGT 431
           G G +  G LG     +  +PR V  ++ G  I+ + CG  HT A+  S G+++ FG G+
Sbjct: 275 GAGAY--GQLGHGFSSNEMLPRMVM-ELMGSTITQVACGNRHTLALVPSRGRVYAFGLGS 331

Query: 432 FGALGHGDRSSTSVPREV 449
            G LG     S  +P+ V
Sbjct: 332 SGQLGTRSTKSLMLPQVV 349



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 13/147 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG            N  ++   D  +   P  L++   L  + +ACG + +V +T
Sbjct: 217 GAVFGWGRN----------NCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLT 266

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS-GDLYT 371
            +G +F+ G G+ G+LGHG  ++   P+++  L GS I  VACG  HT A+  S G +Y 
Sbjct: 267 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYA 326

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSG 398
           +G G  + G LG  S  S  +P+ V G
Sbjct: 327 FGLG--SSGQLGTRSTKSLMLPQVVIG 351


>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
 gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
 gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
          Length = 1050

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 162/324 (50%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGH--EREGNKPEQIGALADQHIVHVACGE 93

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            H+ A++  G L++WG G    LGL+    E S  +PR +  ++    I  + CG WH  
Sbjct: 94  SHSLALSDQGQLFSWGAGSDGQLGLM--TIEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+ + G+ FT+G  + G LG G +  S + P+ V +L+ +       G  H+ A+     
Sbjct: 151 ALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFAL----- 205

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             SG+       +F WG    GQLG  D + R  P  VK+        ++CG   T  LT
Sbjct: 206 SLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
            +G VF+ G+   GQLG      +   R    +    +  IACG  H +A V S   +Y 
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G GA GQLG G   N + P+ V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 163/336 (48%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  ++  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISPNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -VNTKGQLGHEREGNK--PEQI-GALADQHIVHVACGESHSLALSDQGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTIEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGR 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +V  G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 126/251 (50%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +  +E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTIEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG  S G+LG G E    + P+ + +L G  +  V  G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVVAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG  ++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA GQLG G
Sbjct: 320 GCGARGQLGTG 330



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 93/199 (46%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG    +G LG    G E  S        P+ + S   +    +  G  H+  ++
Sbjct: 156 GQFFTWGRN-SHGQLG---LGKEFPSQAS-----PQRVRSLEGIPLAQVVAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 267 GAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342


>gi|301109553|ref|XP_002903857.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
 gi|262096860|gb|EEY54912.1| regulator of chromosome condensation (RCC1)-like protein
            [Phytophthora infestans T30-4]
          Length = 1598

 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 186/421 (44%), Gaps = 60/421 (14%)

Query: 253  GDVFIWGEGLGNGL-------LGGAVNGVEISSADR---RDALLPKVLESTVVLDAQSIA 302
            G   +WG  LG  L        G +   + +S+ +    R    P  L   V      IA
Sbjct: 1196 GLALVWGYPLGLSLDEEARISPGTSTLSLRLSTENLSAVRMVSFPPPLRRVV-----QIA 1250

Query: 303  CGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP-------KLIDA--LNGSNIHMV 353
            CG +H  L+T    ++++G G  G+LGHG E D + P        LI A  +    +  V
Sbjct: 1251 CGYRHTALITDDRHLYTFGHGECGRLGHGTEEDCTDPIPVGYFTSLIAAEGVEFGGVVDV 1310

Query: 354  ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
            +CG  HT  VT +GDLY +G G    G LG     S   P +V  +     I+++ CG  
Sbjct: 1311 SCGREHTMVVTGNGDLYGFGWG--EAGRLGTGETGSSLYPSRVDLR----NIAAVACGRE 1364

Query: 414  HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
            HT A+TS G++F FG G  G LG+G  +   +P  VE L+E   V  + G  H+ A+   
Sbjct: 1365 HTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEYSIVAIAAGECHSCALSR- 1423

Query: 474  AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK----------VSDDISFC- 522
                         ++ TWG G+ G LGHG  +  ++P  V           +  DIS   
Sbjct: 1424 -----------DGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISVVT 1472

Query: 523  KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-----FPTRIEGNIKHRYIEDIA 577
             VACG   T+A T  G ++  G A  GQLG+   + +      P  I        I  IA
Sbjct: 1473 SVACGSYHTLAATNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEIRLPTSSG-IRGIA 1531

Query: 578  CGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            CG++  AV S++ +++ WG  A G     D E+      V  L + +   + CG+    A
Sbjct: 1532 CGTFTSAVCSTQGQLFMWGSPAAGNGAPLDVEDAHVKR-VGVLGEFEFSQIACGAYHAVA 1590

Query: 638  I 638
            I
Sbjct: 1591 I 1591



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/306 (32%), Positives = 148/306 (48%), Gaps = 34/306 (11%)

Query: 301  IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
            ++CG +H ++VT  G ++ +G G  G+LG G      YP  +D     NI  VACG  HT
Sbjct: 1310 VSCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPSRVDL---RNIAAVACGREHT 1366

Query: 361  CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
             A+T  G ++ +G G    G LG  SE    +P  V G +E   I +I  G  H+ A++ 
Sbjct: 1367 LALTSKGRVFAFGAGFG--GRLGNGSETDEELPFLVEG-LEEYSIVAIAAGECHSCALSR 1423

Query: 421  AGKLFTFGDGTFGALGHGDRSSTSVPR---------EVETLKELKTVMAS--CGVWHTAA 469
             G++ T+G G+ GALGHG R +  +P           VETL    +V+ S  CG +HT A
Sbjct: 1424 DGEVLTWGFGSSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISVVTSVACGSYHTLA 1483

Query: 470  IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG--HGDAEPRVV--PLCVKVSDDISFCKVA 525
                    + ++G+    L+ WGD A GQLG  H  A+  VV  P  +++        +A
Sbjct: 1484 --------ATNDGV----LYGWGDAAAGQLGAEHLSAQDLVVLSPKEIRLPTSSGIRGIA 1531

Query: 526  CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAV 585
            CG   +   +  GQ+F  GS   G  G+P        +  G +       IACG+YH   
Sbjct: 1532 CGTFTSAVCSTQGQLFMWGSPAAGN-GAPLDVEDAHVKRVGVLGEFEFSQIACGAYHAVA 1590

Query: 586  VSSKSE 591
            ++ K E
Sbjct: 1591 ITRKLE 1596



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 144/301 (47%), Gaps = 46/301 (15%)

Query: 251  GLGDV--FIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            G GD+  F WGE    G LG    G          +L P  ++   + +  ++ACG +H 
Sbjct: 1322 GNGDLYGFGWGEA---GRLGTGETG---------SSLYPSRVD---LRNIAAVACGREHT 1366

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
            + +T +G++F++G G GG+LG+G E D   P L++ L   +I  +A GE H+CA++  G+
Sbjct: 1367 LALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEYSIVAIAAGECHSCALSRDGE 1426

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSG-----QMEGL-----QISSICCGPWHTAAI 418
            + TWG G  + G LG  +  +  IP  V G      +E L      ++S+ CG +HT A 
Sbjct: 1427 VLTWGFG--SSGALGHGTRDNCLIPTLVDGPWTNPNVETLIHDISVVTSVACGSYHTLAA 1484

Query: 419  TSAGKLFTFGDGTFGALGHGDRSSTSV----PREVETLKELKTVMASCGVWHTAAIVEVA 474
            T+ G L+ +GD   G LG    S+  +    P+E+           +CG + T+A+    
Sbjct: 1485 TNDGVLYGWGDAAAGQLGAEHLSAQDLVVLSPKEIRLPTSSGIRGIACGTF-TSAVCSTQ 1543

Query: 475  GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
            G           +LF WG  A G     D E   V   V V  +  F ++ACG    +A+
Sbjct: 1544 G-----------QLFMWGSPAAGNGAPLDVEDAHVKR-VGVLGEFEFSQIACGAYHAVAI 1591

Query: 535  T 535
            T
Sbjct: 1592 T 1592


>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
 gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
          Length = 1152

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 185/388 (47%), Gaps = 32/388 (8%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L  G+++ +          L+PK+  +T    AQ I  G     ++  
Sbjct: 365 EVYVWGSNSSHQLAEGSMDKI----------LVPKL--ATSFGSAQQIEAGQYCTFVIFP 412

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN---GSNIHMVACGEFHTCAVTLSGDLY 370
            G + + G+GS G+LG G   + +  K ++  N     ++      + HT A+TL G +Y
Sbjct: 413 DGFVHACGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGSDGHTLALTLDGKVY 472

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGDG  + G LG  +  +  IP+ V G +    +  I  G  H+AA+T  G+L+T+G+G
Sbjct: 473 SWGDG--DYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVTEDGELYTWGEG 530

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            +G LGHGD +S +VP +V+ +  +  V  +CG  HT  + +             + +++
Sbjct: 531 DYGRLGHGDNNSRNVPVQVKDVANVGQV--ACGSAHTVCVSQ-----------DGQTVWS 577

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G G  G+LGH D      P  ++    +   KV CG   ++ALT+TGQV+  G      
Sbjct: 578 FGSGDNGKLGHSDTNRVYKPKVIEALQGMVIRKVCCGSQCSLALTSTGQVYVWGCGPSLG 637

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
            GS  +T   P  +     H  + DI+ G  H   ++  + VY WG  + GQ G G    
Sbjct: 638 TGSVDATSATPKLLLALQSHSVV-DISVGDSHCVALTQDNNVYAWGNNSMGQCGQGHCTT 696

Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
             T P  V  L    V  +  G++ T A
Sbjct: 697 PITKPKKVLGLDGVAVHQISAGTSHTVA 724



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 136/287 (47%), Gaps = 26/287 (9%)

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           FH  +   + ++Y WG    +    G + +I   +P+  +      QI +   G + T  
Sbjct: 355 FHGNSFASNEEVYVWGSNSSHQLAEGSMDKI--LVPKLATSFGSAQQIEA---GQYCTFV 409

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE---LKTVMASCGVWHTAAIVEVA 474
           I   G +   G G++G LG GD ++ +  + +    E        +     HT A+    
Sbjct: 410 IFPDGFVHACGKGSYGRLGLGDSTNQTQLKRLNFDNECLVKSVSSSKGSDGHTLALT--- 466

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK-VSDDISFCKVACGHSITIA 533
                       K+++WGDG  G+LGHG+++ + +P  V+    +   C +A G+  + A
Sbjct: 467 ---------LDGKVYSWGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAA 517

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE- 591
           +T  G++++ G  DYG+LG   +  +  P +++       +  +ACGS H   VS   + 
Sbjct: 518 VTEDGELYTWGEGDYGRLGHGDNNSRNVPVQVKDVAN---VGQVACGSAHTVCVSQDGQT 574

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           V+++G G NG+LGH D      P ++EAL+   ++ V CGS  + A+
Sbjct: 575 VWSFGSGDNGKLGHSDTNRVYKPKVIEALQGMVIRKVCCGSQCSLAL 621



 Score = 52.8 bits (125), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 16/123 (13%)

Query: 245 CHEDFDGLGDVFIWGEG--LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIA 302
           C       G V++WG G  LG G        V+ +SA  +  L    L+S  V+D   I+
Sbjct: 617 CSLALTSTGQVYVWGCGPSLGTG-------SVDATSATPKLLL---ALQSHSVVD---IS 663

Query: 303 CGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGEFHTC 361
            G  H V +T+   +++WG  S G+ G G     ++ PK +  L+G  +H ++ G  HT 
Sbjct: 664 VGDSHCVALTQDNNVYAWGNNSMGQCGQGHCTTPITKPKKVLGLDGVAVHQISAGTSHTV 723

Query: 362 AVT 364
           A T
Sbjct: 724 AWT 726


>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Anolis carolinensis]
          Length = 788

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 170/342 (49%), Gaps = 35/342 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+CG +H  +VT+ G+++ +G  + G+LG G +  V+ P  + AL    + + ACG  HT
Sbjct: 40  ISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAACGRNHT 99

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
              T  G++Y  G        LG   E S +    +S   +  +I  +  G + +A +T 
Sbjct: 100 LICTEQGNVYAAGGNSEGQLGLGDTEERSTF--HLISFFTKQHKIKQLAAGSYTSAVLTE 157

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            G+L  +GD + G +G GD++  SVP +V+  K +  +  SCG +H+A I +        
Sbjct: 158 DGQLVMWGDNSEGQIGLGDKAYVSVPHQVDIGKPVSCI--SCGYYHSALITQDG------ 209

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAE---PRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
                 +L+T+G+   G+LG    +    ++  L   +S  +S  KVACG   T+ L A 
Sbjct: 210 ------ELYTFGEPENGKLGLSPKQLKNHKLPQLVSGISGKVS--KVACGGGHTVVL-AE 260

Query: 538 GQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
           G V++ G   YGQLG     G F      P  ++   KH+ I  IACG  H A+++    
Sbjct: 261 GDVYTFGLGQYGQLGH----GTFVFETSEPKTVDHLGKHK-ICHIACGENHTALITENGL 315

Query: 592 VYTWGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCG 631
           +YT+G G +G+LG G+    N+  PTL        V SV CG
Sbjct: 316 MYTFGDGRHGKLGLGEENYTNQFVPTLCSNFLRFIVHSVACG 357



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 132/243 (54%), Gaps = 28/243 (11%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + +A GS  + ++T+ GQ+  WG+ S G++G G +A VS P  +D   G  +  ++CG +
Sbjct: 143 KQLAAGSYTSAVLTEDGQLVMWGDNSEGQIGLGDKAYVSVPHQVDI--GKPVSCISCGYY 200

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
           H+  +T  G+LYT+G+  +    L      +H +P+ VSG + G ++S + CG  HT  +
Sbjct: 201 HSALITQDGELYTFGEPENGKLGLSPKQLKNHKLPQLVSG-ISG-KVSKVACGGGHTVVL 258

Query: 419 TSAGKLFTFGDGTFGALGHGDRS-STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
            + G ++TFG G +G LGHG     TS P+ V+ L + K    +CG  HTA I E     
Sbjct: 259 -AEGDVYTFGLGQYGQLGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALITE----- 312

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAE--PRVVP-LCVKVSDDISFC--KVACG--HSI 530
              NGL    ++T+GDG  G+LG G+     + VP LC   S+ + F    VACG  H +
Sbjct: 313 ---NGL----MYTFGDGRHGKLGLGEENYTNQFVPTLC---SNFLRFIVHSVACGGCHML 362

Query: 531 TIA 533
             A
Sbjct: 363 VFA 365



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 127/276 (46%), Gaps = 50/276 (18%)

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
           I CG  HT+ +T  GKL+ FG   +G LG G +++ + P  V+ LK  K  +A+CG  HT
Sbjct: 40  ISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAACGRNHT 99

Query: 468 AAIVE------VAGKTSGSNGLSSK----------------------------------- 486
               E        G + G  GL                                      
Sbjct: 100 LICTEQGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTKQHKIKQLAAGSYTSAVLTEDG 159

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           +L  WGD +EGQ+G GD     VP  V +   +S C ++CG+  +  +T  G++++ G  
Sbjct: 160 QLVMWGDNSEGQIGLGDKAYVSVPHQVDIGKPVS-C-ISCGYYHSALITQDGELYTFGEP 217

Query: 547 DYGQLG-SPGS--TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           + G+LG SP      K P  + G I  + +  +ACG  H  VV ++ +VYT+G G  GQL
Sbjct: 218 ENGKLGLSPKQLKNHKLPQLVSG-ISGK-VSKVACGGGH-TVVLAEGDVYTFGLGQYGQL 274

Query: 604 GHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAAI 638
           GHG    + + P  V+ L   ++  + CG N TA I
Sbjct: 275 GHGTFVFETSEPKTVDHLGKHKICHIACGENHTALI 310



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 53/169 (31%), Positives = 89/169 (52%), Gaps = 12/169 (7%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+++ +GE   NG LG       +S    ++  LP+++ S +      +ACG  H V++ 
Sbjct: 209 GELYTFGEPE-NGKLG-------LSPKQLKNHKLPQLV-SGISGKVSKVACGGGHTVVLA 259

Query: 313 KQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            +G ++++G G  G+LGHG    + S PK +D L    I  +ACGE HT  +T +G +YT
Sbjct: 260 -EGDVYTFGLGQYGQLGHGTFVFETSEPKTVDHLGKHKICHIACGENHTALITENGLMYT 318

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           +GDG H    LG+ +  + ++P   S  +  + + S+ CG  H     S
Sbjct: 319 FGDGRHGKLGLGEENYTNQFVPTLCSNFLRFI-VHSVACGGCHMLVFAS 366



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 20/187 (10%)

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
           ++CG   T  +T  G+++  GS ++GQLG  S  +  K PT ++  +K   ++  ACG  
Sbjct: 40  ISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNK-PTCVKA-LKPEKVKLAACGRN 97

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL-RDKQVKSVVCGSNFTAAICL 640
           H  + + +  VY  G  + GQLG GD E + T  L+    +  ++K +  GS +T+A+  
Sbjct: 98  HTLICTEQGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTKQHKIKQLAAGS-YTSAVLT 156

Query: 641 HKG------------VSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTA 688
             G            + + D +  S   +Q +  +   +C +CG  +  L +    + T 
Sbjct: 157 EDGQLVMWGDNSEGQIGLGDKAYVS-VPHQVDIGKPV-SCISCGYYHSALITQDGELYTF 214

Query: 689 LAPEINK 695
             PE  K
Sbjct: 215 GEPENGK 221


>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
           niloticus]
          Length = 1004

 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 161/319 (50%), Gaps = 20/319 (6%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + + CG +H+V +   G +++ G  S G+LGH  +A +S P+++ AL+   I MV+CG  
Sbjct: 36  KEVGCGGQHSVFLMHDGSVYTCGSNSCGQLGHD-KAGIS-PEVVGALDTQKITMVSCGRG 93

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQ-VSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           H+ AV   G L+ WG G  + G LG   +E +  IPR V  ++   +IS + CG  H  A
Sbjct: 94  HSMAVNEQGQLFAWGAG--DGGQLGLGTTETTVRIPRLVK-RLCDHRISQVMCGNQHCVA 150

Query: 418 ITSAGKLFTFGDGTFGALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           ++  G+LFT+G  T G LG G    S   P  +++L  +     + G  H+ A+      
Sbjct: 151 LSRDGQLFTWGQNTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFAL-----S 205

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
            SG+       +F WG    GQLG  D + R VP  +K         ++CG   T ALT 
Sbjct: 206 LSGA-------VFGWGKNRAGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAALTK 258

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTW 595
            G +F+ G   +GQLG   +  +   R    +    +  IACG +H +A V S   VY +
Sbjct: 259 DGGLFTFGDGSWGQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYAF 318

Query: 596 GKGANGQLGHGDNENKQTP 614
           G  ++GQLG G   + ++P
Sbjct: 319 GCNSHGQLGTGILGDARSP 337



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/263 (34%), Positives = 136/263 (51%), Gaps = 19/263 (7%)

Query: 296 LDAQSI---ACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIH 351
           LD Q I   +CG  H++ V +QGQ+F+WG G GG+LG G  E  V  P+L+  L    I 
Sbjct: 80  LDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTTETTVRIPRLVKRLCDHRIS 139

Query: 352 MVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCG 411
            V CG  H  A++  G L+TWG        LG+  E S   P  +   + G+ ++ I  G
Sbjct: 140 QVMCGNQHCVALSRDGQLFTWGQNTSGQLGLGK-GEPSKLFPHPLK-SLAGIPLAQITAG 197

Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIV 471
             H+ A++ +G +F +G    G LG  D+   +VP  ++ L+  K V  SCG  HTAA+ 
Sbjct: 198 GDHSFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAALT 257

Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
           +  G            LFT+GDG+ GQLGHG     ++P  V         ++ACG   T
Sbjct: 258 KDGG------------LFTFGDGSWGQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHT 305

Query: 532 IALT-ATGQVFSMGSADYGQLGS 553
           +A   ++G V++ G   +GQLG+
Sbjct: 306 LAFVPSSGVVYAFGCNSHGQLGT 328



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 153/335 (45%), Gaps = 22/335 (6%)

Query: 317 IFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           +  WG    G+LG GVE + V  P+     +G  +  V CG  H+  +   G +YT G  
Sbjct: 1   MLCWGNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSN 60

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
                  GQ+      I  +V G ++  +I+ + CG  H+ A+   G+LF +G G  G L
Sbjct: 61  S-----CGQLGHDKAGISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQL 115

Query: 436 GHGDRSST-SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG 494
           G G   +T  +PR V+ L + +     CG  H  A+                +LFTWG  
Sbjct: 116 GLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALSR------------DGQLFTWGQN 163

Query: 495 AEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS 553
             GQLG G  EP ++ P  +K    I   ++  G   + AL+ +G VF  G    GQLG 
Sbjct: 164 TSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGL 223

Query: 554 PGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                +  P  I+  ++ + +  I+CG  H A ++    ++T+G G+ GQLGHG   ++ 
Sbjct: 224 NDKQDRAVPCHIK-FLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHGSTNSEL 282

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
            P  V  L   +V  + CG + T A     GV  A
Sbjct: 283 LPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVYA 317



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 129/266 (48%), Gaps = 26/266 (9%)

Query: 253 GDVFIWGEGLGNGL-LGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           G +F WG G G  L LG     V I          P++++         + CG++H V +
Sbjct: 102 GQLFAWGAGDGGQLGLGTTETTVRI----------PRLVKRLCDHRISQVMCGNQHCVAL 151

Query: 312 TKQGQIFSWGEGSGGKLGHGV-EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           ++ GQ+F+WG+ + G+LG G  E    +P  + +L G  +  +  G  H+ A++LSG ++
Sbjct: 152 SRDGQLFTWGQNTSGQLGLGKGEPSKLFPHPLKSLAGIPLAQITAGGDHSFALSLSGAVF 211

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            WG   +  G LG   +    +P  +   +   ++  I CG  HTAA+T  G LFTFGDG
Sbjct: 212 GWGK--NRAGQLGLNDKQDRAVPCHIKF-LRSQKVVYISCGDEHTAALTKDGGLFTFGDG 268

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
           ++G LGHG  +S  +PR V  L   +    +CG  HT A V            SS  ++ 
Sbjct: 269 SWGQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFVP-----------SSGVVYA 317

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVS 516
           +G  + GQLG G       P  VK S
Sbjct: 318 FGCNSHGQLGTGILGDARSPFPVKTS 343


>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
           garnettii]
          Length = 1050

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/324 (32%), Positives = 162/324 (50%), Gaps = 20/324 (6%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL   +I  VACGE
Sbjct: 36  VKEVACGGNHSVFLLEGGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93

Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            H+ A++  G L++WG G    LGL    +E S  +PR +  ++    I  + CG WH  
Sbjct: 94  SHSLALSDRGQLFSWGAGSDGQLGL--TTTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150

Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+ + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G  H+ A+     
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             SG+       +F WG    GQLG  D + R  P  VK+        ++CG   T  LT
Sbjct: 206 SLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
             G VF+ G+   GQLG      +   R    +    +  IACG  H +A V S   +Y 
Sbjct: 259 KNGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G GA GQLG G   N + P+ V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  ++  VACG  H+  +   G++YT G 
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEGGEVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 60  -LNTKGQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLTTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGSCGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 126/251 (50%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LTTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG  ++N G LG   E     P  V   +   ++  I CG  HTA +T  G +FTFG G+
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKNGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA GQLG G
Sbjct: 320 GCGARGQLGTG 330



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 13/199 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG+   +G LG    G E  S        P+ + S   +    +A G  H+  ++
Sbjct: 156 GQFFTWGKN-SHGQLG---LGKEFPSQAS-----PQRVRSLEGIPLAQVAAGGAHSFALS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG  + G+LG   E D   P  +  L    +  ++CGE HT  +T +G ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKNGGVFTF 266

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G  + G LG  S      PR+V  ++ G +++ I CG  HT A + S+G ++ FG G 
Sbjct: 267 GAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323

Query: 432 FGALGHGDRSSTSVPREVE 450
            G LG G   +   P  V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342



 Score = 62.8 bits (151), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 35/165 (21%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGV 274
           G+  A   +  A SF +SLS                  G VF WG            N  
Sbjct: 189 GIPLAQVAAGGAHSFALSLS------------------GAVFGWGMN----------NAG 220

Query: 275 EISSADRRDALLP---KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG 331
           ++  +D +D   P   K+L +  V+    I+CG +H  ++TK G +F++G GS G+LGH 
Sbjct: 221 QLGLSDEKDRESPCHVKLLRTQKVV---YISCGEEHTAVLTKNGGVFTFGAGSCGQLGHD 277

Query: 332 VEADVSYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDG 375
              D   P+ +  L GS +  +ACG  HT A V  SG +Y +G G
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322


>gi|297797029|ref|XP_002866399.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297312234|gb|EFH42658.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 445

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 179/357 (50%), Gaps = 58/357 (16%)

Query: 316 QIFSWGEGSGGKLGHGVE---------------ADVSY-----PKLIDALNGSNIHMVAC 355
           Q+FSWG G+ G+LG G+E               +D S+     P  IDA + S    ++C
Sbjct: 49  QLFSWGRGASGQLGGGIEEIRMYPSPVANLLLRSDQSFSLAQTPGRIDAESSSFPIGISC 108

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
           G FH+  +T+ GDL+ WG G  + G LG   E S ++P  ++   E   I  I  G  H+
Sbjct: 109 GLFHS-GLTIDGDLWIWGKG--DGGRLGFGQENSVFVP-NLNPLFEEHSIRCIALGGLHS 164

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK-TVMASCGVWHTAAIVEVA 474
            A+T  G +FT+G G FGALGH   +   VPR V+   + K + +A+ G  HTAAI E  
Sbjct: 165 VALTHQGDVFTWGYGGFGALGHKVYTRELVPRCVDGSWDCKISAIATSGT-HTAAITE-- 221

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQL------------GHGDAEP-RVVPLCVKVSDDISF 521
                     S +L+ WG   EG              G G + P +V  L V V+     
Sbjct: 222 ----------SGELYMWGR-EEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVA----- 265

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
             V+CG   T+ALT  GQ+++ G+    +LG   + G +      ++    I  IACG Y
Sbjct: 266 -SVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPLPVPSLDSVRITQIACGGY 324

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           H   ++ + +V +WG G +GQLG+    N++ PT +EAL DK++  + CG + +AAI
Sbjct: 325 HSLALTKEGKVLSWGHGGHGQLGNSSLRNQKIPTEIEALADKKIVFIACGGSSSAAI 381



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 131/412 (31%), Positives = 195/412 (47%), Gaps = 47/412 (11%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK-----VLESTVVLDAQS------IAC 303
           +F WG G  +G LGG +  + +  +   + LL       + ++   +DA+S      I+C
Sbjct: 50  LFSWGRG-ASGQLGGGIEEIRMYPSPVANLLLRSDQSFSLAQTPGRIDAESSSFPIGISC 108

Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAV 363
           G  H+ L T  G ++ WG+G GG+LG G E  V  P L       +I  +A G  H+ A+
Sbjct: 109 GLFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVAL 167

Query: 364 TLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGK 423
           T  GD++TWG G    G LG        +PR V G  +  +IS+I     HTAAIT +G+
Sbjct: 168 THQGDVFTWGYG--GFGALGHKVYTRELVPRCVDGSWD-CKISAIATSGTHTAAITESGE 224

Query: 424 LFTFG-------DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           L+ +G        G     G  +    SVP +V+ L  +     SCG + T A+ +    
Sbjct: 225 LYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTK---- 279

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
                     +L+ WG  +  +LG GD      PL V   D +   ++ACG   ++ALT 
Sbjct: 280 --------EGQLWNWGANSNYELGRGDNLGGWEPLPVPSLDSVRITQIACGGYHSLALTK 331

Query: 537 TGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
            G+V S G   +GQLG S     K PT IE  +  + I  IACG    A ++   E++ W
Sbjct: 332 EGKVLSWGHGGHGQLGNSSLRNQKIPTEIEA-LADKKIVFIACGGSSSAAITDGGELWMW 390

Query: 596 GKGANGQLG-HGDNENKQTPTLVEALRDK------QVKSVVCGSNFTAAICL 640
           G   + QLG  G  E + TP  V  L ++      +V SV  G++   A+CL
Sbjct: 391 GNAKDFQLGVPGLPEIQTTPVEVNFLTEEDERQPHKVISVSIGASH--ALCL 440



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 131/466 (28%), Positives = 208/466 (44%), Gaps = 58/466 (12%)

Query: 143 TQKNSPSHVSSISSDLTNKDSGDTQPI---LVAYENSPQNRLGKAFSEVLSF-TAAAKAY 198
           TQ++S    + + +  T+ D  D+ PI   L ++      +LG    E+  + +  A   
Sbjct: 21  TQRSSGGATTKVPTLYTSPDI-DSDPITLQLFSWGRGASGQLGGGIEEIRMYPSPVANLL 79

Query: 199 TRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIW 258
            R++   +S +   + G  DA S      SF I +S        G  H      GD++IW
Sbjct: 80  LRSD---QSFSLAQTPGRIDAES-----SSFPIGISC-------GLFHSGLTIDGDLWIW 124

Query: 259 GEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIF 318
           G+G G  L  G  N V + +      L P   E ++    + IA G  H+V +T QG +F
Sbjct: 125 GKGDGGRLGFGQENSVFVPN------LNPLFEEHSI----RCIALGGLHSVALTHQGDVF 174

Query: 319 SWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW----GD 374
           +WG G  G LGH V      P+ +D      I  +A    HT A+T SG+LY W    GD
Sbjct: 175 TWGYGGFGALGHKVYTRELVPRCVDGSWDCKISAIATSGTHTAAITESGELYMWGREEGD 234

Query: 375 GIHNLGLLGQVSEISHW-IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
           G   LG     +E     +P KV      + ++S+ CG + T A+T  G+L+ +G  +  
Sbjct: 235 GRLGLGPGRGPNEGGGLSVPSKVKALT--VPVASVSCGGFFTMALTKEGQLWNWGANSNY 292

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
            LG GD      P  V +L  ++    +CG +H+ A+ +              K+ +WG 
Sbjct: 293 ELGRGDNLGGWEPLPVPSLDSVRITQIACGGYHSLALTK------------EGKVLSWGH 340

Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS 553
           G  GQLG+     + +P  ++   D     +ACG S + A+T  G+++  G+A   QLG 
Sbjct: 341 GGHGQLGNSSLRNQKIPTEIEALADKKIVFIACGGSSSAAITDGGELWMWGNAKDFQLGV 400

Query: 554 PGSTGKFPTRIEGNI--------KHRYIEDIACGSYHIAVVSSKSE 591
           PG      T +E N          H+ I  ++ G+ H   + S+S 
Sbjct: 401 PGLPEIQTTPVEVNFLTEEDERQPHKVI-SVSIGASHALCLVSRSH 445


>gi|282722854|gb|ADA84473.1| retinitis pigmentosa GTPase regulator protein 2 1-17 isoform [Danio
           rerio]
          Length = 708

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/340 (32%), Positives = 165/340 (48%), Gaps = 31/340 (9%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+CG +H  LVT+ G++F +G  + G+LG G +  V+ P  + AL    + + ACG  HT
Sbjct: 41  ISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHT 100

Query: 361 CAVTLSGDLYT-WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
              T  G+LY   G+    LGL       S  +    + Q     I  +  G   +AA+T
Sbjct: 101 LVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQGP---IKMLAAGSNTSAALT 157

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G+L+  GD + G +G G  S+   P+EV   K  +    SCG +H +A V V G    
Sbjct: 158 QDGRLYMRGDNSEGQIGLGKESNALTPQEVSVGK--RVFWVSCGYYH-SAFVTVDG---- 210

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
                   L+T+G+   G+LG      A  +V      + D +   +VACG   T+ALT 
Sbjct: 211 -------ALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRV--VQVACGGGHTVALTE 261

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH---RYIEDIACGSYHIAVVSSKSEVY 593
             +V+S G   +GQLG    T  F +R+   ++H     ++  ACG  H A+++    +Y
Sbjct: 262 N-EVYSFGLGQFGQLGH--GTFIFESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLY 318

Query: 594 TWGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCG 631
           T+G G +G+LG G+    N+  PTL     D  V SV CG
Sbjct: 319 TFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCG 358



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 5/119 (4%)

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
           +++CG   T  +T  G++F  GS ++GQLG    +T   PT ++  ++   ++  ACG  
Sbjct: 40  RISCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKA-LRSERVKLTACGRT 98

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ--VKSVVCGSNFTAAI 638
           H  V +S+  +Y  G    GQLG GD  ++ +  LVE   +KQ  +K +  GSN +AA+
Sbjct: 99  HTLVFTSRGNLYACGGNNEGQLGLGDCNDRTSFHLVEFF-NKQGPIKMLAAGSNTSAAL 156



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 2/83 (2%)

Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE--ADVSYPK 340
           ++ LP+V+E       +  ACG  H  L+T  G ++++G+G  GKLG G E   +   P 
Sbjct: 283 ESRLPRVVEHFRKGRVKHAACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPT 342

Query: 341 LIDALNGSNIHMVACGEFHTCAV 363
           L       ++H V CG  H   +
Sbjct: 343 LCPRFLDYHVHSVTCGGCHMLVL 365


>gi|449268693|gb|EMC79542.1| X-linked retinitis pigmentosa GTPase regulator, partial [Columba
           livia]
          Length = 719

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 166/343 (48%), Gaps = 37/343 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+CG +H  +VT  G+++ +G  + G+LG G +  VS P  + AL      +  CG  HT
Sbjct: 35  ISCGDEHTAIVTGNGKLYMFGSNNWGQLGLGSKNTVSKPTCVKALKPEKTKLAVCGRNHT 94

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
              T  G++Y  G        LG   E S +    +S      +I  +  G + +AA+T 
Sbjct: 95  LVYTEKGNVYAAGGNSEGQLGLGDTEERSTF--HLISFFTNQHKIKQLAAGSYTSAAVTE 152

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            G+LF +GD + G +G  D +  SVP +V+  K + ++  SCG +H+A I          
Sbjct: 153 DGQLFVWGDNSEGQIGLADEACVSVPCQVDVGKPVSSI--SCGYYHSALIT--------- 201

Query: 481 NGLSSKKLFTWGDGAEGQLG------HGDAEPRVVP-LCVKVSDDISFCKVACGHSITIA 533
                 +L+T+G+   G+LG        +  P+ VP +  KV+      KVACG   T+ 
Sbjct: 202 ---GDGELYTFGEPENGKLGLLPEQLKNNRVPQPVPGIMEKVN------KVACGGEHTVV 252

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH---RYIEDIACGSYHIAVVSSKS 590
           LT T  V++ G   YGQLG    T  F T +  ++KH     I +I CG  H AVV+   
Sbjct: 253 LTET-DVYTFGLGQYGQLGH--GTFIFETSVPKSVKHLRRHKICNITCGENHTAVVAENG 309

Query: 591 EVYTWGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCG 631
            ++T+G G +G+LG G+    N+  PTL        V  V CG
Sbjct: 310 LMFTFGDGRHGKLGLGEENYTNQFDPTLCYNFLRFTVLLVACG 352



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 119/207 (57%), Gaps = 20/207 (9%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + +A GS  +  VT+ GQ+F WG+ S G++G   EA VS P  +D   G  +  ++CG +
Sbjct: 138 KQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADEACVSVPCQVDV--GKPVSSISCGYY 195

Query: 359 HTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           H+  +T  G+LYT+G+  +  LGLL +  + ++ +P+ V G ME  +++ + CG  HT  
Sbjct: 196 HSALITGDGELYTFGEPENGKLGLLPEQLK-NNRVPQPVPGIME--KVNKVACGGEHTVV 252

Query: 418 ITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           +T    ++TFG G +G LGHG     TSVP+ V+ L+  K    +CG  HTA + E    
Sbjct: 253 LTET-DVYTFGLGQYGQLGHGTFIFETSVPKSVKHLRRHKICNITCGENHTAVVAE---- 307

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGD 503
               NGL    +FT+GDG  G+LG G+
Sbjct: 308 ----NGL----MFTFGDGRHGKLGLGE 326



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 136/293 (46%), Gaps = 25/293 (8%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL-NGSNIHMVACGEFHT 360
            CG  H ++ T++G +++ G  S G+LG G   + S   LI    N   I  +A G + +
Sbjct: 88  VCGRNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTNQHKIKQLAAGSYTS 147

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            AVT  G L+ WGD  ++ G +G   E    +P +V     G  +SSI CG +H+A IT 
Sbjct: 148 AAVTEDGQLFVWGD--NSEGQIGLADEACVSVPCQVD---VGKPVSSISCGYYHSALITG 202

Query: 421 AGKLFTFGDGTFGALG--HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
            G+L+TFG+   G LG       +  VP+ V  + E K    +CG  HT  + E      
Sbjct: 203 DGELYTFGEPENGKLGLLPEQLKNNRVPQPVPGIME-KVNKVACGGEHTVVLTET----- 256

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTAT 537
                    ++T+G G  GQLGHG       VP  VK       C + CG + T  +   
Sbjct: 257 --------DVYTFGLGQYGQLGHGTFIFETSVPKSVKHLRRHKICNITCGENHTAVVAEN 308

Query: 538 GQVFSMGSADYGQ--LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
           G +F+ G   +G+  LG    T +F   +  N     +  +ACG  H+ V ++
Sbjct: 309 GLMFTFGDGRHGKLGLGEENYTNQFDPTLCYNFLRFTVLLVACGGCHMLVFAA 361



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 139/292 (47%), Gaps = 25/292 (8%)

Query: 352 MVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCG 411
           +++CG+ HT  VT +G LY +G   +N G LG  S+ +   P  V   ++  +     CG
Sbjct: 34  LISCGDEHTAIVTGNGKLYMFGS--NNWGQLGLGSKNTVSKPTCVKA-LKPEKTKLAVCG 90

Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL-KELKTVMASCGVWHTAAI 470
             HT   T  G ++  G  + G LG GD    S    +     + K    + G + +AA+
Sbjct: 91  RNHTLVYTEKGNVYAAGGNSEGQLGLGDTEERSTFHLISFFTNQHKIKQLAAGSYTSAAV 150

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
            E              +LF WGD +EGQ+G  D     VP  V V   +S   ++CG+  
Sbjct: 151 TE------------DGQLFVWGDNSEGQIGLADEACVSVPCQVDVGKPVS--SISCGYYH 196

Query: 531 TIALTATGQVFSMGSADYGQLG---SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
           +  +T  G++++ G  + G+LG         + P  + G ++   +  +ACG  H  VV 
Sbjct: 197 SALITGDGELYTFGEPENGKLGLLPEQLKNNRVPQPVPGIMEK--VNKVACGGEH-TVVL 253

Query: 588 SKSEVYTWGKGANGQLGHGDN-ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           ++++VYT+G G  GQLGHG        P  V+ LR  ++ ++ CG N TA +
Sbjct: 254 TETDVYTFGLGQYGQLGHGTFIFETSVPKSVKHLRRHKICNITCGENHTAVV 305



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 93/223 (41%), Gaps = 27/223 (12%)

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +  +G +FTFG   F         +  +P +    K  K V+ SCG  HTA +       
Sbjct: 3   VLESGAVFTFGKSRF---------AEDIPSKF-WFKNDKPVLISCGDEHTAIVT------ 46

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
              NG    KL+ +G    GQLG G       P CVK           CG + T+  T  
Sbjct: 47  --GNG----KLYMFGSNNWGQLGLGSKNTVSKPTCVKALKPEKTKLAVCGRNHTLVYTEK 100

Query: 538 GQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
           G V++ G    GQLG  G T +  T   I        I+ +A GSY  A V+   +++ W
Sbjct: 101 GNVYAAGGNSEGQLGL-GDTEERSTFHLISFFTNQHKIKQLAAGSYTSAAVTEDGQLFVW 159

Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G  + GQ+G  D      P  V+    K V S+ CG   +A I
Sbjct: 160 GDNSEGQIGLADEACVSVPCQVDV--GKPVSSISCGYYHSALI 200



 Score = 40.4 bits (93), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDALNGSNIHMVACGE 357
           +I CG  H  +V + G +F++G+G  GKLG G E   +   P L        + +VACG 
Sbjct: 294 NITCGENHTAVVAENGLMFTFGDGRHGKLGLGEENYTNQFDPTLCYNFLRFTVLLVACGG 353

Query: 358 FH 359
            H
Sbjct: 354 CH 355


>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
          Length = 1014

 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 172/343 (50%), Gaps = 27/343 (7%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G +H++L+   G++ S+G+ S G+LG         PK I AL    + +V+CG+ H+ 
Sbjct: 29  ASGERHSLLLLSNGELHSYGDNSHGQLGRRDVQRQEQPKRIPALETLRVDLVSCGKEHSL 88

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV   G ++ WG G      +G+ +EI + IPRK+   +  ++I  + CG  H+ A++  
Sbjct: 89  AVCYKGRVFAWGAGSEGQLGIGEFNEI-NLIPRKIK-TLTDIKIIQVSCGHHHSLALSED 146

Query: 422 GKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           G+LFT+G  + G LG G    S + P+ V+ L  +     + G  H+ A+       SG+
Sbjct: 147 GRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLTQVAAGGAHSFAL-----SLSGA 201

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVV----PLCVKVSDDISFCKVACGHSITIALTA 536
           +       F WG  +EGQL        VV    P  V   +++    ++CG+  T  LT 
Sbjct: 202 S-------FGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYISCGYEHTAVLTQ 254

Query: 537 TGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
           TG+VF+ G   YGQLG SP +  + P  +EG      +  I CGSYH +A V +  +V +
Sbjct: 255 TGKVFTFGGNSYGQLGYSPTAGKEGPQLVEG--IDGLVSQIDCGSYHTLAYVYTTGKVVS 312

Query: 595 WGKG--ANGQLGHGDNENKQTPTLVEA--LRDKQVKSVVCGSN 633
           +G+G        H +   +    L+ A  L D +VK +  G++
Sbjct: 313 FGRGPCCKSSPTHPEAPTENFTCLISADDLVDFEVKHIFAGTH 355



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 155/304 (50%), Gaps = 24/304 (7%)

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
           G+ +   A GE H+  +  +G+L+++GD  H  G LG+        P+++   +E L++ 
Sbjct: 22  GAELRQAASGERHSLLLLSNGELHSYGDNSH--GQLGRRDVQRQEQPKRIPA-LETLRVD 78

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS-VPREVETLKELKTVMASCGVW 465
            + CG  H+ A+   G++F +G G+ G LG G+ +  + +PR+++TL ++K +  SCG  
Sbjct: 79  LVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTLTDIKIIQVSCGHH 138

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP-RVVPLCVKVSDDISFCKV 524
           H+ A+ E              +LFTWG  + GQLG G   P +  P  V+  D I   +V
Sbjct: 139 HSLALSE------------DGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLTQV 186

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLG-----SPGSTGKFPTRIEGNIKHRYIEDIACG 579
           A G + + AL+ +G  F  GS   GQL       P      P  ++  +++  +  I+CG
Sbjct: 187 AAGGAHSFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDA-LENLGVVYISCG 245

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
             H AV++   +V+T+G  + GQLG+     K+ P LVE + D  V  + CGS  T A  
Sbjct: 246 YEHTAVLTQTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEGI-DGLVSQIDCGSYHTLAYV 304

Query: 640 LHKG 643
              G
Sbjct: 305 YTTG 308



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 126/263 (47%), Gaps = 27/263 (10%)

Query: 222 RSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADR 281
           R    ++ R+ L S     S   C++     G VF WG G    L  G  N +       
Sbjct: 68  RIPALETLRVDLVSCGKEHSLAVCYK-----GRVFAWGAGSEGQLGIGEFNEIN------ 116

Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA-DVSYPK 340
              L+P+ +++   +    ++CG  H++ +++ G++F+WG  S G+LG G E    + P+
Sbjct: 117 ---LIPRKIKTLTDIKIIQVSCGHHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQ 173

Query: 341 LIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ- 399
            +  L+G  +  VA G  H+ A++LSG  + WG         GQ++     +P   S + 
Sbjct: 174 RVQFLDGIPLTQVAAGGAHSFALSLSGASFGWGSNSE-----GQLALRKKNVPVVQSSKP 228

Query: 400 -----MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
                +E L +  I CG  HTA +T  GK+FTFG  ++G LG+   +    P+ VE +  
Sbjct: 229 CSVDALENLGVVYISCGYEHTAVLTQTGKVFTFGGNSYGQLGYSPTAGKEGPQLVEGIDG 288

Query: 455 LKTVMASCGVWHTAAIVEVAGKT 477
           L + +  CG +HT A V   GK 
Sbjct: 289 LVSQI-DCGSYHTLAYVYTTGKV 310



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 134/265 (50%), Gaps = 23/265 (8%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDAL 345
           PK + +   L    ++CG +H++ V  +G++F+WG GS G+LG G   +++  P+ I  L
Sbjct: 66  PKRIPALETLRVDLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFNEINLIPRKIKTL 125

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGLQ 404
               I  V+CG  H+ A++  G L+TWG   H  G LG   E  S   P++V   ++G+ 
Sbjct: 126 TDIKIIQVSCGHHHSLALSEDGRLFTWGSNSH--GQLGLGKECPSQASPQRVQF-LDGIP 182

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS----STSVPREVETLKELKTVMA 460
           ++ +  G  H+ A++ +G  F +G  + G L    ++     +S P  V+ L+ L  V  
Sbjct: 183 LTQVAAGGAHSFALSLSGASFGWGSNSEGQLALRKKNVPVVQSSKPCSVDALENLGVVYI 242

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
           SCG  HTA + +              K+FT+G  + GQLG+     +  P  V+  D + 
Sbjct: 243 SCGYEHTAVLTQTG------------KVFTFGGNSYGQLGYSPTAGKEGPQLVEGIDGL- 289

Query: 521 FCKVACGHSITIA-LTATGQVFSMG 544
             ++ CG   T+A +  TG+V S G
Sbjct: 290 VSQIDCGSYHTLAYVYTTGKVVSFG 314


>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2353

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 161/338 (47%), Gaps = 28/338 (8%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           +++S G+ S G+LGHG  A     + I AL    I  +  G  HT  +T  G ++T G  
Sbjct: 563 EVWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYN 622

Query: 376 IHNLGLLGQVSEISHW--IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
            +     G  + +SH   IP+  SG  +    +    G  HT  +++ G++ T G    G
Sbjct: 623 DNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYN----GCEHTILVSTDGRVATCGYNYRG 678

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
            LGHG+ +S SVP+ + +L+     + SC  +HT    E        +G + + L+T+G 
Sbjct: 679 QLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACE--------DG-NLQNLYTFGR 729

Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS 553
              GQLGH D+  R +P  V+   D     VACG   T+ +TA+G+ F+ G  DYGQLG 
Sbjct: 730 NDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGI 789

Query: 554 PGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                +  P ++ G ++ +   +I CG YH   + S + ++ +G+   GQLG G +    
Sbjct: 790 DTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASS 849

Query: 613 TPT------------LVEALRDKQVKSVVCGSNFTAAI 638
           T              L++ L  K +  + CG   T A+
Sbjct: 850 TSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAV 887



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 162/355 (45%), Gaps = 32/355 (9%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN-GSNIHMVACGEFH 359
           I  G++H V++T  G++F+ G    G+ G G  A VS+   I  ++ GS+      G  H
Sbjct: 600 IGAGNEHTVVLTADGKVFTCGYNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEH 659

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           T  V+  G + T G      G LG  +  S  +P K+   +E   +  + C  +HT    
Sbjct: 660 TILVSTDGRVATCGYNYR--GQLGHGNTTSESVP-KIIRSLENKIVRLVSCSYYHTVLAC 716

Query: 420 SAGKL---FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
             G L   +TFG   +G LGH D     +P+ VE L + + V  +CG +HT  +      
Sbjct: 717 EDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVT----- 771

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC-KVACGHSITIALT 535
                  +S K F +G    GQLG    E ++ P+ V+   +   C ++ CG+  TIAL 
Sbjct: 772 -------ASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALC 824

Query: 536 ATGQVFSMGSADYGQLG----SPGSTGKFP--------TRIEGNIKHRYIEDIACGSYHI 583
           +   +F+ G  DYGQLG    +  ST             R+   ++ + I  IACG YH 
Sbjct: 825 SGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHT 884

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             VS    +Y +G+  +GQLG GD   +  P  ++    K+V  V  G   T  +
Sbjct: 885 IAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRVALVAAGFYHTVVL 939



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 144/305 (47%), Gaps = 33/305 (10%)

Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAV 363
           G +H +LV+  G++ + G    G+LGHG     S PK+I +L    + +V+C  +HT   
Sbjct: 656 GCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLA 715

Query: 364 TLSG---DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
              G   +LYT+G   ++ G LG    I   IP+ V   +   QI S+ CG +HT  +T+
Sbjct: 716 CEDGNLQNLYTFGR--NDYGQLGHNDSIDRKIPQFVEA-LSDQQIVSVACGQYHTMVVTA 772

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVE-TLKELKTVMASCGVWHTAAIVEVAGKTSG 479
           +GK F FG   +G LG     +   P +V   L+  + +   CG +HT A+         
Sbjct: 773 SGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALC-------- 824

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC---------VKVSDDI---SFCKVACG 527
               S   LF +G    GQLG G +                  ++ D++      ++ACG
Sbjct: 825 ----SGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACG 880

Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVV 586
              TIA++  G ++  G  ++GQLG+  +T + +P  I+  +  R +  +A G YH  V+
Sbjct: 881 CYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKR-VALVAAGFYHTVVL 939

Query: 587 SSKSE 591
           +   E
Sbjct: 940 TGGKE 944



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 123/265 (46%), Gaps = 29/265 (10%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQG---QIFSWGEGSGGKLGHGVEADVSYPKLI 342
           +PK++ S      + ++C   H VL  + G    ++++G    G+LGH    D   P+ +
Sbjct: 690 VPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFV 749

Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
           +AL+   I  VACG++HT  VT SG  + +G   ++ G LG  +  +   P +V G +E 
Sbjct: 750 EALSDQQIVSVACGQYHTMVVTASGKAFAFGK--NDYGQLGIDTMENQLAPVQVRGGLER 807

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV------------PREVE 450
            +   I CG +HT A+ S   LF FG   +G LG G  +++S              R ++
Sbjct: 808 QECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLID 867

Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
            L+    V  +CG +HT A+          NG+    ++ +G    GQLG GD   RV P
Sbjct: 868 ELEGKDIVRIACGCYHTIAV--------SDNGV----MYVFGRNNHGQLGTGDTTERVYP 915

Query: 511 LCVKVSDDISFCKVACGHSITIALT 535
             +          VA G   T+ LT
Sbjct: 916 FPIDDFVGKRVALVAAGFYHTVVLT 940



 Score = 82.0 bits (201), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 12/217 (5%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVE 333
           ++   D  D  +P+ +E+       S+ACG  H ++VT  G+ F++G+   G+LG   +E
Sbjct: 734 QLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTME 793

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEIS---- 389
             ++  ++   L       + CG +HT A+     L+ +G   +    LG+ +  S    
Sbjct: 794 NQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNL 853

Query: 390 -----HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS 444
                 +   ++  ++EG  I  I CG +HT A++  G ++ FG    G LG GD +   
Sbjct: 854 QLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERV 913

Query: 445 VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            P  ++     +  + + G +HT  +V   GK    N
Sbjct: 914 YPFPIDDFVGKRVALVAAGFYHT--VVLTGGKEDDKN 948



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 11/160 (6%)

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
           +++++ G  + G+LGHGD   R     ++        ++  G+  T+ LTA G+VF+ G 
Sbjct: 562 REVWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGY 621

Query: 546 ADYGQLGSPGST-----GKFPTRIEGNIK-HRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
            D GQ G  G+       + P    G+ + H Y      G  H  +VS+   V T G   
Sbjct: 622 NDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAY-----NGCEHTILVSTDGRVATCGYNY 676

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            GQLGHG+  ++  P ++ +L +K V+ V C    T   C
Sbjct: 677 RGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLAC 716


>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
          Length = 1057

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 165/337 (48%), Gaps = 30/337 (8%)

Query: 317 IFSWGEGSGGKLGHGVEAD--VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           ++ WG    G+LG G   D  V  P+ +D  + S++   ACG  HT  +T  G L++ G+
Sbjct: 3   VYCWGNTVHGELGLGGIEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGN 62

Query: 375 GIHNLGLLGQVSEISHWIPRK---VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
             H     GQ+   +  +P K       +E   ++ + CG  H+ A+T+ G++F++G  +
Sbjct: 63  NDH-----GQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWGSNS 117

Query: 432 FGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            G LGH  D  + + PR ++T+     V  + G +H+ A+             +S +LF+
Sbjct: 118 IGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALT------------NSGELFS 165

Query: 491 WGDGAEGQLGHGDAEPRVV-PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
           WG    GQLG G    +VV P  VK    I    +ACG + + A++ +G +F  G   +G
Sbjct: 166 WGANGYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFG 225

Query: 550 QLGSPGSTGK-FPTRIEG--NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
           QLG      + FP +++   N+  RYI   +CG    A ++ +  V+T G G  GQLGHG
Sbjct: 226 QLGLNDLVSRCFPQQLKTLRNLGVRYI---SCGDDFSAFLTQEGGVFTCGAGTFGQLGHG 282

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
              N+  P +V  L   ++  + CG   T A    +G
Sbjct: 283 TCSNEILPRMVFELMGSKITQIACGRRHTLAFVPSRG 319



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 181/366 (49%), Gaps = 25/366 (6%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           V+ WG  + +G LG  + G+E         LLP+ ++       Q  ACG+ H +L+TK 
Sbjct: 3   VYCWGNTV-HGELG--LGGIE-----DEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKD 54

Query: 315 GQIFSWGEGSGGKLGHGVEADVS-YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           G++FS G    G+LGH  +   +  P+ I +L    +  V+CG  H+ A+T  G +++WG
Sbjct: 55  GKLFSCGNNDHGQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWGQVFSWG 114

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
              +++G LG  +++  +   ++   +    +  I  G +H+ A+T++G+LF++G   +G
Sbjct: 115 S--NSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGANGYG 172

Query: 434 ALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            LG G      V P  V++L  +     +CG  H+ A+ +            S  +F WG
Sbjct: 173 QLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVSK------------SGAIFGWG 220

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
               GQLG  D   R  P  +K   ++    ++CG   +  LT  G VF+ G+  +GQLG
Sbjct: 221 KNTFGQLGLNDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLG 280

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENK 611
               + +   R+   +    I  IACG  H +A V S+ ++Y +G G  GQLG G   N 
Sbjct: 281 HGTCSNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGVGVISNY 340

Query: 612 QTPTLV 617
            TP +V
Sbjct: 341 NTPQIV 346



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 140/284 (49%), Gaps = 26/284 (9%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSI---CCGPWHTAAITSAGKLF 425
           +Y WG+ +H    LG + +    +PR    +M+    SS+    CG  HT  +T  GKLF
Sbjct: 3   VYCWGNTVHGELGLGGIEDEQVLLPR----EMDWCHSSSVQQAACGTSHTLLLTKDGKLF 58

Query: 426 TFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           + G+   G LGH  D      P+ + +L+       SCG  H+ A+              
Sbjct: 59  SCGNNDHGQLGHDTDCLPNKRPQFISSLENYIVTHVSCGTTHSLALTNWG---------- 108

Query: 485 SKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
             ++F+WG  + GQLGH  D +    P  +K     +  ++A G   ++ALT +G++FS 
Sbjct: 109 --QVFSWGSNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSW 166

Query: 544 GSADYGQLGSPGSTGK---FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
           G+  YGQLG  G+TG+    PT ++ ++    I  IACG  H   VS    ++ WGK   
Sbjct: 167 GANGYGQLGL-GTTGEKVVTPTLVK-SLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTF 224

Query: 601 GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           GQLG  D  ++  P  ++ LR+  V+ + CG +F+A +    GV
Sbjct: 225 GQLGLNDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGV 268



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 116/242 (47%), Gaps = 14/242 (5%)

Query: 237 VSSSSQGSCHE-DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVV 295
           V+  S G+ H       G VF WG     G LG           D +    P+++++   
Sbjct: 91  VTHVSCGTTHSLALTNWGQVFSWGSN-SIGQLG--------HDTDLQTYTTPRMIKTIAT 141

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVA 354
                IA G  H++ +T  G++FSWG    G+LG G   + V  P L+ +L G  I  +A
Sbjct: 142 KTVVQIASGQFHSLALTNSGELFSWGANGYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIA 201

Query: 355 CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
           CG  H+ AV+ SG ++ WG   +  G LG    +S   P+++   +  L +  I CG   
Sbjct: 202 CGGNHSFAVSKSGAIFGWGK--NTFGQLGLNDLVSRCFPQQLK-TLRNLGVRYISCGDDF 258

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           +A +T  G +FT G GTFG LGHG  S+  +PR V  L   K    +CG  HT A V   
Sbjct: 259 SAFLTQEGGVFTCGAGTFGQLGHGTCSNEILPRMVFELMGSKITQIACGRRHTLAFVPSR 318

Query: 475 GK 476
           GK
Sbjct: 319 GK 320


>gi|326670703|ref|XP_003199276.1| PREDICTED: hypothetical protein LOC571327 [Danio rerio]
          Length = 1698

 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 167/346 (48%), Gaps = 42/346 (12%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+CG  H+  VT+QG++F +G+ + G+LG  ++  V+ P  +  L G     VACG  HT
Sbjct: 39  ISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDHT 98

Query: 361 CAVTLSGDLYTWG---DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
              T  G++   G   DG   LG            P       +   I  +  G   +AA
Sbjct: 99  LVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPF-----CDYAPIKLLSAGDHTSAA 153

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +T  G+LF +GD + G LG G+ S   +P+E+   + +  V  SCG  H+A + +     
Sbjct: 154 LTEDGRLFLWGDNSAGQLGFGNDSHALLPKELNMGQSIHWV--SCGYRHSALVTD----- 206

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
                  S  ++++G+ A+G+LG    +        +V    S  +VACG   T+ALT  
Sbjct: 207 -------SGDVYSFGESADGRLGLSAHQLANHSYPQRVESLHSVLQVACGGKHTLALTE- 258

Query: 538 GQVFSMGSADYGQLG---------SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
            +++  G  ++GQLG         SP + G F    +G + H     + CG  H A+++ 
Sbjct: 259 DELYCFGGGEFGQLGLGTLVFVADSPVAVGHF---RKGRVTH-----VTCGEQHSALITD 310

Query: 589 KSEVYTWGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCGS 632
              +YT+G G +G+LGHGD    N+ TPT+ +   +  V +V CGS
Sbjct: 311 SGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGS 356



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 168/358 (46%), Gaps = 53/358 (14%)

Query: 243 GSCHEDF-DGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
           G  H  F    G +F++G+    G LG  + G           +  KVL+      AQS+
Sbjct: 42  GQSHSAFVTEQGRLFVFGDN-NRGQLGLQIKGPVTK------PVCVKVLKGE---RAQSV 91

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACGEFHT 360
           ACG+ H ++ T QG+I + G  S G+LG G   D +S+ +L    + + I +++ G+  +
Sbjct: 92  ACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHTS 151

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T  G L+ WGD  ++ G LG  ++    +P++++    G  I  + CG  H+A +T 
Sbjct: 152 AALTEDGRLFLWGD--NSAGQLGFGNDSHALLPKELNM---GQSIHWVSCGYRHSALVTD 206

Query: 421 AGKLFTFG---DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +G +++FG   DG  G   H   ++ S P+ VE+L  +  +  +CG  HT A+ E     
Sbjct: 207 SGDVYSFGESADGRLGLSAH-QLANHSYPQRVESLHSV--LQVACGGKHTLALTE----- 258

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHG------DAEPRVVPLCVKVSDDISFCKVACGHSIT 531
                    +L+ +G G  GQLG G      D+     P+ V          V CG   +
Sbjct: 259 --------DELYCFGGGEFGQLGLGTLVFVADS-----PVAVGHFRKGRVTHVTCGEQHS 305

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIE----DIACGSYHIAV 585
             +T +G +++ G   +G+LG       F  +    +  R+ E     +ACGS H+ V
Sbjct: 306 ALITDSGLLYTFGDGRHGKLGH--GDENFTNQFTPTVCQRFFEYSVMTVACGSSHMLV 361


>gi|260786461|ref|XP_002588276.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
 gi|229273436|gb|EEN44287.1| hypothetical protein BRAFLDRAFT_124709 [Branchiostoma floridae]
          Length = 1914

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 142/306 (46%), Gaps = 35/306 (11%)

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
           I  VA G  H   V +   +YTWG+G  + G LG    +    P  V   ++G  I   C
Sbjct: 643 IRQVAVGLEHMVVVAMERAVYTWGEG--SKGQLGHGDLLGRSKPEMVEA-LKGKSIVRAC 699

Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA 469
           CG   +  ++  G + T GDG+ G LGHGD  S S PR +E L  +     SCG  H  A
Sbjct: 700 CGDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLLSVDVRAISCGPHHVVA 759

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHS 529
           +        GS+G    ++F WG G  G LG GD E    P  V++S+ +   +V CG  
Sbjct: 760 V--------GSDG----EVFAWGRGKHGCLGLGDEEDHFSPQEVQISEPVFIREVKCGVD 807

Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTG-----------------KFPTRIEGNIKHRY 572
            T+ LT  G V + G+ +  +LG     G                 K PT +     HR 
Sbjct: 808 GTMFLTDMGSVLACGNNENNKLGLNHRQGFLRAMKNLLQKVEVPGRKVPTVVRALTNHRA 867

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL--RDKQVKSVVC 630
           I D+A G +H +V+    +VYT+G+   GQLG G  + +  P  V+ L   DK V  + C
Sbjct: 868 I-DMAVGPHHTSVLVEPGKVYTFGRNLEGQLGTGHTKPRDAPMEVKDLSISDKTVTMLAC 926

Query: 631 GSNFTA 636
           G  FTA
Sbjct: 927 GDMFTA 932



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 155/316 (49%), Gaps = 14/316 (4%)

Query: 290 LESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN 349
           +E    +  + +A G +H V+V  +  +++WGEGS G+LGHG     S P++++AL G +
Sbjct: 635 IELPAKIKIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKPEMVEALKGKS 694

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
           I    CG+  +  V+ +G + T GDG +  G LG    +S   PR +   +  + + +I 
Sbjct: 695 IVRACCGDGFSVFVSDNGIVMTCGDGSN--GCLGHGDWMSASRPRLIEPLL-SVDVRAIS 751

Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA 469
           CGP H  A+ S G++F +G G  G LG GD      P+EV+  + +      CGV  T  
Sbjct: 752 CGPHHVVAVGSDGEVFAWGRGKHGCLGLGDEEDHFSPQEVQISEPVFIREVKCGVDGTMF 811

Query: 470 IVEVAGKTSGSN------GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
           + ++    +  N      GL+ ++ F      +  L   +   R VP  V+   +     
Sbjct: 812 LTDMGSVLACGNNENNKLGLNHRQGFLR--AMKNLLQKVEVPGRKVPTVVRALTNHRAID 869

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEG-NIKHRYIEDIACGSY 581
           +A G   T  L   G+V++ G    GQLG+  +  +  P  ++  +I  + +  +ACG  
Sbjct: 870 MAVGPHHTSVLVEPGKVYTFGRNLEGQLGTGHTKPRDAPMEVKDLSISDKTVTMLACGDM 929

Query: 582 HIAV-VSSKSEVYTWG 596
             AV ++S++ ++ WG
Sbjct: 930 FTAVGINSENALFFWG 945



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 139/318 (43%), Gaps = 60/318 (18%)

Query: 255 VFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIA---CGSKH 307
           V+ WGEG    LG+G L G                 P+++E+   L  +SI    CG   
Sbjct: 662 VYTWGEGSKGQLGHGDLLGRSK--------------PEMVEA---LKGKSIVRACCGDGF 704

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
           +V V+  G + + G+GS G LGHG     S P+LI+ L   ++  ++CG  H  AV   G
Sbjct: 705 SVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLLSVDVRAISCGPHHVVAVGSDG 764

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           +++ WG G H  G LG   E  H+ P++V    E + I  + CG   T  +T  G +   
Sbjct: 765 EVFAWGRGKH--GCLGLGDEEDHFSPQEVQIS-EPVFIREVKCGVDGTMFLTDMGSVLAC 821

Query: 428 GDGTFGALGHGDRS----------------STSVPREVETLKELKTVMASCGVWHTAAIV 471
           G+     LG   R                    VP  V  L   + +  + G  HT+ +V
Sbjct: 822 GNNENNKLGLNHRQGFLRAMKNLLQKVEVPGRKVPTVVRALTNHRAIDMAVGPHHTSVLV 881

Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK---VSDDISFCKVACGH 528
           E              K++T+G   EGQLG G  +PR  P+ VK   +SD  +   +ACG 
Sbjct: 882 EPG------------KVYTFGRNLEGQLGTGHTKPRDAPMEVKDLSISDK-TVTMLACGD 928

Query: 529 SIT-IALTATGQVFSMGS 545
             T + + +   +F  G+
Sbjct: 929 MFTAVGINSENALFFWGT 946



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 11/95 (11%)

Query: 561 PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           P  +   IK   I  +A G  H+ VV+ +  VYTWG+G+ GQLGHGD   +  P +VEAL
Sbjct: 634 PIELPAKIK---IRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKPEMVEAL 690

Query: 621 RDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGC 655
           + K +    CG  F+        V ++D+ I   C
Sbjct: 691 KGKSIVRACCGDGFS--------VFVSDNGIVMTC 717



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 56/126 (44%)

Query: 513 VKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY 572
           +++   I   +VA G    + +     V++ G    GQLG     G+    +   +K + 
Sbjct: 635 IELPAKIKIRQVAVGLEHMVVVAMERAVYTWGEGSKGQLGHGDLLGRSKPEMVEALKGKS 694

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
           I    CG      VS    V T G G+NG LGHGD  +   P L+E L    V+++ CG 
Sbjct: 695 IVRACCGDGFSVFVSDNGIVMTCGDGSNGCLGHGDWMSASRPRLIEPLLSVDVRAISCGP 754

Query: 633 NFTAAI 638
           +   A+
Sbjct: 755 HHVVAV 760


>gi|403332050|gb|EJY65013.1| hypothetical protein OXYTRI_14837 [Oxytricha trifallax]
 gi|403356523|gb|EJY77858.1| hypothetical protein OXYTRI_00501 [Oxytricha trifallax]
          Length = 489

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 172/375 (45%), Gaps = 45/375 (12%)

Query: 289 VLESTVVLDAQSIACGSKHAVLVTKQGQIF-SWGEGSGGKLGHGVEA-DVSYPKLIDALN 346
           ++    +L  QS++   ++A    KQ ++  SWG G  G+LG+G E   +S P  +  L+
Sbjct: 70  LIGGMFLLKNQSMSFKLQNAECDAKQQKLLLSWGNGQNGQLGNGNETLSLSIPSPVQVLS 129

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH----WIPRKVSGQMEG 402
             +I  V      + AVT  G +YTWG      G L Q   +S      +P  +      
Sbjct: 130 DEDIIQVNASGDISAAVTSQGQIYTWGK--TRGGSLSQQKSLSRATNLLLPTLIVAPE-- 185

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG------DRSSTSVPREVE------ 450
           +Q   + CG  H A +T  GKL T+G+   G LGH        ++ +  PR         
Sbjct: 186 VQFVQVACGKTHLAGVTKDGKLITWGNPDQGKLGHNAQLQQESKNKSYSPRSYADYNAIN 245

Query: 451 ----TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP 506
                L+  K + ASCG  HTA + +              +++TWG G  G LGHG+ + 
Sbjct: 246 FVGGALESKKIIQASCGFQHTACLTQ------------DGEVYTWGFGKNGALGHGNWDQ 293

Query: 507 RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGST-GKFPTRIE 565
             V L  KV    +  K+ CG   T AL   G ++S GS  YGQLG+  S   K    I+
Sbjct: 294 --VDLPKKVEGLSNIVKIDCGMDYTFALDKDGNIYSWGSNRYGQLGTTQSNINKHNVPIQ 351

Query: 566 GNIKH--RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDK 623
             + H   ++ DI+CG  H A ++ K E + WG G +GQLGH +  N   P  +E    +
Sbjct: 352 LQLPHGSSHVVDISCGEEHSAFLNDKGEAFIWGYGNDGQLGHKEKTNLNQPKKLEF--TE 409

Query: 624 QVKSVVCGSNFTAAI 638
            ++ VVCG   T  I
Sbjct: 410 PLRRVVCGGGHTGVI 424



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 185/414 (44%), Gaps = 62/414 (14%)

Query: 258 WGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQI 317
           WG G  NG LG   NG E  S       +P  ++     D   +      +  VT QGQI
Sbjct: 102 WGNGQ-NGQLG---NGNETLSLS-----IPSPVQVLSDEDIIQVNASGDISAAVTSQGQI 152

Query: 318 FSWGEGSGGKLGH----GVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           ++WG+  GG L          ++  P LI A     +  VACG+ H   VT  G L TWG
Sbjct: 153 YTWGKTRGGSLSQQKSLSRATNLLLPTLIVAPEVQFVQ-VACGKTHLAGVTKDGKLITWG 211

Query: 374 DGIHNLGLLGQVSEISH------WIPRK---------VSGQMEGLQISSICCGPWHTAAI 418
           +   + G LG  +++        + PR          V G +E  +I    CG  HTA +
Sbjct: 212 N--PDQGKLGHNAQLQQESKNKSYSPRSYADYNAINFVGGALESKKIIQASCGFQHTACL 269

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           T  G+++T+G G  GALGHG+     +P++VE L  +  V   CG+ +T A+ +      
Sbjct: 270 TQDGEVYTWGFGKNGALGHGNWDQVDLPKKVEGLSNI--VKIDCGMDYTFALDK------ 321

Query: 479 GSNGLSSKKLFTWGDGAEGQLG--HGDAEPRVVPLCVKVSDDIS-FCKVACGHSITIALT 535
                    +++WG    GQLG    +     VP+ +++    S    ++CG   +  L 
Sbjct: 322 ------DGNIYSWGSNRYGQLGTTQSNINKHNVPIQLQLPHGSSHVVDISCGEEHSAFLN 375

Query: 536 ATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
             G+ F  G  + GQLG    T    P ++E       +  + CG  H  V+++  +++ 
Sbjct: 376 DKGEAFIWGYGNDGQLGHKEKTNLNQPKKLEFT---EPLRRVVCGGGHTGVITTAGKLFL 432

Query: 595 WGKGANGQLGHGD-NEN--------KQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
           +G+G +GQLG GD NE+        K+   + + L+  +V  +  GSN   AI 
Sbjct: 433 FGRGRDGQLGRGDVNESMAAFRIEPKEVVNISQTLK-AEVLEIALGSNHCLAIA 485


>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
 gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
 gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
 gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
          Length = 1058

 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 173/368 (47%), Gaps = 28/368 (7%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +++ WG    +G LG  + G+E         L P  +  T     Q +ACG +H + +T 
Sbjct: 6   ELYCWGST-SHGQLG--LGGIE-----DEQILTPSQIPWTPDTAVQQVACGHRHTLFLTA 57

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G++++ G     +LGH +      P LI  L    I  + CG  H+ A++  G + +WG
Sbjct: 58  TGKVYACGSNDYSQLGHDLPT--KRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWG 115

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
           D  ++ G LG  ++       KV  Q+    +  I CG  H+ A+TS G+L+++G   +G
Sbjct: 116 D--NDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYG 173

Query: 434 ALG---HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            LG     D +  + P  + TL  +     +CG  H+  I +            S  +F 
Sbjct: 174 QLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK------------SGAVFG 221

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG    GQLG  D   R  P  +K    +    VACG   ++ LT  G VF+ G+  YGQ
Sbjct: 222 WGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG   S+ +   R+   +    I  +ACG+ H +A+V S+  VY +G G++GQLG    +
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 341

Query: 610 NKQTPTLV 617
           +   P +V
Sbjct: 342 SLMLPQVV 349



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 159/338 (47%), Gaps = 31/338 (9%)

Query: 316 QIFSWGEGSGGKLGHGVEAD--VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           +++ WG  S G+LG G   D  +  P  I     + +  VACG  HT  +T +G +Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ---ISSICCGPWHTAAITSAGKLFTFGDG 430
              +        S++ H +P K    +  LQ   I  ICCG  H+ A++  G++ ++GD 
Sbjct: 66  SNDY--------SQLGHDLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117

Query: 431 TFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
             G LGH  D+    +P+ V  L     V  +CG  H+ A+             S  +L+
Sbjct: 118 DCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT------------SCGELY 165

Query: 490 TWGDGAEGQLG---HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           +WG    GQLG     D      PL +     I    +ACG + +  ++ +G VF  G  
Sbjct: 166 SWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225

Query: 547 DYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           + GQLG    T + +PT+++  ++   +  +ACG      ++++  V+T G GA GQLGH
Sbjct: 226 NCGQLGLNDETNRSYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
           G + N+  P +V  L    +  V CG+  T A+   +G
Sbjct: 285 GFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRG 322



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 133/282 (47%), Gaps = 21/282 (7%)

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           +LY WG   H    LG + +     P ++    +   +  + CG  HT  +T+ GK++  
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDT-AVQQVACGHRHTLFLTATGKVYAC 64

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           G   +  LGH     T  P  +  L++   +   CG  H+ A+ +              +
Sbjct: 65  GSNDYSQLGHD--LPTKRPLLIPELQDYVIIQICCGSRHSLALSDWG------------Q 110

Query: 488 LFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           + +WGD   GQLGH  D E   +P  V+     +  ++ACG++ ++ALT+ G+++S GS 
Sbjct: 111 VLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSN 170

Query: 547 DYGQLG--SPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
            YGQLG  SP       +P R+   +    +  IACG  H  ++S    V+ WG+   GQ
Sbjct: 171 IYGQLGVNSPNDLTHCNYPLRLT-TLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           LG  D  N+  PT ++ LR   V+ V CG  F+  +    GV
Sbjct: 230 LGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 271



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 86/158 (54%), Gaps = 5/158 (3%)

Query: 484 SSKKLFTWGDGAEGQLGHG--DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
           S K+L+ WG  + GQLG G  + E  + P  +  + D +  +VACGH  T+ LTATG+V+
Sbjct: 3   SGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVY 62

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           + GS DY QLG    T K P  I   ++   I  I CGS H   +S   +V +WG    G
Sbjct: 63  ACGSNDYSQLGHDLPT-KRPLLIP-ELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCG 120

Query: 602 QLGHG-DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           QLGH  D E  Q P +V  L  K V  + CG+N + A+
Sbjct: 121 QLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLAL 158



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 11/198 (5%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+++ WG  +  G LG  VN    S  D      P  L + + +   +IACG  H+ L++
Sbjct: 162 GELYSWGSNI-YGQLG--VN----SPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS 214

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K G +F WG  + G+LG   E + SYP  +  L    +  VACG+  +  +T  G ++T 
Sbjct: 215 KSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTC 274

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGT 431
           G G +  G LG     +  +PR V  ++ G  I+ + CG  HT A+  S G+++ FG G+
Sbjct: 275 GAGAY--GQLGHGFSSNEMLPRMVM-ELMGSTITQVACGNRHTLALVPSRGRVYAFGLGS 331

Query: 432 FGALGHGDRSSTSVPREV 449
            G LG     S  +P+ V
Sbjct: 332 SGQLGTRSTKSLMLPQVV 349



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 13/147 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG            N  ++   D  +   P  L++   L  + +ACG + +V +T
Sbjct: 217 GAVFGWGRN----------NCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLT 266

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS-GDLYT 371
            +G +F+ G G+ G+LGHG  ++   P+++  L GS I  VACG  HT A+  S G +Y 
Sbjct: 267 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYA 326

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSG 398
           +G G  + G LG  S  S  +P+ V G
Sbjct: 327 FGLG--SSGQLGTRSTKSLMLPQVVIG 351


>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
          Length = 1058

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 173/368 (47%), Gaps = 28/368 (7%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +++ WG    +G LG  + G+E         L P  +  T     Q +ACG +H + +T 
Sbjct: 6   ELYCWGST-SHGQLG--LGGIE-----DEQILTPSQIPWTPDTAVQQVACGHRHTLFLTA 57

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G++++ G     +LGH +      P LI  L    I  + CG  H+ A++  G + +WG
Sbjct: 58  TGKVYACGSNDYSQLGHDLPT--KRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWG 115

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
           D  ++ G LG  ++       KV  Q+    +  I CG  H+ A+TS G+L+++G   +G
Sbjct: 116 D--NDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSNIYG 173

Query: 434 ALG---HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            LG     D +  + P  + TL  +     +CG  H+  I +            S  +F 
Sbjct: 174 QLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK------------SGAVFG 221

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG    GQLG  D   R  P  +K    +    VACG   ++ LT  G VF+ G+  YGQ
Sbjct: 222 WGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG   S+ +   R+   +    I  +ACG+ H +A+V S+  VY +G G++GQLG    +
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTK 341

Query: 610 NKQTPTLV 617
           +   P +V
Sbjct: 342 SLMLPQVV 349



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 159/338 (47%), Gaps = 31/338 (9%)

Query: 316 QIFSWGEGSGGKLGHGVEAD--VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           +++ WG  S G+LG G   D  +  P  I     + +  VACG  HT  +T +G +Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ---ISSICCGPWHTAAITSAGKLFTFGDG 430
              +        S++ H +P K    +  LQ   I  ICCG  H+ A++  G++ ++GD 
Sbjct: 66  SNDY--------SQLGHDLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117

Query: 431 TFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
             G LGH  D+    +P+ V  L     V  +CG  H+ A+             S  +L+
Sbjct: 118 DCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT------------SCGELY 165

Query: 490 TWGDGAEGQLG---HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           +WG    GQLG     D      PL +     I    +ACG + +  ++ +G VF  G  
Sbjct: 166 SWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRN 225

Query: 547 DYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           + GQLG    T + +PT+++  ++   +  +ACG      ++++  V+T G GA GQLGH
Sbjct: 226 NCGQLGLNDETNRSYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
           G + N+  P +V  L    +  V CG+  T A+   +G
Sbjct: 285 GFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRG 322



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 133/282 (47%), Gaps = 21/282 (7%)

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           +LY WG   H    LG + +     P ++    +   +  + CG  HT  +T+ GK++  
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDT-AVQQVACGHRHTLFLTATGKVYAC 64

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           G   +  LGH     T  P  +  L++   +   CG  H+ A+ +              +
Sbjct: 65  GSNDYSQLGHD--LPTKRPLLIPELQDYVIIQICCGSRHSLALSDWG------------Q 110

Query: 488 LFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           + +WGD   GQLGH  D E   +P  V+     +  ++ACG++ ++ALT+ G+++S GS 
Sbjct: 111 VLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSN 170

Query: 547 DYGQLG--SPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
            YGQLG  SP       +P R+   +    +  IACG  H  ++S    V+ WG+   GQ
Sbjct: 171 IYGQLGVNSPNDLTHCNYPLRLT-TLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQ 229

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           LG  D  N+  PT ++ LR   V+ V CG  F+  +    GV
Sbjct: 230 LGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 271



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/158 (39%), Positives = 86/158 (54%), Gaps = 5/158 (3%)

Query: 484 SSKKLFTWGDGAEGQLGHG--DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
           S K+L+ WG  + GQLG G  + E  + P  +  + D +  +VACGH  T+ LTATG+V+
Sbjct: 3   SGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVY 62

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           + GS DY QLG    T K P  I   ++   I  I CGS H   +S   +V +WG    G
Sbjct: 63  ACGSNDYSQLGHDLPT-KRPLLIP-ELQDYVIIQICCGSRHSLALSDWGQVLSWGDNDCG 120

Query: 602 QLGHG-DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           QLGH  D E  Q P +V  L  K V  + CG+N + A+
Sbjct: 121 QLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLAL 158



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 11/198 (5%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+++ WG  +  G LG  VN    S  D      P  L + + +   +IACG  H+ L++
Sbjct: 162 GELYSWGSNI-YGQLG--VN----SPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS 214

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K G +F WG  + G+LG   E + SYP  +  L    +  VACG+  +  +T  G ++T 
Sbjct: 215 KSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTC 274

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGT 431
           G G +  G LG     +  +PR V  ++ G  I+ + CG  HT A+  S G+++ FG G+
Sbjct: 275 GAGAY--GQLGHGFSSNEMLPRMVM-ELMGSTITQVACGNRHTLALVPSRGRVYAFGLGS 331

Query: 432 FGALGHGDRSSTSVPREV 449
            G LG     S  +P+ V
Sbjct: 332 SGQLGTRSTKSLMLPQVV 349



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 13/147 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG            N  ++   D  +   P  L++   L  + +ACG + +V +T
Sbjct: 217 GAVFGWGRN----------NCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLT 266

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS-GDLYT 371
            +G +F+ G G+ G+LGHG  ++   P+++  L GS I  VACG  HT A+  S G +Y 
Sbjct: 267 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYA 326

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSG 398
           +G G  + G LG  S  S  +P+ V G
Sbjct: 327 FGLG--SSGQLGTRSTKSLMLPQVVIG 351


>gi|348676412|gb|EGZ16230.1| hypothetical protein PHYSODRAFT_445559 [Phytophthora sojae]
          Length = 2434

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 154/336 (45%), Gaps = 21/336 (6%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           +++S G+ S G+LGHG  A     + I++L    I  +  G  HT A+T+ G + T G  
Sbjct: 434 EVWSCGQNSYGELGHGDTASRKSFERIESLQQKEIIQIGAGNEHTIALTVDGKVLTCGYN 493

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
            +     G  + +SH       G     Q+ +   G  HT  +T  G+  T G    G L
Sbjct: 494 DNGQCGQGGTARVSHLCEMPKMGDNAISQVHAYN-GCEHTILVTMDGRAATCGYNYRGQL 552

Query: 436 GHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGA 495
           GHG+ +S SVP+ V +L+     + SC  +HT    E        +G   + L+T+G   
Sbjct: 553 GHGNTASESVPKIVRSLENRIVRLVSCSYYHTVMACE-------EDGSGQQYLYTFGRND 605

Query: 496 EGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG 555
            GQLGH D+  R VP  V+   D     VACG   T+ +TATG+ F+ G  DYGQLG   
Sbjct: 606 YGQLGHNDSIDRKVPQHVEAMGDQHVVSVACGQYHTMVVTATGKAFAFGKNDYGQLGIDS 665

Query: 556 STGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
              +  P ++   ++     +I CG YH  V+ S + ++ +G+   GQLG G      T 
Sbjct: 666 MENQLVPVQVRAGLEKHECLEIRCGYYHTIVLCSGAHLFAFGRNDYGQLGLGRANASSTA 725

Query: 615 T------------LVEALRDKQVKSVVCGSNFTAAI 638
                        L+E L  K +    CG   T A+
Sbjct: 726 NLQLQQQRFSYARLIEELEGKDIVRFACGCYHTVAV 761



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 161/361 (44%), Gaps = 41/361 (11%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY----PKLIDALNG-SNIHMVAC 355
           I  G++H + +T  G++ + G    G+ G G  A VS+    PK+ D  N  S +H    
Sbjct: 471 IGAGNEHTIALTVDGKVLTCGYNDNGQCGQGGTARVSHLCEMPKMGD--NAISQVHAYNG 528

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
            E HT  VT+ G   T G      G LG  +  S  +P K+   +E   +  + C  +HT
Sbjct: 529 CE-HTILVTMDGRAATCGYNYR--GQLGHGNTASESVP-KIVRSLENRIVRLVSCSYYHT 584

Query: 416 AAI-----TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
                   +    L+TFG   +G LGH D     VP+ VE + +   V  +CG +HT  +
Sbjct: 585 VMACEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKVPQHVEAMGDQHVVSVACGQYHTMVV 644

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC-KVACGHS 529
                        ++ K F +G    GQLG    E ++VP+ V+   +   C ++ CG+ 
Sbjct: 645 T------------ATGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKHECLEIRCGYY 692

Query: 530 ITIALTATGQVFSMGSADYGQLG----SPGSTGKFPTRIEGNIKHRYIEDI--------A 577
            TI L +   +F+ G  DYGQLG    +  ST     + +     R IE++        A
Sbjct: 693 HTIVLCSGAHLFAFGRNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDIVRFA 752

Query: 578 CGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           CG YH   VS    +Y +G+  +GQLG GD   +  P  ++    K+V  V  G   T  
Sbjct: 753 CGCYHTVAVSDNGVMYVFGRNNHGQLGTGDTNERVYPFPIDDFVGKRVALVAAGFYHTVV 812

Query: 638 I 638
           +
Sbjct: 813 L 813



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 139/306 (45%), Gaps = 33/306 (10%)

Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT--- 360
           G +H +LVT  G+  + G    G+LGHG  A  S PK++ +L    + +V+C  +HT   
Sbjct: 528 GCEHTILVTMDGRAATCGYNYRGQLGHGNTASESVPKIVRSLENRIVRLVSCSYYHTVMA 587

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           C    SG  Y +  G ++ G LG    I   +P+ V   M    + S+ CG +HT  +T+
Sbjct: 588 CEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKVPQHVEA-MGDQHVVSVACGQYHTMVVTA 646

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAAIVEVAGKTSG 479
            GK F FG   +G LG     +  VP +V   L++ + +   CG +HT  +         
Sbjct: 647 TGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKHECLEIRCGYYHTIVLC-------- 698

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV------------ACG 527
               S   LF +G    GQLG G A               S+ ++            ACG
Sbjct: 699 ----SGAHLFAFGRNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDIVRFACG 754

Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAV 585
              T+A++  G ++  G  ++GQLG+ G T +  +P  I+  +  R +  +A G YH  V
Sbjct: 755 CYHTVAVSDNGVMYVFGRNNHGQLGT-GDTNERVYPFPIDDFVGKR-VALVAAGFYHTVV 812

Query: 586 VSSKSE 591
           ++   E
Sbjct: 813 LTGGKE 818



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 22/248 (8%)

Query: 244 SCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIAC 303
           +C ED  G   ++ +G     G LG         S DR+   +P+ +E+       S+AC
Sbjct: 587 ACEEDGSGQQYLYTFGRN-DYGQLGHN------DSIDRK---VPQHVEAMGDQHVVSVAC 636

Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA-LNGSNIHMVACGEFHTCA 362
           G  H ++VT  G+ F++G+   G+LG     +   P  + A L       + CG +HT  
Sbjct: 637 GQYHTMVVTATGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKHECLEIRCGYYHTIV 696

Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEIS---------HWIPRKVSGQMEGLQISSICCGPW 413
           +     L+ +G   +    LG+ +  S          +   ++  ++EG  I    CG +
Sbjct: 697 LCSGAHLFAFGRNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDIVRFACGCY 756

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           HT A++  G ++ FG    G LG GD +    P  ++     +  + + G +HT  +V  
Sbjct: 757 HTVAVSDNGVMYVFGRNNHGQLGTGDTNERVYPFPIDDFVGKRVALVAAGFYHT--VVLT 814

Query: 474 AGKTSGSN 481
            GK    N
Sbjct: 815 GGKEDEKN 822



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 8/163 (4%)

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
           +++++ G  + G+LGHGD   R     ++        ++  G+  TIALT  G+V + G 
Sbjct: 433 REVWSCGQNSYGELGHGDTASRKSFERIESLQQKEIIQIGAGNEHTIALTVDGKVLTCGY 492

Query: 546 ADYGQLGSPGSTG-----KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
            D GQ G  G+       + P   +  I   +  +   G  H  +V+      T G    
Sbjct: 493 NDNGQCGQGGTARVSHLCEMPKMGDNAISQVHAYN---GCEHTILVTMDGRAATCGYNYR 549

Query: 601 GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
           GQLGHG+  ++  P +V +L ++ V+ V C    T   C   G
Sbjct: 550 GQLGHGNTASESVPKIVRSLENRIVRLVSCSYYHTVMACEEDG 592


>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1391

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 170/366 (46%), Gaps = 27/366 (7%)

Query: 256 FIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQG 315
           F WG  +  G LG  + G + +        + K + +      QSI+CG  H  +V   G
Sbjct: 4   FCWGSSM-EGQLGIGITGGQTTQE------VAKEVTTLSGQRVQSISCGKHHTGIVLDDG 56

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
            ++  G  S G+LG   + +   P  + AL    I  VACG+ HT AV+  G +  WG  
Sbjct: 57  TLYMCGANSKGQLGQ--DRNQYKPVQVSALETVVIKHVACGDDHTLAVSDRGQVLGWGR- 113

Query: 376 IHNLGLLGQVSEISHWIPR-KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++ G  G  +      PR ++   +   Q   +CCG  H+ A+T  G+LF++GD T+G 
Sbjct: 114 -NDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQ 172

Query: 435 LGHGDRSS--TSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           LG G   +  T  P E+ +L+ +  V  +CG +H+ A+       SGS       +F WG
Sbjct: 173 LGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALT-----ISGS-------VFGWG 220

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
               GQLG G+ E +  P  ++         +ACG   T  LTA G VF  G    GQLG
Sbjct: 221 KNDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLG 280

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS-SKSEVYTWGKGANGQLGHGDNENK 611
              +  +   R   ++    I  + CG +H  V+  SK  +Y +G+G +GQLG  +  + 
Sbjct: 281 HGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSC 340

Query: 612 QTPTLV 617
             P  V
Sbjct: 341 SNPQRV 346



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 157/329 (47%), Gaps = 26/329 (7%)

Query: 318 FSWGEGSGGKLGHGV---EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           F WG    G+LG G+   +      K +  L+G  +  ++CG+ HT  V   G LY  G 
Sbjct: 4   FCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCG- 62

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG- 433
             ++ G LGQ  + + + P +VS  +E + I  + CG  HT A++  G++  +G    G 
Sbjct: 63  -ANSKGQLGQ--DRNQYKPVQVSA-LETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQ 118

Query: 434 -ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
             L  GD  +   PR ++ L   + V   CG  H+ A+                +LF+WG
Sbjct: 119 CGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTR------------DGRLFSWG 166

Query: 493 DGAEGQLGHGDAEPRVV--PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           D   GQLG G         P  +     +   +VACG   + ALT +G VF  G  D GQ
Sbjct: 167 DNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQ 226

Query: 551 LGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG      K +PT +  N++ + ++ IACG  H A++++   V+ +G+G+ GQLGHG N 
Sbjct: 227 LGLGNKENKAYPTLLR-NMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNY 285

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           N+  P  V  L    +  V CG + T  +
Sbjct: 286 NEVNPRKVIDLMGSDITQVTCGKHHTLVL 314



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 128/427 (29%), Positives = 189/427 (44%), Gaps = 63/427 (14%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGV-EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           G VF WG+           N V ++   ++ +   P +L +      + IACG  H  ++
Sbjct: 214 GSVFGWGK-----------NDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAML 262

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS-GDLY 370
           T  G +F +G+GS G+LGHG   +   P+ +  L GS+I  V CG+ HT  +  S G LY
Sbjct: 263 TADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLY 322

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQM------------EGLQISSICCGPWH--TA 416
            +G GIH  G LGQ    S   P++V G              +G  +  I  G  H  + 
Sbjct: 323 AFGQGIH--GQLGQDEARSCSNPQRVPGPWVPHSSTEKNSSSKGRVVRCIYAGGHHCFST 380

Query: 417 AITSAGKL---FTFGDGT---FGALGHGDRSSTSVPREVETLKELKTVM---ASCGVWHT 467
           A  +A  +     F D +   F  L                   L+TV+    +CG  HT
Sbjct: 381 ATNAADDIQIKLLFRDISTRIFFQLTXXXXXXXXX-XXXXXXXXLETVVIKHVACGDDHT 439

Query: 468 AAI---VEVAGKTSGSNGLSSKKLFTWGDGAEGQ--LGHGDAEPRVVPLCVKVSDDISFC 522
            A+   V+V G               WG    GQ  L  GD E +  P  ++      F 
Sbjct: 440 LAVSDRVQVLG---------------WGRNDRGQCGLATGDIENKPRPRILRHLASYQFV 484

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF---PTRIEGNIKHRYIEDIACG 579
           KV CG   ++ALT  G++FS G   YGQLG       +   PT +  +++   +  +ACG
Sbjct: 485 KVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELT-SLRGVPLVRVACG 543

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            +H   ++    V+ WGK   GQLG G+ ENK  PTL+  +R + VK + CG + TA + 
Sbjct: 544 GFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDHTAMLT 603

Query: 640 LHKGVSI 646
              GV +
Sbjct: 604 ADGGVFL 610



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 124/242 (51%), Gaps = 22/242 (9%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG--VE 333
           +++ D  +   P++L+         + CGS H++ +T+ G++FSWG+ + G+LG G  V 
Sbjct: 121 LATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVT 180

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWI 392
                P  + +L G  +  VACG FH+ A+T+SG ++ WG + +  LGL  + ++    +
Sbjct: 181 NYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKAYPTL 240

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
            R +  QM    +  I CG  HTA +T+ G +F FG G+ G LGHG   +   PR+V  L
Sbjct: 241 LRNMRSQM----VKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDL 296

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE----PRV 508
                   +CG  HT  +        GS G    +L+ +G G  GQLG  +A     P+ 
Sbjct: 297 MGSDITQVTCGKHHTLVL-------EGSKG----RLYAFGQGIHGQLGQDEARSCSNPQR 345

Query: 509 VP 510
           VP
Sbjct: 346 VP 347



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 123/242 (50%), Gaps = 22/242 (9%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG--VE 333
           +++ D  +   P++L          + CGS H++ +T+ G++FSWG+ + G+LG G  V 
Sbjct: 461 LATGDIENKPRPRILRHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVT 520

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWI 392
                P  + +L G  +  VACG FH+ A+T+SG ++ WG + +  LGL  + ++    +
Sbjct: 521 NYTDRPTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTL 580

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
            R +  QM    +  I CG  HTA +T+ G +F FG G+ G LGHG   +   PR+V  L
Sbjct: 581 LRNMRSQM----VKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDL 636

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE----PRV 508
                   +CG  HT  +        GS G    +L+ +G G  GQLG  +A     P+ 
Sbjct: 637 MGSDITQVTCGKHHTLVL-------EGSKG----RLYAFGQGIHGQLGQDEARSCSNPQR 685

Query: 509 VP 510
           VP
Sbjct: 686 VP 687



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 130/272 (47%), Gaps = 18/272 (6%)

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR-KVSGQMEGLQISSI 408
           I  VACG+ HT AV+    +  WG   ++ G  G  +      PR ++   +   Q   +
Sbjct: 429 IKHVACGDDHTLAVSDRVQVLGWGR--NDRGQCGLATGDIENKPRPRILRHLASYQFVKV 486

Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSS--TSVPREVETLKELKTVMASCGVWH 466
           CCG  H+ A+T  G+LF++GD T+G LG G   +  T  P E+ +L+ +  V  +CG +H
Sbjct: 487 CCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFH 546

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           + A+       SGS       +F WG    GQLG G+ E +  P  ++         +AC
Sbjct: 547 SFALT-----ISGS-------VFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIAC 594

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
           G   T  LTA G VF  G    GQLG   +  +   R   ++    I  + CG +H  V+
Sbjct: 595 GQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVL 654

Query: 587 S-SKSEVYTWGKGANGQLGHGDNENKQTPTLV 617
             SK  +Y +G+G +GQLG  +  +   P  V
Sbjct: 655 EGSKGRLYAFGQGIHGQLGQDEARSCSNPQRV 686



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 107/417 (25%), Positives = 172/417 (41%), Gaps = 59/417 (14%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA-VLV 311
           G VF++G+G   G LG   N  E++         P+ +   +  D   + CG  H  VL 
Sbjct: 266 GGVFLFGQG-SEGQLGHGSNYNEVN---------PRKVIDLMGSDITQVTCGKHHTLVLE 315

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLI-------------DALNGSNIHMVACGEF 358
             +G+++++G+G  G+LG       S P+ +              +  G  +  +  G  
Sbjct: 316 GSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPGPWVPHSSTEKNSSSKGRVVRCIYAGGH 375

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHW------------IPRKVSGQMEGLQIS 406
           H  +   +       D I    L   +S    +                    +E + I 
Sbjct: 376 HCFSTATNA-----ADDIQIKLLFRDISTRIFFQLTXXXXXXXXXXXXXXXXXLETVVIK 430

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFG--ALGHGDRSSTSVPREVETLKELKTVMASCGV 464
            + CG  HT A++   ++  +G    G   L  GD  +   PR +  L   + V   CG 
Sbjct: 431 HVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGS 490

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV--PLCVKVSDDISFC 522
            H+ A+                +LF+WGD   GQLG G         P  +     +   
Sbjct: 491 LHSMALTR------------DGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLV 538

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSY 581
           +VACG   + ALT +G VF  G  D GQLG      K +PT +  N++ + ++ IACG  
Sbjct: 539 RVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLR-NMRSQMVKHIACGQD 597

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           H A++++   V+ +G+G+ GQLGHG N N+  P  V  L    +  V CG + T  +
Sbjct: 598 HTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVL 654



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 174/419 (41%), Gaps = 57/419 (13%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG+    G LG  +  +  +  DR     P  L S   +    +ACG  H+  +T
Sbjct: 160 GRLFSWGDNT-YGQLG--IGTLVTNYTDR-----PTELTSLRGVPLVRVACGGFHSFALT 211

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG+   G+LG G + + +YP L+  +    +  +ACG+ HT  +T  G ++ +
Sbjct: 212 ISGSVFGWGKNDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLF 271

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGT 431
           G G  + G LG  S  +   PRKV   M G  I+ + CG  HT  +  S G+L+ FG G 
Sbjct: 272 GQG--SEGQLGHGSNYNEVNPRKVIDLM-GSDITQVTCGKHHTLVLEGSKGRLYAFGQGI 328

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LG  +  S S P+ V             G W   +  E   K S S G   + ++  
Sbjct: 329 HGQLGQDEARSCSNPQRVP------------GPWVPHSSTE---KNSSSKGRVVRCIYAG 373

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFC--------------------------KVA 525
           G        +   + ++  L   +S  I F                            VA
Sbjct: 374 GHHCFSTATNAADDIQIKLLFRDISTRIFFQLTXXXXXXXXXXXXXXXXXLETVVIKHVA 433

Query: 526 CGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFP-TRIEGNIKHRYIEDIACGSYHI 583
           CG   T+A++   QV   G  D GQ G + G     P  RI  ++       + CGS H 
Sbjct: 434 CGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASYQFVKVCCGSLHS 493

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQT--PTLVEALRDKQVKSVVCGSNFTAAICL 640
             ++    +++WG    GQLG G      T  PT + +LR   +  V CG   + A+ +
Sbjct: 494 MALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVACGGFHSFALTI 552



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 136/285 (47%), Gaps = 26/285 (9%)

Query: 370 YTWG---DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
           + WG   +G   +G+ G   + +  + ++V+  + G ++ SI CG  HT  +   G L+ 
Sbjct: 4   FCWGSSMEGQLGIGITG--GQTTQEVAKEVT-TLSGQRVQSISCGKHHTGIVLDDGTLYM 60

Query: 427 FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            G  + G LG  DR+    P +V  L+ +     +CG  HT A+ +              
Sbjct: 61  CGANSKGQLGQ-DRNQYK-PVQVSALETVVIKHVACGDDHTLAVSD------------RG 106

Query: 487 KLFTWGDGAEGQ--LGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
           ++  WG    GQ  L  GD E +  P  +K      F KV CG   ++ALT  G++FS G
Sbjct: 107 QVLGWGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWG 166

Query: 545 SADYGQLGSPGSTGKF---PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
              YGQLG       +   PT +  +++   +  +ACG +H   ++    V+ WGK   G
Sbjct: 167 DNTYGQLGIGTLVTNYTDRPTELT-SLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVG 225

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSI 646
           QLG G+ ENK  PTL+  +R + VK + CG + TA +    GV +
Sbjct: 226 QLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFL 270



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 132/269 (49%), Gaps = 25/269 (9%)

Query: 290 LESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK--LGHGVEADVSYPKLIDALNG 347
           LE+ V+   + +ACG  H + V+ + Q+  WG    G+  L  G   +   P+++  L  
Sbjct: 424 LETVVI---KHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLAS 480

Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS-GQMEGLQIS 406
                V CG  H+ A+T  G L++WGD  +  G LG  + ++++  R      + G+ + 
Sbjct: 481 YQFVKVCCGSLHSMALTRDGRLFSWGDNTY--GQLGIGTLVTNYTDRPTELTSLRGVPLV 538

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            + CG +H+ A+T +G +F +G    G LG G++ + S P  +  ++       +CG  H
Sbjct: 539 RVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDH 598

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV--KVSDDISFCKV 524
           TA +    G            +F +G G+EGQLGHG     V P  V   +  DI+  +V
Sbjct: 599 TAMLTADGG------------VFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDIT--QV 644

Query: 525 ACGHSITIALTAT-GQVFSMGSADYGQLG 552
            CG   T+ L  + G++++ G   +GQLG
Sbjct: 645 TCGKHHTLVLEGSKGRLYAFGQGIHGQLG 673



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 98/198 (49%), Gaps = 12/198 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG+    G LG  +  +  +  DR     P  L S   +    +ACG  H+  +T
Sbjct: 500 GRLFSWGDNT-YGQLG--IGTLVTNYTDR-----PTELTSLRGVPLVRVACGGFHSFALT 551

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG+   G+LG G + + SYP L+  +    +  +ACG+ HT  +T  G ++ +
Sbjct: 552 ISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLF 611

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGT 431
           G G  + G LG  S  +   PRKV   M G  I+ + CG  HT  +  S G+L+ FG G 
Sbjct: 612 GQG--SEGQLGHGSNYNEVNPRKVIDLM-GSDITQVTCGKHHTLVLEGSKGRLYAFGQGI 668

Query: 432 FGALGHGDRSSTSVPREV 449
            G LG  +  S S P+ V
Sbjct: 669 HGQLGQDEARSCSNPQRV 686


>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
          Length = 423

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 171/370 (46%), Gaps = 32/370 (8%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
            PK L   +  +  +++CGS+H + +T  G ++SWG GS G+LGHG    ++ P+ I   
Sbjct: 43  FPKQLGGLLGEEIVAVSCGSRHTMALTASGAVYSWGWGSMGQLGHGDLKSINVPQKIAFF 102

Query: 346 N--GSNIHMVACGEFHTCAVTLSGDLYTWGDGIH--NLGLLGQVSEISHWIPRKVSGQME 401
              G  +  V+CG  H+ AVT  G LY WG+  H   LGL  +        P K    +E
Sbjct: 103 EQEGLKVDYVSCGGCHSAAVTNDGTLYMWGE-THWGQLGLPKEFEAAHESFPVKCP-LLE 160

Query: 402 GL---QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR----------SSTSVPRE 448
           G+    +  + CG  HTAA+T+ G+++ +G G  G LG G               S P  
Sbjct: 161 GVADESVVKVSCGGTHTAALTNLGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHL 220

Query: 449 VETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV 508
           VE     K V  +CG +H+AA+ E               ++ WG    G LG G    + 
Sbjct: 221 VEGFNGEKVVQVACGAFHSAAVTE------------QGHVYIWGKEDYGMLGVGQTSDQQ 268

Query: 509 VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNI 568
            P  V+  DDI   +V+CG   T+ +  +G  ++ G  +YG+LG   +  +    +   +
Sbjct: 269 TPKRVEFFDDIPALRVSCGGWHTMVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKAL 328

Query: 569 KHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSV 628
           K + +   ACG  H   V+S    Y  G+  +G+LG  D +    PT ++ L    V+ V
Sbjct: 329 KGQTVIQAACGGSHTLFVTSDGIAYVAGRPDHGRLGMTDMKPLSVPTRLD-LGPIPVRQV 387

Query: 629 VCGSNFTAAI 638
             G   + A+
Sbjct: 388 SAGGAHSMAL 397



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 108/244 (44%), Gaps = 20/244 (8%)

Query: 235 SAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRD----ALL---- 286
           S V  S  G+       LG V++WG G  +G LG       I SA  +D     LL    
Sbjct: 166 SVVKVSCGGTHTAALTNLGRVYVWGRG-DSGQLG-------IGSAWLKDTDDNGLLGVSR 217

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P ++E         +ACG+ H+  VT+QG ++ WG+   G LG G  +D   PK ++  +
Sbjct: 218 PHLVEGFNGEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFD 277

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
                 V+CG +HT  V  SGD Y +G G    G LG     S   P  V   ++G  + 
Sbjct: 278 DIPALRVSCGGWHTMVVAKSGDCYAFGRG--EYGRLGLGDTKSRTRPHLVK-ALKGQTVI 334

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
              CG  HT  +TS G  +  G    G LG  D    SVP  ++ L  +     S G  H
Sbjct: 335 QAACGGSHTLFVTSDGIAYVAGRPDHGRLGMTDMKPLSVPTRLD-LGPIPVRQVSAGGAH 393

Query: 467 TAAI 470
           + A+
Sbjct: 394 SMAL 397


>gi|282722850|gb|ADA84471.1| retinitis pigmentosa GTPase regulator protein 1 [Danio rerio]
          Length = 1697

 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 165/346 (47%), Gaps = 42/346 (12%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+CG  H+  VT+QG++F +G+ + G+LG  ++  V+ P  +  L G     VACG  HT
Sbjct: 39  ISCGQSHSAFVTEQGRLFVFGDNNRGQLGLQIKGPVTKPVCVKVLKGERAQSVACGTDHT 98

Query: 361 CAVTLSGDLYTWG---DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
              T  G++   G   DG   LG            P       +   I  +  G   +AA
Sbjct: 99  LVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPF-----CDYAPIKLLSAGDHTSAA 153

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +T  G+LF +GD + G LG G+ S   +P+E+   + +  V  SCG  H+A + +     
Sbjct: 154 LTEDGRLFLWGDNSAGQLGFGNDSHALLPQELNMGQSIHWV--SCGYRHSALVTD----- 206

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
                  S  ++T+G+ A+G+LG    +        +V    S  +VACG   T+ALT  
Sbjct: 207 -------SGDVYTFGESADGRLGLSAHQLANHSYPQRVESLRSVLQVACGGKHTLALTE- 258

Query: 538 GQVFSMGSADYGQLG---------SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
            +++  G  ++GQLG         SP + G F        +   +  + CG  H A+++ 
Sbjct: 259 DELYCFGGGEFGQLGLGMLVFVADSPVAVGHF--------RKDRVTHVTCGEQHSALITD 310

Query: 589 KSEVYTWGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCGS 632
              +YT+G G +G+LGHGD    N+ TPT+ +   +  V +V CGS
Sbjct: 311 SGLLYTFGDGRHGKLGHGDENFTNQFTPTVCQRFFEYSVMTVACGS 356



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 169/358 (47%), Gaps = 53/358 (14%)

Query: 243 GSCHEDF-DGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI 301
           G  H  F    G +F++G+    G LG  + G           +  KVL+      AQS+
Sbjct: 42  GQSHSAFVTEQGRLFVFGDN-NRGQLGLQIKGPVTK------PVCVKVLKGE---RAQSV 91

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACGEFHT 360
           ACG+ H ++ T QG+I + G  S G+LG G   D +S+ +L    + + I +++ G+  +
Sbjct: 92  ACGTDHTLVSTSQGEILAAGGNSDGQLGLGHCNDSISFQRLRPFCDYAPIKLLSAGDHTS 151

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T  G L+ WGD  ++ G LG  ++    +P++++    G  I  + CG  H+A +T 
Sbjct: 152 AALTEDGRLFLWGD--NSAGQLGFGNDSHALLPQELNM---GQSIHWVSCGYRHSALVTD 206

Query: 421 AGKLFTFG---DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +G ++TFG   DG  G   H   ++ S P+ VE+L+ +  +  +CG  HT A+ E     
Sbjct: 207 SGDVYTFGESADGRLGLSAH-QLANHSYPQRVESLRSV--LQVACGGKHTLALTE----- 258

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHG------DAEPRVVPLCVKVSDDISFCKVACGHSIT 531
                    +L+ +G G  GQLG G      D+     P+ V          V CG   +
Sbjct: 259 --------DELYCFGGGEFGQLGLGMLVFVADS-----PVAVGHFRKDRVTHVTCGEQHS 305

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIE----DIACGSYHIAV 585
             +T +G +++ G   +G+LG       F  +    +  R+ E     +ACGS H+ V
Sbjct: 306 ALITDSGLLYTFGDGRHGKLGH--GDENFTNQFTPTVCQRFFEYSVMTVACGSSHMLV 361


>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 778

 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 116/354 (32%), Positives = 168/354 (47%), Gaps = 39/354 (11%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           +IA G  H   +   G ++ WG  + G+LG G + D S P  +  L  S +  +A G +H
Sbjct: 415 AIAAGGLHTCALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLA-SGVETIAAGGWH 473

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           TCA+T SG ++ WG   +N G LG  S I H  P  VSG   G  +++I  G +HT A+T
Sbjct: 474 TCALTSSGGVWCWGR--NNSGQLGDGSTIYHITPVAVSGLPSG--VTAIAAGDYHTCALT 529

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
            +G ++ +G    G LG G  +  S P  V  L    TV+A+ G +HT A+         
Sbjct: 530 GSGGVWCWGYNLSGQLGDGTTTDRSTPVAVSGLTSGVTVIAA-GRFHTCALT-------- 580

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK-VSDDISFCKVACGHSITIALTATG 538
               SS  ++ WG   +GQLG G    R  P+ V  +   ++   +A G   T ALT++G
Sbjct: 581 ----SSGGVWCWGANFDGQLGDGTTTNRTTPVAVSGLPSGVT--AIAAGGWHTCALTSSG 634

Query: 539 QVFSMGSADYGQLG--------SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           +V+  G   YGQLG        +PG+    P+ +           IA G  H   ++S  
Sbjct: 635 EVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSGVT---------AIAAGWEHTCALTSSG 685

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           EV+ WG    GQLG G   N+ TP  V  L    V ++  G   T A+    GV
Sbjct: 686 EVWCWGDNYYGQLGDGTTTNRSTPGAVSGL-PSGVTAIAAGVYHTCALTGSGGV 738



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 132/428 (30%), Positives = 194/428 (45%), Gaps = 35/428 (8%)

Query: 213 SGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE-DFDGLGDVFIWGEGLGNGLLGGAV 271
           SG L D +   S+       L S V++ + G  H     G G+V+ WG G G G LG   
Sbjct: 287 SGQLGDGSDTDSSTPVAVSGLPSGVTAIAAGDYHTCALTGSGEVWCWG-GNGFGQLG--- 342

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG 331
              + ++  R        L S V    ++IA G  H   +   G ++ WG  + G+LG G
Sbjct: 343 ---DGTTTARSTPAAVSGLPSGV----ETIAAGDYHTCALMSSGGVWCWGRNNSGQLGDG 395

Query: 332 VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHW 391
                S P  +  L  S +  +A G  HTCA+  SG ++ WG  ++N G LG  S+    
Sbjct: 396 TTTARSTPAAVSGLP-SGVTAIAAGGLHTCALMSSGGVWCWG--LNNSGQLGDGSDTDSS 452

Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
            P  VSG   G++  +I  G WHT A+TS+G ++ +G    G LG G       P  V  
Sbjct: 453 TPVAVSGLASGVE--TIAAGGWHTCALTSSGGVWCWGRNNSGQLGDGSTIYHITPVAVSG 510

Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPL 511
           L    T +A+ G +HT A+              S  ++ WG    GQLG G    R  P+
Sbjct: 511 LPSGVTAIAA-GDYHTCALT------------GSGGVWCWGYNLSGQLGDGTTTDRSTPV 557

Query: 512 CVK-VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH 570
            V  ++  ++   +A G   T ALT++G V+  G+   GQLG  G+T    T +  +   
Sbjct: 558 AVSGLTSGVTV--IAAGRFHTCALTSSGGVWCWGANFDGQLGD-GTTTNRTTPVAVSGLP 614

Query: 571 RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
             +  IA G +H   ++S  EV+ WG    GQLG G   N+ TP  V  L    V ++  
Sbjct: 615 SGVTAIAAGGWHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGL-PSGVTAIAA 673

Query: 631 GSNFTAAI 638
           G   T A+
Sbjct: 674 GWEHTCAL 681



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 145/531 (27%), Positives = 225/531 (42%), Gaps = 77/531 (14%)

Query: 119 ALISEDN-RCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSP 177
           AL+S     C  R+DS       S T  ++P  VS + S +T   +GD     +      
Sbjct: 272 ALMSSGGVWCWGRNDS-GQLGDGSDTDSSTPVAVSGLPSGVTAIAAGDYHTCALTGSGEV 330

Query: 178 QNRLGKAFSEVLSFTAAAKAYTRA--------ESVSK----SLNFVASGG---------- 215
               G  F ++   T  A++   A        E+++     +   ++SGG          
Sbjct: 331 WCWGGNGFGQLGDGTTTARSTPAAVSGLPSGVETIAAGDYHTCALMSSGGVWCWGRNNSG 390

Query: 216 -LDDANSRSSTADSFRISLSSAVSSSSQGSCHE-DFDGLGDVFIWGEGLGNGLLGGAVNG 273
            L D  + + +  +    L S V++ + G  H       G V+ WG            N 
Sbjct: 391 QLGDGTTTARSTPAAVSGLPSGVTAIAAGGLHTCALMSSGGVWCWGLN----------NS 440

Query: 274 VEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
            ++      D+  P V  S +    ++IA G  H   +T  G ++ WG  + G+LG G  
Sbjct: 441 GQLGDGSDTDSSTP-VAVSGLASGVETIAAGGWHTCALTSSGGVWCWGRNNSGQLGDGST 499

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNL-GLLGQVSEISHWI 392
                P  +  L  S +  +A G++HTCA+T SG ++ WG   +NL G LG  +      
Sbjct: 500 IYHITPVAVSGLP-SGVTAIAAGDYHTCALTGSGGVWCWG---YNLSGQLGDGTTTDRST 555

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
           P  VSG   G+ +  I  G +HT A+TS+G ++ +G    G LG G  ++ + P  V  L
Sbjct: 556 PVAVSGLTSGVTV--IAAGRFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTTPVAVSGL 613

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC 512
               T +A+ G WHT A+             SS +++ WGD   GQLG G    R  P  
Sbjct: 614 PSGVTAIAA-GGWHTCALT------------SSGEVWCWGDNYYGQLGDGTTTNRSTPGA 660

Query: 513 VK-VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG--------SPGSTGKFPTR 563
           V  +   ++   +A G   T ALT++G+V+  G   YGQLG        +PG+    P+ 
Sbjct: 661 VSGLPSGVT--AIAAGWEHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSG 718

Query: 564 IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
           +           IA G YH   ++    V  WG   +GQLG G    + TP
Sbjct: 719 VT---------AIAAGVYHTCALTGSGGVMCWGNNGDGQLGDGRPLYRTTP 760



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 164/348 (47%), Gaps = 26/348 (7%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           +IA G+ H   +T  G +  WG    G+LG+G+    S P  +  L  S +  +A G  H
Sbjct: 108 AIAAGNYHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLP-SGVTAIAAGGDH 166

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           TCA+  SG +  WGD  +  G LG  +  +   P  VSG   G  +++I  G  HT A+T
Sbjct: 167 TCALMSSGGVMCWGDNYY--GQLGDGTTTNRRTPVAVSGLPSG--VTAIAAGGLHTCALT 222

Query: 420 SAGKLFTFGDGTFGALGHGDRS-STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
            +G+++ +G   +G LG G  + S S P  V  L    T +A+ G+ HT A+        
Sbjct: 223 GSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPSGMTAIAAGGL-HTCAL-------- 273

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK-VSDDISFCKVACGHSITIALTAT 537
               +SS  ++ WG    GQLG G       P+ V  +   ++   +A G   T ALT +
Sbjct: 274 ----MSSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGLPSGVT--AIAAGDYHTCALTGS 327

Query: 538 GQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           G+V+  G   +GQLG   +T +  P  + G      +E IA G YH   + S   V+ WG
Sbjct: 328 GEVWCWGGNGFGQLGDGTTTARSTPAAVSG--LPSGVETIAAGDYHTCALMSSGGVWCWG 385

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           +  +GQLG G    + TP  V  L    V ++  G   T A+    GV
Sbjct: 386 RNNSGQLGDGTTTARSTPAAVSGL-PSGVTAIAAGGLHTCALMSSGGV 432



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 150/347 (43%), Gaps = 24/347 (6%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           +IA G  H   +T  G +  WG    G+LG G     S P  +  L  S +  +A G +H
Sbjct: 57  AIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSGLP-SGVTAIAAGNYH 115

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           TCA+T SG +  W  G +  G LG         P  VSG   G  +++I  G  HT A+ 
Sbjct: 116 TCALTGSGGVRCW--GANYSGQLGNGLTFGRSTPGAVSGLPSG--VTAIAAGGDHTCALM 171

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
           S+G +  +GD  +G LG G  ++   P  V  L    T +A+ G+ HT A+         
Sbjct: 172 SSGGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLPSGVTAIAAGGL-HTCALT-------- 222

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAE-PRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
                S +++ WG    GQLG G     R  P  V          +A G   T AL ++G
Sbjct: 223 ----GSGEVWCWGYNYYGQLGDGTTTYSRSTPAAVGGLPS-GMTAIAAGGLHTCALMSSG 277

Query: 539 QVFSMGSADYGQLGSPGST-GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
            V+  G  D GQLG    T    P  + G      +  IA G YH   ++   EV+ WG 
Sbjct: 278 GVWCWGRNDSGQLGDGSDTDSSTPVAVSG--LPSGVTAIAAGDYHTCALTGSGEVWCWGG 335

Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
              GQLG G    + TP  V  L    V+++  G   T A+    GV
Sbjct: 336 NGFGQLGDGTTTARSTPAAVSGL-PSGVETIAAGDYHTCALMSSGGV 381



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 138/285 (48%), Gaps = 30/285 (10%)

Query: 233 LSSAVSSSSQGSCHE-DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE 291
           L S V++ + G  H     G G V+ WG  L +G LG      + ++ DR   +    L 
Sbjct: 511 LPSGVTAIAAGDYHTCALTGSGGVWCWGYNL-SGQLG------DGTTTDRSTPVAVSGLT 563

Query: 292 STVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH 351
           S V +    IA G  H   +T  G ++ WG    G+LG G   + + P  +  L  S + 
Sbjct: 564 SGVTV----IAAGRFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTTPVAVSGLP-SGVT 618

Query: 352 MVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCG 411
            +A G +HTCA+T SG+++ WGD  +  G LG  +  +   P  VSG   G  +++I  G
Sbjct: 619 AIAAGGWHTCALTSSGEVWCWGDNYY--GQLGDGTTTNRSTPGAVSGLPSG--VTAIAAG 674

Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIV 471
             HT A+TS+G+++ +GD  +G LG G  ++ S P  V  L    T +A+ GV+HT A+ 
Sbjct: 675 WEHTCALTSSGEVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSGVTAIAA-GVYHTCALT 733

Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
                        S  +  WG+  +GQLG G    R  P+ V  S
Sbjct: 734 ------------GSGGVMCWGNNGDGQLGDGRPLYRTTPVDVVTS 766



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 115/283 (40%), Gaps = 62/283 (21%)

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +++I  G  HT A+T +G +  +G   FG LG G  ++ S P  V  L    T +A+ G 
Sbjct: 55  VTAIAAGGAHTCALTGSGGVMCWGGNDFGQLGDGTPTTRSTPGAVSGLPSGVTAIAA-GN 113

Query: 465 WHTAAIV----------------------------EVAGKTSGSNG-----------LSS 485
           +HT A+                              V+G  SG              +SS
Sbjct: 114 YHTCALTGSGGVRCWGANYSGQLGNGLTFGRSTPGAVSGLPSGVTAIAAGGDHTCALMSS 173

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVK-VSDDISFCKVACGHSITIALTATGQVFSMG 544
             +  WGD   GQLG G    R  P+ V  +   ++   +A G   T ALT +G+V+  G
Sbjct: 174 GGVMCWGDNYYGQLGDGTTTNRRTPVAVSGLPSGVT--AIAAGGLHTCALTGSGEVWCWG 231

Query: 545 SADYGQLG---------SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
              YGQLG         +P + G  P+          +  IA G  H   + S   V+ W
Sbjct: 232 YNYYGQLGDGTTTYSRSTPAAVGGLPSG---------MTAIAAGGLHTCALMSSGGVWCW 282

Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G+  +GQLG G + +  TP  V  L    V ++  G   T A+
Sbjct: 283 GRNDSGQLGDGSDTDSSTPVAVSGL-PSGVTAIAAGDYHTCAL 324


>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
           latipes]
          Length = 1059

 Score =  146 bits (369), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 154/323 (47%), Gaps = 18/323 (5%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            + + CG +H   + + G +++ G    G+LGH  E     P+ + AL+   I  ++CGE
Sbjct: 36  VRDVGCGRRHTAFLLEDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQIIVALSCGE 93

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
            HT A+   G +++WG G      L    E    +PR +   +  +Q++ + CG WH+ A
Sbjct: 94  SHTLALNDKGQVFSWGLGSDGQLGLNNFEECIR-VPRNIKS-LSDVQVAQVACGYWHSLA 151

Query: 418 ITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           ++  G +F++G   +G LG G    S SVP+ +++L+ +     + G  H+ A+      
Sbjct: 152 LSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALT----- 206

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
                   S  +F WG    GQLG  D   R  P  +K         ++CG   T ALT 
Sbjct: 207 -------LSGAVFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTK 259

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTW 595
            G VF+ G+  YGQLG   +  +   R    +    +  IACG  H +A   S  ++ ++
Sbjct: 260 EGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMDSF 319

Query: 596 GKGANGQLGHGDNENKQTPTLVE 618
           G G NGQLG     N+++P  V+
Sbjct: 320 GLGGNGQLGTRSTCNRKSPAPVK 342



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 158/327 (48%), Gaps = 23/327 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  +  +G  +  V CG  HT  +   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G++F++G G+ G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQ 115

Query: 435 LGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  +      VPR +++L +++    +CG WH+ A+         S G     +F+WG 
Sbjct: 116 LGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLAL---------SKG---GHIFSWGQ 163

Query: 494 GAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G     + VP  ++    I F ++A G + + ALT +G VF  G   +GQLG
Sbjct: 164 NRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLG 223

Query: 553 SPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
              +  + FP  ++     R I  I+CG  H A ++ +  V+T+G G  GQLGH    ++
Sbjct: 224 LNDTNDRCFPALLKALRSQRVIY-ISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAI 638
             P  V  L    V  + CG   T A 
Sbjct: 283 VNPRKVFELMGNVVTQIACGRQHTLAF 309



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 136/280 (48%), Gaps = 21/280 (7%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+  +    LG + E     PRK      G ++  + CG  HTA +   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVVEPRKCEF-FHGKRVRDVGCGRRHTAFLLEDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQIIVALSCGESHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           F+WG G++GQLG  + E  + VP  +K   D+   +VACG+  ++AL+  G +FS G   
Sbjct: 106 FSWGLGSDGQLGLNNFEECIRVPRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNR 165

Query: 548 YGQLGSPGSTGK---FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
           YGQLG  G TG+    P  ++ +++      IA G  H   ++    V+ WG+   GQLG
Sbjct: 166 YGQLGL-GMTGQSISVPQHLQ-SLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLG 223

Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
             D  ++  P L++ALR ++V  + CG + TAA+    GV
Sbjct: 224 LNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGV 263



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 123/263 (46%), Gaps = 24/263 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG G  +G LG  +N  E          +P+ ++S   +    +ACG  H++ ++
Sbjct: 103 GQVFSWGLG-SDGQLG--LNNFE------ECIRVPRNIKSLSDVQVAQVACGYWHSLALS 153

Query: 313 KQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           K G IFSWG+   G+LG G+    +S P+ + +L G     +A G  H+ A+TLSG ++ 
Sbjct: 154 KGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   +  G LG         P  +   +   ++  I CG  HTAA+T  G +FTFG G 
Sbjct: 214 WGR--NKFGQLGLNDTNDRCFPALLKA-LRSQRVIYISCGEDHTAALTKEGGVFTFGAGG 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           +G LGH   +    PR+V  L        +CG  HT A    +GK             ++
Sbjct: 271 YGQLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSGKMD-----------SF 319

Query: 492 GDGAEGQLGHGDAEPRVVPLCVK 514
           G G  GQLG      R  P  VK
Sbjct: 320 GLGGNGQLGTRSTCNRKSPAPVK 342


>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
          Length = 382

 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 107/336 (31%), Positives = 167/336 (49%), Gaps = 20/336 (5%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+V         + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL 
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALA 82

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQI 405
             +I  VACGE H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I
Sbjct: 83  DQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTI 139

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGV 464
             + CG WH  A+ + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 199

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
            H+ A+       SG+       +F WG    GQLG  D + R  P  VK+        +
Sbjct: 200 AHSFAL-----SLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYI 247

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-I 583
           +CG   T  LT +G VF+ G+   GQLG      +   R    +    +  IACG  H +
Sbjct: 248 SCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTL 307

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
           A V S   +Y +G GA GQLG G   N + P+ V+ 
Sbjct: 308 AFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  ++  VACG  H+  +   G++YT   
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYT--C 58

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
           G++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 59  GLNTKGQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 127/251 (50%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG  ++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA GQLG G
Sbjct: 320 GCGARGQLGTG 330



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 35/165 (21%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGV 274
           G+  A   +  A SF +SLS AV                  F WG            N  
Sbjct: 189 GIPLAQVAAGGAHSFALSLSGAV------------------FGWGMN----------NAG 220

Query: 275 EISSADRRDALLP---KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG 331
           ++  +D +D   P   K+L +  V+    I+CG +H  ++TK G +F++G GS G+LGH 
Sbjct: 221 QLGLSDEKDRESPCHVKLLRTQKVV---YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 332 VEADVSYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDG 375
              D   P+ +  L GS +  +ACG  HT A V  SG +Y +G G
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322


>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cucumis sativus]
          Length = 302

 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 132/230 (57%), Gaps = 15/230 (6%)

Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
           +P+K+    EG+ I  +  G  HTAA+T  G+LF +G G +G LG GDR+   VP++V +
Sbjct: 19  VPQKIQA-FEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSS 77

Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPL 511
           +   K VM +CG  HT ++  + G            L+T+G    GQLGHGD E R+VP 
Sbjct: 78  VDGDKMVMVACGWRHTISVSSLGG------------LYTYGWSKYGQLGHGDFEDRLVPH 125

Query: 512 CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKH 570
            ++     +  +++ G   T+ALT  G+++  G   +GQ+G+  +     P +I+     
Sbjct: 126 RLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQ 185

Query: 571 RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           + I+ I+CG  H   V+ K  V++WG+G NGQLGHG++ ++ TP ++EAL
Sbjct: 186 KVIQ-ISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMILEAL 234



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/234 (35%), Positives = 118/234 (50%), Gaps = 17/234 (7%)

Query: 320 WGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH-N 378
           WG    G+LG G   D   P+ I A  G +I MVA G  HT AVT  G+L+ WG G + N
Sbjct: 1   WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGN 60

Query: 379 LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG 438
           LGL  +   +   +P+KVS  ++G ++  + CG  HT +++S G L+T+G   +G LGHG
Sbjct: 61  LGLGDRNDRL---VPQKVS-SVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHG 116

Query: 439 DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ 498
           D     VP  +E L+       S G  HT A+             +  KL+ WG    GQ
Sbjct: 117 DFEDRLVPHRLEALRGDNISQISGGWRHTMALT------------TDGKLYGWGWNKFGQ 164

Query: 499 LGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
           +G GD      P+ +K   D    +++CG   T+A+T    VFS G    GQLG
Sbjct: 165 VGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLG 218



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 123/232 (53%), Gaps = 15/232 (6%)

Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
           D+L+P+ +++   +  + +A G++H   VT+ G++F WG G  G LG G   D   P+ +
Sbjct: 16  DSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKV 75

Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
            +++G  + MVACG  HT +V+  G LYT+  G    G LG        +P ++   + G
Sbjct: 76  SSVDGDKMVMVACGWRHTISVSSLGGLYTY--GWSKYGQLGHGDFEDRLVPHRLEA-LRG 132

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
             IS I  G  HT A+T+ GKL+ +G   FG +G GD      P +++  ++ K +  SC
Sbjct: 133 DNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISC 192

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
           G  HT A+ +             + +F+WG G  GQLGHG++  R  P+ ++
Sbjct: 193 GWRHTLAVTD------------KQNVFSWGRGTNGQLGHGESVDRNTPMILE 232



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 105/213 (49%), Gaps = 14/213 (6%)

Query: 427 FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
           +G    G LG G    + VP++++  + +   M + G  HTAA+ E              
Sbjct: 1   WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTE------------DG 48

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           +LF WG G  G LG GD   R+VP  V   D      VACG   TI++++ G +++ G +
Sbjct: 49  ELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWS 108

Query: 547 DYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
            YGQLG      +  P R+E  ++   I  I+ G  H   +++  ++Y WG    GQ+G 
Sbjct: 109 KYGQLGHGDFEDRLVPHRLEA-LRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGA 167

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           GDN +  +P  ++  +D++V  + CG   T A+
Sbjct: 168 GDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAV 200



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 101/201 (50%), Gaps = 15/201 (7%)

Query: 253 GDVFIWGEG-LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           G++F WG G  GN  LG           DR D L+P+ + S        +ACG +H + V
Sbjct: 48  GELFGWGWGRYGNLGLG-----------DRNDRLVPQKVSSVDGDKMVMVACGWRHTISV 96

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           +  G ++++G    G+LGHG   D   P  ++AL G NI  ++ G  HT A+T  G LY 
Sbjct: 97  SSLGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYG 156

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           W  G +  G +G    I H  P ++    +  ++  I CG  HT A+T    +F++G GT
Sbjct: 157 W--GWNKFGQVGAGDNIDHCSPIQIKFPQD-QKVIQISCGWRHTLAVTDKQNVFSWGRGT 213

Query: 432 FGALGHGDRSSTSVPREVETL 452
            G LGHG+    + P  +E L
Sbjct: 214 NGQLGHGESVDRNTPMILEAL 234


>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
           CCMP2712]
          Length = 277

 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 109/298 (36%), Positives = 151/298 (50%), Gaps = 32/298 (10%)

Query: 318 FSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG----EFHTCAVTLSGDLYTWG 373
           FSWG  + G LG G    V  P  I AL G  +  VACG    E H+ AVT  G +YTWG
Sbjct: 1   FSWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWG 60

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
            G    G LG     +  +PR + G ++   I  + CG  HT  ++ AG +F +G G FG
Sbjct: 61  SG--KSGQLGHGDSQNLVLPRLIVG-LQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFG 117

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
            LG G   +++ P +V +L  +K    +CG  HTA + E            S  ++TWG 
Sbjct: 118 QLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTE------------SGHVYTWGW 165

Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ-VFSMGSADYGQLG 552
           G  GQLGHGD   +  P+ VK    I    +ACG + T+ ++   + VFS G  +YGQLG
Sbjct: 166 GVNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLG 225

Query: 553 SPGSTGKFPTRIEGNIKHRY------IEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
             G        I G  K+R       ++ IACGS +   +SS+ +VY +G G +GQLG
Sbjct: 226 HGG------WDIFGGNKNRSPRPIKDLQQIACGSSYTLALSSRGDVYAFGWGKDGQLG 277



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/266 (35%), Positives = 144/266 (54%), Gaps = 36/266 (13%)

Query: 300 SIACGS----KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
           S+ACG     +H+  VT+QGQ+++WG G  G+LGHG   ++  P+LI  L  + I  VAC
Sbjct: 35  SVACGGGSEEQHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVAC 94

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
           G  HT  V+ +G ++ WG G  + G LG  S  +   P +V+  ++G+++  + CG  HT
Sbjct: 95  GSAHTVVVSKAGLVFAWGWG--HFGQLGVGSTHNSNDPVQVT-SLDGVKVCKVACGSAHT 151

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A +T +G ++T+G G  G LGHGD +S S P  V+ L  +     +CG+ HT  + EV  
Sbjct: 152 AVVTESGHVYTWGWGVNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEV-- 209

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAE---------PRVVPLCVKVSDDISFCKVAC 526
                     + +F+WG    GQLGHG  +         PR +        D+   ++AC
Sbjct: 210 ---------DRAVFSWGWDEYGQLGHGGWDIFGGNKNRSPRPI-------KDLQ--QIAC 251

Query: 527 GHSITIALTATGQVFSMGSADYGQLG 552
           G S T+AL++ G V++ G    GQLG
Sbjct: 252 GSSYTLALSSRGDVYAFGWGKDGQLG 277



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 112/220 (50%), Gaps = 20/220 (9%)

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW----HTAAIVEVAGKTSGS 480
           F++G    GALG G   +   P  +  L+ L  V  +CG      H+AA+ E        
Sbjct: 1   FSWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTE-------- 52

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
                 +++TWG G  GQLGHGD++  V+P  +         +VACG + T+ ++  G V
Sbjct: 53  ----QGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAGLV 108

Query: 541 FSMGSADYGQLGSPGST--GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           F+ G   +GQLG  GST     P ++  ++    +  +ACGS H AVV+    VYTWG G
Sbjct: 109 FAWGWGHFGQLGV-GSTHNSNDPVQVT-SLDGVKVCKVACGSAHTAVVTESGHVYTWGWG 166

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            NGQLGHGD+ ++  P  V+ L    V ++ CG   T  +
Sbjct: 167 VNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVV 206



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 121/250 (48%), Gaps = 29/250 (11%)

Query: 400 MEGLQISSICCG----PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
           ++GL + S+ CG      H+AA+T  G+++T+G G  G LGHGD  +  +PR +  L+  
Sbjct: 28  LQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVLPRLIVGLQSN 87

Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
             V  +CG  HT  +V  AG            +F WG G  GQLG G       P+ V  
Sbjct: 88  PIVEVACGSAHTV-VVSKAGL-----------VFAWGWGHFGQLGVGSTHNSNDPVQVTS 135

Query: 516 SDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIED 575
            D +  CKVACG + T  +T +G V++ G    GQLG      +        +   Y+  
Sbjct: 136 LDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDASQSRPMYVKKLHGIYVST 195

Query: 576 IACGSYHIAVVSSKSE-VYTWGKGANGQLGH------GDNENKQTPTLVEALRDKQVKSV 628
           +ACG  H  VVS     V++WG    GQLGH      G N+N+    +      K ++ +
Sbjct: 196 LACGLAHTVVVSEVDRAVFSWGWDEYGQLGHGGWDIFGGNKNRSPRPI------KDLQQI 249

Query: 629 VCGSNFTAAI 638
            CGS++T A+
Sbjct: 250 ACGSSYTLAL 259



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 134/255 (52%), Gaps = 38/255 (14%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKV---LESTVVLDAQSIACGSKHAV 309
           G V+ WG G             ++   D ++ +LP++   L+S  +++   +ACGS H V
Sbjct: 54  GQVYTWGSGKSG----------QLGHGDSQNLVLPRLIVGLQSNPIVE---VACGSAHTV 100

Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
           +V+K G +F+WG G  G+LG G   + + P  + +L+G  +  VACG  HT  VT SG +
Sbjct: 101 VVSKAGLVFAWGWGHFGQLGVGSTHNSNDPVQVTSLDGVKVCKVACGSAHTAVVTESGHV 160

Query: 370 YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGK-LFTFG 428
           YTWG G++  G LG   + S   P  V  ++ G+ +S++ CG  HT  ++   + +F++G
Sbjct: 161 YTWGWGVN--GQLGHGDDASQSRPMYVK-KLHGIYVSTLACGLAHTVVVSEVDRAVFSWG 217

Query: 429 DGTFGALGHG--DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
              +G LGHG  D    +  R    +K+L+ +  +CG  +T A             LSS+
Sbjct: 218 WDEYGQLGHGGWDIFGGNKNRSPRPIKDLQQI--ACGSSYTLA-------------LSSR 262

Query: 487 -KLFTWGDGAEGQLG 500
             ++ +G G +GQLG
Sbjct: 263 GDVYAFGWGKDGQLG 277


>gi|363728661|ref|XP_416780.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC418578
           [Gallus gallus]
          Length = 1212

 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 163/339 (48%), Gaps = 29/339 (8%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+CG +H  +VT  G+++ +G    G+LG G +  V  P  + AL      +  CG  HT
Sbjct: 44  ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHT 103

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
              T  G++Y  G        LG   E + +    +S      +I  +  G + +AA+T 
Sbjct: 104 LVYTEKGNVYAAGGNSEGQLGLGDTEERTTF--HLISFFTNQHKIKQLAAGSYTSAAVTE 161

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            G+LF +GD + G +G  D++  SVP +V+  K + ++  SCG +H+A I          
Sbjct: 162 DGQLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVSSI--SCGYYHSAFIT--------- 210

Query: 481 NGLSSKKLFTWGDGAEGQLG---HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
                 +L+T+G+   G+LG         RV    + + + ++  KVACG   T+ LT T
Sbjct: 211 ---GDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVN--KVACGGEHTVVLTET 265

Query: 538 GQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH---RYIEDIACGSYHIAVVSSKSEVYT 594
           G V++ G   YGQLG    T  F T +  ++KH     I ++ CG  H AV++    ++T
Sbjct: 266 G-VYTFGLGQYGQLGH--GTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIAENGLMFT 322

Query: 595 WGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCG 631
           +G G +G+LG G+    N+  P L        V  V CG
Sbjct: 323 FGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACG 361



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/244 (36%), Positives = 133/244 (54%), Gaps = 30/244 (12%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + +A GS  +  VT+ GQ+F WG+ S G++G   +  VS P  +D   G  +  ++CG +
Sbjct: 147 KQLAAGSYTSAAVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQVDV--GKPVSSISCGYY 204

Query: 359 HTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           H+  +T  G+LYT+G+  +  LGLL +  + S  +P+ V G ME  +++ + CG  HT  
Sbjct: 205 HSAFITGDGELYTFGEPENGKLGLLPEQLKNSR-VPQPVLGIME--KVNKVACGGEHTVV 261

Query: 418 ITSAGKLFTFGDGTFGALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           +T  G ++TFG G +G LGHG     TSVP+ V+ L+  K    +CG  HTA I E    
Sbjct: 262 LTETG-VYTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVIAE---- 316

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCK--VACG--HS 529
               NGL    +FT+GDG  G+LG G+   A      LC   S+ +SF    VACG  H 
Sbjct: 317 ----NGL----MFTFGDGRHGKLGLGEENFANQFDPALC---SNFLSFTVLLVACGGCHM 365

Query: 530 ITIA 533
           +  A
Sbjct: 366 LVFA 369



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 125/276 (45%), Gaps = 50/276 (18%)

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
           I CG  HTA +T  GKL+ FG   +G LG G +++   P  V+ LK  KT +A CG  HT
Sbjct: 44  ISCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAVCGRNHT 103

Query: 468 AAIVE------VAGKTSGSNGLSSK----------------------------------- 486
               E        G + G  GL                                      
Sbjct: 104 LVYTEKGNVYAAGGNSEGQLGLGDTEERTTFHLISFFTNQHKIKQLAAGSYTSAAVTEDG 163

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           +LF WGD +EGQ+G  D     VP  V V   +S   ++CG+  +  +T  G++++ G  
Sbjct: 164 QLFVWGDNSEGQIGLADKTCVSVPCQVDVGKPVS--SISCGYYHSAFITGDGELYTFGEP 221

Query: 547 DYGQLG---SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           + G+LG         + P  + G ++   +  +ACG  H  VV +++ VYT+G G  GQL
Sbjct: 222 ENGKLGLLPEQLKNSRVPQPVLGIMEK--VNKVACGGEH-TVVLTETGVYTFGLGQYGQL 278

Query: 604 GHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAAI 638
           GHG    K + P  V+ LR  ++ +V CG + TA I
Sbjct: 279 GHGTLLFKTSVPKSVKHLRSHKIHNVTCGESHTAVI 314



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 29/195 (14%)

Query: 230 RISLSSAVSSSSQGSCHEDF-DGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK 288
           ++ +   VSS S G  H  F  G G+++ +GE   NG LG                LLP+
Sbjct: 189 QVDVGKPVSSISCGYYHSAFITGDGELYTFGEP-ENGKLG----------------LLPE 231

Query: 289 VLEST--------VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYP 339
            L+++        ++     +ACG +H V++T+ G ++++G G  G+LGHG +    S P
Sbjct: 232 QLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTETG-VYTFGLGQYGQLGHGTLLFKTSVP 290

Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ 399
           K +  L    IH V CGE HT  +  +G ++T+GDG H    LG+ +  + + P   S  
Sbjct: 291 KSVKHLRSHKIHNVTCGESHTAVIAENGLMFTFGDGRHGKLGLGEENFANQFDPALCSNF 350

Query: 400 MEGLQISSICCGPWH 414
           +    +  + CG  H
Sbjct: 351 L-SFTVLLVACGGCH 364


>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
          Length = 368

 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 165/336 (49%), Gaps = 20/336 (5%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+V         + +ACG  H+V + + G++++ G  + G+LGH  E + + P+ I AL 
Sbjct: 25  PQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALA 82

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQI 405
             +I  VACGE H+ A++  G L++WG G    LGL+   +E S  +PR +  ++    I
Sbjct: 83  DQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTI 139

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGV 464
             + CG WH  A+ + G+ FT+G  + G LG G +  S + P+ V +L+ +     + G 
Sbjct: 140 LQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 199

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
            H+ A+              S  +F WG    GQLG  D + R  P  VK+        +
Sbjct: 200 AHSFALS------------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYI 247

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-I 583
           +CG   T  LT +G VF+ G+   GQLG      +   R    +    +  IACG  H +
Sbjct: 248 SCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTL 307

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
           A V S   +Y +G GA GQLG G   N + P+ V+ 
Sbjct: 308 AFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKG 343



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 23/336 (6%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+ G    ++  V+ P++   ++  ++  VACG  H+  +   G++YT   
Sbjct: 1   MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYT--C 58

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
           G++  G LG   E +   P ++ G +    I  + CG  H+ A++  G+LF++G G+ G 
Sbjct: 59  GLNTKGQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115

Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG      S +VPR ++ L +   +  SCG WH  A+             +  + FTWG 
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G   P +  P  V+  + I   +VA G + + AL+ +G VF  G  + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223

Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S     + P  ++  ++ + +  I+CG  H AV++    V+T+G G+ GQLGH    ++
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             P  V  L   +V  + CG   T A     G+  A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 127/251 (50%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +   E S A  R  L+ K+ + T++     ++CG+ H + + 
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             GQ F+WG+ S G+LG G E    + P+ + +L G  +  VA G  H+ A++LSG ++ 
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG  ++N G LG   E     P  V   +   ++  I CG  HTA +T +G +FTFG G+
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGH   +    PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319

Query: 492 GDGAEGQLGHG 502
           G GA GQLG G
Sbjct: 320 GCGARGQLGTG 330



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 35/165 (21%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGV 274
           G+  A   +  A SF +SLS AV                  F WG            N  
Sbjct: 189 GIPLAQVAAGGAHSFALSLSGAV------------------FGWGMN----------NAG 220

Query: 275 EISSADRRDALLP---KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG 331
           ++  +D +D   P   K+L +  V+    I+CG +H  ++TK G +F++G GS G+LGH 
Sbjct: 221 QLGLSDEKDRESPCHVKLLRTQKVV---YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277

Query: 332 VEADVSYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDG 375
              D   P+ +  L GS +  +ACG  HT A V  SG +Y +G G
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322


>gi|356497843|ref|XP_003517766.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 388

 Score =  145 bits (367), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 120/376 (31%), Positives = 185/376 (49%), Gaps = 42/376 (11%)

Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPK 340
           +D   P++L    +    S+ACG  H + +T  G++ SWG G+ G+LGHG V ++  YPK
Sbjct: 37  QDEHFPQLLHQPSLSSISSLACGGAHVIALTSAGKVLSWGRGNSGQLGHGLVVSNSLYPK 96

Query: 341 LIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM 400
            + +L+G  I  V+ G  H+  V+ +G ++T GDG  + G LG     SH  P KVS  +
Sbjct: 97  AVTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDG--SFGQLGHGDHASHCSPVKVSCFV 154

Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG-HGDR-SSTSVPREVETLKELKTV 458
           +   +  + CG  H+  +    +++ FG G  G LG   DR  S +VP+ V   + ++  
Sbjct: 155 D-QHVEQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVEIA 213

Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
             +    H+AA V V G            ++TWG G +G       E   VP C+  S  
Sbjct: 214 GIAANGDHSAA-VSVDG-----------HVYTWGRGFKG------FEDARVPQCLNSS-- 253

Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLG-----SPGSTGKFPTRIEGNIKH--- 570
           ++F KVA G +  +A++  G+V  +G    G L      SP      P   E N++    
Sbjct: 254 LNFTKVALGWNHALAMSGEGEVCMLGGNHLGVLSDLQNISPAK--HLPHLREVNLEKVPG 311

Query: 571 ---RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRD-KQVK 626
                I DIA G+ H  +V+   E+ TWG G +GQLG GD  ++ +P  V    D  +  
Sbjct: 312 LDGTKITDIATGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRDRISPVTVSLGYDLNEAA 371

Query: 627 SVV--CGSNFTAAICL 640
           SV+  CGS FT A+ +
Sbjct: 372 SVIVFCGSGFTFAVTM 387



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 7/184 (3%)

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
           S +++++WG G EGQLG    +    P  +      S   +ACG +  IALT+ G+V S 
Sbjct: 16  SEQRVWSWGAGTEGQLGTKILQDEHFPQLLHQPSLSSISSLACGGAHVIALTSAGKVLSW 75

Query: 544 GSADYGQLGSP--GSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           G  + GQLG     S   +P  +  ++   +I  ++ G  H   VS    V+T G G+ G
Sbjct: 76  GRGNSGQLGHGLVVSNSLYPKAVT-SLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFG 134

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
           QLGHGD+ +  +P  V    D+ V+ V CG     ++ L KG  +  +   SG R Q   
Sbjct: 135 QLGHGDHASHCSPVKVSCFVDQHVEQVACG--MRHSLVLLKGNQV--YGFGSGKRGQLGV 190

Query: 662 RRRR 665
              R
Sbjct: 191 SNDR 194



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 148/354 (41%), Gaps = 71/354 (20%)

Query: 235 SAVSSSSQGSCHE-DFDGLGDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKV 289
           S++SS + G  H       G V  WG G    LG+GL+               ++L PK 
Sbjct: 51  SSISSLACGGAHVIALTSAGKVLSWGRGNSGQLGHGLV-------------VSNSLYPKA 97

Query: 290 LESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN 349
           + S        ++ G  H+  V+  G +F+ G+GS G+LGHG  A    P  +      +
Sbjct: 98  VTSLDGYFITHVSAGWGHSGFVSDNGCVFTCGDGSFGQLGHGDHASHCSPVKVSCFVDQH 157

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLG----QVSEISHWIPRKVSGQMEGLQI 405
           +  VACG  H+  +     +Y +G G    G LG    +V  ++  +P+ VSG  EG++I
Sbjct: 158 VEQVACGMRHSLVLLKGNQVYGFGSG--KRGQLGVSNDRVKSVN--VPKVVSG-FEGVEI 212

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFG-------------------ALGHGDRSSTSVP 446
           + I     H+AA++  G ++T+G G  G                   ALG     + S  
Sbjct: 213 AGIAANGDHSAAVSVDGHVYTWGRGFKGFEDARVPQCLNSSLNFTKVALGWNHALAMSGE 272

Query: 447 REV--------ETLKELKTVMASCGVWHT-------------AAIVEVAGKTSGSNGLSS 485
            EV          L +L+ +  +  + H                I ++A     S  ++ 
Sbjct: 273 GEVCMLGGNHLGVLSDLQNISPAKHLPHLREVNLEKVPGLDGTKITDIATGAEHSVIVTE 332

Query: 486 K-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK---VACGHSITIALT 535
             ++ TWG G  GQLG GD   R+ P+ V +  D++      V CG   T A+T
Sbjct: 333 HGEIKTWGWGEHGQLGLGDTRDRISPVTVSLGYDLNEAASVIVFCGSGFTFAVT 386


>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2298

 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 162/339 (47%), Gaps = 30/339 (8%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-- 373
           +++S G+ S G+LGHG  A     + I AL    I  +  G  HT  +T  G ++T G  
Sbjct: 374 EVWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGYN 433

Query: 374 -DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            +G    G   +VS +S  IP+  SG  +    +    G  HT  +++ G++ T G    
Sbjct: 434 DNGQCGQGGTARVSHLSE-IPKMDSGSSQAHAYN----GCEHTILVSTDGRVATCGYNYR 488

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           G LGHG+ +S SVP+ + +L+     + SC  +HT    E        +G + + L+T+G
Sbjct: 489 GQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLACE--------DG-NLQNLYTFG 539

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
               GQLGH D+  R +P  V+   D     VACG   T+ +T +G+ F+ G  DYGQLG
Sbjct: 540 RNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLG 599

Query: 553 SPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
                 +  P ++ G ++ +   +I CG YH   + S + ++ +G+   GQLG G +   
Sbjct: 600 IDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNAS 659

Query: 612 QTPT------------LVEALRDKQVKSVVCGSNFTAAI 638
            T              L++ L  K +  + CG   T A+
Sbjct: 660 STSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAV 698



 Score =  142 bits (359), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 164/355 (46%), Gaps = 32/355 (9%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN-GSNIHMVACGEFH 359
           I  G++H V++T  G++F+ G    G+ G G  A VS+   I  ++ GS+      G  H
Sbjct: 411 IGAGNEHTVVLTADGKVFTCGYNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEH 470

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           T  V+  G + T G      G LG  +  S  +P K+   +E   +  + C  +HT    
Sbjct: 471 TILVSTDGRVATCGYNYR--GQLGHGNTTSESVP-KIIRSLENKIVRLVSCSYYHTVLAC 527

Query: 420 SAGKL---FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
             G L   +TFG   +G LGH D     +P+ VE L + + V  +CG +HT  +V V+GK
Sbjct: 528 EDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTM-VVTVSGK 586

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC-KVACGHSITIALT 535
                       F +G    GQLG    E ++ P+ V+   +   C ++ CG+  TIAL 
Sbjct: 587 A-----------FAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALC 635

Query: 536 ATGQVFSMGSADYGQLG----SPGSTGKFP--------TRIEGNIKHRYIEDIACGSYHI 583
           +   +F+ G  DYGQLG    +  ST             R+   ++ + I  IACG YH 
Sbjct: 636 SGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHT 695

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             VS    +Y +G+  +GQLG GD   +  P  ++    K++  V  G   T  +
Sbjct: 696 IAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKRIALVAAGFYHTVVL 750



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 143/305 (46%), Gaps = 33/305 (10%)

Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAV 363
           G +H +LV+  G++ + G    G+LGHG     S PK+I +L    + +V+C  +HT   
Sbjct: 467 GCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLA 526

Query: 364 TLSG---DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
              G   +LYT+G   ++ G LG    I   IP+ V   +   QI S+ CG +HT  +T 
Sbjct: 527 CEDGNLQNLYTFGR--NDYGQLGHNDSIDRKIPQFVEA-LSDQQIVSVACGQYHTMVVTV 583

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVE-TLKELKTVMASCGVWHTAAIVEVAGKTSG 479
           +GK F FG   +G LG     +   P +V   L+  + +   CG +HT A+         
Sbjct: 584 SGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRCGYYHTIALC-------- 635

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC---------VKVSDDI---SFCKVACG 527
               S   LF +G    GQLG G +                  ++ D++      ++ACG
Sbjct: 636 ----SGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACG 691

Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVV 586
              TIA++  G ++  G  ++GQLG+  +T + +P  I+  +  R I  +A G YH  V+
Sbjct: 692 CYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGKR-IALVAAGFYHTVVL 750

Query: 587 SSKSE 591
           +   E
Sbjct: 751 TGGKE 755



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 29/265 (10%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQG---QIFSWGEGSGGKLGHGVEADVSYPKLI 342
           +PK++ S      + ++C   H VL  + G    ++++G    G+LGH    D   P+ +
Sbjct: 501 VPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFV 560

Query: 343 DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
           +AL+   I  VACG++HT  VT+SG  + +G   ++ G LG  +  +   P +V G +E 
Sbjct: 561 EALSDQQIVSVACGQYHTMVVTVSGKAFAFGK--NDYGQLGIDTMENQLAPVQVRGGLER 618

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV------------PREVE 450
            +   I CG +HT A+ S   LF FG   +G LG G  +++S              R ++
Sbjct: 619 QECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFSNARLID 678

Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
            L+    V  +CG +HT A+          NG+    ++ +G    GQLG GD   RV P
Sbjct: 679 ELEGKDIVRIACGCYHTIAV--------SDNGV----MYVFGRNNHGQLGTGDTTERVYP 726

Query: 511 LCVKVSDDISFCKVACGHSITIALT 535
             +          VA G   T+ LT
Sbjct: 727 FPIDDFVGKRIALVAAGFYHTVVLT 751



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 12/217 (5%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVE 333
           ++   D  D  +P+ +E+       S+ACG  H ++VT  G+ F++G+   G+LG   +E
Sbjct: 545 QLGHNDSIDRKIPQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTME 604

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEIS---- 389
             ++  ++   L       + CG +HT A+     L+ +G   +    LG+ +  S    
Sbjct: 605 NQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNL 664

Query: 390 -----HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS 444
                 +   ++  ++EG  I  I CG +HT A++  G ++ FG    G LG GD +   
Sbjct: 665 QLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERV 724

Query: 445 VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            P  ++     +  + + G +HT  +V   GK    N
Sbjct: 725 YPFPIDDFVGKRIALVAAGFYHT--VVLTGGKEDDKN 759



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 11/160 (6%)

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
           +++++ G  + G+LGHGD   R     ++        ++  G+  T+ LTA G+VF+ G 
Sbjct: 373 REVWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCGY 432

Query: 546 ADYGQLGSPGST-----GKFPTRIEGNIK-HRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
            D GQ G  G+       + P    G+ + H Y      G  H  +VS+   V T G   
Sbjct: 433 NDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAY-----NGCEHTILVSTDGRVATCGYNY 487

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            GQLGHG+  ++  P ++ +L +K V+ V C    T   C
Sbjct: 488 RGQLGHGNTTSESVPKIIRSLENKIVRLVSCSYYHTVLAC 527


>gi|390333856|ref|XP_788386.3| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Strongylocentrotus purpuratus]
          Length = 782

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 167/343 (48%), Gaps = 45/343 (13%)

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           V++T+ G+++ +G    G+LG G    V+ P  +  L  + +  +ACG  HT A+T    
Sbjct: 43  VVITENGRLYVFGANDWGQLGLGHRKSVNKPSSVKGLKHAGVVKIACGRVHTIALTKDRH 102

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           L+++G G    G LG      +  PR +  ++E      + CG  H+AA+T++G L+ +G
Sbjct: 103 LHSFGAG--GEGQLGVGDSKQYEAPRMIE-ELEEQDYLLLSCGTDHSAALTASGTLYMWG 159

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
            G+ G LGHG+ +   +PRE+     ++  M SCG +HTA + E             KKL
Sbjct: 160 GGSEGQLGHGEDTEVQIPRELSMGVPVR--MVSCGYYHTALLTE------------DKKL 205

Query: 489 FTW-------GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
           +T+           E  LG G  EP+ V    +  D +S     CG++ T A+T  G V+
Sbjct: 206 YTFGEGEGGKLGLGEAHLG-GVNEPQHVSFFTEPVDSVS-----CGNAHTAAITEKGHVY 259

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIED-------IACGSYHIAVVSSKSEVYT 594
           + G+   GQLG        P  +E NI  R           ++CG  H A+V++K  +YT
Sbjct: 260 TFGNGASGQLGH------GPDHLETNIPKRVARLEWTRCKWVSCGDCHTAIVTAKGCLYT 313

Query: 595 WGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCGSNFT 635
           +G G +G+LG G+    N  TP+ V       V+ V CG   T
Sbjct: 314 FGDGRHGKLGQGEESFSNVFTPSKVHRFNGFLVEEVSCGGCHT 356



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 147/293 (50%), Gaps = 29/293 (9%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           IACG  H + +TK   + S+G G  G+LG G       P++I+ L   +  +++CG  H+
Sbjct: 87  IACGRVHTIALTKDRHLHSFGAGGEGQLGVGDSKQYEAPRMIEELEEQDYLLLSCGTDHS 146

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T SG LY WG G  + G LG   +    IPR++S    G+ +  + CG +HTA +T 
Sbjct: 147 AALTASGTLYMWGGG--SEGQLGHGEDTEVQIPRELS---MGVPVRMVSCGYYHTALLTE 201

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSV--PREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
             KL+TFG+G  G LG G+     V  P+ V    E      SCG  HTAAI E      
Sbjct: 202 DKKLYTFGEGEGGKLGLGEAHLGGVNEPQHVSFFTE-PVDSVSCGNAHTAAITEKG---- 256

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCK-VACGHSITIALTA 536
                    ++T+G+GA GQLGHG D     +P  V    + + CK V+CG   T  +TA
Sbjct: 257 --------HVYTFGNGASGQLGHGPDHLETNIPKRV-ARLEWTRCKWVSCGDCHTAIVTA 307

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY----IEDIACGSYHIAV 585
            G +++ G   +G+LG       F      +  HR+    +E+++CG  H  V
Sbjct: 308 KGCLYTFGDGRHGKLGQ--GEESFSNVFTPSKVHRFNGFLVEEVSCGGCHTLV 358



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 64/109 (58%), Gaps = 4/109 (3%)

Query: 532 IALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
           + +T  G+++  G+ D+GQLG     S  K P+ ++G +KH  +  IACG  H   ++  
Sbjct: 43  VVITENGRLYVFGANDWGQLGLGHRKSVNK-PSSVKG-LKHAGVVKIACGRVHTIALTKD 100

Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             ++++G G  GQLG GD++  + P ++E L ++    + CG++ +AA+
Sbjct: 101 RHLHSFGAGGEGQLGVGDSKQYEAPRMIEELEEQDYLLLSCGTDHSAAL 149



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 56/110 (50%), Gaps = 11/110 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ +G G  +G LG   + +E +        +PK +        + ++CG  H  +VT
Sbjct: 256 GHVYTFGNG-ASGQLGHGPDHLETN--------IPKRVARLEWTRCKWVSCGDCHTAIVT 306

Query: 313 KQGQIFSWGEGSGGKLGHGVE--ADVSYPKLIDALNGSNIHMVACGEFHT 360
            +G ++++G+G  GKLG G E  ++V  P  +   NG  +  V+CG  HT
Sbjct: 307 AKGCLYTFGDGRHGKLGQGEESFSNVFTPSKVHRFNGFLVEEVSCGGCHT 356


>gi|403353075|gb|EJY76071.1| hypothetical protein OXYTRI_02425 [Oxytricha trifallax]
          Length = 794

 Score =  145 bits (366), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 184/398 (46%), Gaps = 46/398 (11%)

Query: 275 EISSADRRDALLPK---VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG-- 329
           E+  + ++D  LPK   +    +   A+ I+ GS H+ +VTK G+++  G    GKLG  
Sbjct: 178 ELGISSQKDQFLPKPISIQNLKLSHTAKYISSGSHHSAIVTKAGELYVSGSQLHGKLGIQ 237

Query: 330 --HGVE-ADVSYPKLIDALN-GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
             +G+  +  +   + D +     +  VACG++HT  +   G ++ WG  +H   +  + 
Sbjct: 238 SVNGMHVSKFTQVTMFDGIKVNQKVKQVACGDYHTLCLMQDGQVFAWGGTLHK-KVGEKN 296

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG----TFGALGHGDRS 441
           ++  +  PR VSG ++G QI  I CG +H+ A+   G+++++G G      G  GHG+  
Sbjct: 297 AQAQNNEPRIVSG-LQGKQIVHIDCGDFHSVALDIQGRVYSWGGGGASYNKGQCGHGNNE 355

Query: 442 STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH 501
               P +V+ +   K V  S G +HT A+ E              +L+ WG G  G+ G 
Sbjct: 356 DIEQPIQVQGIAHRKIVQISAGGFHTLALCE-----------EDNELYAWGSGTYGECGL 404

Query: 502 GDAEPRVVPLCVKVSDDIS--------------------FCKVACGHSITIALTATGQVF 541
           G+ +    P  VK+  D                        +++ G   T+ LT+ G+V+
Sbjct: 405 GEFQASSKPKIVKMPKDFVSNQEMNQMQNEFAFSSQKPLITQISAGGHHTLLLTSRGRVY 464

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           S G   +GQLG   +      ++  ++  + I+ IA G  H  ++S K +++  G G +G
Sbjct: 465 SFGYGSHGQLGLRSTKNFCSPQLVKDLLSKNIKAIAAGWNHSLILSDKGDLFACGYGNHG 524

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
           QLG  D E +   T V  L  K   ++  G N +  + 
Sbjct: 525 QLGLNDKEPRTQFTHVANLGGKNAYNIYAGGNHSWVVI 562



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 28/236 (11%)

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPR--EVETLKELKTVMASCGVWHTAAIVEVAGK 476
           T    +++FG  + G LG   +    +P+   ++ LK   T        H +AIV  AG+
Sbjct: 163 TKKAYIWSFGKNSDGELGISSQKDQFLPKPISIQNLKLSHTAKYISSGSHHSAIVTKAGE 222

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLG-------HGDAEPRVVPL-CVKVSDDISFCKVACGH 528
                      L+  G    G+LG       H     +V     +KV+  +   +VACG 
Sbjct: 223 -----------LYVSGSQLHGKLGIQSVNGMHVSKFTQVTMFDGIKVNQKVK--QVACGD 269

Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVS 587
             T+ L   GQVF+ G   + ++G   +  +    RI   ++ + I  I CG +H   + 
Sbjct: 270 YHTLCLMQDGQVFAWGGTLHKKVGEKNAQAQNNEPRIVSGLQGKQIVHIDCGDFHSVALD 329

Query: 588 SKSEVYTWGKGA----NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            +  VY+WG G      GQ GHG+NE+ + P  V+ +  +++  +  G   T A+C
Sbjct: 330 IQGRVYSWGGGGASYNKGQCGHGNNEDIEQPIQVQGIAHRKIVQISAGGFHTLALC 385


>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
 gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
          Length = 1055

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 177/366 (48%), Gaps = 25/366 (6%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           ++ WG    +G LG  + G+E         ++P+ ++ +   +   + CG+ H + +TK+
Sbjct: 3   IYCWGNT-AHGELG--LGGIE-----EEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKE 54

Query: 315 GQIFSWGEGSGGKLGHGVEADVS-YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           G++++ G    G+LGH ++   +  P+ + +L    I  ++CG  H+ A+T  G +++WG
Sbjct: 55  GKMYACGNNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWG 114

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
              + +G LG  +E       ++   +    +  I  G +H  A+T+ G+L+ +G  ++G
Sbjct: 115 S--NAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGSNSYG 172

Query: 434 ALGHGDRSS-TSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            LG G  S    +P  +++L  +     +CG  H+ A+ +            S  +F WG
Sbjct: 173 QLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSK------------SGAIFGWG 220

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
               GQLG  D   R  P  ++    +    ++CG   ++ LT  G VF+ G+  +GQLG
Sbjct: 221 KNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLG 280

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENK 611
               + +   R    +    I  IACG  H +A V S+ ++Y +G G  GQLG G   N 
Sbjct: 281 HGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGNH 340

Query: 612 QTPTLV 617
            TP +V
Sbjct: 341 STPQIV 346



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 157/335 (46%), Gaps = 26/335 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           I+ WG  + G+LG G   E  V  P+ +D      +  V CG  HT  +T  G +Y  G+
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQ---ISSICCGPWHTAAITSAGKLFTFGDGT 431
             H     GQ+      +P K   ++  L+   I+ I CG  H+ A+T+ G++F++G   
Sbjct: 63  NDH-----GQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNA 117

Query: 432 FGALGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            G LGH  +      PR ++ +     V  + G +H  A+         +NG    +L+ 
Sbjct: 118 VGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALT--------NNG----ELYA 165

Query: 491 WGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
           WG  + GQLG G    +V +P  ++    +    +ACG + + A++ +G +F  G   +G
Sbjct: 166 WGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFG 225

Query: 550 QLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           QLG      + +PT++   ++   +  I+CG      ++++  V+T G G  GQLGHG  
Sbjct: 226 QLGLNDLNSRCYPTQLR-TLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHGSC 284

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
            N+  P  V  L   ++  + CG   T A    +G
Sbjct: 285 SNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRG 319



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 87/281 (30%), Positives = 133/281 (47%), Gaps = 20/281 (7%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +Y WG+  H    LG + E    +PRK+    +  ++  + CG  HT  +T  GK++  G
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWS-QADEVVRVECGTSHTLFLTKEGKMYACG 61

Query: 429 DGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           +   G LGH  D      P+ + +L+       SCG  H+ A+                +
Sbjct: 62  NNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWG------------Q 109

Query: 488 LFTWGDGAEGQLGHGDAEP--RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
           +F+WG  A GQLGH DAE   +  P  +K        ++A G    +ALT  G++++ GS
Sbjct: 110 VFSWGSNAVGQLGH-DAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWGS 168

Query: 546 ADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
             YGQLG   ++ K   PT I+ ++    I  IACG  H   VS    ++ WGK   GQL
Sbjct: 169 NSYGQLGIGTTSEKVPMPTLIQ-SLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQL 227

Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           G  D  ++  PT +  LR   V+ + CG +F+  +    GV
Sbjct: 228 GLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGV 268



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 123/263 (46%), Gaps = 24/263 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG      L   A NG + +         P+++++        IA G  H + +T
Sbjct: 108 GQVFSWGSNAVGQLGHDAENGRQPT---------PRMIKAIGAKHVVQIASGQYHCLALT 158

Query: 313 KQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             G++++WG  S G+LG G  ++ V  P LI +L G  I  +ACG  H+ AV+ SG ++ 
Sbjct: 159 NNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFG 218

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   +  G LG     S   P ++   +  L +  I CG   +  +T+ G +FT G GT
Sbjct: 219 WGK--NTFGQLGLNDLNSRCYPTQLR-TLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGT 275

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           FG LGHG  S+  VPR+V  L   K    +CG  HT A V   GK  G           +
Sbjct: 276 FGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYG-----------F 324

Query: 492 GDGAEGQLGHGDAEPRVVPLCVK 514
           G G  GQLG G       P  V+
Sbjct: 325 GLGGVGQLGIGMVGNHSTPQIVR 347


>gi|42568678|ref|NP_200895.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|10176914|dbj|BAB10107.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010005|gb|AED97388.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 445

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 178/357 (49%), Gaps = 58/357 (16%)

Query: 316 QIFSWGEGSGGKLGHGVE---------------ADVSY-----PKLIDALNGSNIHMVAC 355
           Q+FSWG G+ G+LG G+E               +D S+     P  IDA + S    ++C
Sbjct: 49  QLFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGISC 108

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
           G FH+  +T+ GDL+ WG G  + G LG   E S ++P  ++   E   I  I  G  H+
Sbjct: 109 GLFHS-GLTIDGDLWIWGKG--DGGRLGFGQENSVFVP-NLNPLFEEHSIRCIALGGLHS 164

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK-TVMASCGVWHTAAIVEVA 474
            A+T  G +FT+G G FGALGH   +   VPR V+   + K + +A+ G  HTAAI E  
Sbjct: 165 VALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGT-HTAAITE-- 221

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQL------------GHGDAEP-RVVPLCVKVSDDISF 521
                     S +L+ WG   EG              G G + P +V  L V V+     
Sbjct: 222 ----------SGELYMWGR-EEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVA----- 265

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
             V+CG   T+ALT  GQ+++ G+    +LG   + G +      +++   I  IACG Y
Sbjct: 266 -SVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGY 324

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           H   ++ + +V +WG G +GQLG     N++ PT +EAL DK++  +  G + +AAI
Sbjct: 325 HSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAI 381



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 125/412 (30%), Positives = 192/412 (46%), Gaps = 47/412 (11%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK-----VLESTVVLDAQS------IAC 303
           +F WG G  +G LGG +  + +  +   + L        + ++   +DA S      I+C
Sbjct: 50  LFSWGRG-ASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGISC 108

Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAV 363
           G  H+ L T  G ++ WG+G GG+LG G E  V  P L       +I  +A G  H+ A+
Sbjct: 109 GLFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVAL 167

Query: 364 TLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGK 423
           T  GD++TWG G    G LG        +PR+V    +  +IS+I     HTAAIT +G+
Sbjct: 168 THQGDVFTWGYG--GFGALGHKVYTRELVPRRVDDSWD-CKISAIATSGTHTAAITESGE 224

Query: 424 LFTFG-------DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           L+ +G        G     G  +    SVP +V+ L  +     SCG + T A+ +    
Sbjct: 225 LYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTK---- 279

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
                     +L+ WG  +  +LG GD      P+ V   + +   ++ACG   ++ALT 
Sbjct: 280 --------EGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTE 331

Query: 537 TGQVFSMGSADYGQLGSPG-STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
            G+V S G   +GQLGS      K PT IE  +  + I  IA G    A ++   E++ W
Sbjct: 332 EGKVLSWGHGGHGQLGSSSLRNQKVPTEIEA-LADKKIVFIASGGSSSAAITDGGELWMW 390

Query: 596 GKGANGQLG-HGDNENKQTPTLVEALRDK------QVKSVVCGSNFTAAICL 640
           G   + QLG  G  E + TP  V  L ++      +V S+  G++   A+CL
Sbjct: 391 GNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASH--ALCL 440



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 138/489 (28%), Positives = 215/489 (43%), Gaps = 63/489 (12%)

Query: 119 ALISEDNRCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPI---LVAYEN 175
           A +S   R  +R  S +  + RS    N+   +   S D+      D+ P+   L ++  
Sbjct: 2   AALSHRLRSFTRRFSSTRTTQRSGGGANTKVPILYTSPDI------DSDPVTLQLFSWGR 55

Query: 176 SPQNRLGKAFSEVLSF-TAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLS 234
               +LG    E+  + +  A    R++   +S +   + G  DA+S      SFRI +S
Sbjct: 56  GASGQLGGGIEEIRMYPSPVANLLFRSD---QSFSLAQTPGRIDADS-----SSFRIGIS 107

Query: 235 SAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTV 294
                   G  H      GD++IWG+G G  L  G  N V + +      L P   E ++
Sbjct: 108 C-------GLFHSGLTIDGDLWIWGKGDGGRLGFGQENSVFVPN------LNPLFEEHSI 154

Query: 295 VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA 354
               + IA G  H+V +T QG +F+WG G  G LGH V      P+ +D      I  +A
Sbjct: 155 ----RCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIA 210

Query: 355 CGEFHTCAVTLSGDLYTW----GDGIHNLGLLGQVSEISHW-IPRKVSGQMEGLQISSIC 409
               HT A+T SG+LY W    GDG   LG     +E     +P KV      + ++S+ 
Sbjct: 211 TSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT--VPVASVS 268

Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA 469
           CG + T A+T  G+L+ +G  +   LG GD      P  V +L+ ++    +CG +H+ A
Sbjct: 269 CGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLA 328

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHS 529
           + E              K+ +WG G  GQLG      + VP  ++   D     +A G S
Sbjct: 329 LTE------------EGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGS 376

Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNI--------KHRYIEDIACGSY 581
            + A+T  G+++  G+A   QLG PG      T +E N          H+ I  I+ G+ 
Sbjct: 377 SSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVI-SISIGAS 435

Query: 582 HIAVVSSKS 590
           H   + S+S
Sbjct: 436 HALCLVSRS 444


>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1049

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 159/319 (49%), Gaps = 20/319 (6%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + +ACG +H + + + G +++ G  S G+LGH    +   P+L+ AL+   I MV+CG  
Sbjct: 36  KEVACGGQHTLFLLQDGSVYTCGSNSCGQLGHDKAGNS--PELVGALDTQKITMVSCGRA 93

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLG-QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           H+ AV   G ++ WG G  + G LG + +E +  IPR +  ++    IS + CG  H  A
Sbjct: 94  HSVAVNEQGQVFVWGAG--DGGQLGLETAETAVRIPRLLK-KLCDHSISQVVCGNQHCIA 150

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           ++  G+LFT+G  + G LG G   ++ + P  V++L  +     + G  H  A+      
Sbjct: 151 LSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFAL-----S 205

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
            SG+       +F WG    GQLG  D + R VP  +K         ++CG   T ALT 
Sbjct: 206 LSGA-------VFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDEHTAALTK 258

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTW 595
           +G +F+ G    GQLG   S  +   R    +    +  I CG +H +A V S   VY +
Sbjct: 259 SGGLFTFGDGSRGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVYAF 318

Query: 596 GKGANGQLGHGDNENKQTP 614
           G  ++GQLG G   + ++P
Sbjct: 319 GCNSHGQLGTGILADLRSP 337



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 169/396 (42%), Gaps = 52/396 (13%)

Query: 317 IFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           +  WG    G+LG GVE + V  P++    +G  +  VACG  HT  +   G +YT G  
Sbjct: 1   MLCWGNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSN 60

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
                  GQ+         ++ G ++  +I+ + CG  H+ A+   G++F +G G  G L
Sbjct: 61  S-----CGQLGHDKAGNSPELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQL 115

Query: 436 G-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG 494
           G     ++  +PR ++ L +       CG  H  A+                +LFTWG  
Sbjct: 116 GLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALSR------------DGQLFTWGQN 163

Query: 495 AEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS 553
           + GQLG G  E  ++ P  VK    I   ++  G     AL+ +G VF  G    GQLG 
Sbjct: 164 SSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGL 223

Query: 554 PGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                +  P  I+  ++ + +  I+CG  H A ++    ++T+G G+ GQLGHG + N+ 
Sbjct: 224 NDKQDRAVPCHIKF-LRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSSNNEL 282

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNCG 672
            P  V  L   +V  + CG + T A     G                             
Sbjct: 283 LPRRVMELMGTEVSQITCGRHHTLAFVPSSGT---------------------------- 314

Query: 673 LVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLN 708
            VY   C+S   + T +  ++  P+ V +D F+ LN
Sbjct: 315 -VYAFGCNSHGQLGTGILADLRSPHPVKND-FLTLN 348



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 126/251 (50%), Gaps = 24/251 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF+WG G G  L      G+E +    R   +P++L+         + CG++H + ++
Sbjct: 102 GQVFVWGAGDGGQL------GLETAETAVR---IPRLLKKLCDHSISQVVCGNQHCIALS 152

Query: 313 KQGQIFSWGEGSGGKLGHGV-EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           + GQ+F+WG+ S G+LG G  E     P  + +L G  +  +  G  H  A++LSG ++ 
Sbjct: 153 RDGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFG 212

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   +  G LG   +    +P  +   +   ++  I CG  HTAA+T +G LFTFGDG+
Sbjct: 213 WGK--NKAGQLGLNDKQDRAVPCHIKF-LRSQRVVYISCGDEHTAALTKSGGLFTFGDGS 269

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGHG  ++  +PR V  L   +    +CG  HT A V            SS  ++ +
Sbjct: 270 RGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVP-----------SSGTVYAF 318

Query: 492 GDGAEGQLGHG 502
           G  + GQLG G
Sbjct: 319 GCNSHGQLGTG 329



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 97/205 (47%), Gaps = 25/205 (12%)

Query: 253 GDVFIWGE------GLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSK 306
           G +F WG+      GLG G                   L P  ++S   +    I  G  
Sbjct: 155 GQLFTWGQNSSGQLGLGKG---------------ETSKLSPSPVKSLAGIPLAQITAGGD 199

Query: 307 HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
           H   ++  G +F WG+   G+LG   + D + P  I  L    +  ++CG+ HT A+T S
Sbjct: 200 HCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDEHTAALTKS 259

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLF 425
           G L+T+GDG  + G LG  S  +  +PR+V  ++ G ++S I CG  HT A + S+G ++
Sbjct: 260 GGLFTFGDG--SRGQLGHGSSNNELLPRRVM-ELMGTEVSQITCGRHHTLAFVPSSGTVY 316

Query: 426 TFGDGTFGALGHGDRSSTSVPREVE 450
            FG  + G LG G  +    P  V+
Sbjct: 317 AFGCNSHGQLGTGILADLRSPHPVK 341


>gi|301115610|ref|XP_002905534.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262110323|gb|EEY68375.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 456

 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 197/399 (49%), Gaps = 42/399 (10%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADR--RDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           V+ WG    NG LG   +G  I S  R   + L PK+ E+        +  G+ H+  + 
Sbjct: 71  VYTWG----NGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASHSAAID 126

Query: 313 KQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           ++G+++ WG     KLG G  +++ + P+ ++AL G  I  V+CG++ T AV   G +Y+
Sbjct: 127 EEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVSCGDYFTAAVDEDGKMYS 186

Query: 372 WGDG---IHNLGLLGQVSEISHWIPRKVSGQM-EGLQISSICCGPWHTAAITSAGKLFTF 427
           WG G   +   G LG         PR ++  + +G+ I+++ CG +HT A+T  G+++ +
Sbjct: 187 WGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTVALTKDGEIWAW 246

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK- 486
           G+G +G LG+G+  +  VP  +E   +               +V +A     S  L+ K 
Sbjct: 247 GNGEYGRLGNGESDTCEVPEPIEFFSKDN-------------VVSIAAGRDFSFALTDKG 293

Query: 487 KLFTWGDGAEGQLGHGDA------EPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
           +L++WG  ++ QLG G            +P+ V+  + +   ++A G+    A+T  G++
Sbjct: 294 ELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAAVTEDGRL 353

Query: 541 FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
           +  G+  + +          P  +    +H+  + +ACG  +   ++   +V+T+GKG++
Sbjct: 354 YMWGAKIWIE----------PHEMTAVNEHKMTQ-VACGRQYTVGLTDDGKVFTFGKGSS 402

Query: 601 GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
             LGHGD +N+  P  ++AL    + SV CG     AI 
Sbjct: 403 NCLGHGDRKNQLQPVKIQALAGVNITSVSCGDYHMGAIA 441



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 109/229 (47%), Gaps = 40/229 (17%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           G+++ WG G    LGNG              +     +P+ +E     +  SIA G   +
Sbjct: 241 GEIWAWGNGEYGRLGNG--------------ESDTCEVPEPIEFFSKDNVVSIAAGRDFS 286

Query: 309 VLVTKQGQIFSWGEGSGGKLG--HGVEADV----SYPKLIDALNGSNIHMVACGEFHTCA 362
             +T +G+++SWG  S  +LG   G+  DV    S P L++A NG  +  +A G  H  A
Sbjct: 287 FALTDKGELYSWGGNSQNQLGIGGGLAMDVYNIESIPVLVEAFNGLLVKQIAAGYDHAAA 346

Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWI-PRKVSGQMEGLQISSICCGPWHTAAITSA 421
           VT  G LY WG  I              WI P +++   E  +++ + CG  +T  +T  
Sbjct: 347 VTEDGRLYMWGAKI--------------WIEPHEMTAVNE-HKMTQVACGRQYTVGLTDD 391

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
           GK+FTFG G+   LGHGDR +   P +++ L  +     SCG +H  AI
Sbjct: 392 GKVFTFGKGSSNCLGHGDRKNQLQPVKIQALAGVNITSVSCGDYHMGAI 440



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 50/251 (19%)

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSV--------PREVETLKELKTVMASCGVWH 466
           TA+  +   ++T+G+GT G LGHG    + +        P+  E L+         G  H
Sbjct: 62  TASYATQSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASH 121

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVPLCVKVSDDISFCKVA 525
           +AAI E              KL+ WG     +LG G+ +E   +P  V+    I    V+
Sbjct: 122 SAAIDE------------EGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVS 169

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGK------------------FPTRIEGN 567
           CG   T A+   G+++S G          GST K                    T ++  
Sbjct: 170 CGDYFTAAVDEDGKMYSWGWG--------GSTMKGAGGLGHAGGKDEPTPRLLTTLVDQG 221

Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKS 627
           +    I  + CG +H   ++   E++ WG G  G+LG+G+++  + P  +E      V S
Sbjct: 222 VP---IATVECGEFHTVALTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVS 278

Query: 628 VVCGSNFTAAI 638
           +  G +F+ A+
Sbjct: 279 IAAGRDFSFAL 289


>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
 gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
          Length = 1053

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 153/321 (47%), Gaps = 20/321 (6%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           +ACG +H + +T  G++++ G     +LGH  E     P  I  L    I  +ACG  H+
Sbjct: 41  VACGHRHTLFLTASGKVYACGSNDYSQLGH--ELPTKRPLQIPELEDYVITQIACGSRHS 98

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T  G + +WGD  +  G LG  S+       K+   +    +  I CG  H+ A+T 
Sbjct: 99  MALTEWGQVLSWGD--NECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTC 156

Query: 421 AGKLFTFGDGTFGALG---HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
            G+L+++G   +G LG     + S  + P  + TL  +     +CG  HT  I +     
Sbjct: 157 CGELYSWGSNIYGQLGVKSPSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLISK----- 211

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
                  S  +F WG    GQLG  D   R  P  +K    +    VACG   ++ LT  
Sbjct: 212 -------SSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNE 264

Query: 538 GQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWG 596
           G VF+ G+  YGQLG   S+ +   R+   +    I  +ACG+ H +A+V S+  +Y +G
Sbjct: 265 GGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFG 324

Query: 597 KGANGQLGHGDNENKQTPTLV 617
            G++GQLG  + ++   P +V
Sbjct: 325 LGSSGQLGTRNTKSLNLPQVV 345



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 159/338 (47%), Gaps = 31/338 (9%)

Query: 316 QIFSWGEGSGGKLGHGVEAD--VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           +++ WG  S G+LG G   D  +  P  I     S ++ VACG  HT  +T SG +Y  G
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACG 61

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ---ISSICCGPWHTAAITSAGKLFTFGDG 430
              +        S++ H +P K   Q+  L+   I+ I CG  H+ A+T  G++ ++GD 
Sbjct: 62  SNDY--------SQLGHELPTKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDN 113

Query: 431 TFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
             G LGH  D+    +P+ V  L     V  +CG  H+ A+                +L+
Sbjct: 114 ECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALT------------CCGELY 161

Query: 490 TWGDGAEGQLG---HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           +WG    GQLG     +      P+ +     I    +ACG + T  ++ +  VF  G  
Sbjct: 162 SWGSNIYGQLGVKSPSELSQCNYPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFGWGRN 221

Query: 547 DYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           + GQLG    T + +PT+++  ++   +  +ACG      ++++  V+T G GA GQLGH
Sbjct: 222 NCGQLGLNDETNRAYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 280

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
           G + N+  P +V  L    +  V CG+  T A+   +G
Sbjct: 281 GFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRG 318



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 138/282 (48%), Gaps = 21/282 (7%)

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           +LY WG+  H    LG + +     P ++  + +   ++ + CG  HT  +T++GK++  
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSQIPWKPDS-AVNQVACGHRHTLFLTASGKVYAC 60

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           G   +  LGH     T  P ++  L++      +CG  H+ A+ E              +
Sbjct: 61  GSNDYSQLGH--ELPTKRPLQIPELEDYVITQIACGSRHSMALTEWG------------Q 106

Query: 488 LFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           + +WGD   GQLGH  D +   +P  V+     +  ++ACG++ ++ALT  G+++S GS 
Sbjct: 107 VLSWGDNECGQLGHASDQDVIQLPKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSN 166

Query: 547 DYGQLG--SPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
            YGQLG  SP    +  +P R+   +       IACG  H  ++S  S V+ WG+   GQ
Sbjct: 167 IYGQLGVKSPSELSQCNYPMRLT-TLLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQ 225

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           LG  D  N+  PT ++ LR   V+ V CG  F+  +    GV
Sbjct: 226 LGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 267



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 101/198 (51%), Gaps = 11/198 (5%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+++ WG  +   L  G  +  E+S  +      P  L + + + A +IACG  H  L++
Sbjct: 158 GELYSWGSNIYGQL--GVKSPSELSQCNY-----PMRLTTLLGIPAAAIACGGNHTFLIS 210

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K   +F WG  + G+LG   E + +YP  +  L    +  VACG+  +  +T  G ++T 
Sbjct: 211 KSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTC 270

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGT 431
           G G +  G LG     +  +PR V  ++ G  IS + CG  HT A+  S G+++ FG G+
Sbjct: 271 GAGAY--GQLGHGFSSNEMLPRMVM-ELMGSTISQVACGNRHTLALVPSRGRIYGFGLGS 327

Query: 432 FGALGHGDRSSTSVPREV 449
            G LG  +  S ++P+ V
Sbjct: 328 SGQLGTRNTKSLNLPQVV 345



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 26/160 (16%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           VF WG            N  ++   D  +   P  L++   L  + +ACG + +V +T +
Sbjct: 215 VFGWGRN----------NCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNE 264

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS-GDLYTWG 373
           G +F+ G G+ G+LGHG  ++   P+++  L GS I  VACG  HT A+  S G +Y +G
Sbjct: 265 GGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFG 324

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
                LG  GQ+           +   + L +  +  GPW
Sbjct: 325 -----LGSSGQLG----------TRNTKSLNLPQVVIGPW 349


>gi|428170458|gb|EKX39383.1| hypothetical protein GUITHDRAFT_89130 [Guillardia theta CCMP2712]
          Length = 396

 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 178/344 (51%), Gaps = 31/344 (9%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS--YPKLIDALNGSNIHMV 353
           ++ +S+ACG KH +L+++ G+++SWG     + GHGVE D+S   P+ I AL    +  +
Sbjct: 38  VEVKSLACGGKHNLLLSRAGKVYSWGYNDSRQTGHGVE-DLSDWEPRWIRALETVKVVQI 96

Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
           A GE H+ A+T   +++TWG G+H     G VS++  W P  V G ++G  I SI CG  
Sbjct: 97  AAGEDHSVALTDRSEVFTWGRGLHGQLGHGDVSDV--WFPFLVKG-LQGKGIKSIGCGYE 153

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGD-----RSSTSVPREVETLKELKTVMASCGVWHTA 468
           +T AIT  GK+  FG    G LG+GD       +  +P ++++L +              
Sbjct: 154 NTFAITGTGKVLGFGSAASGKLGNGDVDGGIGGNVYLPVQLKSLAKF------------- 200

Query: 469 AIVEVAGKTSGSNGLS-SKKLFTWGDGAEGQLG--HGDAEPRVVPL---CVKVSDDISFC 522
            I++  G  + S  LS + +L++ G  A GQLG    + E   +P      +VS    F 
Sbjct: 201 TIIQATGGKNFSMFLSHTGQLYSVGYAANGQLGIPFEEVESLNLPYTGTMQEVSHKGVFV 260

Query: 523 K-VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
           K V+CG S ++AL+  G V+S GS     LG  G+   F  ++   ++      ++ G Y
Sbjct: 261 KYVSCGDSHSLALSEDGIVYSWGSGINWALGHGGTEDTFTPKMVAMLEADPCVSVSAGGY 320

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQV 625
           H A VS+   +YTWG+   GQLG G N +  +   V+ L  + +
Sbjct: 321 HSAAVSATGRIYTWGRNFVGQLGTGQNIDDHSADHVQRLPTRVI 364



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 161/334 (48%), Gaps = 26/334 (7%)

Query: 317 IFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++S G G+GG+LG   E A  ++   +  L    +  +ACG  H   ++ +G +Y+WG  
Sbjct: 6   VYSCGHGAGGRLGLNDERARTAFTGPLGTLQDVEVKSLACGGKHNLLLSRAGKVYSWGYN 65

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
                  G V ++S W PR +   +E +++  I  G  H+ A+T   ++FT+G G  G L
Sbjct: 66  DSRQTGHG-VEDLSDWEPRWIR-ALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQL 123

Query: 436 GHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGA 495
           GHGD S    P  V+ L+        CG  +T AI              + K+  +G  A
Sbjct: 124 GHGDVSDVWFPFLVKGLQGKGIKSIGCGYENTFAIT------------GTGKVLGFGSAA 171

Query: 496 EGQLGHGDAEPRV-----VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
            G+LG+GD +  +     +P+ +K     +  +   G + ++ L+ TGQ++S+G A  GQ
Sbjct: 172 SGKLGNGDVDGGIGGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQ 231

Query: 551 LGSPGS---TGKFP---TRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
           LG P     +   P   T  E + K  +++ ++CG  H   +S    VY+WG G N  LG
Sbjct: 232 LGIPFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALG 291

Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           HG  E+  TP +V  L      SV  G   +AA+
Sbjct: 292 HGGTEDTFTPKMVAMLEADPCVSVSAGGYHSAAV 325



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 137/308 (44%), Gaps = 56/308 (18%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+ + +   +    IA G  H+V +T + ++F+WG G  G+LGHG  +DV +P L+  L 
Sbjct: 82  PRWIRALETVKVVQIAAGEDHSVALTDRSEVFTWGRGLHGQLGHGDVSDVWFPFLVKGLQ 141

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTW--------GDGIHNLGLLGQVSEISHWIPRKVSG 398
           G  I  + CG  +T A+T +G +  +        G+G  + G+ G V     ++P ++  
Sbjct: 142 GKGIKSIGCGYENTFAITGTGKVLGFGSAASGKLGNGDVDGGIGGNV-----YLPVQLK- 195

Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVP-REVETL----- 452
            +    I     G   +  ++  G+L++ G    G LG        +P  EVE+L     
Sbjct: 196 SLAKFTIIQATGGKNFSMFLSHTGQLYSVGYAANGQLG--------IPFEEVESLNLPYT 247

Query: 453 --------KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA 504
                   K +     SCG  H+ A+ E        +G+    +++WG G    LGHG  
Sbjct: 248 GTMQEVSHKGVFVKYVSCGDSHSLALSE--------DGI----VYSWGSGINWALGHGGT 295

Query: 505 EPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG--------SPGS 556
           E    P  V + +      V+ G   + A++ATG++++ G    GQLG        S   
Sbjct: 296 EDTFTPKMVAMLEADPCVSVSAGGYHSAAVSATGRIYTWGRNFVGQLGTGQNIDDHSADH 355

Query: 557 TGKFPTRI 564
             + PTR+
Sbjct: 356 VQRLPTRV 363



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 50/267 (18%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG GL +G LG           D  D   P +++       +SI CG ++   +T 
Sbjct: 111 EVFTWGRGL-HGQLG---------HGDVSDVWFPFLVKGLQGKGIKSIGCGYENTFAITG 160

Query: 314 QGQIFSWGEGSGGKLGH-----GVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
            G++  +G  + GKLG+     G+  +V  P  + +L    I     G+  +  ++ +G 
Sbjct: 161 TGKVLGFGSAASGKLGNGDVDGGIGGNVYLPVQLKSLAKFTIIQATGGKNFSMFLSHTGQ 220

Query: 369 LYTWGDGIH-------------NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
           LY+ G   +             NL   G + E+SH          +G+ +  + CG  H+
Sbjct: 221 LYSVGYAANGQLGIPFEEVESLNLPYTGTMQEVSH----------KGVFVKYVSCGDSHS 270

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            A++  G ++++G G   ALGHG    T  P+ V  L+    V  S G +H+AA+     
Sbjct: 271 LALSEDGIVYSWGSGINWALGHGGTEDTFTPKMVAMLEADPCVSVSAGGYHSAAVS---- 326

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHG 502
                   ++ +++TWG    GQLG G
Sbjct: 327 --------ATGRIYTWGRNFVGQLGTG 345


>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 816

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 143/295 (48%), Gaps = 21/295 (7%)

Query: 291 ESTVVLDAQSIACGS----KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           E T + D + I   +    KH + +TK  +++SWG G GG+LGHG  +    P LI AL 
Sbjct: 506 EMTALDDKEVIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALK 565

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
           G +I  V CG  ++ A++ +G LYTWG G  N G LG  +      P  +S  +    I 
Sbjct: 566 GKDIIDVECGGTYSAAISANGALYTWGRG--NYGRLGHGTAEDCLTPTMISA-LSDEHII 622

Query: 407 SICCGPW--HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
            + CG +  HT  ITS GK++++GDG +G LG G    + +PR +E L+ +K V   CG 
Sbjct: 623 KVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGA 682

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
             + A+ E               ++TWG G   +LGH   E    P  V+V  D     V
Sbjct: 683 QFSVALSE------------DGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGV 730

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
           + G S  +ALT  G+V+  G  +  Q+           R+   +K + +  + CG
Sbjct: 731 SLGVSHVLALTDQGEVYGWGKNENKQICDSSELFVQQPRLIEALKGQKVVGVCCG 785



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 124/228 (54%), Gaps = 16/228 (7%)

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           H  A+T   +++++G+G  G LGHGD S+   P  ++ LK    +   CG  ++AAI   
Sbjct: 526 HYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAI--- 582

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSIT 531
                 +NG     L+TWG G  G+LGHG AE  + P  +    D    KVACG  ++ T
Sbjct: 583 -----SANG----ALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHT 633

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           + +T+ G+V+S G  DYG+LG  GS G K P  IE  +++  I  + CG+     +S   
Sbjct: 634 LCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIE-KLQNVKIVQVYCGAQFSVALSEDG 692

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            VYTWGKG   +LGH   EN + P +VE LRD++V  V  G +   A+
Sbjct: 693 HVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLAL 740



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 168/350 (48%), Gaps = 31/350 (8%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+  ++   L  + I C  +  +++T+ G++F     S          D   P+ + AL+
Sbjct: 462 PQNCDTLSELTIKQICCSDRTILILTQTGKVFFMYYSS----------DTQCPQEMTALD 511

Query: 347 GSNIHMVACGEF--HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
              +  +A      H  A+T   ++Y+WG+G  + G LG     +   P  +   ++G  
Sbjct: 512 DKEVIKIAAHPEGKHYLALTKDYEVYSWGNG--DGGRLGHGDTSTKEEPTLIQA-LKGKD 568

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           I  + CG  ++AAI++ G L+T+G G +G LGHG       P  +  L +   +  +CG 
Sbjct: 569 IIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGS 628

Query: 465 W--HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
           +  HT  I             S  K+++WGDG  G+LG G ++   +P  ++   ++   
Sbjct: 629 FYAHTLCIT------------SQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIV 676

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSY 581
           +V CG   ++AL+  G V++ G  +  +LG P     +FP  +E  ++ R +  ++ G  
Sbjct: 677 QVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVE-VLRDRKVVGVSLGVS 735

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
           H+  ++ + EVY WGK  N Q+        Q P L+EAL+ ++V  V CG
Sbjct: 736 HVLALTDQGEVYGWGKNENKQICDSSELFVQQPRLIEALKGQKVVGVCCG 785



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 115/221 (52%), Gaps = 15/221 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V+ WG G G  L  G        ++ + +  L + L+   ++D   + CG  ++  ++ 
Sbjct: 535 EVYSWGNGDGGRLGHG-------DTSTKEEPTLIQALKGKDIID---VECGGTYSAAISA 584

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF--HTCAVTLSGDLYT 371
            G +++WG G+ G+LGHG   D   P +I AL+  +I  VACG F  HT  +T  G +Y+
Sbjct: 585 NGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYS 644

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WGDG  + G LG+       +PR +  +++ ++I  + CG   + A++  G ++T+G G 
Sbjct: 645 WGDG--DYGKLGRGGSDGSKLPRLIE-KLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGE 701

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
              LGH    +   P  VE L++ K V  S GV H  A+ +
Sbjct: 702 GWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTD 742



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 68/110 (61%), Gaps = 2/110 (1%)

Query: 532 IALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           +ALT   +V+S G+ D G+LG    ST + PT I+  +K + I D+ CG  + A +S+  
Sbjct: 528 LALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQA-LKGKDIIDVECGGTYSAAISANG 586

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            +YTWG+G  G+LGHG  E+  TPT++ AL D+ +  V CGS +   +C+
Sbjct: 587 ALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLCI 636



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 87/167 (52%), Gaps = 13/167 (7%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+G    L  G  +G +          LP+++E    +    + CG++ +V ++
Sbjct: 640 GKVYSWGDGDYGKLGRGGSDGSK----------LPRLIEKLQNVKIVQVYCGAQFSVALS 689

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           + G +++WG+G G KLGH  E +V +P++++ L    +  V+ G  H  A+T  G++Y W
Sbjct: 690 EDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEVYGW 749

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           G   +    +   SE+    PR +   ++G ++  +CCGP  + A T
Sbjct: 750 GKNENK--QICDSSELFVQQPRLIEA-LKGQKVVGVCCGPAQSFAWT 793


>gi|440800739|gb|ELR21774.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 292

 Score =  144 bits (363), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 107/325 (32%), Positives = 158/325 (48%), Gaps = 43/325 (13%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           +FSWG G+GG+LGH  E + S+P+ + AL      ++A G   +                
Sbjct: 2   VFSWGLGNGGQLGHHDEENGSFPREVSALRKKPSVIIAVGNGES---------------- 45

Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
              G LG  +E    IP++++ +    ++  + CG  H+A  T A  + T+G+GT G LG
Sbjct: 46  ---GRLGLGNENCCNIPKRINIKK---KVVGVSCGDEHSAVFTEANTVLTWGNGTGGRLG 99

Query: 437 HGDRSSTSVPREVETLKELKTVMASCGV-WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGA 495
            GD  S + P     L E K    SCG  W   A++ +AGK           +FT+G G+
Sbjct: 100 TGDEISRTQP----VLPEHKVAQISCGSDW--TAVLTLAGK-----------VFTFGVGS 142

Query: 496 EGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG 555
            G+LGHG+   ++VP  V+  D      ++CG     AL   G VF+ G    G+LG   
Sbjct: 143 YGKLGHGNDSNQLVPKLVEELDTERVVSLSCGADHMAALNIEGDVFTWGCGGNGRLGHGS 202

Query: 556 S-TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN-ENKQT 613
               K P  ++G +       + CG YH+ V +   E+Y WG    GQ G G + EN+ T
Sbjct: 203 ERDSKKPVLVKG-MNGLVALTVECGGYHMGVTTLDGELYMWGWNVYGQCGLGLHVENQLT 261

Query: 614 PTLVEALRDKQVKSVVCGSNFTAAI 638
           P LVE LR K+V  V CG + T A+
Sbjct: 262 PVLVEQLRGKRVLMVACGESHTMAL 286



 Score =  115 bits (287), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 78/280 (27%), Positives = 127/280 (45%), Gaps = 45/280 (16%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +++WG G  N G LG   E +   PR+VS   +   +                  +   G
Sbjct: 2   VFSWGLG--NGGQLGHHDEENGSFPREVSALRKKPSV------------------IIAVG 41

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           +G  G LG G+ +  ++P+ +   K  K V  SCG  H+A   E            +  +
Sbjct: 42  NGESGRLGLGNENCCNIPKRINIKK--KVVGVSCGDEHSAVFTE------------ANTV 87

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            TWG+G  G+LG GD   R  P    V  +    +++CG   T  LT  G+VF+ G   Y
Sbjct: 88  LTWGNGTGGRLGTGDEISRTQP----VLPEHKVAQISCGSDWTAVLTLAGKVFTFGVGSY 143

Query: 549 GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           G+LG    + +   ++   +    +  ++CG+ H+A ++ + +V+TWG G NG+LGHG  
Sbjct: 144 GKLGHGNDSNQLVPKLVEELDTERVVSLSCGADHMAALNIEGDVFTWGCGGNGRLGHGSE 203

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIAD 648
            + + P LV+ +      +V CG         H GV+  D
Sbjct: 204 RDSKKPVLVKGMNGLVALTVECGG-------YHMGVTTLD 236



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 16/184 (8%)

Query: 241 SQGSCHEDFDGL----GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +Q SC  D+  +    G VF +G G   G LG           +  + L+PK++E     
Sbjct: 117 AQISCGSDWTAVLTLAGKVFTFGVG-SYGKLG---------HGNDSNQLVPKLVEELDTE 166

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG 356
              S++CG+ H   +  +G +F+WG G  G+LGHG E D   P L+  +NG     V CG
Sbjct: 167 RVVSLSCGADHMAALNIEGDVFTWGCGGNGRLGHGSERDSKKPVLVKGMNGLVALTVECG 226

Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            +H    TL G+LY WG  ++  G  G    + + +   +  Q+ G ++  + CG  HT 
Sbjct: 227 GYHMGVTTLDGELYMWGWNVY--GQCGLGLHVENQLTPVLVEQLRGKRVLMVACGESHTM 284

Query: 417 AITS 420
           A+ S
Sbjct: 285 ALVS 288


>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 419

 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 162/337 (48%), Gaps = 27/337 (8%)

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM--VA 354
           D  +++CGS+H + +T  G ++SWG GS G+LGHG    ++ P+ I       + +  ++
Sbjct: 50  DIVAVSCGSRHTMALTSSGAVYSWGWGSMGQLGHGDLKIINEPQKIAFFEQERLEVDYIS 109

Query: 355 CGEFHTCAVTLSGDLYTWGDG-IHNLGLLGQVSEISHWIPRK--VSGQMEGLQISSICCG 411
           CG  H+ AVT  G LY WG+     LGL  +       +P K  +     G  I  + CG
Sbjct: 110 CGGCHSAAVTKDGTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCG 169

Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHG-----DRSSTSV-----PREVETLKELKTVMAS 461
             HTAA+TS G+++ +G G  G LG G     D  + S+     P  ++     K V  +
Sbjct: 170 GTHTAALTSFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVA 229

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
           CG +H+AA+ E               ++ WG    G LG G +  + +P  ++  DDI  
Sbjct: 230 CGAFHSAAVTE------------QGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPV 277

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
            +V+CG   T+ +  +G  ++ G  +YG+LG   +  +    +   +K + +   ACG  
Sbjct: 278 LRVSCGGWHTVVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGS 337

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
           H   V+S    Y  G+  +G+LG  D +    PT ++
Sbjct: 338 HTLFVTSDGTAYVAGRPDHGRLGLADMKALGVPTRLD 374



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 157/330 (47%), Gaps = 59/330 (17%)

Query: 337 SYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV 396
           ++P+ I  L   +I  V+CG  HT A+T SG +Y+WG G  ++G LG         P+K+
Sbjct: 38  NFPQQIGNLPDEDIVAVSCGSRHTMALTSSGAVYSWGWG--SMGQLGHGDLKIINEPQKI 95

Query: 397 SG-QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
           +  + E L++  I CG  H+AA+T  G L+ +G+  +G LG        +P+E E   E 
Sbjct: 96  AFFEQERLEVDYISCGGCHSAAVTKDGTLYVWGESHWGQLG--------LPKEYEAAHES 147

Query: 456 --------------KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH 501
                           V  SCG  HTAA+             S  +++ WG G  GQLG 
Sbjct: 148 LPVKCPMPEGEAGETIVKVSCGGTHTAALT------------SFGRVYVWGRGDSGQLGI 195

Query: 502 G-----DAEPRVV-----PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           G     D E   +     P  +K  +     +VACG   + A+T  G V+  G  DYG L
Sbjct: 196 GSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVTEQGHVYVWGKEDYGML 255

Query: 552 G-SPGSTGKFPTRIEGNIKHRYIEDI-----ACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           G    S  + P R+E      Y +DI     +CG +H  VV+   + Y +G+G  G+LG 
Sbjct: 256 GVGQSSDQQIPKRLE------YFDDIPVLRVSCGGWHTVVVAKSGDCYAFGRGEYGRLGL 309

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           GD +++  P LV+AL+ K V    CG + T
Sbjct: 310 GDTKSRTRPHLVKALKGKTVIQAACGGSHT 339



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 126/265 (47%), Gaps = 31/265 (11%)

Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
            P+++ G +    I ++ CG  HT A+TS+G ++++G G+ G LGHGD    + P+++  
Sbjct: 39  FPQQI-GNLPDEDIVAVSCGSRHTMALTSSGAVYSWGWGSMGQLGHGDLKIINEPQKIAF 97

Query: 452 LKE--LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG---HGDAEP 506
            ++  L+    SCG  H+AA+ +               L+ WG+   GQLG     +A  
Sbjct: 98  FEQERLEVDYISCGGCHSAAVTK------------DGTLYVWGESHWGQLGLPKEYEAAH 145

Query: 507 RVVPLCVKVSDDI---SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFP-- 561
             +P+   + +     +  KV+CG + T ALT+ G+V+  G  D GQLG      K P  
Sbjct: 146 ESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVYVWGRGDSGQLGIGSVWMKDPEN 205

Query: 562 --------TRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQT 613
                     +        +  +ACG++H A V+ +  VY WGK   G LG G + ++Q 
Sbjct: 206 ESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQI 265

Query: 614 PTLVEALRDKQVKSVVCGSNFTAAI 638
           P  +E   D  V  V CG   T  +
Sbjct: 266 PKRLEYFDDIPVLRVSCGGWHTVVV 290



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 101/221 (45%), Gaps = 4/221 (1%)

Query: 252 LGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
            G V++WG G    L  G+V   +  +     A  P +L++        +ACG+ H+  V
Sbjct: 179 FGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAV 238

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           T+QG ++ WG+   G LG G  +D   PK ++  +   +  V+CG +HT  V  SGD Y 
Sbjct: 239 TEQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWHTVVVAKSGDCYA 298

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           +G G    G LG     S   P  V   ++G  +    CG  HT  +TS G  +  G   
Sbjct: 299 FGRG--EYGRLGLGDTKSRTRPHLVK-ALKGKTVIQAACGGSHTLFVTSDGTAYVAGRPD 355

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
            G LG  D  +  VP  ++ L  +     S G  H+ A++ 
Sbjct: 356 HGRLGLADMKALGVPTRLD-LGPIPVRQFSAGGAHSVALMH 395


>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1089

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 142/305 (46%), Gaps = 23/305 (7%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           + CG +H   +T  G +  +G G  G+LG G     S P+ +  L+G  +  +A G  H+
Sbjct: 49  VFCGYEHTFALTSDGDVLGFGNGVKGQLGIGNTDSHSNPQRVHLLSGKGVVKMAAGLEHS 108

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T SGDLY +GD +     LG         P+KV   +   +I+ + CG  HTA +TS
Sbjct: 109 LALTESGDLYAFGDNLSGQLGLGHNFTAKEQTPQKVP-PLGRAKITQLACGQDHTAVLTS 167

Query: 421 AGKLFTFG---DGTFGALGHGDRSS---TSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           +G+LF FG   DG  G  GH +       S P+ V  LK    V   CG+ HT A+    
Sbjct: 168 SGELFMFGNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAG 227

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP-LCVKVSDDISFCKVACGHSITIA 533
           G            ++ WG+   GQLG GD + R  P L  K         VACG   TIA
Sbjct: 228 G------------VYCWGENGRGQLGTGDTQNRYTPSLVCKPLSAFKCIHVACGGQHTIA 275

Query: 534 LTATGQVFSMGSADYGQ--LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
           +T    V+  GS  +GQ  LG  G     PTRI   +  R +++   G++H  + +   E
Sbjct: 276 VTDCDDVYGFGSDRHGQLGLGRRGVIVPVPTRIV-RLGGRRVKNCVGGAWHTIIGTVTGE 334

Query: 592 VYTWG 596
            Y  G
Sbjct: 335 QYIMG 339



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 144/317 (45%), Gaps = 45/317 (14%)

Query: 371 TWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGLQ-ISSICCGPWHTAAITSAGKLFTFG 428
            W  G ++ G LG  +   S ++P +V+ Q+   Q I+ + CG  HT A+TS G +  FG
Sbjct: 10  VWAVGGNSKGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLGFG 69

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           +G  G LG G+  S S P+ V  L     V  + G+ H+ A+ E            S  L
Sbjct: 70  NGVKGQLGIGNTDSHSNPQRVHLLSGKGVVKMAAGLEHSLALTE------------SGDL 117

Query: 489 FTWGDGAEGQLGHG------DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
           + +GD   GQLG G      +  P+ VP   +        ++ACG   T  LT++G++F 
Sbjct: 118 YAFGDNLSGQLGLGHNFTAKEQTPQKVPPLGRAK----ITQLACGQDHTAVLTSSGELFM 173

Query: 543 MGSADYGQLGSPGSTGKFPT------RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
            G+   G LG  G   + P       ++   +K +++  I CG  H   +++   VY WG
Sbjct: 174 FGNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWG 233

Query: 597 KGANGQLGHGDNENKQTPTLV-EALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGC 655
           +   GQLG GD +N+ TP+LV + L   +   V CG   T A+              + C
Sbjct: 234 ENGRGQLGTGDTQNRYTPSLVCKPLSAFKCIHVACGGQHTIAV--------------TDC 279

Query: 656 RNQFNFRRRRHNCYNCG 672
            + + F   RH     G
Sbjct: 280 DDVYGFGSDRHGQLGLG 296



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 152/329 (46%), Gaps = 28/329 (8%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA---CGEFHTCAVTLSGDLYTWG 373
           +++ G  S G+LG+G     S+     A   +    +A   CG  HT A+T  GD+  +G
Sbjct: 10  VWAVGGNSKGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVLGFG 69

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
           +G+   G LG  +  SH  P++V   + G  +  +  G  H+ A+T +G L+ FGD   G
Sbjct: 70  NGVK--GQLGIGNTDSHSNPQRVH-LLSGKGVVKMAAGLEHSLALTESGDLYAFGDNLSG 126

Query: 434 --ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
              LGH   +    P++V  L   K    +CG  HTA +             SS +LF +
Sbjct: 127 QLGLGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLT------------SSGELFMF 174

Query: 492 G---DGAEGQLGHGDAEPRVV---PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
           G   DGA G  GH +  P +V   P  V         ++ CG   T+ALTA G V+  G 
Sbjct: 175 GNNRDGALGVAGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWGE 234

Query: 546 ADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
              GQLG+  +  ++ P+ +   +       +ACG  H   V+   +VY +G   +GQLG
Sbjct: 235 NGRGQLGTGDTQNRYTPSLVCKPLSAFKCIHVACGGQHTIAVTDCDDVYGFGSDRHGQLG 294

Query: 605 HGDNEN-KQTPTLVEALRDKQVKSVVCGS 632
            G        PT +  L  ++VK+ V G+
Sbjct: 295 LGRRGVIVPVPTRIVRLGGRRVKNCVGGA 323


>gi|391347040|ref|XP_003747773.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Metaseiulus occidentalis]
          Length = 523

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 175/354 (49%), Gaps = 38/354 (10%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           S+ACG +H+V +T  G+ FS+G    G+LGHG    +  P+ + AL      +VACG  H
Sbjct: 46  SVACGDQHSVFITASGRTFSFGSNDYGQLGHGHTKALVNPRCVKALKDKRAILVACGRSH 105

Query: 360 TCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
           T   T    +Y +G +  H LG+  + S   H  P+ V+  + G+Q+ ++  G  H+ A+
Sbjct: 106 TLVATDDKKVYAFGINSEHQLGV--KSSAAYHADPQLVA-TLNGVQVKALTAGADHSLAL 162

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           ++ G ++ +G    G LG G +    +P +++T  E K +  S G +H+A +        
Sbjct: 163 SAKGIVYLWGSSEHGQLGLGRKKQRKLPVQLKT--EGKAIAISAGAYHSAYV-------- 212

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC-KVACGHSITIALTAT 537
            ++G+    L+T+G+   G+LG   A P+      KV D       VACG S T+ALT  
Sbjct: 213 NTDGV----LYTFGETEHGKLGTNLA-PKKCRKPSKVPDIQGLVTSVACGGSHTVALTCD 267

Query: 538 GQVFSMGSADYGQLGSPGSTG--------KFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
           G+ +S G    GQLG              + PT ++       +  ++ G  H A +S  
Sbjct: 268 GRAYSFGDGSQGQLGLGQRVTHAGRPHLIQMPTGVK-------MARVSAGQSHTAFLSEG 320

Query: 590 SEVYTWGKGANGQLGHGDNE---NKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            ++YT G+G +G+L   D E   NK +P LV+ L   QV+ V CG   T  + +
Sbjct: 321 RQMYTCGEGRHGKLALEDGEMGSNKFSPMLVDILSLFQVQQVSCGGCHTLVLVV 374



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 124/250 (49%), Gaps = 20/250 (8%)

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           + S+ CG  H+  IT++G+ F+FG   +G LGHG   +   PR V+ LK+ + ++ +CG 
Sbjct: 44  VISVACGDQHSVFITASGRTFSFGSNDYGQLGHGHTKALVNPRCVKALKDKRAILVACGR 103

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCK 523
            HT    +             KK++ +G  +E QLG    A     P  V   + +    
Sbjct: 104 SHTLVATD------------DKKVYAFGINSEHQLGVKSSAAYHADPQLVATLNGVQVKA 151

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
           +  G   ++AL+A G V+  GS+++GQLG       K P +++   K      I+ G+YH
Sbjct: 152 LTAGADHSLALSAKGIVYLWGSSEHGQLGLGRKKQRKLPVQLKTEGK---AIAISAGAYH 208

Query: 583 IAVVSSKSEVYTWGKGANGQLGHGDNENK-QTPTLVEALRDKQVKSVVCGSNFTAAI-CL 640
            A V++   +YT+G+  +G+LG      K + P+ V  ++   V SV CG + T A+ C 
Sbjct: 209 SAYVNTDGVLYTFGETEHGKLGTNLAPKKCRKPSKVPDIQG-LVTSVACGGSHTVALTCD 267

Query: 641 HKGVSIADHS 650
            +  S  D S
Sbjct: 268 GRAYSFGDGS 277



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 131/271 (48%), Gaps = 26/271 (9%)

Query: 273 GVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV 332
           GV+ S+A   D   P+++ +   +  +++  G+ H++ ++ +G ++ WG    G+LG G 
Sbjct: 127 GVKSSAAYHAD---PQLVATLNGVQVKALTAGADHSLALSAKGIVYLWGSSEHGQLGLGR 183

Query: 333 EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLG-QVSEISHW 391
           +     P  +    G  I  ++ G +H+  V   G LYT+G+  H  G LG  ++     
Sbjct: 184 KKQRKLPVQLKT-EGKAI-AISAGAYHSAYVNTDGVLYTFGETEH--GKLGTNLAPKKCR 239

Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVE 450
            P KV   ++GL ++S+ CG  HT A+T  G+ ++FGDG+ G LG G R +    P  ++
Sbjct: 240 KPSKVP-DIQGL-VTSVACGGSHTVALTCDGRAYSFGDGSQGQLGLGQRVTHAGRPHLIQ 297

Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP---R 507
               +K    S G  HTA + E             ++++T G+G  G+L   D E    +
Sbjct: 298 MPTGVKMARVSAGQSHTAFLSE------------GRQMYTCGEGRHGKLALEDGEMGSNK 345

Query: 508 VVPLCVKVSDDISFCKVACGHSITIALTATG 538
             P+ V +       +V+CG   T+ L   G
Sbjct: 346 FSPMLVDILSLFQVQQVSCGGCHTLVLVVPG 376



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 4/93 (4%)

Query: 547 DYGQLGSPGSTGK--FPTRIEGN--IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
           D  +LG+  + GK  F   + G   +K+  +  +ACG  H   +++    +++G    GQ
Sbjct: 14  DIPELGAVFTFGKSKFSDNLPGTFWVKNDAVISVACGDQHSVFITASGRTFSFGSNDYGQ 73

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           LGHG  +    P  V+AL+DK+   V CG + T
Sbjct: 74  LGHGHTKALVNPRCVKALKDKRAILVACGRSHT 106


>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
 gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
 gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
          Length = 1062

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 174/371 (46%), Gaps = 29/371 (7%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +++ WG    +G LG  + G+E         L P  +  T     Q +ACG +H + +T 
Sbjct: 6   ELYCWGST-SHGQLG--LGGIE-----DEQILTPSQIPWTPDTAVQQVACGHRHTLFLTA 57

Query: 314 QGQIFSWGEGSGGKLGHGVEAD---VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
            G++++ G     +LGH +      +S   LI  L    I  + CG  H+ A++  G + 
Sbjct: 58  TGKVYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVL 117

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WGD  ++ G LG  ++       KV  Q+    +  I CG  H+ A+TS G+L+++G  
Sbjct: 118 SWGD--NDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSWGSN 175

Query: 431 TFGALG---HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
            +G LG     D +  + P  + TL  +     +CG  H+  I +            S  
Sbjct: 176 IYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISK------------SGA 223

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           +F WG    GQLG  D   R  P  +K    +    VACG   ++ LT  G VF+ G+  
Sbjct: 224 VFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGA 283

Query: 548 YGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHG 606
           YGQLG   S+ +   R+   +    I  +ACG+ H +A+V S+  VY +G G++GQLG  
Sbjct: 284 YGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTR 343

Query: 607 DNENKQTPTLV 617
             ++   P +V
Sbjct: 344 STKSLMLPQVV 354



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 160/343 (46%), Gaps = 36/343 (10%)

Query: 316 QIFSWGEGSGGKLGHGVEAD--VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           +++ WG  S G+LG G   D  +  P  I     + +  VACG  HT  +T +G +Y  G
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACG 65

Query: 374 DGIHNLGLLGQVSEISHWIPRK--------VSGQMEGLQISSICCGPWHTAAITSAGKLF 425
              +        S++ H +P K        +  +++   I  ICCG  H+ A++  G++ 
Sbjct: 66  SNDY--------SQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVL 117

Query: 426 TFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           ++GD   G LGH  D+    +P+ V  L     V  +CG  H+ A+             S
Sbjct: 118 SWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALT------------S 165

Query: 485 SKKLFTWGDGAEGQLG---HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             +L++WG    GQLG     D      PL +     I    +ACG + +  ++ +G VF
Sbjct: 166 CGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVF 225

Query: 542 SMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
             G  + GQLG    T + +PT+++  ++   +  +ACG      ++++  V+T G GA 
Sbjct: 226 GWGRNNCGQLGLNDETNRSYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAY 284

Query: 601 GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
           GQLGHG + N+  P +V  L    +  V CG+  T A+   +G
Sbjct: 285 GQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRG 327



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 133/285 (46%), Gaps = 22/285 (7%)

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           +LY WG   H    LG + +     P ++    +   +  + CG  HT  +T+ GK++  
Sbjct: 6   ELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDT-AVQQVACGHRHTLFLTATGKVYAC 64

Query: 428 GDGTFGALGHG---DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           G   +  LGH     R   S    +  L++   +   CG  H+ A+ +            
Sbjct: 65  GSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWG---------- 114

Query: 485 SKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
             ++ +WGD   GQLGH  D E   +P  V+     +  ++ACG++ ++ALT+ G+++S 
Sbjct: 115 --QVLSWGDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSCGELYSW 172

Query: 544 GSADYGQLG--SPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
           GS  YGQLG  SP       +P R+   +    +  IACG  H  ++S    V+ WG+  
Sbjct: 173 GSNIYGQLGVNSPNDLTHCNYPLRLT-TLLGIPLAAIACGGNHSFLISKSGAVFGWGRNN 231

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            GQLG  D  N+  PT ++ LR   V+ V CG  F+  +    GV
Sbjct: 232 CGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 276



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/161 (37%), Positives = 86/161 (53%), Gaps = 6/161 (3%)

Query: 484 SSKKLFTWGDGAEGQLGHG--DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
           S K+L+ WG  + GQLG G  + E  + P  +  + D +  +VACGH  T+ LTATG+V+
Sbjct: 3   SGKELYCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVY 62

Query: 542 SMGSADYGQLGSPGSTGK---FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           + GS DY QLG    T +    P  +   ++   I  I CGS H   +S   +V +WG  
Sbjct: 63  ACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 122

Query: 599 ANGQLGHG-DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             GQLGH  D E  Q P +V  L  K V  + CG+N + A+
Sbjct: 123 DCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLAL 163



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 11/198 (5%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+++ WG  +  G LG  VN    S  D      P  L + + +   +IACG  H+ L++
Sbjct: 167 GELYSWGSNI-YGQLG--VN----SPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLIS 219

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K G +F WG  + G+LG   E + SYP  +  L    +  VACG+  +  +T  G ++T 
Sbjct: 220 KSGAVFGWGRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTC 279

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGT 431
           G G +  G LG     +  +PR V  ++ G  I+ + CG  HT A+  S G+++ FG G+
Sbjct: 280 GAGAY--GQLGHGFSSNEMLPRMVM-ELMGSTITQVACGNRHTLALVPSRGRVYAFGLGS 336

Query: 432 FGALGHGDRSSTSVPREV 449
            G LG     S  +P+ V
Sbjct: 337 SGQLGTRSTKSLMLPQVV 354



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 13/147 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG            N  ++   D  +   P  L++   L  + +ACG + +V +T
Sbjct: 222 GAVFGWGRN----------NCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLT 271

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS-GDLYT 371
            +G +F+ G G+ G+LGHG  ++   P+++  L GS I  VACG  HT A+  S G +Y 
Sbjct: 272 NEGGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYA 331

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSG 398
           +G G  + G LG  S  S  +P+ V G
Sbjct: 332 FGLG--SSGQLGTRSTKSLMLPQVVIG 356


>gi|328709531|ref|XP_003243987.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Acyrthosiphon pisum]
          Length = 505

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 111/344 (32%), Positives = 169/344 (49%), Gaps = 35/344 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+CG +H+ +V K G++F +G+ S G+LG G   +V  P  + +L    +  +ACG  HT
Sbjct: 39  ISCGEEHSGIVCKNGRVFCFGKNSFGQLGLGHTENVYKPNCVKSLKPDKVKHIACGRSHT 98

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQ-VSEISHW-IPRKVSGQMEGLQISSICCGPWHTAAI 418
              T +  +Y +GD  ++ G LGQ V++++H  +P +V+ +     I  +  G +HTAA+
Sbjct: 99  IVSTENNIVYGFGD--NSDGQLGQSVADVTHSDVPIEVT-RFNDKNIIQLSAGSYHTAAL 155

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGK 476
              G ++ +G  +   LG       SV   V T+    L  +  SCG  HTA +  +   
Sbjct: 156 LENGDVYVWGSNSDRQLGLNSMDDDSVNVSVPTIVPIALPVLYVSCGHTHTAFVTRIG-- 213

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
                      L+T GD   G+LGHG      V    K+       KV+CG + TIAL  
Sbjct: 214 ----------DLYTCGDREYGKLGHGLWSLSRVDTTEKI------VKVSCGANHTIALND 257

Query: 537 TGQVFSMGSADYGQLGSPGSTGK---FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
            G+VF  G+ D GQ+G    T +   +P      I +  I  I CG  H A +++  +++
Sbjct: 258 AGKVFVCGNNDCGQIGLRNVTSQGHLYPCP----ITNEPIVQIVCGQSHSAFITASGKLF 313

Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDK--QVKSVVCGSNFT 635
             G G  G+LG   N+   TPTLV A  DK   V+ V CG N T
Sbjct: 314 MCGDGKYGKLGIDVNQ-ITTPTLVLAFVDKNLNVQMVSCGGNHT 356



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 168/355 (47%), Gaps = 49/355 (13%)

Query: 244 SCHEDFDGL----GDVFIWGEG-LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDA 298
           SC E+  G+    G VF +G+   G   LG   N              P  ++S      
Sbjct: 40  SCGEEHSGIVCKNGRVFCFGKNSFGQLGLGHTEN-----------VYKPNCVKSLKPDKV 88

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY---PKLIDALNGSNIHMVAC 355
           + IACG  H ++ T+   ++ +G+ S G+LG  V ADV++   P  +   N  NI  ++ 
Sbjct: 89  KHIACGRSHTIVSTENNIVYGFGDNSDGQLGQSV-ADVTHSDVPIEVTRFNDKNIIQLSA 147

Query: 356 GEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSE-ISHWIPRKVSGQMEGLQISSICCGPW 413
           G +HT A+  +GD+Y WG +    LGL     + ++  +P  V   +  L +S   CG  
Sbjct: 148 GSYHTAALLENGDVYVWGSNSDRQLGLNSMDDDSVNVSVPTIVPIALPVLYVS---CGHT 204

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           HTA +T  G L+T GD  +G LGHG  S +     V+T +  K V  SCG  HT A+ + 
Sbjct: 205 HTAFVTRIGDLYTCGDREYGKLGHGLWSLS----RVDTTE--KIVKVSCGANHTIALNDA 258

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLG--HGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
                        K+F  G+   GQ+G  +  ++  + P C   ++ I   ++ CG S +
Sbjct: 259 G------------KVFVCGNNDCGQIGLRNVTSQGHLYP-CPITNEPI--VQIVCGQSHS 303

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNI-KHRYIEDIACGSYHIAV 585
             +TA+G++F  G   YG+LG   +    PT +   + K+  ++ ++CG  H  +
Sbjct: 304 AFITASGKLFMCGDGKYGKLGIDVNQITTPTLVLAFVDKNLNVQMVSCGGNHTLI 358



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 108/239 (45%), Gaps = 25/239 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           GDV++WG      L      G+     D  +  +P ++   + L    ++CG  H   VT
Sbjct: 159 GDVYVWGSNSDRQL------GLNSMDDDSVNVSVPTIVP--IALPVLYVSCGHTHTAFVT 210

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           + G +++ G+   GKLGHG+ +      L        I  V+CG  HT A+  +G ++  
Sbjct: 211 RIGDLYTCGDREYGKLGHGLWS------LSRVDTTEKIVKVSCGANHTIALNDAGKVFVC 264

Query: 373 GDGIHNLGLLG--QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           G+  ++ G +G   V+   H  P  ++ +     I  I CG  H+A IT++GKLF  GDG
Sbjct: 265 GN--NDCGQIGLRNVTSQGHLYPCPITNE----PIVQIVCGQSHSAFITASGKLFMCGDG 318

Query: 431 TFGALGHGDRSSTSVPREVETL--KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
            +G LG  D +  + P  V     K L   M SCG  HT    E       +N L   K
Sbjct: 319 KYGKLGI-DVNQITTPTLVLAFVDKNLNVQMVSCGGNHTLIHAEPLDNELTNNSLQQIK 376



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/241 (28%), Positives = 105/241 (43%), Gaps = 28/241 (11%)

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +  I CG  H+  +   G++F FG  +FG LG G   +   P  V++LK  K    +CG 
Sbjct: 36  VIEISCGEEHSGIVCKNGRVFCFGKNSFGQLGLGHTENVYKPNCVKSLKPDKVKHIACGR 95

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH--GDAEPRVVPLCVKVSDDISFC 522
            HT    E            +  ++ +GD ++GQLG    D     VP+ V   +D +  
Sbjct: 96  SHTIVSTE------------NNIVYGFGDNSDGQLGQSVADVTHSDVPIEVTRFNDKNII 143

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLG-----SPGSTGKFPTRIEGNIKHRYIEDIA 577
           +++ G   T AL   G V+  GS    QLG             PT +   +   Y   ++
Sbjct: 144 QLSAGSYHTAALLENGDVYVWGSNSDRQLGLNSMDDDSVNVSVPTIVPIALPVLY---VS 200

Query: 578 CGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           CG  H A V+   ++YT G    G+LGHG        +L      +++  V CG+N T A
Sbjct: 201 CGHTHTAFVTRIGDLYTCGDREYGKLGHG------LWSLSRVDTTEKIVKVSCGANHTIA 254

Query: 638 I 638
           +
Sbjct: 255 L 255



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 10/105 (9%)

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
            +  TG VF+ G + +            P+     I++  + +I+CG  H  +V     V
Sbjct: 6   VIPETGAVFTYGKSSFAD--------NIPSHFF--IRNDPVIEISCGEEHSGIVCKNGRV 55

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           + +GK + GQLG G  EN   P  V++L+  +VK + CG + T  
Sbjct: 56  FCFGKNSFGQLGLGHTENVYKPNCVKSLKPDKVKHIACGRSHTIV 100


>gi|260814706|ref|XP_002602055.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
 gi|229287360|gb|EEN58067.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
          Length = 833

 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 170/348 (48%), Gaps = 44/348 (12%)

Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
           +VT+  +++ WG  S  +L  G +  +  PKL  A   +N   +  G++ T  V   G +
Sbjct: 372 MVTENSEVYVWGSNSSHQLAEGSQEKILQPKLSPAF--ANAQTIEAGQYCTFVVYSDGTV 429

Query: 370 YTWGDGIH-NLGL--------LGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
              G G +  LGL        L +++    ++ RK         ISS      HT A+T+
Sbjct: 430 RACGKGSYGRLGLGDSNNQTTLKKLNFDHRYVIRK---------ISSSKGSDGHTLALTA 480

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVWHTAAIVEVAGKTSG 479
            G++F++GDG +G LGHG+ S+   P++++   + K V + S G  H+AA+ E       
Sbjct: 481 DGEVFSWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAAVTE------- 533

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRV---------VPLCVKVSDDISFCKVACGHSI 530
                  +LFTWG+G  G+LGHGD+  ++          P  ++    +   KV CG   
Sbjct: 534 -----DGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQS 588

Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           ++ALT+TGQ+F+ G       GSP ST   P  +E  + +  I D+ACG  H   ++  +
Sbjct: 589 SLALTSTGQLFAWGCGACLGCGSPESTALRPKLVE-ELANTRIVDVACGDSHCLALTHDN 647

Query: 591 EVYTWGKGANGQLGHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAA 637
           EVY WG  A GQ G G +++  T P  V  L    V  +  G++ + A
Sbjct: 648 EVYAWGNNAMGQCGQGHSQSPITKPKKVVGLDGVTVHQISAGTSHSLA 695



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 172/360 (47%), Gaps = 43/360 (11%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +V++WG    + L  G+          +   L PK+  S    +AQ+I  G     +V  
Sbjct: 378 EVYVWGSNSSHQLAEGS----------QEKILQPKL--SPAFANAQTIEAGQYCTFVVYS 425

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMV------ACGEFHTCAVTLSG 367
            G + + G+GS G+LG G   D +    +  LN  + +++         + HT A+T  G
Sbjct: 426 DGTVRACGKGSYGRLGLG---DSNNQTTLKKLNFDHRYVIRKISSSKGSDGHTLALTADG 482

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           ++++WGDG  + G LG  +  +   P+++ G ++G  + SI  G  H+AA+T  G+LFT+
Sbjct: 483 EVFSWGDG--DYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAAVTEDGELFTW 540

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK- 486
           G+G +G LGHGD +      +   + + K + A  G++    I +V   +  S  L+S  
Sbjct: 541 GEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLY----IRKVCCGSQSSLALTSTG 596

Query: 487 KLFTWGDGAEGQLGHGDAEPRVV-PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
           +LF WG GA   LG G  E   + P  V+   +     VACG S  +ALT   +V++ G+
Sbjct: 597 QLFAWGCGA--CLGCGSPESTALRPKLVEELANTRIVDVACGDSHCLALTHDNEVYAWGN 654

Query: 546 ADYGQLG-----SPGSTGKFPTRIEGNIKHRYIEDIACGSYH---IAVVSSKSEVYTWGK 597
              GQ G     SP +  K    ++G   H+    I+ G+ H      + +  +V  W +
Sbjct: 655 NAMGQCGQGHSQSPITKPKKVVGLDGVTVHQ----ISAGTSHSLAWTALPTDRQVVAWHR 710



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 90/162 (55%), Gaps = 17/162 (10%)

Query: 492 GDGAEGQLGHGDAEPRVVPLCVK-----VSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           G G+ G+LG GD+  +     +      V   IS  K + GH  T+ALTA G+VFS G  
Sbjct: 433 GKGSYGRLGLGDSNNQTTLKKLNFDHRYVIRKISSSKGSDGH--TLALTADGEVFSWGDG 490

Query: 547 DYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           DYG+LG    ST K+P +I+G ++ + ++ I+ G  H A V+   E++TWG+G  G+LGH
Sbjct: 491 DYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAAVTEDGELFTWGEGDYGRLGH 550

Query: 606 GDNENK---------QTPTLVEALRDKQVKSVVCGSNFTAAI 638
           GD+  K           P ++EAL    ++ V CGS  + A+
Sbjct: 551 GDSNRKLGHGDTNRVYKPKVIEALVGLYIRKVCCGSQSSLAL 592



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 135/293 (46%), Gaps = 39/293 (13%)

Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
           VT + ++Y WG    +    G   +I   +  K+S      Q  +I  G + T  + S G
Sbjct: 373 VTENSEVYVWGSNSSHQLAEGSQEKI---LQPKLSPAFANAQ--TIEAGQYCTFVVYSDG 427

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            +   G G++G LG GD ++ +      TLK+L         +    ++     + GS+G
Sbjct: 428 TVRACGKGSYGRLGLGDSNNQT------TLKKLN--------FDHRYVIRKISSSKGSDG 473

Query: 483 -----LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK-VACGHSITIALTA 536
                 +  ++F+WGDG  G+LGHG++  +  P  ++ +      K ++ G+  + A+T 
Sbjct: 474 HTLALTADGEVFSWGDGDYGKLGHGNSSTQKYPKQIQGALQGKVVKSISAGYRHSAAVTE 533

Query: 537 TGQVFSMGSADYGQLGSPGSTGKF----------PTRIEGNIKHRYIEDIACGSYHIAVV 586
            G++F+ G  DYG+LG   S  K           P  IE  +   YI  + CGS     +
Sbjct: 534 DGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVG-LYIRKVCCGSQSSLAL 592

Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAAI 638
           +S  +++ WG GA   LG G  E+    P LVE L + ++  V CG +   A+
Sbjct: 593 TSTGQLFAWGCGAC--LGCGSPESTALRPKLVEELANTRIVDVACGDSHCLAL 643



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 16/115 (13%)

Query: 253 GDVFIWGEG--LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
           G +F WG G  LG G             +    AL PK++E         +ACG  H + 
Sbjct: 596 GQLFAWGCGACLGCG-------------SPESTALRPKLVEELANTRIVDVACGDSHCLA 642

Query: 311 VTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGEFHTCAVT 364
           +T   ++++WG  + G+ G G  ++ ++ PK +  L+G  +H ++ G  H+ A T
Sbjct: 643 LTHDNEVYAWGNNAMGQCGQGHSQSPITKPKKVVGLDGVTVHQISAGTSHSLAWT 697


>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Takifugu rubripes]
          Length = 1042

 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 153/320 (47%), Gaps = 18/320 (5%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           + CG KH V +   G +++ G    G+LGH  E     P+ + AL+   I  V+ GE HT
Sbjct: 39  VGCGLKHTVFLLDDGTVYTCGCNDLGQLGH--EKPRKKPEHVVALDAQIIVAVSGGESHT 96

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+   G +++WG G      L    E    +PR +   +  +QI+ + CG  H+ A++ 
Sbjct: 97  LALNDKGQIFSWGLGSDGQLGLNNFEECVR-VPRNIKC-LSDVQIAQVACGYRHSHALSK 154

Query: 421 AGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
            G++F++G   FG LG G   SS S P+ +++L+ +     S G  H+ AI         
Sbjct: 155 GGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAIT-------- 206

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                S  +F WG    GQLG  D   R  P  +K         V+CG   T ALT  G 
Sbjct: 207 ----LSGAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGG 262

Query: 540 VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKG 598
           VF+ G+  YGQLG   +  +   R    +    +  I+CG  H +A   S  ++Y++G G
Sbjct: 263 VFTFGAGGYGQLGHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMYSFGLG 322

Query: 599 ANGQLGHGDNENKQTPTLVE 618
            NGQLG     N+++P  V+
Sbjct: 323 GNGQLGTRSTCNRKSPAPVK 342



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 137/269 (50%), Gaps = 21/269 (7%)

Query: 291 ESTVVLDAQSIAC---GSKHAVLVTKQGQIFSWGEGSGGKLG-HGVEADVSYPKLIDALN 346
           E  V LDAQ I     G  H + +  +GQIFSWG GS G+LG +  E  V  P+ I  L+
Sbjct: 76  EHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGSDGQLGLNNFEECVRVPRNIKCLS 135

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
              I  VACG  H+ A++  G +++WG +    LGL    S IS   P+ +   ++G+  
Sbjct: 136 DVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIS--TPQIIQ-SLQGIPF 192

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
           + +  G  H+ AIT +G +F +G   FG LG  D +    P  +++L+  + +  SCG  
Sbjct: 193 AQLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGED 252

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
           HTAA+ +  G            +FT+G G  GQLGH      + P  V         +++
Sbjct: 253 HTAALTKEGG------------VFTFGAGGYGQLGHNSTNHEINPRKVFELMGNIVTQIS 300

Query: 526 CGHSITIALT-ATGQVFSMGSADYGQLGS 553
           CG   T+A T ++G+++S G    GQLG+
Sbjct: 301 CGRQHTLAFTPSSGKMYSFGLGGNGQLGT 329



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 155/329 (47%), Gaps = 27/329 (8%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  +  +G  +  V CG  HT  +   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQ---ISSICCGPWHTAAITSAGKLFTFGDGT 431
             ++LG LG      H  PRK    +  L    I ++  G  HT A+   G++F++G G+
Sbjct: 60  -CNDLGQLG------HEKPRKKPEHVVALDAQIIVAVSGGESHTLALNDKGQIFSWGLGS 112

Query: 432 FGALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            G LG  +      VPR ++ L +++    +CG  H+ A+         S G    ++F+
Sbjct: 113 DGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHAL---------SKG---GQVFS 160

Query: 491 WGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
           WG    GQLG G     +  P  ++    I F +++ G + + A+T +G VF  G   +G
Sbjct: 161 WGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFG 220

Query: 550 QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           QLG   +  ++   +  +++ + +  ++CG  H A ++ +  V+T+G G  GQLGH    
Sbjct: 221 QLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTN 280

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           ++  P  V  L    V  + CG   T A 
Sbjct: 281 HEINPRKVFELMGNIVTQISCGRQHTLAF 309



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 128/263 (48%), Gaps = 24/263 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG G  +G LG  +N  E          +P+ ++    +    +ACG +H+  ++
Sbjct: 103 GQIFSWGLG-SDGQLG--LNNFE------ECVRVPRNIKCLSDVQIAQVACGYRHSHALS 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           K GQ+FSWG+   G+LG G+  + +S P++I +L G     ++ G  H+ A+TLSG ++ 
Sbjct: 154 KGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   +  G LG       W P  +   +   ++  + CG  HTAA+T  G +FTFG G 
Sbjct: 214 WGR--NKFGQLGLNDTNDRWFPALLKS-LRSQRVIYVSCGEDHTAALTKEGGVFTFGAGG 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           +G LGH   +    PR+V  L        SCG  HT A              SS K++++
Sbjct: 271 YGQLGHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTP-----------SSGKMYSF 319

Query: 492 GDGAEGQLGHGDAEPRVVPLCVK 514
           G G  GQLG      R  P  VK
Sbjct: 320 GLGGNGQLGTRSTCNRKSPAPVK 342



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 133/280 (47%), Gaps = 21/280 (7%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+  +    LG + E     PRK      G ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVIEPRKCEF-FHGKKVCDVGCGLKHTVFLLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-K 487
               G LGH        P  V  L                 IV V+G  S +  L+ K +
Sbjct: 60  CNDLGQLGH--EKPRKKPEHVVALD-------------AQIIVAVSGGESHTLALNDKGQ 104

Query: 488 LFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           +F+WG G++GQLG  + E  V VP  +K   D+   +VACG+  + AL+  GQVFS G  
Sbjct: 105 IFSWGLGSDGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQN 164

Query: 547 DYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
            +GQLG    GS+   P  I+ +++      ++ G  H   ++    V+ WG+   GQLG
Sbjct: 165 QFGQLGLGMHGSSISTPQIIQ-SLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLG 223

Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
             D  ++  P L+++LR ++V  V CG + TAA+    GV
Sbjct: 224 LNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGGV 263


>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
 gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
          Length = 1060

 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 177/371 (47%), Gaps = 30/371 (8%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           ++ WG    +G LG  + G+E         ++P+ ++ +   +   + CG+ H + +TK+
Sbjct: 3   IYCWGNT-AHGELG--LGGIE-----EEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKE 54

Query: 315 GQIFSWGEGSGGKLGHGVEA------DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           G++++ G    G+LGH ++        +S  K + +L    I  ++CG  H+ A+T  G 
Sbjct: 55  GKMYACGNNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQ 114

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +++WG   + +G LG  +E       ++   +    +  I  G +H  A+T+ G+L+ +G
Sbjct: 115 VFSWGS--NAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWG 172

Query: 429 DGTFGALGHGDRSS-TSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
             ++G LG G  S    +P  +++L  +     +CG  H+ A+ +            S  
Sbjct: 173 SNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSK------------SGA 220

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           +F WG    GQLG  D   R  P  ++    +    ++CG   ++ LT  G VF+ G+  
Sbjct: 221 IFGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGT 280

Query: 548 YGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHG 606
           +GQLG    + +   R    +    I  IACG  H +A V S+ ++Y +G G  GQLG G
Sbjct: 281 FGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIG 340

Query: 607 DNENKQTPTLV 617
              N  TP +V
Sbjct: 341 MVGNHSTPQIV 351



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 158/337 (46%), Gaps = 25/337 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           I+ WG  + G+LG G   E  V  P+ +D      +  V CG  HT  +T  G +Y  G+
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGN 62

Query: 375 GIHNLGLLGQ-VSEISHWIPR----KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
             H  G LG  +  + +  PR    K    +E   I+ I CG  H+ A+T+ G++F++G 
Sbjct: 63  NDH--GQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSWGS 120

Query: 430 GTFGALGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
              G LGH  +      PR ++ +     V  + G +H  A+         +NG    +L
Sbjct: 121 NAVGQLGHDAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALT--------NNG----EL 168

Query: 489 FTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + WG  + GQLG G    +V +P  ++    +    +ACG + + A++ +G +F  G   
Sbjct: 169 YAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFGWGKNT 228

Query: 548 YGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
           +GQLG      + +PT++   ++   +  I+CG      ++++  V+T G G  GQLGHG
Sbjct: 229 FGQLGLNDLNSRCYPTQLR-TLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHG 287

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
              N+  P  V  L   ++  + CG   T A    +G
Sbjct: 288 SCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRG 324



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 133/286 (46%), Gaps = 25/286 (8%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +Y WG+  H    LG + E    +PRK+    +  ++  + CG  HT  +T  GK++  G
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWS-QADEVVRVECGTSHTLFLTKEGKMYACG 61

Query: 429 DGTFGALGH------GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           +   G LGH        R   S  + + +L+       SCG  H+ A+            
Sbjct: 62  NNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWG-------- 113

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEP--RVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
               ++F+WG  A GQLGH DAE   +  P  +K        ++A G    +ALT  G++
Sbjct: 114 ----QVFSWGSNAVGQLGH-DAENGRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGEL 168

Query: 541 FSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           ++ GS  YGQLG   ++ K   PT I+ ++    I  IACG  H   VS    ++ WGK 
Sbjct: 169 YAWGSNSYGQLGIGTTSEKVPMPTLIQ-SLAGVPIAFIACGGNHSFAVSKSGAIFGWGKN 227

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
             GQLG  D  ++  PT +  LR   V+ + CG +F+  +    GV
Sbjct: 228 TFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGV 273



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 123/263 (46%), Gaps = 24/263 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG      L   A NG + +         P+++++        IA G  H + +T
Sbjct: 113 GQVFSWGSNAVGQLGHDAENGRQPT---------PRMIKAIGAKHVVQIASGQYHCLALT 163

Query: 313 KQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             G++++WG  S G+LG G  ++ V  P LI +L G  I  +ACG  H+ AV+ SG ++ 
Sbjct: 164 NNGELYAWGSNSYGQLGIGTTSEKVPMPTLIQSLAGVPIAFIACGGNHSFAVSKSGAIFG 223

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   +  G LG     S   P ++   +  L +  I CG   +  +T+ G +FT G GT
Sbjct: 224 WGK--NTFGQLGLNDLNSRCYPTQLR-TLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGT 280

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           FG LGHG  S+  VPR+V  L   K    +CG  HT A V   GK  G           +
Sbjct: 281 FGQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRGKIYG-----------F 329

Query: 492 GDGAEGQLGHGDAEPRVVPLCVK 514
           G G  GQLG G       P  V+
Sbjct: 330 GLGGVGQLGIGMVGNHSTPQIVR 352


>gi|348683616|gb|EGZ23431.1| hypothetical protein PHYSODRAFT_258036 [Phytophthora sojae]
          Length = 1271

 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 157/334 (47%), Gaps = 37/334 (11%)

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN----LGLLGQVSEISHW 391
           V  PK +  LNG  I  VACG  H   +T +GD+Y++GD        + +    +   + 
Sbjct: 485 VLRPKQVSLLNGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKAAAVTIATNANSADND 544

Query: 392 IPRKVSGQM------EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
             R +S ++          I+ I CG  H+ AIT AG+L+T+G G  G LGHGD    +V
Sbjct: 545 YTRSISKELALEKALHRTTIAMISCGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAV 604

Query: 446 PREVETLKELKTVMASCGV----WHTAA--IVEVAGKTSGSNGL----------SSKKLF 489
           PR+V +L       ASCG+    W      IV     T  SN +              +F
Sbjct: 605 PRKVMSLLRESVASASCGLGDNKWRDTPHQIVGFPQGTRISNVVCGWNFTAALDRQGNIF 664

Query: 490 TWGDGAEGQLGHGDAEP-RVVPLCV----KVSDDISFCKVACGHSITIALTATGQVFSMG 544
           TWG   EGQ G G  +  +VVP CV    +V+   +   VACG++ T+ LTA+G+++S G
Sbjct: 665 TWGKTGEGQCGLGYVDKDQVVPRCVEKLREVAAGSAAVDVACGYTHTVVLTASGELYSWG 724

Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
             +YGQL    +  + P+  +       +  + CG++H    + K  ++ WG  + G  G
Sbjct: 725 LGEYGQL----ARVQLPS--DALCAPDQLTRVYCGAFHSIATTEKRVMFAWGLNSYGACG 778

Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G   NK  P  ++    +    V CG  +T A+
Sbjct: 779 LGHTANKDKPERIDCFSSQTELVVACGHKYTIAL 812



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 130/288 (45%), Gaps = 58/288 (20%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
           L K L  T +     I+CG++H++ +T  G++++WG G  G+LGHG   D + P+ + +L
Sbjct: 555 LEKALHRTTI---AMISCGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMSL 611

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
              ++   +CG          GD   W D                  P ++ G  +G +I
Sbjct: 612 LRESVASASCG---------LGD-NKWRD-----------------TPHQIVGFPQGTRI 644

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFG--ALGHGDRSSTSVPREVETLKEL----KTVM 459
           S++ CG   TAA+   G +FT+G    G   LG+ D+    VPR VE L+E+      V 
Sbjct: 645 SNVVCGWNFTAALDRQGNIFTWGKTGEGQCGLGYVDKDQV-VPRCVEKLREVAAGSAAVD 703

Query: 460 ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDD 518
            +CG  HT  +             +S +L++WG G  GQL       RV +P     + D
Sbjct: 704 VACGYTHTVVLT------------ASGELYSWGLGEYGQLA------RVQLPSDALCAPD 745

Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIE 565
               +V CG   +IA T    +F+ G   YG  G   +  K  P RI+
Sbjct: 746 -QLTRVYCGAFHSIATTEKRVMFAWGLNSYGACGLGHTANKDKPERID 792



 Score = 46.6 bits (109), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 38/70 (54%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           + CG+ H++  T++  +F+WG  S G  G G  A+   P+ ID  +     +VACG  +T
Sbjct: 750 VYCGAFHSIATTEKRVMFAWGLNSYGACGLGHTANKDKPERIDCFSSQTELVVACGHKYT 809

Query: 361 CAVTLSGDLY 370
            A+ +   LY
Sbjct: 810 IALEVDPALY 819


>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
 gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
          Length = 1015

 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 172/370 (46%), Gaps = 31/370 (8%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALL-PKVLESTVVLDAQSIACGSKHAVLVTK 313
           +F WG    NG LG  + G+E       D +L PK          + ++CG +H V V  
Sbjct: 1   MFCWGAA-RNGELG--LGGIE------EDVILAPKEQPFGATKAMREVSCGRQHTVFVLA 51

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           +G +++ G    G+LG   +     P +I AL+  +I  V+CG++H   V     +++WG
Sbjct: 52  EGTVYTCGSNDYGQLGQ--DKGHKRPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWG 109

Query: 374 DGIHNLGLLGQVSEI---SHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
               + G LG   E    +   PR V  ++  LQI  + CG  H+ A+++ G++F++G+ 
Sbjct: 110 --YDDCGQLGHTLEAGGNNSRRPRMVK-ELSSLQIVQVACGGKHSLALSNDGRIFSWGNN 166

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
           + G LG G   +   P+E+ +L    T +  C +        VAG +       S  +F 
Sbjct: 167 SHGQLGIGSTKNQPKPQELTSL----TGIPFCQI--------VAGGSHSFVLSKSGAVFG 214

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           +G    GQLG GD   R  P  VK    +    ++CG   T  LT  G V + G+  YGQ
Sbjct: 215 FGRNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQ 274

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG   +  +   R    +    +  +ACG  H +A V S   +Y++G G NGQLG     
Sbjct: 275 LGHNSNNHEALPRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLGSKGTT 334

Query: 610 NKQTPTLVEA 619
           N  TP  V+ 
Sbjct: 335 NCNTPITVDG 344



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 161/328 (49%), Gaps = 26/328 (7%)

Query: 317 IFSWGEGSGGKLGHG-VEADVSY-PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +F WG    G+LG G +E DV   PK         +  V+CG  HT  V   G +YT G 
Sbjct: 1   MFCWGAARNGELGLGGIEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++ G LGQ  +  H  P  ++  ++   I  + CG +H   +    ++F++G    G 
Sbjct: 61  --NDYGQLGQ--DKGHKRPTVITA-LDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQ 115

Query: 435 LGH---GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           LGH      +++  PR V+ L  L+ V  +CG  H+ A+         SN     ++F+W
Sbjct: 116 LGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLAL---------SN---DGRIFSW 163

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           G+ + GQLG G  + +  P  +     I FC++  G S +  L+ +G VF  G   +GQL
Sbjct: 164 GNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQL 223

Query: 552 GSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           G  G TG  K+PT ++ +++   +  I+CG  H AV++    V T+G G+ GQLGH  N 
Sbjct: 224 GL-GDTGDRKYPTHVK-SLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNSNN 281

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           ++  P  V  L   +V  + CG   T A
Sbjct: 282 HEALPRKVFELMGLEVTQLACGRMHTMA 309



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 141/302 (46%), Gaps = 40/302 (13%)

Query: 255 VFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
           VF WG      LG+ L  G  N        RR    P++++    L    +ACG KH++ 
Sbjct: 105 VFSWGYDDCGQLGHTLEAGGNN-------SRR----PRMVKELSSLQIVQVACGGKHSLA 153

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           ++  G+IFSWG  S G+LG G   +   P+ + +L G     +  G  H+  ++ SG ++
Sbjct: 154 LSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVF 213

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
             G G +  G LG         P  V   +  L+++ I CG  HTA +T  G + TFG G
Sbjct: 214 --GFGRNTFGQLGLGDTGDRKYPTHVK-SLRSLKVTHISCGEEHTAVLTLDGGVLTFGAG 270

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
           ++G LGH   +  ++PR+V  L  L+    +CG  HT A VE           SS ++++
Sbjct: 271 SYGQLGHNSNNHEALPRKVFELMGLEVTQLACGRMHTMAYVE-----------SSGRIYS 319

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHS------ITIALTATG-QVFSM 543
           +G G  GQLG         P+ V    D  F   A  +S      +  A+TA G Q F++
Sbjct: 320 FGLGGNGQLGSKGTTNCNTPITV----DGPFVPFAGDNSLEEQCYVVQAITAGGDQAFAL 375

Query: 544 GS 545
            S
Sbjct: 376 AS 377



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 114/246 (46%), Gaps = 23/246 (9%)

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +  + CG  HT  + + G ++T G   +G LG  D+     P  +  L        SCG 
Sbjct: 36  MREVSCGRQHTVFVLAEGTVYTCGSNDYGQLGQ-DKGHKR-PTVITALDTQSIQQVSCGD 93

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH-----GDAEPRVVPLCVKVSDDI 519
           +H   + +              ++F+WG    GQLGH     G+   R  P  VK    +
Sbjct: 94  YHNLVVND------------KYQVFSWGYDDCGQLGHTLEAGGNNSRR--PRMVKELSSL 139

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIE-GNIKHRYIEDIAC 578
              +VACG   ++AL+  G++FS G+  +GQLG  GST   P   E  ++       I  
Sbjct: 140 QIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGI-GSTKNQPKPQELTSLTGIPFCQIVA 198

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G  H  V+S    V+ +G+   GQLG GD  +++ PT V++LR  +V  + CG   TA +
Sbjct: 199 GGSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVL 258

Query: 639 CLHKGV 644
            L  GV
Sbjct: 259 TLDGGV 264


>gi|260791114|ref|XP_002590585.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
 gi|229275780|gb|EEN46596.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
          Length = 710

 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 145/295 (49%), Gaps = 24/295 (8%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           ++ACG +H  LVT+ G+++++G    G+LG G     S P  + +L      +VACG  H
Sbjct: 39  AVACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKLVACGRSH 98

Query: 360 TCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
           T   T  G +Y WG G    LGL    +E +   P  +    + +   S+ CG +HTA +
Sbjct: 99  TLIATGDGKVYVWGGGSEGQLGLGEDTTECTE--PTLLDFDSKAI---SVSCGYYHTAVV 153

Query: 419 TSAGKLFTFGDGTFGALG--HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           T  G L+TFG+  +G LG  + D  S+  P++V  +KE K     CG  HT AI E    
Sbjct: 154 TEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIKE-KVKFVVCGGGHTTAIAE---- 208

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDA-EPRVVPLCVKVSDDISFCKVACGHSITIALT 535
                   S  ++T+G+GA GQLGHG++      P  V+   D      +CG + T  +T
Sbjct: 209 --------SGAVYTFGNGASGQLGHGNSLLESPTPHRVERFRDADCKHASCGENFTAVIT 260

Query: 536 ATGQVFSMGSADYGQ--LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
             G +++ G   +G+  LG    T +F            ++ +ACG  H+ V++S
Sbjct: 261 GKGHLYTFGDGRHGKLGLGDESFTNQFRPFKVARFNKFQVQWVACGGCHMMVIAS 315



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 139/297 (46%), Gaps = 45/297 (15%)

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
           +I ++ CG  HTA +T  G+L+TFG   +G LG G   + S P  V++LK  K  + +CG
Sbjct: 36  RICAVACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKLVACG 95

Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-----AEPRVVPLCVKVSDD 518
             HT                   K++ WG G+EGQLG G+      EP ++        D
Sbjct: 96  RSHTLIAT------------GDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDF------D 137

Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLG---SPGSTGKFPTRIEGNIKHRYIED 575
                V+CG+  T  +T  G +++ G  +YG+LG   S   +   P ++ G IK + ++ 
Sbjct: 138 SKAISVSCGYYHTAVVTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTG-IKEK-VKF 195

Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN-ENKQTPTLVEALRDKQVKSVVCGSNF 634
           + CG  H   ++    VYT+G GA+GQLGHG++     TP  VE  RD   K   CG NF
Sbjct: 196 VVCGGGHTTAIAESGAVYTFGNGASGQLGHGNSLLESPTPHRVERFRDADCKHASCGENF 255

Query: 635 TAAIC-----------LHKGVSIADHSICSGCRNQFN-FRRRRHNCYNCGLVYCKLC 679
           TA I             H  + + D S      NQF  F+  R N +    V C  C
Sbjct: 256 TAVITGKGHLYTFGDGRHGKLGLGDESFT----NQFRPFKVARFNKFQVQWVACGGC 308



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/253 (34%), Positives = 126/253 (49%), Gaps = 22/253 (8%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDAL 345
           P  ++S     A+ +ACG  H ++ T  G+++ WG GS G+LG G +  + + P L+D  
Sbjct: 78  PSCVKSLKHEKAKLVACGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDF- 136

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
             S    V+CG +HT  VT  G+LYT+G+  +    L      S   P+KV+G  E  ++
Sbjct: 137 -DSKAISVSCGYYHTAVVTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIKE--KV 193

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGV 464
             + CG  HT AI  +G ++TFG+G  G LGHG+    +  P  VE  ++     ASCG 
Sbjct: 194 KFVVCGGGHTTAIAESGAVYTFGNGASGQLGHGNSLLESPTPHRVERFRDADCKHASCGE 253

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE--PRVVPLCVKVSDDISFC 522
             TA I    GK           L+T+GDG  G+LG GD     +  P  V   +     
Sbjct: 254 NFTAVIT---GKGH---------LYTFGDGRHGKLGLGDESFTNQFRPFKVARFNKFQVQ 301

Query: 523 KVACG--HSITIA 533
            VACG  H + IA
Sbjct: 302 WVACGGCHMMVIA 314



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 140/290 (48%), Gaps = 28/290 (9%)

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
           I  VACG+ HT  VT +G LYT+G   ++ G LG     +   P  V   ++  +   + 
Sbjct: 37  ICAVACGDEHTALVTENGRLYTFGS--NDWGQLGLGHTKTASKPSCVK-SLKHEKAKLVA 93

Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTA 468
           CG  HT   T  GK++ +G G+ G LG G D +  + P  ++   + K +  SCG +HTA
Sbjct: 94  CGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDF--DSKAISVSCGYYHTA 151

Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG--HGDAEPRVVPLCVK-VSDDISFCKVA 525
            + E               L+T+G+   G+LG  + D +    P  V  + + + F  V 
Sbjct: 152 VVTEDG------------NLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIKEKVKF--VV 197

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHI 583
           CG   T A+  +G V++ G+   GQLG   S  + PT  R+E   +    +  +CG    
Sbjct: 198 CGGGHTTAIAESGAVYTFGNGASGQLGHGNSLLESPTPHRVE-RFRDADCKHASCGENFT 256

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCG 631
           AV++ K  +YT+G G +G+LG GD    N+  P  V      QV+ V CG
Sbjct: 257 AVITGKGHLYTFGDGRHGKLGLGDESFTNQFRPFKVARFNKFQVQWVACG 306



 Score = 50.4 bits (119), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 14/101 (13%)

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGN--IKHRYIEDIACGSYHIAVVSSKSEVYT 594
           TG +F+ G +            KF   I     I++  I  +ACG  H A+V+    +YT
Sbjct: 11  TGAIFTFGKS------------KFAENISSKFWIRNDRICAVACGDEHTALVTENGRLYT 58

Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           +G    GQLG G  +    P+ V++L+ ++ K V CG + T
Sbjct: 59  FGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKLVACGRSHT 99


>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
           vinifera]
          Length = 489

 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 172/353 (48%), Gaps = 49/353 (13%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDAL---------------------NGSNIHMV- 353
           Q+ SWG G+ G+LG G+E    YP  +  L                     N S +  V 
Sbjct: 36  QLLSWGRGASGQLGGGIEEMRLYPSPVATLHLPPSFNLCPIPGRLCLPSVENASGLTEVG 95

Query: 354 -ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
            +CG FH+ ++ + G L+ WG G  + G LG   E   ++P  ++  ++   I S   G 
Sbjct: 96  ISCGLFHS-SLVVDGKLWIWGKG--DGGRLGFGQEYPAFLP-TLNPNLD--SIRSTALGG 149

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
            H+ A++S G++FT+G G FGALGH       +PR VE     K    +    HTAAI E
Sbjct: 150 VHSVALSSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSWNAKIRHIATAGTHTAAITE 209

Query: 473 VAGKTSGSNGLSSKKLFTWG-DGAEGQLGHG------DAEPRVVPLCVKVSDDISFCKVA 525
                       S +L+TWG D  +G+LG G      +     +P  VK +  +    V+
Sbjct: 210 ------------SGELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVK-ALPVPVAAVS 256

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAV 585
           CG   T+ LT  GQ+++ G+    +LG     G +  +   +++   I  IA G YH   
Sbjct: 257 CGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQIASGGYHSLA 316

Query: 586 VSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           ++   +V +WG G +GQLGH   EN++ PT++EAL D+ V  + CG + +AAI
Sbjct: 317 LTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEALADEHVIYIACGGSSSAAI 369



 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 167/341 (48%), Gaps = 36/341 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDA-QSIACGSKHAVLV 311
           G ++IWG+G          +G  +       A LP +  +   LD+ +S A G  H+V +
Sbjct: 109 GKLWIWGKG----------DGGRLGFGQEYPAFLPTLNPN---LDSIRSTALGGVHSVAL 155

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           +  GQ+F+WG G  G LGH V      P++++    + I  +A    HT A+T SG+LYT
Sbjct: 156 SSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSWNAKIRHIATAGTHTAAITESGELYT 215

Query: 372 WG--DGIHNLGL---LGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
           WG   G   LGL    G        IP KV  +   + ++++ CG + T  +T  G+L+ 
Sbjct: 216 WGRDQGDGRLGLGPNCGPNEGGGLSIPSKV--KALPVPVAAVSCGGFFTMVLTQEGQLWN 273

Query: 427 FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
           +G  +   LG GD+     P+ + +L++++ +  + G +H+ A+ +              
Sbjct: 274 WGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQIASGGYHSLALTD------------DG 321

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           K+ +WG G  GQLGH   E + +P  ++   D     +ACG S + A+T  G+++  G+A
Sbjct: 322 KVLSWGYGQHGQLGHSSIENQKIPTVIEALADEHVIYIACGGSSSAAITDNGKLYMWGNA 381

Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
              QLG PG     P  +E  +K   +ED   G +++  V+
Sbjct: 382 KDSQLGVPGLPETQPLPVE--VKF-LMEDDRLGPHNVLSVA 419



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 196/444 (44%), Gaps = 56/444 (12%)

Query: 228 SFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLP 287
           SF   +S++VS+        D      +  WG G  +G LGG +  + +  +      LP
Sbjct: 10  SFMRRMSTSVSAPLLWKAENDAVTTVQLLSWGRG-ASGQLGGGIEEMRLYPSPVATLHLP 68

Query: 288 KV--------------LESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
                           +E+   L    I+CG  H+ LV   G+++ WG+G GG+LG G E
Sbjct: 69  PSFNLCPIPGRLCLPSVENASGLTEVGISCGLFHSSLVV-DGKLWIWGKGDGGRLGFGQE 127

Query: 334 ADVSYPKLIDALNGS--NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHW 391
               YP  +  LN +  +I   A G  H+ A++  G ++TWG G    G LG        
Sbjct: 128 ----YPAFLPTLNPNLDSIRSTALGGVHSVALSSLGQVFTWGYG--GFGALGHSVYHREL 181

Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG----DGTFGA---LGHGDRSSTS 444
           +PR V G     +I  I     HTAAIT +G+L+T+G    DG  G     G  +    S
Sbjct: 182 LPRMVEGSWNA-KIRHIATAGTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEGGGLS 240

Query: 445 VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA 504
           +P +V+ L  +     SCG + T  + +              +L+ WG  +  +LG GD 
Sbjct: 241 IPSKVKALP-VPVAAVSCGGFFTMVLTQ------------EGQLWNWGANSNYELGRGDK 287

Query: 505 EPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTR 563
                P  +    D+   ++A G   ++ALT  G+V S G   +GQLG S     K PT 
Sbjct: 288 VGGWKPQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTV 347

Query: 564 IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG-HGDNENKQTPTLVEALRD 622
           IE  +   ++  IACG    A ++   ++Y WG   + QLG  G  E +  P  V+ L +
Sbjct: 348 IEA-LADEHVIYIACGGSSSAAITDNGKLYMWGNAKDSQLGVPGLPETQPLPVEVKFLME 406

Query: 623 ------KQVKSVVCGSNFTAAICL 640
                   V SV  G++   A+CL
Sbjct: 407 DDRLGPHNVLSVAVGASH--AMCL 428


>gi|95007393|emb|CAJ20613.1| uvb-resistance protein uvr8, putative [Toxoplasma gondii RH]
          Length = 918

 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 167/384 (43%), Gaps = 47/384 (12%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+++++   ++++ ++ G     +V   G+++ WG  S G+LG G   D S P+L+ AL+
Sbjct: 4   PRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRLVKALH 63

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWG------DGIHNLGL-----LGQVSEISHWIPR- 394
           G  +  VAC + HT      G  Y WG       G+H L +     LG  S  +   P  
Sbjct: 64  GKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATGARPEP 123

Query: 395 ----------KVSGQMEGLQISSICCGPWHTAAI----TSAGKLFTFGDGTFGALGHGDR 440
                     +V   + G  I+ + CGP+H+A +         LFT G G  G LGHGD 
Sbjct: 124 LASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGHGDE 183

Query: 441 SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG 500
               +P  V  L+ +     +CG  HTA +             S+  L+TWG  A G+LG
Sbjct: 184 EDRHLPTAVHALENVNITAIACGAHHTACVT------------SAGTLYTWGGAAFGKLG 231

Query: 501 HGDAEPRVVPLCVKVSDDI---SFCKVACGHSITIALTATGQVFSMGSA-DYGQLGSPGS 556
            G      + L   VS  +   +   VA G   +  +T  G++++ G     G      S
Sbjct: 232 LGSTRGSQL-LPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGRRLGHEVQGES 290

Query: 557 TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE-NKQTPT 615
               P R+E  +   ++  + CG  H A +     V+ WG   +  LGHGD E     P 
Sbjct: 291 DEILPRRVEA-LLGLFVIHVVCGDAHTACIVENGNVWAWGT--SRILGHGDPEVPPNRPA 347

Query: 616 LVEALRDKQVKSVVCGSNFTAAIC 639
            + AL  K V  + C S FT A C
Sbjct: 348 CLRALNGKGVVQLSCASTFTVAFC 371



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 108/240 (45%), Gaps = 27/240 (11%)

Query: 243 GSCHEDFDGLGD-----VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLD 297
           G  H  F G+ +     +F  G GL NG LG           D  D  LP  + +   ++
Sbjct: 150 GPYHSAFLGIYEQDRTSLFTCGLGL-NGRLG---------HGDEEDRHLPTAVHALENVN 199

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDA-LNGSNIHMVAC 355
             +IACG+ H   VT  G +++WG  + GKLG G        PK +   L    +  VA 
Sbjct: 200 ITAIACGAHHTACVTSAGTLYTWGGAAFGKLGLGSTRGSQLLPKHVSGPLRNKAVVSVAL 259

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLG--LLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
           G  H+  VT  G+LYTWG G   LG  + G+  EI   +PR+V   + GL +  + CG  
Sbjct: 260 GSQHSACVTTDGELYTWGQG-RRLGHEVQGESDEI---LPRRVEALL-GLFVIHVVCGDA 314

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           HTA I   G ++ +  GT   LGHGD     + P  +  L     V  SC    T A  +
Sbjct: 315 HTACIVENGNVWAW--GTSRILGHGDPEVPPNRPACLRALNGKGVVQLSCASTFTVAFCD 372


>gi|428164106|gb|EKX33145.1| hypothetical protein GUITHDRAFT_120666 [Guillardia theta CCMP2712]
          Length = 606

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 167/342 (48%), Gaps = 36/342 (10%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALN--GSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +F+WG     +LG G      +PKL+  L   G+ I  V+ G  H  A+  +G L+TWG 
Sbjct: 180 LFAWGCSHNYQLGTGQYQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAIDSTGKLFTWGL 239

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             H  G LG  S      P +V    + + I  + CG + +A I+   K+FT+G G+ G 
Sbjct: 240 CDH--GRLGLKSGKDVPYPTRVDFLKDEV-IVDVTCGMYSSACISHDMKVFTWGSGSKGQ 296

Query: 435 LGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG 494
           LGH ++S   +PR V  L  +  V  + G  H AA+                 ++TWG+G
Sbjct: 297 LGHVEKSDEWLPRSVAALHHIPIVQVALGYEHMAALS------------LDGDVYTWGEG 344

Query: 495 AEGQLGHGD----AEPRVVPLCVK-----VSDDISFCKVACGHSITIALTATGQVFSMGS 545
             GQLGHGD    + P+ + L ++     V+D  S   +ACG S+T+ LT  G++ S G 
Sbjct: 345 EHGQLGHGDLNSCSTPKKLLLELENTTGEVADVGSPVLLACGASVTLILTDYGRLISFGM 404

Query: 546 ADYGQLG-SPGSTGKFPTRIEGNI--KHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
           +++G LG         P  I   I  K R++  ++ G  H A V+SK  VYTWG+G  G 
Sbjct: 405 SEFGALGLGEKRLAARPHLITSRIMDKRRFVH-LSAGDEHCAAVTSKGNVYTWGQGCFGA 463

Query: 603 LG------HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +G      + +  + + P  +E   DK+  +  CG N+T  +
Sbjct: 464 VGKPARRAYSNPPDCRKPYKLELPLDKRACATSCGGNYTVIL 505



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 154/329 (46%), Gaps = 41/329 (12%)

Query: 233 LSSAVSSSSQGSCH-EDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE 291
           L + +   S G+ H    D  G +F WG    +G LG   +G ++    R D      L+
Sbjct: 211 LGNGIIDVSYGADHGAAIDSTGKLFTWGL-CDHGRLG-LKSGKDVPYPTRVD-----FLK 263

Query: 292 STVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH 351
             V++D   + CG   +  ++   ++F+WG GS G+LGH  ++D   P+ + AL+   I 
Sbjct: 264 DEVIVD---VTCGMYSSACISHDMKVFTWGSGSKGQLGHVEKSDEWLPRSVAALHHIPIV 320

Query: 352 MVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL--QISSI- 408
            VA G  H  A++L GD+YTWG+G H  G LG     S   P+K+  ++E    +++ + 
Sbjct: 321 QVALGYEHMAALSLDGDVYTWGEGEH--GQLGHGDLNSCSTPKKLLLELENTTGEVADVG 378

Query: 409 -----CCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET--LKELKTVMAS 461
                 CG   T  +T  G+L +FG   FGALG G++   + P  + +  + + + V  S
Sbjct: 379 SPVLLACGASVTLILTDYGRLISFGMSEFGALGLGEKRLAARPHLITSRIMDKRRFVHLS 438

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG------HGDAEPRVVPLCVKV 515
            G  H AA+             S   ++TWG G  G +G      + +      P  +++
Sbjct: 439 AGDEHCAAVT------------SKGNVYTWGQGCFGAVGKPARRAYSNPPDCRKPYKLEL 486

Query: 516 SDDISFCKVACGHSITIALTATGQVFSMG 544
             D   C  +CG + T+ L+  G V  +G
Sbjct: 487 PLDKRACATSCGGNYTVILSKDGCVLVLG 515



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 104/238 (43%), Gaps = 26/238 (10%)

Query: 381 LLGQVSEISHWIPRK--VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG 438
           L+  V+ + H  PR   VSG       S++   P    AI     LF +G      LG G
Sbjct: 145 LVADVAALRHEDPRARVVSGP------SALSLQPRRDEAI----YLFAWGCSHNYQLGTG 194

Query: 439 DRSSTSVPREVETLKELKT--VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
              +   P+ V TL  L    +  S G  H AAI             S+ KLFTWG    
Sbjct: 195 QYQAQPFPKLVSTLTRLGNGIIDVSYGADHGAAID------------STGKLFTWGLCDH 242

Query: 497 GQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGS 556
           G+LG    +    P  V    D     V CG   +  ++   +VF+ GS   GQLG    
Sbjct: 243 GRLGLKSGKDVPYPTRVDFLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQLGHVEK 302

Query: 557 TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
           + ++  R    + H  I  +A G  H+A +S   +VYTWG+G +GQLGHGD  +  TP
Sbjct: 303 SDEWLPRSVAALHHIPIVQVALGYEHMAALSLDGDVYTWGEGEHGQLGHGDLNSCSTP 360



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 81/158 (51%), Gaps = 8/158 (5%)

Query: 488 LFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
           LF WG     QLG G  +    P++V    ++ + I    V+ G     A+ +TG++F+ 
Sbjct: 180 LFAWGCSHNYQLGTGQYQAQPFPKLVSTLTRLGNGI--IDVSYGADHGAAIDSTGKLFTW 237

Query: 544 GSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
           G  D+G+LG   G    +PTR++  +K   I D+ CG Y  A +S   +V+TWG G+ GQ
Sbjct: 238 GLCDHGRLGLKSGKDVPYPTRVD-FLKDEVIVDVTCGMYSSACISHDMKVFTWGSGSKGQ 296

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           LGH +  ++  P  V AL    +  V  G    AA+ L
Sbjct: 297 LGHVEKSDEWLPRSVAALHHIPIVQVALGYEHMAALSL 334


>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 1063

 Score =  143 bits (360), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 159/335 (47%), Gaps = 26/335 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           ++ WG    G+LG G   E  V  P+ +D    +N+   ACG  HT  +T  G LYT G+
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62

Query: 375 GIHNLGLLGQVSEISHWIPRK---VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
             H     GQ+   ++ +P K       +E   ++ + CG  H+ A+T+ G+LF++G   
Sbjct: 63  NDH-----GQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNA 117

Query: 432 FGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            G LGH  D  S   PR ++++     V  SCG  H  A+             +S +LF 
Sbjct: 118 TGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALT------------NSGELFA 165

Query: 491 WGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
           WG    GQLG G    +V     VK    I    +ACG + + A++ +G +F  G   +G
Sbjct: 166 WGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFG 225

Query: 550 QLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           QLG      + +PT+++  ++   +  I+CG      ++ +  V+T G G  GQLGHG +
Sbjct: 226 QLGLNDLDSRCYPTQLK-TLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTH 284

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
            N+  P +V  L   ++  + CG   T A    +G
Sbjct: 285 GNEILPRMVFELMGSKITQIACGRKHTLAFVPSRG 319



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 91/280 (32%), Positives = 137/280 (48%), Gaps = 18/280 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           LY WG  +H    LG + E     PR++    +   +    CG  HT  +T  GKL+T G
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWS-QAANVQQAACGGSHTLLLTKDGKLYTCG 61

Query: 429 DGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           +   G LGH  +      P+ +  L+       SCG+ H+ A+                +
Sbjct: 62  NNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWG------------Q 109

Query: 488 LFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           LF+WG  A GQLGH  D      P  +K     +  +++CGHS  +ALT +G++F+ G+ 
Sbjct: 110 LFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGAN 169

Query: 547 DYGQLGSPGSTGK-FPT-RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
           +YGQLG  G+TGK  PT  +  ++    I  IACG  H   VS    ++ WGK   GQLG
Sbjct: 170 EYGQLGL-GTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 228

Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
             D +++  PT ++ LR   V+ + CG +F+  +    GV
Sbjct: 229 LNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGV 268



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 163/344 (47%), Gaps = 29/344 (8%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           ++ WG  + +G LG  + G+E         + P+ ++ +   + Q  ACG  H +L+TK 
Sbjct: 3   LYCWGSTV-HGELG--LGGIE-----EEQVMTPREMDWSQAANVQQAACGGSHTLLLTKD 54

Query: 315 GQIFSWGEGSGGKLGHGV-EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           G++++ G    G+LGH         P+ I AL    +  V+CG  H+ A+T  G L++WG
Sbjct: 55  GKLYTCGNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWG 114

Query: 374 DGIHNLGLLGQ-VSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
              +  G LG  +  +S+  PR +   +    +  I CG  H  A+T++G+LF +G   +
Sbjct: 115 S--NATGQLGHDLDMVSYPAPRMIKS-IATKTVVQISCGHSHCLALTNSGELFAWGANEY 171

Query: 433 GALGHGDRSSTSVPRE--VETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
           G LG G  +   VP    V++L  +     +CG  H+ A+ +            S  +F 
Sbjct: 172 GQLGLG-TTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSK------------SGAIFG 218

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG    GQLG  D + R  P  +K    +    ++CG   ++ LT  G VF+ G   +GQ
Sbjct: 219 WGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQ 278

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVY 593
           LG      +   R+   +    I  IACG  H +A V S+ +VY
Sbjct: 279 LGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 106/226 (46%), Gaps = 13/226 (5%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG     G LG  ++ V   +        P++++S        I+CG  H + +T
Sbjct: 108 GQLFSWGSN-ATGQLGHDLDMVSYPA--------PRMIKSIATKTVVQISCGHSHCLALT 158

Query: 313 KQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             G++F+WG    G+LG G     V    L+ +L G  I  +ACG  H+ AV+ SG ++ 
Sbjct: 159 NSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFG 218

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   +  G LG     S   P ++   +  L +  I CG   +  +T  G +FT G GT
Sbjct: 219 WGK--NTFGQLGLNDLDSRCYPTQLK-TLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGT 275

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           FG LGHG   +  +PR V  L   K    +CG  HT A V   GK 
Sbjct: 276 FGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKV 321



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 11/119 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG+    G LG       ++  D R    P  L++   L  + I+CG   +V +T
Sbjct: 214 GAIFGWGKN-TFGQLG-------LNDLDSR--CYPTQLKTLRSLGVRYISCGDDFSVFLT 263

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS-GDLY 370
           ++G +F+ G G+ G+LGHG   +   P+++  L GS I  +ACG  HT A   S G +Y
Sbjct: 264 QEGGVFTCGLGTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322


>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
          Length = 1042

 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 176/366 (48%), Gaps = 28/366 (7%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           +F WG  + +G LG  + G+E           PK L+          A G+ H + +TK 
Sbjct: 1   MFGWGSTI-HGELG--LGGIE-----EEHVFTPKALDWFEAKSVMKAALGANHTLFLTKD 52

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           G+++S G    G+LGH  +     P+L+  L+  +I  VACGE H+ A++  G++++WG 
Sbjct: 53  GKVYSCGSNDYGQLGH--DQPRKRPQLVSGLDAYSIINVACGEMHSLALSRWGEVFSWGS 110

Query: 375 GIHNLGLLG-QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
              N G LG Q+      +P+ +   +   Q+  I  G  H+ A+T+AG++F +G   FG
Sbjct: 111 D--NYGQLGHQLGGTLQIVPKLIKS-LAKYQVVQIAAGQRHSVALTNAGEIFVWGANDFG 167

Query: 434 ALGHGDRSST-SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            LG G  +   S P  V +L  +   + +CG  HT A+ +            S  +F WG
Sbjct: 168 QLGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSK------------SGAVFGWG 215

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
               GQLG  D   +  P  ++   +     ++CG   +  LT  G VFS G+  YGQLG
Sbjct: 216 KNINGQLGLNDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLG 275

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENK 611
             G++ +   R    +    I  I+CG  H +A V S+  VY++G G  GQLG     N 
Sbjct: 276 HGGTSNEILPRQVLELMGSTITQISCGRQHSLAFVPSRGRVYSYGLGGAGQLGLRKPSNA 335

Query: 612 QTPTLV 617
            TP +V
Sbjct: 336 STPQVV 341



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 157/336 (46%), Gaps = 31/336 (9%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +F WG    G+LG G   E  V  PK +D     ++   A G  HT  +T  G +Y+ G 
Sbjct: 1   MFGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGS 60

Query: 375 GIHNLGLLGQVSEISHWIPRK----VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
             ++ G LG      H  PRK    VSG ++   I ++ CG  H+ A++  G++F++G  
Sbjct: 61  --NDYGQLG------HDQPRKRPQLVSG-LDAYSIINVACGEMHSLALSRWGEVFSWGSD 111

Query: 431 TFGALGHGDRSSTS-VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
            +G LGH    +   VP+ +++L + + V  + G  H+ A+             ++ ++F
Sbjct: 112 NYGQLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALT------------NAGEIF 159

Query: 490 TWGDGAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            WG    GQLG G   P    P  V     I F  +ACG + T A++ +G VF  G    
Sbjct: 160 VWGANDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKNIN 219

Query: 549 GQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
           GQLG   +  K FPT++   +++  +  I+CG      ++    V++ G G  GQLGHG 
Sbjct: 220 GQLGLNDTVSKKFPTQLR-TLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGG 278

Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
             N+  P  V  L    +  + CG   + A    +G
Sbjct: 279 TSNEILPRQVLELMGSTITQISCGRQHSLAFVPSRG 314



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 128/280 (45%), Gaps = 21/280 (7%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           ++ WG  IH    LG + E  H    K     E   +     G  HT  +T  GK+++ G
Sbjct: 1   MFGWGSTIHGELGLGGIEE-EHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
              +G LGH        P+ V  L     +  +CG  H+ A+                ++
Sbjct: 60  SNDYGQLGHDQPRKR--PQLVSGLDAYSIINVACGEMHSLALSRWG------------EV 105

Query: 489 FTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           F+WG    GQLGH      ++VP  +K        ++A G   ++ALT  G++F  G+ D
Sbjct: 106 FSWGSDNYGQLGHQLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGAND 165

Query: 548 YGQLGSPGSTGKF---PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
           +GQLG  G+   +   PT +  ++       IACG+ H   VS    V+ WGK  NGQLG
Sbjct: 166 FGQLGL-GTITPYESTPTTV-CSLSGIPFALIACGANHTFAVSKSGAVFGWGKNINGQLG 223

Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
             D  +K+ PT +  LR+ +V+ + CG  F+  + L  GV
Sbjct: 224 LNDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFLTLDGGV 263



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 15/199 (7%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++F+WG      L  G +   E +         P  + S   +    IACG+ H   V+
Sbjct: 156 GEIFVWGANDFGQLGLGTITPYEST---------PTTVCSLSGIPFALIACGANHTFAVS 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K G +F WG+   G+LG        +P  +  L  S +  ++CG+  +  +TL G +++ 
Sbjct: 207 KSGAVFGWGKNINGQLGLNDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSC 266

Query: 373 GDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDG 430
           G G++  LG  G  +EI   +PR+V  ++ G  I+ I CG  H+ A + S G+++++G G
Sbjct: 267 GAGMYGQLGHGGTSNEI---LPRQVL-ELMGSTITQISCGRQHSLAFVPSRGRVYSYGLG 322

Query: 431 TFGALGHGDRSSTSVPREV 449
             G LG    S+ S P+ V
Sbjct: 323 GAGQLGLRKPSNASTPQVV 341


>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
           PN500]
          Length = 1626

 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 162/324 (50%), Gaps = 27/324 (8%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           +  G+ H  ++++ G++F+WGEG  G+LGHG E  +S PK + AL    +  V CG   T
Sbjct: 134 VNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGGRST 193

Query: 361 CAV--TLSGDLYTWGDGIHNLGLLGQ--VSEISHWIPRKVSGQMEGLQ-ISSICCGPWHT 415
            A+  T    LYTWG+  +  G LG+    +    +P  V+  + G + + ++  G    
Sbjct: 194 IALSHTAGSGLYTWGN--NEFGQLGRGDCGDDFTCLPESVA--VPGAKRLVALDAGASRA 249

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A I S+G LFT+G G  G LGHGD  +   P  V +L     V  + G  H+ A+ +   
Sbjct: 250 AVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLALTKAG- 308

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAE-PRVVPLCVKVSDDI-SFCKVACGHSITIA 533
                      +LF+WG G  GQLGHG  +  ++ P  ++   D+     ++ G   ++A
Sbjct: 309 -----------ELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVA 357

Query: 534 LTATGQVFSMGSADYGQLGSPGSTG---KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
               G V++ G +DYG LG+  S       P RI      R+ + I+CG  H   ++S +
Sbjct: 358 QLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGIRF-KTISCGFQHTVALTSDN 416

Query: 591 EVYTWGKGANGQLGHGDNENKQTP 614
            +Y+WG G  G+LG  + +N+  P
Sbjct: 417 TIYSWGCGLGGRLGTFNEKNQCAP 440



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 127/301 (42%), Gaps = 56/301 (18%)

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
           +I  +  G  H A I+ +GKLFT+G+G +G LGHGD  S S P++V  L  +      CG
Sbjct: 130 RIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCG 189

Query: 464 VWHTAAIVEVAGK---TSGSNGL------------------------------------- 483
              T A+   AG    T G+N                                       
Sbjct: 190 GRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKRLVALDAGASRA 249

Query: 484 ----SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
               SS  LFTWG G  G+LGHGD E R  P  V          VA G   ++ALT  G+
Sbjct: 250 AVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLALTKAGE 309

Query: 540 VFSMGSADYGQL--GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
           +FS G  + GQL  GS  S    P +++  +    I  I+ G YH         VY WG 
Sbjct: 310 LFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSVAQLDDGSVYAWGM 369

Query: 598 GANGQLGHGDNENK--QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICS-G 654
              G LG GD+++     P  +   R  + K++ CG   T A+        +D++I S G
Sbjct: 370 SDYGILGTGDSDDGAINIPQRILMPRGIRFKTISCGFQHTVALT-------SDNTIYSWG 422

Query: 655 C 655
           C
Sbjct: 423 C 423



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 113/227 (49%), Gaps = 22/227 (9%)

Query: 294 VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMV 353
           V LDA     G+  A ++   G +F+WG G  G+LGHG   +   P L+ +L G  +  V
Sbjct: 240 VALDA-----GASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAV 294

Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI-PRKVSGQMEGLQISSICCGP 412
           A G  H+ A+T +G+L++WG G +  G LG  S  S  + P+++   ++  +I  I  G 
Sbjct: 295 ALGGGHSLALTKAGELFSWGRGEN--GQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGG 352

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRS--STSVPREVETLKELKTVMASCGVWHTAAI 470
           +H+ A    G ++ +G   +G LG GD    + ++P+ +   + ++    SCG  HT A+
Sbjct: 353 YHSVAQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGIRFKTISCGFQHTVAL 412

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
                        S   +++WG G  G+LG  + + +  P+   + +
Sbjct: 413 T------------SDNTIYSWGCGLGGRLGTFNEKNQCAPIACNIPN 447



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 94/191 (49%), Gaps = 18/191 (9%)

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
           E + ++ + G  H A I +            S KLFTWG+G  G+LGHGD E    P  V
Sbjct: 128 EERIILVNAGAAHIAMISQ------------SGKLFTWGEGQYGRLGHGDEESISTPKQV 175

Query: 514 KVSDDISFCKVACGHSITIAL--TATGQVFSMGSADYGQLGSPGSTGKF---PTRIEGNI 568
               +I    V CG   TIAL  TA   +++ G+ ++GQLG       F   P  +    
Sbjct: 176 VALANIPMKYVFCGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVPG 235

Query: 569 KHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSV 628
             R +  +  G+   AV+ S   ++TWG+G +G+LGHGD EN+  PTLV +L    V +V
Sbjct: 236 AKRLVA-LDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAV 294

Query: 629 VCGSNFTAAIC 639
             G   + A+ 
Sbjct: 295 ALGGGHSLALT 305


>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC6-like [Ailuropoda melanoleuca]
          Length = 1189

 Score =  142 bits (358), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 173/345 (50%), Gaps = 30/345 (8%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGH-GVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           A G +H++L+   G++ S G+ S G+LG  GV+ D  +PK I  L+   + +V+CG+ H+
Sbjct: 29  ASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRD-EHPKRIRTLDNLRVDLVSCGKEHS 87

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            AV   G ++ WG G      +G+  EI + IP K+   + G++I  + CG +H+ A++ 
Sbjct: 88  LAVCYKGRVFAWGAGSEGQLGVGEFKEI-NLIPTKIK-TLTGIKIIQVSCGHYHSLALSE 145

Query: 421 AGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
            G++F++G  + G LG G    S + P+ V +L  +     + G  H+ A+       SG
Sbjct: 146 GGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFAL-----SLSG 200

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVV---PLCVKVSDDISFCKVACGHSITIALTA 536
           ++       F WG    GQL        V    P  +    ++    ++CG+  T  LT 
Sbjct: 201 AS-------FGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISCGYEHTAVLTQ 253

Query: 537 TGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
           TG+VF+ G   YGQLG SP +  + P  +EG      +  I CGSYH +A V +  +V +
Sbjct: 254 TGKVFTFGGNSYGQLGHSPTAEKEGPQLVEG--IDGLVSQIDCGSYHTLAYVYTTGKVVS 311

Query: 595 WGKGANGQ------LGHGDNENKQTPTLVEALRDKQVKSVVCGSN 633
           +G+G + +          +N +  +P     L D QVK +  G++
Sbjct: 312 FGRGPSCKSSPTHPKALTENVDFTSPISANDLVDFQVKHIFAGTH 356



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 156/304 (51%), Gaps = 25/304 (8%)

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
           G+ +   A GE H+  +  +G+L++ GD  ++ G LG+        P+++   ++ L++ 
Sbjct: 22  GAELRQAASGERHSLLLLSNGELHSCGD--NSQGQLGRKGVQRDEHPKRIR-TLDNLRVD 78

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGD-RSSTSVPREVETLKELKTVMASCGVW 465
            + CG  H+ A+   G++F +G G+ G LG G+ +    +P +++TL  +K +  SCG +
Sbjct: 79  LVSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTLTGIKIIQVSCGHY 138

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP-RVVPLCVKVSDDISFCKV 524
           H+ A+ E              ++F+WG  + GQLG G   P +  P  V+  D I   +V
Sbjct: 139 HSLALSE------------GGQVFSWGSNSHGQLGLGKECPSQASPQRVRSLDGIPLTQV 186

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLG-----SPGSTGKFPTRIEGNIKHRYIEDIACG 579
           A G + + AL+ +G  F  GS + GQL       P  + K P  I G +K+  +  I+CG
Sbjct: 187 AAGGAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHK-PRSI-GALKNLGVIYISCG 244

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
             H AV++   +V+T+G  + GQLGH     K+ P LVE + D  V  + CGS  T A  
Sbjct: 245 YEHTAVLTQTGKVFTFGGNSYGQLGHSPTAEKEGPQLVEGI-DGLVSQIDCGSYHTLAYV 303

Query: 640 LHKG 643
              G
Sbjct: 304 YTTG 307



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 18/263 (6%)

Query: 217 DDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEI 276
           D+   R  T D+ R+ L S     S   C++     G VF WG G    L  G    +  
Sbjct: 63  DEHPKRIRTLDNLRVDLVSCGKEHSLAVCYK-----GRVFAWGAGSEGQLGVGEFKEIN- 116

Query: 277 SSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-AD 335
                   L+P  +++   +    ++CG  H++ +++ GQ+FSWG  S G+LG G E   
Sbjct: 117 --------LIPTKIKTLTGIKIIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPS 168

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
            + P+ + +L+G  +  VA G  H+ A++LSG  + WG +    L L      +    PR
Sbjct: 169 QASPQRVRSLDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPR 228

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
            + G ++ L +  I CG  HTA +T  GK+FTFG  ++G LGH   +    P+ VE +  
Sbjct: 229 SI-GALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLGHSPTAEKEGPQLVEGIDG 287

Query: 455 LKTVMASCGVWHTAAIVEVAGKT 477
           L + +  CG +HT A V   GK 
Sbjct: 288 LVSQI-DCGSYHTLAYVYTTGKV 309



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 113/254 (44%), Gaps = 23/254 (9%)

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
           PR+      G ++     G  H+  + S G+L + GD + G LG         P+ + TL
Sbjct: 13  PRRRQAGXAGAELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPKRIRTL 72

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVPL 511
             L+  + SCG  H+ A+                ++F WG G+EGQLG G+  E  ++P 
Sbjct: 73  DNLRVDLVSCGKEHSLAVC------------YKGRVFAWGAGSEGQLGVGEFKEINLIPT 120

Query: 512 CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG----SPGSTGKFPTRIEGN 567
            +K    I   +V+CGH  ++AL+  GQVFS GS  +GQLG     P      P R+  +
Sbjct: 121 KIKTLTGIKIIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQAS--PQRVR-S 177

Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE---NKQTPTLVEALRDKQ 624
           +    +  +A G  H   +S     + WG    GQL    N        P  + AL++  
Sbjct: 178 LDGIPLTQVAAGGAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLG 237

Query: 625 VKSVVCGSNFTAAI 638
           V  + CG   TA +
Sbjct: 238 VIYISCGYEHTAVL 251


>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
           Nc14]
          Length = 554

 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 170/377 (45%), Gaps = 35/377 (9%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           E+   D  D  LP  +     +    +ACG++    + + G +F+ G    G+ G G  +
Sbjct: 23  ELCHNDTVDRTLPTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDSGQCGIGSTS 82

Query: 335 DVSYPKLIDALNGSNIHMV--ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI 392
            V   +L+ AL   +I  +  A G  H  A++ SG LYT+G   ++ G LG  S      
Sbjct: 83  RVQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFG--FNSRGQLGHGSTNPITT 140

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
           P K+   +    +  + C  +HT  +T  G L+ FG    G LG  D     VP  +   
Sbjct: 141 PTKIK-DLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDRHVPVPLTYF 199

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG-----DAEPR 507
                +  +CG  HT               L++  +  +G    GQLG G      A P 
Sbjct: 200 NSRPVLAVACGQHHTVV------------SLTNGGVVAFGKNDHGQLGTGYTLDYHASPS 247

Query: 508 VV--PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTR 563
           ++  PL     D +    +ACG+  TIAL   G V+S G  DYGQLG  G       PT 
Sbjct: 248 LLAAPL-----DSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGH-GHRHHLSEPTL 301

Query: 564 IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDK 623
           I+   K   ++ + CG YH  V+S   +VY +G+  +GQLG G+  +  +P ++ +LRDK
Sbjct: 302 IKALAKTHAVQ-VTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTSPQIIASLRDK 360

Query: 624 QVKSVVCGSNFTAAICL 640
            V  V   S F  +ICL
Sbjct: 361 FVVKV--ASGFYHSICL 375



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 147/326 (45%), Gaps = 21/326 (6%)

Query: 318 FSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH 377
           +S+G+ S G+L H    D + P  I   +   I  VACG   T  +  +GD++T G    
Sbjct: 14  YSFGQNSYGELCHNDTVDRTLPTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDS 73

Query: 378 NLGLLGQVSEIS--HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
               +G  S +     +P  V+  +  ++ ++ C    H  AI+ +G L+TFG  + G L
Sbjct: 74  GQCGIGSTSRVQSLRLVPALVTEDIAHIRSANGC---EHLTAISRSGALYTFGFNSRGQL 130

Query: 436 GHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGA 495
           GHG  +  + P +++ L     V  +C  +HT  +                 L+ +G   
Sbjct: 131 GHGSTNPITTPTKIKDLASYHVVEVACSYFHTIVMT------------MEGTLYAFGRND 178

Query: 496 EGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG 555
            GQLG  D   R VP+ +   +      VACG   T+     G V + G  D+GQLG+ G
Sbjct: 179 LGQLGIDDGMDRHVPVPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGT-G 237

Query: 556 STGKF---PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
            T  +   P+ +   +    +  +ACG YH   ++    VY++G+   GQLGHG   +  
Sbjct: 238 YTLDYHASPSLLAAPLDSLVVPSLACGYYHTIALAEHGSVYSFGRNDYGQLGHGHRHHLS 297

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            PTL++AL       V CG   T  +
Sbjct: 298 EPTLIKALAKTHAVQVTCGCYHTLVL 323



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 149/327 (45%), Gaps = 32/327 (9%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSI--ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
           I S  R  +L  +++ + V  D   I  A G +H   +++ G ++++G  S G+LGHG  
Sbjct: 78  IGSTSRVQSL--RLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLGHGST 135

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
             ++ P  I  L   ++  VAC  FHT  +T+ G LY +G   ++LG LG    +   +P
Sbjct: 136 NPITTPTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGR--NDLGQLGIDDGMDRHVP 193

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG-------HGDRSSTSVP 446
             ++       + ++ CG  HT    + G +  FG    G LG       H   S  + P
Sbjct: 194 VPLT-YFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSLLAAP 252

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP 506
                L  L     +CG +HT A+ E      GS       ++++G    GQLGHG    
Sbjct: 253 -----LDSLVVPSLACGYYHTIALAE-----HGS-------VYSFGRNDYGQLGHGHRHH 295

Query: 507 RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEG 566
              P  +K        +V CG   T+ L+  G+V+  G  ++GQLG          +I  
Sbjct: 296 LSEPTLIKALAKTHAVQVTCGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTSPQIIA 355

Query: 567 NIKHRYIEDIACGSYH-IAVVSSKSEV 592
           +++ +++  +A G YH I + ++K+ V
Sbjct: 356 SLRDKFVVKVASGFYHSICLTATKNSV 382



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 22/226 (9%)

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           ++FG  ++G L H D    ++P  +     +K +  +CG   TA + E            
Sbjct: 14  YSFGQNSYGELCHNDTVDRTLPTPISFCHNVKILDVACGNEQTAFLFE------------ 61

Query: 485 SKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
           +  +FT G    GQ G G        R+VP    V++DI+  + A G     A++ +G +
Sbjct: 62  TGDVFTCGYNDSGQCGIGSTSRVQSLRLVP--ALVTEDIAHIRSANGCEHLTAISRSGAL 119

Query: 541 FSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           ++ G    GQLG  GST     PT+I+ ++   ++ ++AC  +H  V++ +  +Y +G+ 
Sbjct: 120 YTFGFNSRGQLGH-GSTNPITTPTKIK-DLASYHVVEVACSYFHTIVMTMEGTLYAFGRN 177

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
             GQLG  D  ++  P  +     + V +V CG + T     + GV
Sbjct: 178 DLGQLGIDDGMDRHVPVPLTYFNSRPVLAVACGQHHTVVSLTNGGV 223


>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
          Length = 1046

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 162/327 (49%), Gaps = 22/327 (6%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + +ACG++H++ +   G +++ G  S G+LGH  +   S P+L+ AL+   I  V+CG+ 
Sbjct: 37  KEVACGNQHSLFLLHDGSVYTCGSNSCGQLGH--DKGGSRPELVGALDAQKISGVSCGQA 94

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
           H+ AV   G ++ WG G      LG   E    +PR +    E  +IS + CG  H  A+
Sbjct: 95  HSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVR-VPRLIKKLCEH-RISQVMCGNHHCIAL 152

Query: 419 TSAGKLFTFGDGTFGALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +  G+LF +G+ + G LG G    ST  P+ +++L         CG+     + +++   
Sbjct: 153 SKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSL---------CGI----PLTQISAGG 199

Query: 478 SGSNGLS-SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
             S  LS S  +F WG  + GQLG  D + R VP  +K         ++CG   T ALT 
Sbjct: 200 DHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTK 259

Query: 537 TGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
            G +F+ G+   GQLG   +  +  P R+   +    +  IACG  H +A V S   +Y 
Sbjct: 260 EGGLFTFGNGSKGQLGHDSTRNEPLPRRVM-ELMGTEVSQIACGRNHTLAFVPSTGLIYA 318

Query: 595 WGKGANGQLGHGDNENKQTPTLVEALR 621
           +G    GQLG G   + ++P  V  ++
Sbjct: 319 FGCNTQGQLGTGIRGSAKSPVPVSNIQ 345



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/265 (35%), Positives = 140/265 (52%), Gaps = 23/265 (8%)

Query: 296 LDAQSIA---CGSKHAVLVTKQGQIFSWGEGSGGKLGHGV-EADVSYPKLIDALNGSNIH 351
           LDAQ I+   CG  H++ V +QGQ+F+WG G GG+LG G  E  V  P+LI  L    I 
Sbjct: 81  LDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRIS 140

Query: 352 MVACGEFHTCAVTLSGDLYTWGDGIH-NLGL-LGQVSEISHWIPRKVSGQMEGLQISSIC 409
            V CG  H  A++  G L+ WG+     LGL  G+ S +S   P+ +   + G+ ++ I 
Sbjct: 141 QVMCGNHHCIALSKDGQLFVWGENSSGQLGLGKGEPSTLS---PQPLK-SLCGIPLTQIS 196

Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA 469
            G  H+ A++ +G +F +G  + G LG  D    +VP  ++ L+  K V  SCG  HTAA
Sbjct: 197 AGGDHSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAA 256

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHS 529
           + +  G            LFT+G+G++GQLGH       +P  V         ++ACG +
Sbjct: 257 LTKEGG------------LFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRN 304

Query: 530 ITIALT-ATGQVFSMGSADYGQLGS 553
            T+A   +TG +++ G    GQLG+
Sbjct: 305 HTLAFVPSTGLIYAFGCNTQGQLGT 329



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 159/347 (45%), Gaps = 27/347 (7%)

Query: 316 QIFSWGEGSGGKLGHGV-EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
            +  WG    G+LG G  EA V  P+     +G  +  VACG  H+  +   G +YT G 
Sbjct: 1   MMLCWGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGS 60

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++ G LG     S   P  V G ++  +IS + CG  H+ A+   G++F +G G  G 
Sbjct: 61  --NSCGQLGHDKGGSR--PELV-GALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQ 115

Query: 435 LGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG G    +  VPR ++ L E +     CG  H  A+ +              +LF WG+
Sbjct: 116 LGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSK------------DGQLFVWGE 163

Query: 494 GAEGQLGHGDAEPRVV-PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            + GQLG G  EP  + P  +K    I   +++ G   + AL+ +G VF  G    GQLG
Sbjct: 164 NSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLG 223

Query: 553 SPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
                 +  P  I+  ++ + +  I+CG  H A ++ +  ++T+G G+ GQLGH    N+
Sbjct: 224 LNDEQDRAVPCHIK-FLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNE 282

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQ 658
             P  V  L   +V  + CG N T A     G+  A      GC  Q
Sbjct: 283 PLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYA-----FGCNTQ 324



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 123/252 (48%), Gaps = 26/252 (10%)

Query: 253 GDVFIWGEGLGNGL-LGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           G VF WG G G  L LG A   V +          P++++         + CG+ H + +
Sbjct: 103 GQVFAWGAGDGGQLGLGTAEEAVRV----------PRLIKKLCEHRISQVMCGNHHCIAL 152

Query: 312 TKQGQIFSWGEGSGGKLGHGV-EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           +K GQ+F WGE S G+LG G  E     P+ + +L G  +  ++ G  H+ A++ SG ++
Sbjct: 153 SKDGQLFVWGENSSGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSFSGAVF 212

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            WG   ++ G LG   E    +P  +   +   ++  I CG  HTAA+T  G LFTFG+G
Sbjct: 213 GWGK--NSAGQLGLNDEQDRAVPCHIKF-LRSQKVVYISCGEEHTAALTKEGGLFTFGNG 269

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
           + G LGH    +  +PR V  L   +    +CG  HT A V        S GL    ++ 
Sbjct: 270 SKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVP-------STGL----IYA 318

Query: 491 WGDGAEGQLGHG 502
           +G   +GQLG G
Sbjct: 319 FGCNTQGQLGTG 330



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 103/210 (49%), Gaps = 25/210 (11%)

Query: 253 GDVFIWGE------GLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSK 306
           G +F+WGE      GLG G                   L P+ L+S   +    I+ G  
Sbjct: 156 GQLFVWGENSSGQLGLGKG---------------EPSTLSPQPLKSLCGIPLTQISAGGD 200

Query: 307 HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
           H+  ++  G +F WG+ S G+LG   E D + P  I  L    +  ++CGE HT A+T  
Sbjct: 201 HSFALSFSGAVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKE 260

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLF 425
           G L+T+G+G  + G LG  S  +  +PR+V  ++ G ++S I CG  HT A + S G ++
Sbjct: 261 GGLFTFGNG--SKGQLGHDSTRNEPLPRRVM-ELMGTEVSQIACGRNHTLAFVPSTGLIY 317

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKEL 455
            FG  T G LG G R S   P  V  ++ L
Sbjct: 318 AFGCNTQGQLGTGIRGSAKSPVPVSNIQPL 347


>gi|60097906|ref|NP_080268.1| E3 ISG15--protein ligase Herc6 [Mus musculus]
 gi|403399416|sp|F2Z461.1|HERC6_MOUSE RecName: Full=E3 ISG15--protein ligase Herc6
          Length = 1003

 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 175/344 (50%), Gaps = 28/344 (8%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G  H++L+    +++S G+ S G+LG   +     P+ I ALN  ++ +V+CG+ H+ 
Sbjct: 28  ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSV 87

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV   G ++ WG G      +G+  EIS ++P K+   + G++I  + CG +H+ A++  
Sbjct: 88  AVCHKGKVFAWGAGSEGQLGIGEFKEIS-FMPTKIKA-LAGIKIIQVSCGHYHSLALSED 145

Query: 422 GKLFTFGDGTFGALGHGDRS-STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           G +F++G  + G LG G  S S ++P++V++L+ +     + G  H+ A+       +G+
Sbjct: 146 GHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL-----SLTGT 200

Query: 481 NGLSSKKLFTWGDGAEGQL---GHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
           +       F WG    GQL   G+   E    P  +    ++S   ++CG+  T  LT  
Sbjct: 201 S-------FGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEE 253

Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTW 595
           GQVF+ G    GQL  SP S  + P  IEG I  R +  I C SYH IA V +  +V + 
Sbjct: 254 GQVFTFGGNSSGQLQPSPRSGQRGPQLIEG-IGGR-VSQIECASYHTIAYVYTTGQVVSL 311

Query: 596 GKG----ANGQLGHGDNENKQTPTLV--EALRDKQVKSVVCGSN 633
           G+G    +N        EN     L+  E L D +VK +  G++
Sbjct: 312 GRGPSHTSNPTHQEAPAENSDITCLLAAEDLVDIEVKDIFAGAH 355



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 132/263 (50%), Gaps = 20/263 (7%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDAL 345
           P+ +++   L    ++CG +H+V V  +G++F+WG GS G+LG G   ++S+ P  I AL
Sbjct: 65  PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL 124

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
            G  I  V+CG +H+ A++  G +++WG        LG+ S  S  IP+KV   +EG+ +
Sbjct: 125 AGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSR-SQAIPQKVKS-LEGIPL 182

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGAL---GHGDRSSTSVPREVETLKELKTVMASC 462
           + +  G  H+ A++  G  F +G    G L   G+  +     P  +  LK L  +  SC
Sbjct: 183 AQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISC 242

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK-VSDDISF 521
           G  HTA + E              ++FT+G  + GQL       +  P  ++ +   +S 
Sbjct: 243 GYEHTAVLTE------------EGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQ 290

Query: 522 CKVACGHSITIALTATGQVFSMG 544
            + A  H+I    T TGQV S+G
Sbjct: 291 IECASYHTIAYVYT-TGQVVSLG 312



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 119/252 (47%), Gaps = 19/252 (7%)

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
           PR++     G+++     G  H+  + S  ++++ GD ++G LG     ST  P  ++ L
Sbjct: 12  PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVPL 511
            +L   + SCG  H+ A+                K+F WG G+EGQLG G+  E   +P 
Sbjct: 72  NDLHVDLVSCGKEHSVAVCH------------KGKVFAWGAGSEGQLGIGEFKEISFMPT 119

Query: 512 CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ--LGSPGSTGKFPTRIEGNIK 569
            +K    I   +V+CGH  ++AL+  G VFS G    GQ  LG    +   P +++ +++
Sbjct: 120 KIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVK-SLE 178

Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQT---PTLVEALRDKQVK 626
              +  +A G  H   +S     + WG   +GQL    N+ K+    P  + AL++  V 
Sbjct: 179 GIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVI 238

Query: 627 SVVCGSNFTAAI 638
            + CG   TA +
Sbjct: 239 YISCGYEHTAVL 250



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 117/253 (46%), Gaps = 18/253 (7%)

Query: 227 DSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALL 286
           +   + L S     S   CH+     G VF WG G   G LG      EIS        +
Sbjct: 72  NDLHVDLVSCGKEHSVAVCHK-----GKVFAWGAG-SEGQLGIG-EFKEIS-------FM 117

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDAL 345
           P  +++   +    ++CG  H++ +++ G +FSWG  S G+LG G  +   + P+ + +L
Sbjct: 118 PTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL 177

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQ 404
            G  +  VA G  H+ A++L+G  + WG      L L G   +   + P  + G ++ L 
Sbjct: 178 EGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSI-GALKNLS 236

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +  I CG  HTA +T  G++FTFG  + G L    RS    P+ +E +   +     C  
Sbjct: 237 VIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECAS 295

Query: 465 WHTAAIVEVAGKT 477
           +HT A V   G+ 
Sbjct: 296 YHTIAYVYTTGQV 308



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 1/87 (1%)

Query: 561 PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           P R++       +   A G +H  ++ S   VY+ G  + GQLG   +++ + P  ++AL
Sbjct: 12  PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71

Query: 621 RDKQVKSVVCGSNFTAAICLHKGVSIA 647
            D  V  V CG   + A+C HKG   A
Sbjct: 72  NDLHVDLVSCGKEHSVAVC-HKGKVFA 97



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 2/81 (2%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
           L    I+CG +H  ++T++GQ+F++G  S G+L     +    P+LI+ + G  +  + C
Sbjct: 235 LSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGG-RVSQIEC 293

Query: 356 GEFHTCA-VTLSGDLYTWGDG 375
             +HT A V  +G + + G G
Sbjct: 294 ASYHTIAYVYTTGQVVSLGRG 314


>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
 gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
          Length = 1058

 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 157/323 (48%), Gaps = 20/323 (6%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + +ACG +H + +T  G++++ G     +LGH +      P LI  L    +  +ACG  
Sbjct: 43  KQVACGHRHTLFLTSSGRVYACGSNDHSQLGHDLPT--KRPLLIPELLDYVVVQIACGSR 100

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
           H+ A++  G + +WGD  ++ G LGQ ++       K+  Q+    +  I CG  H+ A+
Sbjct: 101 HSMALSEWGQVLSWGD--NDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLAL 158

Query: 419 TSAGKLFTFGDGTFGALGHG---DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           TS G+L+++G   +G LG     + + ++ P  + TL  +     +CG  H+  I +   
Sbjct: 159 TSCGELYSWGSNIYGQLGVNTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISK--- 215

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
                    S  +F WG    GQLG  D   R  P  +K    +    VACG   ++ LT
Sbjct: 216 ---------SSAVFGWGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEFSVFLT 266

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
             G VF+ G+  YGQLG      +   R+   +    I  +ACG+ H +A+V S+  VY 
Sbjct: 267 NEGGVFTCGAGAYGQLGHGFGANEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYG 326

Query: 595 WGKGANGQLGHGDNENKQTPTLV 617
           +G G++GQLG    ++   P +V
Sbjct: 327 FGLGSSGQLGTRSTKSLTLPQVV 349



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 158/348 (45%), Gaps = 41/348 (11%)

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEAD--VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           +T   +++ WG  S G+LG G   D  +  P  +     S I  VACG  HT  +T SG 
Sbjct: 1   MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGR 60

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRK---VSGQMEGLQISSICCGPWHTAAITSAGKLF 425
           +Y  G   H        S++ H +P K   +  ++    +  I CG  H+ A++  G++ 
Sbjct: 61  VYACGSNDH--------SQLGHDLPTKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVL 112

Query: 426 TFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           ++GD   G LG   D+    +P+ V  L     V  +CG  H+ A+             S
Sbjct: 113 SWGDNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALT------------S 160

Query: 485 SKKLFTWGDGAEGQLG--------HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
             +L++WG    GQLG        H +   R+  L       I    +ACG + +  ++ 
Sbjct: 161 CGELYSWGSNIYGQLGVNTPKEVTHSNQPVRLTTLL-----GIPVAAIACGGNHSFIISK 215

Query: 537 TGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
           +  VF  G  + GQLG    T + +PT+++  ++   +  +ACG      ++++  V+T 
Sbjct: 216 SSAVFGWGRNNCGQLGLNDETSRSYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTC 274

Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
           G GA GQLGHG   N+  P +V  L    +  V CG+  T A+   +G
Sbjct: 275 GAGAYGQLGHGFGANEMLPRMVMELMGSTITQVACGNRHTLALVPSRG 322



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 135/287 (47%), Gaps = 21/287 (7%)

Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
           +T   +LY WG+  H    LG + +     P +V    +   I  + CG  HT  +TS+G
Sbjct: 1   MTAGTELYCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDS-AIKQVACGHRHTLFLTSSG 59

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           +++  G      LGH     T  P  +  L +   V  +CG  H+ A+ E          
Sbjct: 60  RVYACGSNDHSQLGHD--LPTKRPLLIPELLDYVVVQIACGSRHSMALSEWG-------- 109

Query: 483 LSSKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
               ++ +WGD   GQLG   D +   +P  V+     +  ++ACG++ ++ALT+ G+++
Sbjct: 110 ----QVLSWGDNDCGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSCGELY 165

Query: 542 SMGSADYGQLG--SPGST--GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
           S GS  YGQLG  +P        P R+   +    +  IACG  H  ++S  S V+ WG+
Sbjct: 166 SWGSNIYGQLGVNTPKEVTHSNQPVRLT-TLLGIPVAAIACGGNHSFIISKSSAVFGWGR 224

Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
              GQLG  D  ++  PT ++ LR   V+ V CG  F+  +    GV
Sbjct: 225 NNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 271



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 11/198 (5%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+++ WG  +   L  G     E++ +++     P  L + + +   +IACG  H+ +++
Sbjct: 162 GELYSWGSNIYGQL--GVNTPKEVTHSNQ-----PVRLTTLLGIPVAAIACGGNHSFIIS 214

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K   +F WG  + G+LG   E   SYP  +  L    +  VACG+  +  +T  G ++T 
Sbjct: 215 KSSAVFGWGRNNCGQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTC 274

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTFGDGT 431
           G G +  G LG     +  +PR V  ++ G  I+ + CG  HT A+  S G+++ FG G+
Sbjct: 275 GAGAY--GQLGHGFGANEMLPRMVM-ELMGSTITQVACGNRHTLALVPSRGRVYGFGLGS 331

Query: 432 FGALGHGDRSSTSVPREV 449
            G LG     S ++P+ V
Sbjct: 332 SGQLGTRSTKSLTLPQVV 349



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 65/113 (57%), Gaps = 3/113 (2%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P  L++   L  + +ACG + +V +T +G +F+ G G+ G+LGHG  A+   P+++  L 
Sbjct: 241 PTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFGANEMLPRMVMELM 300

Query: 347 GSNIHMVACGEFHTCAVTLS-GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
           GS I  VACG  HT A+  S G +Y  G G+ + G LG  S  S  +P+ V G
Sbjct: 301 GSTITQVACGNRHTLALVPSRGRVY--GFGLGSSGQLGTRSTKSLTLPQVVIG 351


>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 679

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 159/335 (47%), Gaps = 26/335 (7%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           ++ WG    G+LG G   E  V  P+ +D    +N+   ACG  HT  +T  G LYT G+
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGN 62

Query: 375 GIHNLGLLGQVSEISHWIPRK---VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
             H     GQ+   ++ +P K       +E   ++ + CG  H+ A+T+ G+LF++G   
Sbjct: 63  NDH-----GQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWGSNA 117

Query: 432 FGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            G LGH  D  S   PR ++++     V  SCG  H  A+             +S +LF 
Sbjct: 118 TGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALT------------NSGELFA 165

Query: 491 WGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
           WG    GQLG G    +V     VK    I    +ACG + + A++ +G +F  G   +G
Sbjct: 166 WGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFG 225

Query: 550 QLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           QLG      + +PT+++  ++   +  I+CG      ++ +  V+T G G  GQLGHG +
Sbjct: 226 QLGLNDLDSRCYPTQLK-TLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTH 284

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
            N+  P +V  L   ++  + CG   T A    +G
Sbjct: 285 GNEILPRMVFELMGSKITQIACGRKHTLAFVPSRG 319



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/280 (32%), Positives = 137/280 (48%), Gaps = 18/280 (6%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           LY WG  +H    LG + E     PR++    +   +    CG  HT  +T  GKL+T G
Sbjct: 3   LYCWGSTVHGELGLGGIEEEQVMTPREMDWS-QAANVQQAACGGSHTLLLTKDGKLYTCG 61

Query: 429 DGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           +   G LGH  +      P+ +  L+       SCG+ H+ A+                +
Sbjct: 62  NNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWG------------Q 109

Query: 488 LFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           LF+WG  A GQLGH  D      P  +K     +  +++CGHS  +ALT +G++F+ G+ 
Sbjct: 110 LFSWGSNATGQLGHDLDMVSYPAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWGAN 169

Query: 547 DYGQLGSPGSTGK-FPT-RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
           +YGQLG  G+TGK  PT  +  ++    I  IACG  H   VS    ++ WGK   GQLG
Sbjct: 170 EYGQLGL-GTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKNTFGQLG 228

Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
             D +++  PT ++ LR   V+ + CG +F+  +    GV
Sbjct: 229 LNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGV 268



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 163/344 (47%), Gaps = 29/344 (8%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           ++ WG  + +G LG  + G+E         + P+ ++ +   + Q  ACG  H +L+TK 
Sbjct: 3   LYCWGSTV-HGELG--LGGIE-----EEQVMTPREMDWSQAANVQQAACGGSHTLLLTKD 54

Query: 315 GQIFSWGEGSGGKLGHGV-EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           G++++ G    G+LGH         P+ I AL    +  V+CG  H+ A+T  G L++WG
Sbjct: 55  GKLYTCGNNDHGQLGHDTNNLPNKRPQFISALENYIVTQVSCGLSHSLALTNWGQLFSWG 114

Query: 374 DGIHNLGLLGQ-VSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
              +  G LG  +  +S+  PR +   +    +  I CG  H  A+T++G+LF +G   +
Sbjct: 115 S--NATGQLGHDLDMVSYPAPRMIK-SIATKTVVQISCGHSHCLALTNSGELFAWGANEY 171

Query: 433 GALGHGDRSSTSVPRE--VETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
           G LG G  +   VP    V++L  +     +CG  H+ A+ +            S  +F 
Sbjct: 172 GQLGLG-TTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSK------------SGAIFG 218

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG    GQLG  D + R  P  +K    +    ++CG   ++ LT  G VF+ G   +GQ
Sbjct: 219 WGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQ 278

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVY 593
           LG      +   R+   +    I  IACG  H +A V S+ +VY
Sbjct: 279 LGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVY 322



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 106/226 (46%), Gaps = 13/226 (5%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG     G LG  ++ V   +        P++++S        I+CG  H + +T
Sbjct: 108 GQLFSWGSN-ATGQLGHDLDMVSYPA--------PRMIKSIATKTVVQISCGHSHCLALT 158

Query: 313 KQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
             G++F+WG    G+LG G     V    L+ +L G  I  +ACG  H+ AV+ SG ++ 
Sbjct: 159 NSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGGNHSFAVSKSGAIFG 218

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   +  G LG     S   P ++   +  L +  I CG   +  +T  G +FT G GT
Sbjct: 219 WGK--NTFGQLGLNDLDSRCYPTQLK-TLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGT 275

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           FG LGHG   +  +PR V  L   K    +CG  HT A V   GK 
Sbjct: 276 FGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKV 321



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 91/190 (47%), Gaps = 32/190 (16%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F WG+    G LG       ++  D R    P  L++   L  + I+CG   +V +T
Sbjct: 214 GAIFGWGKN-TFGQLG-------LNDLDSR--CYPTQLKTLRSLGVRYISCGDDFSVFLT 263

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS-GDLYT 371
           ++G +F+ G G+ G+LGHG   +   P+++  L GS I  +ACG  HT A   S G +Y 
Sbjct: 264 QEGGVFTCGLGTFGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTLAFVPSRGKVYG 323

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA------GKLF 425
              G+  +G LG  S +S   P+ V              GPW +  I +A      GK+F
Sbjct: 324 --FGLGGVGQLGVGSSVSFNTPQIVR-------------GPWVSNWIDAAQSTLIVGKIF 368

Query: 426 TFGDGTFGAL 435
           + GD  F +L
Sbjct: 369 SGGDRCFVSL 378


>gi|449453906|ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
           sativus]
          Length = 481

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 191/412 (46%), Gaps = 57/412 (13%)

Query: 257 IWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           +WG G    LG G L    + V  SS DR   +L            + IACG  H + +T
Sbjct: 101 VWGNGDFGRLGLGNLDSQWSPVPCSSFDRE--ML------------KGIACGGAHTLFLT 146

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           + G++++ G  + G+LG   E   S   +   +    +H ++ G  H+C VT  G+LY W
Sbjct: 147 ESGRVYATGLNNFGQLGISDEKRFSTEPVEVRIPKEAMH-ISAGYNHSCVVTADGELYMW 205

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           G   +    LG+ S  +  +P KV   ++G+ I     G  H+ A+   G++F++GDG  
Sbjct: 206 GVNSNGQLGLGKKSAKAVHLPTKVD-SLDGIVIKRAALGSDHSIAVADGGEVFSWGDGRS 264

Query: 433 GALGHGDRS---------STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
           G LGHG  S         S   PR ++ L+ +K    + G+ H+A + E        NG 
Sbjct: 265 GRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAAGMLHSACVDE--------NG- 315

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
               ++ +G+ A  ++  G+A     P  +    D    +VACG   T  LT  G ++S 
Sbjct: 316 ---AVYIFGERATNRVSFGEANKATTPSLISTLLDCE--EVACGGYHTCVLTKGGDLYSW 370

Query: 544 GSADYGQLGSPG-STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN-- 600
           GS + G LG+   S    P R+EG      +  ++CG  H A +S  + ++TWG G +  
Sbjct: 371 GSNENGCLGNGSTSVSHLPERVEGPFSKSPVSKVSCGWKHTAAISGGA-IFTWGWGGSHG 429

Query: 601 ----------GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHK 642
                     GQLGHG + +   PT ++   + +V  V CG N T AI  +K
Sbjct: 430 TFSVDGHSSGGQLGHGSDVDYVKPTKIDLGENVKVVQVSCGFNHTGAILEYK 481



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 160/372 (43%), Gaps = 57/372 (15%)

Query: 186 SEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSA-VSSSSQGS 244
           +  L  T + + Y      +  LN     G+ D    S+     RI   +  +S+    S
Sbjct: 140 AHTLFLTESGRVY------ATGLNNFGQLGISDEKRFSTEPVEVRIPKEAMHISAGYNHS 193

Query: 245 CHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACG 304
           C    DG  ++++WG    NG LG       +     +   LP  ++S   +  +  A G
Sbjct: 194 CVVTADG--ELYMWGVN-SNGQLG-------LGKKSAKAVHLPTKVDSLDGIVIKRAALG 243

Query: 305 SKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV---------SYPKLIDALNGSNIHMVAC 355
           S H++ V   G++FSWG+G  G+LGHG E+             P+LI  L G  +  VA 
Sbjct: 244 SDHSIAVADGGEVFSWGDGRSGRLGHGHESTFLGFLKSTSEHTPRLIKELEGIKVKHVAA 303

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
           G  H+  V  +G +Y +G+   N    G+ ++ +   P  +S     L    + CG +HT
Sbjct: 304 GMLHSACVDENGAVYIFGERATNRVSFGEANKAT--TPSLISTL---LDCEEVACGGYHT 358

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE-TLKELKTVMASCGVWHTAAIVEVA 474
             +T  G L+++G    G LG+G  S + +P  VE    +      SCG  HTAAI    
Sbjct: 359 CVLTKGGDLYSWGSNENGCLGNGSTSVSHLPERVEGPFSKSPVSKVSCGWKHTAAI---- 414

Query: 475 GKTSGSNGLSSKKLFTWGDGAE------------GQLGHGDAEPRVVPLCVKVSDDISFC 522
                    S   +FTWG G              GQLGHG     V P  + + +++   
Sbjct: 415 ---------SGGAIFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPTKIDLGENVKVV 465

Query: 523 KVACGHSITIAL 534
           +V+CG + T A+
Sbjct: 466 QVSCGFNHTGAI 477


>gi|118397447|ref|XP_001031056.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila]
 gi|89285378|gb|EAR83393.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila
           SB210]
          Length = 1146

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 174/370 (47%), Gaps = 42/370 (11%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG--HGVEADVSYPKLIDA 344
           PK L+   +   + I+    H+  ++  G+++  G    GKLG      A+++  ++I  
Sbjct: 572 PKNLDRIYI---KQISTSQNHSACISANGELYVCGSALHGKLGLEELTMANINKFQMIPI 628

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
             G  +  VACG++HT A+T +  +Y+WG  +H    +GQ S      P  +  Q+    
Sbjct: 629 FKGIKVLQVACGDYHTLALTDTDQVYSWGGTLHKK--VGQRSGK----PAPIQ-QLNKKG 681

Query: 405 ISSICCGPWHTAAITSAGKLFTFG----DGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
           +  + CG +H+AAIT  G ++T+G    D   G LG G       P +++  +  K V  
Sbjct: 682 VIQVDCGDYHSAAITQNGDIYTWGGGGQDYNKGQLGLGHVKDIENPEKLKFFEGKKIVKV 741

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS---- 516
           SCG +HT A+             S  +LF WG G  G+LG    E    P+ VKV+    
Sbjct: 742 SCGQFHTMALT------------SENELFGWGAGEFGELGTSKHE--YTPIRVKVNFNQY 787

Query: 517 ----DDISF----CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNI 568
               ++I F      + CG   T+ LT  G ++S G    GQLG   S  +   ++   +
Sbjct: 788 NILYENILFENSIQNIKCGGHHTLLLTNNGYIYSSGYGRQGQLGLRNSENQCEFQLVWTL 847

Query: 569 KHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSV 628
             + I  IA G  H   +S +++++  G GA GQLG GD E++   T V +L  K   ++
Sbjct: 848 TKKKIIKIAAGWNHSLALSDQNDIFACGHGARGQLGLGDEESRTIFTHVVSLGGKNTATI 907

Query: 629 VCGSNFTAAI 638
             G + + A+
Sbjct: 908 SAGGDHSWAV 917



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 186/402 (46%), Gaps = 52/402 (12%)

Query: 266 LLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQ-------IF 318
           LLG   +  ++  +   D L    L+    L   +I+      V V  +GQ       IF
Sbjct: 487 LLGSYDHEDQLFQSQGDDKLKQSHLKDERNLSPNNISSMKSSNVNVQNEGQGNSIKCYIF 546

Query: 319 SWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM--VACGEFHTCAVTLSGDLYTWGDGI 376
           +WG+   G+L  G +    Y K  +  N   I++  ++  + H+  ++ +G+LY  G  +
Sbjct: 547 AWGKNESGELSFGNQKQPFYNKPENPKNLDRIYIKQISTSQNHSACISANGELYVCGSAL 606

Query: 377 H-NLGL----LGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           H  LGL    +  +++    IP       +G+++  + CG +HT A+T   +++++G   
Sbjct: 607 HGKLGLEELTMANINKF-QMIPI-----FKGIKVLQVACGDYHTLALTDTDQVYSWGGTL 660

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
              +G   RS    P  ++ L +   +   CG +H+AAI +        NG     ++TW
Sbjct: 661 HKKVGQ--RSGKPAP--IQQLNKKGVIQVDCGDYHSAAITQ--------NG----DIYTW 704

Query: 492 GDGAE----GQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           G G +    GQLG G  +    P  +K  +     KV+CG   T+ALT+  ++F  G+ +
Sbjct: 705 GGGGQDYNKGQLGLGHVKDIENPEKLKFFEGKKIVKVSCGQFHTMALTSENELFGWGAGE 764

Query: 548 YGQLGSPGSTGKFPTRIEGNIKH-----------RYIEDIACGSYHIAVVSSKSEVYTWG 596
           +G+LG+       P R++ N                I++I CG +H  ++++   +Y+ G
Sbjct: 765 FGELGTSKHEYT-PIRVKVNFNQYNILYENILFENSIQNIKCGGHHTLLLTNNGYIYSSG 823

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G  GQLG  ++EN+    LV  L  K++  +  G N + A+
Sbjct: 824 YGRQGQLGLRNSENQCEFQLVWTLTKKKIIKIAAGWNHSLAL 865



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 192/448 (42%), Gaps = 76/448 (16%)

Query: 123 EDNRCKSRSDSISSDSPRSHTQKNSPSHVSSI-SSDLTNKDSGDTQPI---LVAYENSPQ 178
           ED   +S+ D     S     +  SP+++SS+ SS++  ++ G    I   + A+     
Sbjct: 494 EDQLFQSQGDDKLKQSHLKDERNLSPNNISSMKSSNVNVQNEGQGNSIKCYIFAW----- 548

Query: 179 NRLGKAFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVS 238
              GK  S  LSF    + +       K+L+                    RI +    +
Sbjct: 549 ---GKNESGELSFGNQKQPFYNKPENPKNLD--------------------RIYIKQIST 585

Query: 239 SSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDA 298
           S +  +C       G++++ G  L +G LG      E++ A+     +  + +   VL  
Sbjct: 586 SQNHSAC---ISANGELYVCGSAL-HGKLGLE----ELTMANINKFQMIPIFKGIKVL-- 635

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
             +ACG  H + +T   Q++SW    GG L   V      P  I  LN   +  V CG++
Sbjct: 636 -QVACGDYHTLALTDTDQVYSW----GGTLHKKVGQRSGKPAPIQQLNKKGVIQVDCGDY 690

Query: 359 HTCAVTLSGDLYTWGDG--IHNLGL--LGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
           H+ A+T +GD+YTWG G   +N G   LG V +I +  P K+    EG +I  + CG +H
Sbjct: 691 HSAAITQNGDIYTWGGGGQDYNKGQLGLGHVKDIEN--PEKLKF-FEGKKIVKVSCGQFH 747

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV----------ETLKELKTVMASCGV 464
           T A+TS  +LF +G G FG LG      T +  +V            L E       CG 
Sbjct: 748 TMALTSENELFGWGAGEFGELGTSKHEYTPIRVKVNFNQYNILYENILFENSIQNIKCGG 807

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
            HT  +         +NG     +++ G G +GQLG  ++E +     V         K+
Sbjct: 808 HHTLLLT--------NNGY----IYSSGYGRQGQLGLRNSENQCEFQLVWTLTKKKIIKI 855

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLG 552
           A G + ++AL+    +F+ G    GQLG
Sbjct: 856 AAGWNHSLALSDQNDIFACGHGARGQLG 883



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 21/231 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           GD++ WG G      G   N  ++     +D   P+ L+         ++CG  H + +T
Sbjct: 699 GDIYTWGGG------GQDYNKGQLGLGHVKDIENPEKLKFFEGKKIVKVSCGQFHTMALT 752

Query: 313 KQGQIFSWGEGSGGKLGHG--------VEADVSYPKLI--DALNGSNIHMVACGEFHTCA 362
            + ++F WG G  G+LG          V+ + +   ++  + L  ++I  + CG  HT  
Sbjct: 753 SENELFGWGAGEFGELGTSKHEYTPIRVKVNFNQYNILYENILFENSIQNIKCGGHHTLL 812

Query: 363 VTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           +T +G +Y+ G G    LGL    ++    +   ++ +    +I  I  G  H+ A++  
Sbjct: 813 LTNNGYIYSSGYGRQGQLGLRNSENQCEFQLVWTLTKK----KIIKIAAGWNHSLALSDQ 868

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
             +F  G G  G LG GD  S ++   V +L    T   S G  H+ A+++
Sbjct: 869 NDIFACGHGARGQLGLGDEESRTIFTHVVSLGGKNTATISAGGDHSWAVLD 919


>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
           30864]
          Length = 1230

 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 166/374 (44%), Gaps = 55/374 (14%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
           A +IACG  H + +   GQ++S G    G+LGH  +   S P+ +DAL    I  +ACGE
Sbjct: 126 ASAIACGRAHTLFLV-DGQVYSCGSNDQGQLGH--KKHRSKPERVDALEPYTITQIACGE 182

Query: 358 FHTCAVTLSGDLYTWGDG-IHNLGL----------------------LGQVSEISHWI-- 392
            H+ A+T +G ++ WGD     LGL                      +  V E+      
Sbjct: 183 THSLALTSNGQVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLA 242

Query: 393 -------PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
                  PR V   + G +I  I CG   +  ++  G +F +GD T G L   +  +  V
Sbjct: 243 YMDFMTRPRLVRA-LTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPV 301

Query: 446 PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE 505
           P  V+ L  +     + G  HT A+          NG    ++++WG+   GQLG GD  
Sbjct: 302 PTLVKELYGIPIRQLAAGGRHTLALT--------FNG----QVYSWGNNQFGQLGVGDTA 349

Query: 506 PRVVPLCVKVSDDISFC-KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRI 564
           P  +P  +K  +   FC  +ACG   ++ LT TG V+S G+   GQLG      +   R+
Sbjct: 350 PHTIPSRLKTLEH-QFCAHIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRM 408

Query: 565 EGNIKHRYIEDIACGSYHIAVVSSKS-EVYTWGKGANGQLGHGDNENKQ----TPTLVEA 619
              +  +    + CG  H  V   K+ ++Y +G G NGQLG G     Q    TP LV  
Sbjct: 409 IFELMGKSASQVLCGRRHTIVFFPKTNKIYAFGLGGNGQLGTGVGVEPQQHVLTPMLVRV 468

Query: 620 LRDKQVKSVVCGSN 633
           L    +  +  G++
Sbjct: 469 LDATPILRIATGAS 482



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 166/353 (47%), Gaps = 40/353 (11%)

Query: 315 GQIFSWGEGSGGKLGHGVEAD----VSYPKLIDALNGSNIHM----VACGEFHTCAVTLS 366
           G +++WG  + G+LG  +  D    V  P  ++A +  ++      +ACG  HT  + + 
Sbjct: 83  GSVWAWGNPTDGQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAHTLFL-VD 141

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
           G +Y+ G   ++ G LG     S   P +V   +E   I+ I CG  H+ A+TS G++F 
Sbjct: 142 GQVYSCGS--NDQGQLGHKKHRSK--PERVDA-LEPYTITQIACGETHSLALTSNGQVFA 196

Query: 427 FGDGTFGALGHGDRSSTSVPR-----------EVETLKELKTVMASCGVWHTAA------ 469
           +GD     LG     S+  P             ++ + EL     +   + T        
Sbjct: 197 WGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAYMDFMTRPRLVRAL 256

Query: 470 ----IVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
               IV++    + S  LS +  +F WGD   GQL   + +   VP  VK    I   ++
Sbjct: 257 TGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLVKELYGIPIRQL 316

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYH 582
           A G   T+ALT  GQV+S G+  +GQLG  G T     P+R++  ++H++   IACG  H
Sbjct: 317 AAGGRHTLALTFNGQVYSWGNNQFGQLGV-GDTAPHTIPSRLK-TLEHQFCAHIACGEDH 374

Query: 583 IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
             V++    VY++G G  GQLGHG  +N+  P ++  L  K    V+CG   T
Sbjct: 375 SVVLTETGGVYSFGAGGQGQLGHGTLQNEINPRMIFELMGKSASQVLCGRRHT 427



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 121/255 (47%), Gaps = 18/255 (7%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I CG+  +++++++G +F+WG+ + G+L       V  P L+  L G  I  +A G  HT
Sbjct: 264 IVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLVKELYGIPIRQLAAGGRHT 323

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T +G +Y+WG+  +  G LG      H IP ++   +E    + I CG  H+  +T 
Sbjct: 324 LALTFNGQVYSWGN--NQFGQLGVGDTAPHTIPSRLK-TLEHQFCAHIACGEDHSVVLTE 380

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            G +++FG G  G LGHG   +   PR +  L         CG  HT             
Sbjct: 381 TGGVYSFGAGGQGQLGHGTLQNEINPRMIFELMGKSASQVLCGRRHTIVFFP-------- 432

Query: 481 NGLSSKKLFTWGDGAEGQLGHG-DAEPR---VVPLCVKVSDDISFCKVACGHSITIALTA 536
               + K++ +G G  GQLG G   EP+   + P+ V+V D     ++A G S +     
Sbjct: 433 ---KTNKIYAFGLGGNGQLGTGVGVEPQQHVLTPMLVRVLDATPILRIATGASASHCFAV 489

Query: 537 TGQVFSMGSADYGQL 551
            G    +G+A+  QL
Sbjct: 490 VGNRNHVGAAESAQL 504



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 14/187 (7%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           GDVF WG+     L    +  V +          P +++    +  + +A G +H + +T
Sbjct: 278 GDVFAWGDNTSGQLCLRELKTVPV----------PTLVKELYGIPIRQLAAGGRHTLALT 327

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             GQ++SWG    G+LG G  A  + P  +  L       +ACGE H+  +T +G +Y++
Sbjct: 328 FNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQFCAHIACGEDHSVVLTETGGVYSF 387

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G    G LG  +  +   PR +  ++ G   S + CG  HT        K++ FG G 
Sbjct: 388 GAG--GQGQLGHGTLQNEINPRMIF-ELMGKSASQVLCGRRHTIVFFPKTNKIYAFGLGG 444

Query: 432 FGALGHG 438
            G LG G
Sbjct: 445 NGQLGTG 451



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/325 (23%), Positives = 124/325 (38%), Gaps = 66/325 (20%)

Query: 365 LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ-------ISSICCGPWHTAA 417
           L+G ++ WG+     G LG      H +      ++E           S+I CG  HT  
Sbjct: 81  LAGSVWAWGNPTD--GQLGLRLTNDHTLAVPEPTELEAFSSVSMSTLASAIACGRAHTLF 138

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +   G++++ G    G LGH  +   S P  V+ L+       +CG  H+ A+       
Sbjct: 139 LVD-GQVYSCGSNDQGQLGH--KKHRSKPERVDALEPYTITQIACGETHSLALT------ 189

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAE-----------PRVVPLCVKVSDDIS------ 520
             SNG    ++F WGD    QLG   +E           P+     +   D++       
Sbjct: 190 --SNG----QVFAWGDNKASQLGLTPSESSRQPSTRSSAPKTAAASIDDVDELDAATLAY 243

Query: 521 -----------------FCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPT 562
                              ++ CG + ++ L+  G VF+ G    GQL      T   PT
Sbjct: 244 MDFMTRPRLVRALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPT 303

Query: 563 RIEGNIKHRY---IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
            +    K  Y   I  +A G  H   ++   +VY+WG    GQLG GD      P+ ++ 
Sbjct: 304 LV----KELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKT 359

Query: 620 LRDKQVKSVVCGSNFTAAICLHKGV 644
           L  +    + CG + +  +    GV
Sbjct: 360 LEHQFCAHIACGEDHSVVLTETGGV 384


>gi|74204005|dbj|BAE29004.1| unnamed protein product [Mus musculus]
          Length = 926

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 175/344 (50%), Gaps = 28/344 (8%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G  H++L+    +++S G+ S G+LG   +     P+ I ALN  ++ +V+CG+ H+ 
Sbjct: 28  ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSV 87

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV   G ++ WG G      +G+  EIS ++P K+   + G++I  + CG +H+ A++  
Sbjct: 88  AVCHKGKVFAWGAGSEGQLGIGEFKEIS-FMPTKIKA-LAGIKIIQVSCGHYHSLALSED 145

Query: 422 GKLFTFGDGTFGALGHGDRS-STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           G +F++G  + G LG G  S S ++P++V++L+ +     + G  H+ A+       +G+
Sbjct: 146 GHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL-----SLTGT 200

Query: 481 NGLSSKKLFTWGDGAEGQL---GHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
           +       F WG    GQL   G+   E    P  +    ++S   ++CG+  T  LT  
Sbjct: 201 S-------FGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEE 253

Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTW 595
           GQVF+ G    GQL  SP S  + P  IEG I  R +  I C SYH IA V +  +V + 
Sbjct: 254 GQVFTFGGNSSGQLQPSPRSGQRGPQLIEG-IGGR-VSQIECASYHTIAYVYTTGQVVSL 311

Query: 596 GKG----ANGQLGHGDNENKQTPTLV--EALRDKQVKSVVCGSN 633
           G+G    +N        EN     L+  E L D +VK +  G++
Sbjct: 312 GRGPSHTSNPTHQEAPAENSDITCLLAAEDLVDIEVKDIFAGAH 355



 Score =  113 bits (282), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 132/263 (50%), Gaps = 20/263 (7%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDAL 345
           P+ +++   L    ++CG +H+V V  +G++F+WG GS G+LG G   ++S+ P  I AL
Sbjct: 65  PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL 124

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
            G  I  V+CG +H+ A++  G +++WG        LG+ S  S  IP+KV   +EG+ +
Sbjct: 125 AGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSR-SQAIPQKVKS-LEGIPL 182

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGAL---GHGDRSSTSVPREVETLKELKTVMASC 462
           + +  G  H+ A++  G  F +G    G L   G+  +     P  +  LK L  +  SC
Sbjct: 183 AQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISC 242

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK-VSDDISF 521
           G  HTA + E              ++FT+G  + GQL       +  P  ++ +   +S 
Sbjct: 243 GYEHTAVLTE------------EGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQ 290

Query: 522 CKVACGHSITIALTATGQVFSMG 544
            + A  H+I    T TGQV S+G
Sbjct: 291 IECASYHTIAYVYT-TGQVVSLG 312



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 119/252 (47%), Gaps = 19/252 (7%)

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
           PR++     G+++     G  H+  + S  ++++ GD ++G LG     ST  P  ++ L
Sbjct: 12  PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVPL 511
            +L   + SCG  H+ A+                K+F WG G+EGQLG G+  E   +P 
Sbjct: 72  NDLHVDLVSCGKEHSVAVCH------------KGKVFAWGAGSEGQLGIGEFKEISFMPT 119

Query: 512 CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ--LGSPGSTGKFPTRIEGNIK 569
            +K    I   +V+CGH  ++AL+  G VFS G    GQ  LG    +   P +++ +++
Sbjct: 120 KIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVK-SLE 178

Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQT---PTLVEALRDKQVK 626
              +  +A G  H   +S     + WG   +GQL    N+ K+    P  + AL++  V 
Sbjct: 179 GIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVI 238

Query: 627 SVVCGSNFTAAI 638
            + CG   TA +
Sbjct: 239 YISCGYEHTAVL 250



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 117/253 (46%), Gaps = 18/253 (7%)

Query: 227 DSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALL 286
           +   + L S     S   CH+     G VF WG G   G LG      EIS        +
Sbjct: 72  NDLHVDLVSCGKEHSVAVCHK-----GKVFAWGAG-SEGQLGIG-EFKEIS-------FM 117

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDAL 345
           P  +++   +    ++CG  H++ +++ G +FSWG  S G+LG G  +   + P+ + +L
Sbjct: 118 PTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL 177

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQ 404
            G  +  VA G  H+ A++L+G  + WG      L L G   +   + P  + G ++ L 
Sbjct: 178 EGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSI-GALKNLS 236

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +  I CG  HTA +T  G++FTFG  + G L    RS    P+ +E +   +     C  
Sbjct: 237 VIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECAS 295

Query: 465 WHTAAIVEVAGKT 477
           +HT A V   G+ 
Sbjct: 296 YHTIAYVYTTGQV 308



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 1/87 (1%)

Query: 561 PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           P R++       +   A G +H  ++ S   VY+ G  + GQLG   +++ + P  ++AL
Sbjct: 12  PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71

Query: 621 RDKQVKSVVCGSNFTAAICLHKGVSIA 647
            D  V  V CG   + A+C HKG   A
Sbjct: 72  NDLHVDLVSCGKEHSVAVC-HKGKVFA 97



 Score = 47.8 bits (112), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 2/81 (2%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
           L    I+CG +H  ++T++GQ+F++G  S G+L     +    P+LI+ + G  +  + C
Sbjct: 235 LSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGG-RVSQIEC 293

Query: 356 GEFHTCA-VTLSGDLYTWGDG 375
             +HT A V  +G + + G G
Sbjct: 294 ASYHTIAYVYTTGQVVSLGRG 314


>gi|422295033|gb|EKU22332.1| phosphatidylinositide phosphatase sac1 [Nannochloropsis gaditana
            CCMP526]
          Length = 1021

 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 130/435 (29%), Positives = 191/435 (43%), Gaps = 54/435 (12%)

Query: 230  RISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKV 289
            R+  S+  S+ S  S H        VF WG+G    L    +    ++ A     L P+ 
Sbjct: 613  RVRQSTTFSTLSATSSHTIVPST-RVFAWGQGTEGQLGHSPIQKSALTGA--YVELSPRE 669

Query: 290  LESTVVLDAQSI-----------ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY 338
            L      D Q I           A G  ++  VT+ G++++WG+GS  KLGHG    V  
Sbjct: 670  LRLDTEQDQQKIEKHNPWGFVDLAAGLNYSAGVTEDGKLYTWGDGSNHKLGHGDSKPVYR 729

Query: 339  PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG---DGIHNLGLLGQVSEISHWIPRK 395
            P+ ++AL    I  VACG+FHT A+   G L+TWG        +G LG   E     P+ 
Sbjct: 730  PRQVEALQDVKIVKVACGDFHTAAIDEDGRLWTWGWGGSLFGGIGGLGHGDEAEQPRPKV 789

Query: 396  VSGQME-GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
            V   ++ G ++ S+ CG  HT  +T  G++ T G+G +G LG+G  S   VP  VE   E
Sbjct: 790  VRSLVDYGCRVGSVACGEKHTLILTDDGEVLTAGNGEYGRLGNGGSSDHGVPEPVELFDE 849

Query: 455  LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWGDG------AEGQLGHGDAEPR 507
                           IVEVA   + +  L+   K+FTWG          G +        
Sbjct: 850  ------------KTNIVEVAAGHAFNLVLTQDGKIFTWGRNEQGQLGLGGGISMDVYSME 897

Query: 508  VVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY--GQLGSPGSTGKFPTRIE 565
             VPL V+  +      VA GHS + A+T  G+++  G   +   Q+   G   K      
Sbjct: 898  AVPLLVEALESKKVVHVAAGHSHSAAVTEEGELYMWGMKIHLEPQVFRVGEGDK------ 951

Query: 566  GNIKHRYIEDIACGSYHIAVVSSKS-EVYTWGKGANGQLGHGDNENKQTPTLV-EALRDK 623
                   +  + CG  H AVV+  + +++T+GKG++  LGHG       P LV + L  +
Sbjct: 952  -------VWQVGCGGSHTAVVTEDAHQLFTFGKGSSLCLGHGTRSYTPHPKLVADGLAGR 1004

Query: 624  QVKSVVCGSNFTAAI 638
             V  V CG    A I
Sbjct: 1005 GVVKVACGHRHMAVI 1019



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 69/165 (41%), Gaps = 46/165 (27%)

Query: 301  IACGSKHAVLVTKQGQIFSWG--EGSGGKLGHGVEADV----SYPKLIDALNGSNIHMVA 354
            +A G    +++T+ G+IF+WG  E     LG G+  DV    + P L++AL    +  VA
Sbjct: 856  VAAGHAFNLVLTQDGKIFTWGRNEQGQLGLGGGISMDVYSMEAVPLLVEALESKKVVHVA 915

Query: 355  CGEFHTCAVTLSGDLYTWGDGIH---------------NLGLLGQ----VSEISHWI--- 392
             G  H+ AVT  G+LY WG  IH                +G  G     V+E +H +   
Sbjct: 916  AGHSHSAAVTEEGELYMWGMKIHLEPQVFRVGEGDKVWQVGCGGSHTAVVTEDAHQLFTF 975

Query: 393  ------------------PRKVSGQMEGLQISSICCGPWHTAAIT 419
                              P+ V+  + G  +  + CG  H A IT
Sbjct: 976  GKGSSLCLGHGTRSYTPHPKLVADGLAGRGVVKVACGHRHMAVIT 1020


>gi|307105210|gb|EFN53460.1| hypothetical protein CHLNCDRAFT_136724 [Chlorella variabilis]
          Length = 1660

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 184/400 (46%), Gaps = 67/400 (16%)

Query: 11  ERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWY-AGKEEKQLKLSHVSRI 69
           +R  E+A+  L+KG  LLK+GR GKPK   FR+   +  L W  A    KQ+KL +VS +
Sbjct: 31  KRPLEEALTALRKGALLLKHGRHGKPKVHFFRVCGADTQLKWRSASGSVKQVKLRNVSEV 90

Query: 70  IPGQRTAVFQRYPQPEKEYQSFSLIYR-----NRSLDLICKDKDEAELWFTALRALISED 124
           + GQ T VF+RYP  E    SFSL YR     +R+LDL   D+ + ELWFT LR + +  
Sbjct: 91  VAGQATEVFRRYPLREG-AGSFSLRYRAEDGTSRTLDLTATDEQQFELWFTGLRVVAA-- 147

Query: 125 NRCKSRSDSISSDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAY-ENSPQNRLGK 183
            R ++    +++  P S     SP+ ++        + SG   P+ V   E +P      
Sbjct: 148 -RLQALGTPVAALPP-SGPGGLSPAELARCVGIRMQEASG---PVCVPVPERTP------ 196

Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQG 243
              ++L++ +A     RA  VS SL  V  G ++D     S            V  ++ G
Sbjct: 197 --CDLLAWGSA----QRAPPVSMSLRSVM-GVVEDCWQHRSLPGLAPGGGHLDVYRAAVG 249

Query: 244 SCHEDF-DGLGDVFIWGEGLG------------------NGLLG--------------GA 270
             H       G V+ WGEG G                  +GL G                
Sbjct: 250 RKHAALVTATGAVYCWGEGRGGKLGLGHDQDQAQPLRIRHGLQGQCAVAVACGDDCTAAL 309

Query: 271 VNGVEI-----SSADRRDALLP-KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGS 324
            +G E+        D R  L+P +V           ++CG  H   V+  GQ+F+WGEG 
Sbjct: 310 TDGGELFMWGRLHVDSRPQLVPLQVRGDLRGRKVVQVSCGPFHCAAVSSDGQLFTWGEGF 369

Query: 325 GGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVT 364
           GGKLGHG +A+ ++P L+ AL G  +  VACG +H+ A+ 
Sbjct: 370 GGKLGHGDQANRAHPSLVHALAGRQVLEVACGVWHSAAIV 409



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 107/187 (57%), Gaps = 9/187 (4%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP-KLIDA 344
           LP +      LD    A G KHA LVT  G ++ WGEG GGKLG G + D + P ++   
Sbjct: 231 LPGLAPGGGHLDVYRAAVGRKHAALVTATGAVYCWGEGRGGKLGLGHDQDQAQPLRIRHG 290

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           L G     VACG+  T A+T  G+L+ WG  +H       V      +P +V G + G +
Sbjct: 291 LQGQCAVAVACGDDCTAALTDGGELFMWGR-LH-------VDSRPQLVPLQVRGDLRGRK 342

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +  + CGP+H AA++S G+LFT+G+G  G LGHGD+++ + P  V  L   + +  +CGV
Sbjct: 343 VVQVSCGPFHCAAVSSDGQLFTWGEGFGGKLGHGDQANRAHPSLVHALAGRQVLEVACGV 402

Query: 465 WHTAAIV 471
           WH+AAIV
Sbjct: 403 WHSAAIV 409



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/152 (36%), Positives = 85/152 (55%), Gaps = 6/152 (3%)

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVS-DDISFCKVACGHSITIALTATGQVFSMGSA 546
           ++ WG+G  G+LG G  + +  PL ++          VACG   T ALT  G++F     
Sbjct: 262 VYCWGEGRGGKLGLGHDQDQAQPLRIRHGLQGQCAVAVACGDDCTAALTDGGELFM---- 317

Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
            +G+L         P ++ G+++ R +  ++CG +H A VSS  +++TWG+G  G+LGHG
Sbjct: 318 -WGRLHVDSRPQLVPLQVRGDLRGRKVVQVSCGPFHCAAVSSDGQLFTWGEGFGGKLGHG 376

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           D  N+  P+LV AL  +QV  V CG   +AAI
Sbjct: 377 DQANRAHPSLVHALAGRQVLEVACGVWHSAAI 408



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 33/190 (17%)

Query: 485 SKKLFTWG--------------DGAEGQLGHGDAE---PRVVPLCVKVSDDISFCK-VAC 526
           S  L+TWG              D  +G LGHGD +    +++P  V  + +    + VA 
Sbjct: 486 SGALYTWGAVSESVAFGASEKRDSNKGCLGHGDGDLYRGQLLPTRVGGALEARQVRHVAA 545

Query: 527 GHSITIALTATGQVFSMGS--ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIA 584
           G  +T+A+T  G+VF MG+  A       P      P  + G ++  +++++ CG +H A
Sbjct: 546 GSHLTVAVTTGGRVFQMGATGASGPARHCPWEGATLPELVRGALQGYFVDELCCGMHHAA 605

Query: 585 VVS-------------SKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
                           +    + WG+G+ GQLG    ++   P LVE L+ + V  V CG
Sbjct: 606 ATGRPLDRKLGRPADHAPRAAFAWGRGSEGQLGVKGFDDSTAPVLVEGLKGRHVLQVACG 665

Query: 632 SNFTAAICLH 641
            + + A+C H
Sbjct: 666 GSNSLAVCEH 675



 Score = 47.0 bits (110), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 7/125 (5%)

Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLV-EALRDKQVKSV 628
           H  +   A G  H A+V++   VY WG+G  G+LG G ++++  P  +   L+ +   +V
Sbjct: 240 HLDVYRAAVGRKHAALVTATGAVYCWGEGRGGKLGLGHDQDQAQPLRIRHGLQGQCAVAV 299

Query: 629 VCGSNFTAAIC------LHKGVSIADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSK 682
            CG + TAA+       +   + +         + + + R R+    +CG  +C   SS 
Sbjct: 300 ACGDDCTAALTDGGELFMWGRLHVDSRPQLVPLQVRGDLRGRKVVQVSCGPFHCAAVSSD 359

Query: 683 KSMKT 687
             + T
Sbjct: 360 GQLFT 364



 Score = 39.3 bits (90), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 318 FSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           F+WG GS G+LG     D + P L++ L G ++  VACG  ++ AV    D+  W
Sbjct: 627 FAWGRGSEGQLGVKGFDDSTAPVLVEGLKGRHVLQVACGGSNSLAV-CEHDVRRW 680


>gi|440798633|gb|ELR19700.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein, partial [Acanthamoeba castellanii
           str. Neff]
          Length = 872

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 191/436 (43%), Gaps = 90/436 (20%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE--ADVS 337
           D ++AL P +LE       +S+ACG +H++ V + G ++ WG    G+LG+G    A+  
Sbjct: 13  DNKEALEPILLERFRGKRIRSVACGEQHSMAVGETGDVYVWGRAKEGQLGNGERKAANAL 72

Query: 338 YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG------DGIHN-------LGL--- 381
            P  ++ L    +    CG  H  AVT+ G LY WG      +G  N       +GL   
Sbjct: 73  KPVRVEGLRHERVVAGVCGYNHCLAVTVGGKLYQWGMLHKHVEGSANKEYFGMAIGLSGL 132

Query: 382 ----------------------------------LGQVSEISHWIPRKVSGQMEGLQISS 407
                                              G  +  +   P  V+G ++ +++  
Sbjct: 133 NSDRMKRMVGRSHSTYYAAGATGEELEELSRVQNFGSFTPYTQPSPEVVTG-LQHVKVVE 191

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
           +  G   + A+TS G+++++G      LG G R + SVP+ V  L+ +  V A+CG  H+
Sbjct: 192 VAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHRYNQSVPQLVPHLQGVHIVSATCGQQHS 251

Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG----DAEPRVVPLCVKVSDDIS--- 520
             ++  AG            ++T+G G  GQLGHG    +  PR V   V   + +    
Sbjct: 252 V-LLSAAGH-----------VYTFGLGVFGQLGHGVSSDERFPRRVEALVPAEEGVESAG 299

Query: 521 --FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGS-----TGK-----------FPT 562
               ++ACG   T+AL  +G V++ GSA+YGQ G   +     TG+            P 
Sbjct: 300 ERIVQIACGSHHTLALGVSGTVWTWGSAEYGQQGGTNAYEDWATGQRAEKSAAMICATPR 359

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRD 622
            + G    ++I  ++CG  H    +    VY+WG G+ G LGHG++  +  P L+  +  
Sbjct: 360 SLSGCFDGKHIAHVSCGHLHNLATARDGSVYSWGWGSYGVLGHGNHRFQLVPKLIRRIGG 419

Query: 623 KQVKSVVCGSNFTAAI 638
           +++     G+  + A+
Sbjct: 420 ERIVQTAAGAKHSLAV 435



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 113/242 (46%), Gaps = 36/242 (14%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+V+ WG               ++    R +  +P+++     +   S  CG +H+VL++
Sbjct: 206 GEVYSWGFN----------EKCQLGLGHRYNQSVPQLVPHLQGVHIVSATCGQQHSVLLS 255

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL---------NGSNIHMVACGEFHTCAV 363
             G ++++G G  G+LGHGV +D  +P+ ++AL          G  I  +ACG  HT A+
Sbjct: 256 AAGHVYTFGLGVFGQLGHGVSSDERFPRRVEALVPAEEGVESAGERIVQIACGSHHTLAL 315

Query: 364 TLSGDLYTWGDGIHNLGLLGQVSEISHW---------------IPRKVSGQMEGLQISSI 408
            +SG ++TWG      G  G  +    W                PR +SG  +G  I+ +
Sbjct: 316 GVSGTVWTWGSA--EYGQQGGTNAYEDWATGQRAEKSAAMICATPRSLSGCFDGKHIAHV 373

Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTA 468
            CG  H  A    G ++++G G++G LGHG+     VP+ +  +   + V  + G  H+ 
Sbjct: 374 SCGHLHNLATARDGSVYSWGWGSYGVLGHGNHRFQLVPKLIRRIGGERIVQTAAGAKHSL 433

Query: 469 AI 470
           A+
Sbjct: 434 AV 435



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 163/420 (38%), Gaps = 99/420 (23%)

Query: 253 GDVFIWG---EG-LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           GDV++WG   EG LGNG    A            +AL P  +E        +  CG  H 
Sbjct: 48  GDVYVWGRAKEGQLGNGERKAA------------NALKPVRVEGLRHERVVAGVCGYNHC 95

Query: 309 VLVTKQGQIFSWG------EGSGGKLGHGVEADVS------------------------- 337
           + VT  G+++ WG      EGS  K   G+   +S                         
Sbjct: 96  LAVTVGGKLYQWGMLHKHVEGSANKEYFGMAIGLSGLNSDRMKRMVGRSHSTYYAAGATG 155

Query: 338 ---------------------YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
                                 P+++  L    +  VA G   + AVT  G++Y+WG   
Sbjct: 156 EELEELSRVQNFGSFTPYTQPSPEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWG--F 213

Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
           +    LG     +  +P+ V   ++G+ I S  CG  H+  +++AG ++TFG G FG LG
Sbjct: 214 NEKCQLGLGHRYNQSVPQLVP-HLQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLG 272

Query: 437 HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS-SKKLFTWGDGA 495
           HG  S    PR VE L   +  + S G      IV++A  +  +  L  S  ++TWG   
Sbjct: 273 HGVSSDERFPRRVEALVPAEEGVESAG----ERIVQIACGSHHTLALGVSGTVWTWGSAE 328

Query: 496 EGQLGHGDA-------------------EPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
            GQ G  +A                    PR +  C    D      V+CGH   +A   
Sbjct: 329 YGQQGGTNAYEDWATGQRAEKSAAMICATPRSLSGCF---DGKHIAHVSCGHLHNLATAR 385

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTW 595
            G V+S G   YG LG      +   ++   I    I   A G+ H +AV +  S ++ +
Sbjct: 386 DGSVYSWGWGSYGVLGHGNHRFQLVPKLIRRIGGERIVQTAAGAKHSLAVNAGSSTLFAF 445


>gi|348684000|gb|EGZ23815.1| hypothetical protein PHYSODRAFT_449139 [Phytophthora sojae]
          Length = 539

 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 221/462 (47%), Gaps = 28/462 (6%)

Query: 176 SPQNRLGKAFSE----VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRI 231
           SP +R+  + S+    ++++ A A  + R   + K +  +   G +   +R  +      
Sbjct: 85  SPGDRVCLSASDRATVIVAYVALALKWGRLAYLLKGVKLLLENGDELNGARFESLGPLFR 144

Query: 232 SLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSAD-RRDALLPKVL 290
            L++      Q +  E+    G +  +G+G    L  G  + V     +   + ++P ++
Sbjct: 145 ELAATSIERPQIAFGEEEQPCGYLMSFGKGDHGKLGHGQCSHVSCQEGNCTENKMVPTMI 204

Query: 291 ESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN-GSN 349
            +T  +  + I   S H++ +T +G+  +WG G   +LGHG  +    P+ I+ L+    
Sbjct: 205 AATRDVLFRKIDSLSTHSIAITAKGEAMAWGNGDKYRLGHGSSSKEYTPRTIEFLSLKGR 264

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG-QMEGLQISSI 408
           +  +ACG  HT A+  SG+LY WG+G +    LG  ++ S   P + +G  +  ++   I
Sbjct: 265 VRDLACGLGHTLALIESGELYAWGNGSNGRLGLGDTNDRSS--PTRSNGASIAPVRFRHI 322

Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT------VMASC 462
            CG  H+  ++  G+ + +G    G  GHG  +     +E+E+ ++ +       V+ + 
Sbjct: 323 FCGASHSLGLSWDGRAYAWGKNNQGQCGHGHTNDQWTIQEIESFRDTEEGEEEEFVVYAA 382

Query: 463 GVWHTAAIVEVAGK--TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI- 519
           G W        +G+  + G     S++      G    LGHGD + R+ P  V+  DD  
Sbjct: 383 GGWEHTLFCTASGRVYSCGCGYKDSRRA-----GIPPVLGHGDCDRRLKPTSVQALDDTH 437

Query: 520 -SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDI 576
               KVACG   ++A+TA G+V++ GS   G+LG  G    F  PT +   +  + ++D 
Sbjct: 438 EEVVKVACGWDHSLAVTANGRVYTWGSGANGKLGH-GDEESFDIPTLVR-CMDGKKVKDA 495

Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
             G  H   ++   E++T G+G +G+LGHGD++ ++ PT +E
Sbjct: 496 KAGCEHTVFLTYDHELWTCGQGDSGRLGHGDSQTRKRPTKIE 537



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 114/399 (28%), Positives = 173/399 (43%), Gaps = 52/399 (13%)

Query: 272 NGVEISSADRRDALLPKVLE-STVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGH 330
           NG E++ A R ++L P   E +   ++   IA G +        G + S+G+G  GKLGH
Sbjct: 127 NGDELNGA-RFESLGPLFRELAATSIERPQIAFGEEEQPC----GYLMSFGKGDHGKLGH 181

Query: 331 GVEADVS-----------YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNL 379
           G  + VS            P +I A        +     H+ A+T  G+   WG+G  + 
Sbjct: 182 GQCSHVSCQEGNCTENKMVPTMIAATRDVLFRKIDSLSTHSIAITAKGEAMAWGNG--DK 239

Query: 380 GLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGD 439
             LG  S    + PR +       ++  + CG  HT A+  +G+L+ +G+G+ G LG GD
Sbjct: 240 YRLGHGSSSKEYTPRTIEFLSLKGRVRDLACGLGHTLALIESGELYAWGNGSNGRLGLGD 299

Query: 440 RSSTSVPREVE--TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS-SKKLFTWGDGAE 496
            +  S P      ++  ++     CG  H             S GLS   + + WG   +
Sbjct: 300 TNDRSSPTRSNGASIAPVRFRHIFCGASH-------------SLGLSWDGRAYAWGKNNQ 346

Query: 497 GQLGHGDAEPRVVPLCVKVSDDIS-------FCKVACGHSITIALTATGQVFSMGSA--D 547
           GQ GHG    +     ++   D             A G   T+  TA+G+V+S G    D
Sbjct: 347 GQCGHGHTNDQWTIQEIESFRDTEEGEEEEFVVYAAGGWEHTLFCTASGRVYSCGCGYKD 406

Query: 548 YGQLGSPGSTGKF-------PTRIEG-NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
             + G P   G         PT ++  +  H  +  +ACG  H   V++   VYTWG GA
Sbjct: 407 SRRAGIPPVLGHGDCDRRLKPTSVQALDDTHEEVVKVACGWDHSLAVTANGRVYTWGSGA 466

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           NG+LGHGD E+   PTLV  +  K+VK    G   T  +
Sbjct: 467 NGKLGHGDEESFDIPTLVRCMDGKKVKDAKAGCEHTVFL 505



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 125/278 (44%), Gaps = 36/278 (12%)

Query: 253 GDVFIWGEGLGNGLLG-GAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           G+++ WG G  NG LG G  N  + SS  R +        S   +  + I CG+ H++ +
Sbjct: 282 GELYAWGNG-SNGRLGLGDTN--DRSSPTRSNG------ASIAPVRFRHIFCGASHSLGL 332

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN-------IHMVACGEFHTCAVT 364
           +  G+ ++WG+ + G+ GHG   D    + I++   +        +   A G  HT   T
Sbjct: 333 SWDGRAYAWGKNNQGQCGHGHTNDQWTIQEIESFRDTEEGEEEEFVVYAAGGWEHTLFCT 392

Query: 365 LSGDLYTWGDGIHNLGLLGQVSEISH------WIPRKVSGQMEGLQ-ISSICCGPWHTAA 417
            SG +Y+ G G  +    G    + H        P  V    +  + +  + CG  H+ A
Sbjct: 393 ASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTSVQALDDTHEEVVKVACGWDHSLA 452

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +T+ G+++T+G G  G LGHGD  S  +P  V  +   K   A  G  HT  +       
Sbjct: 453 VTANGRVYTWGSGANGKLGHGDEESFDIPTLVRCMDGKKVKDAKAGCEHTVFLT------ 506

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
                    +L+T G G  G+LGHGD++ R  P  +++
Sbjct: 507 ------YDHELWTCGQGDSGRLGHGDSQTRKRPTKIEL 538


>gi|300122163|emb|CBK22737.2| unnamed protein product [Blastocystis hominis]
          Length = 355

 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 169/330 (51%), Gaps = 24/330 (7%)

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           G +++WG G  G+LG G + D S P++   ++       A G   T A+T  G L+T+G 
Sbjct: 14  GYLYTWGSGQFGQLGIGTQNDESLPQIAKEIDNEICTFTAAGANTTAAITQGGVLWTFGQ 73

Query: 375 GIHNLGLLGQVSEISHWI-PRKVSGQMEGLQI--SSICCGPWHTAAITSAGKLFTFGDGT 431
           G  N    G   + S+ + PR+V    +GL +   SIC G  H AA+T  G ++T+G GT
Sbjct: 74  GDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDG--HMAAVTEDGSVWTWGRGT 131

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           FG LGH +   T +P +V  L  ++ V  +CG  HT A+ +              ++F W
Sbjct: 132 FGRLGH-EVHETGIPEKVPGLDGMRFVKVACGHVHTLALTD------------DGRVFAW 178

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           G+   G +G  D      P  ++         ++ G   + AL+A  +V++ G+ +YGQL
Sbjct: 179 GNNKTGCVGVSD-RGTCAPQEIESLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQL 237

Query: 552 GSPGSTGKF---PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           G  G   ++   PTRI   +++  I  IACG YH+  +S+  EVY WG+G  GQ  +   
Sbjct: 238 G-LGQGARYISQPTRIR-TLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQGQTANEKK 295

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            +   P +++AL++ +VK +  G + +A +
Sbjct: 296 VDTNIPHVIDALKESRVKMIAAGGSHSAVV 325



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 146/289 (50%), Gaps = 24/289 (8%)

Query: 315 GQIFSWGEGSGGKLGHGVEADVS---YPKLI-DALNGSNIHMVACGEFHTCAVTLSGDLY 370
           G ++++G+G   +LGHG   D S    P+ + DA +G ++   +  + H  AVT  G ++
Sbjct: 66  GVLWTFGQGDSNQLGHGDTGDCSNQVLPREVEDAFDGLSVVNCSICDGHMAAVTEDGSVW 125

Query: 371 TWGDGIHNLGLLG-QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
           TWG G    G LG +V E    IP KV G ++G++   + CG  HT A+T  G++F +G+
Sbjct: 126 TWGRG--TFGRLGHEVHETG--IPEKVPG-LDGMRFVKVACGHVHTLALTDDGRVFAWGN 180

Query: 430 GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
              G +G  DR  T  P+E+E+L+  K +  S G+  +AA+             +  +++
Sbjct: 181 NKTGCVGVSDRG-TCAPQEIESLRGKKIIDISAGMESSAALS------------AEHEVY 227

Query: 490 TWGDGAEGQLGHGDAEPRVV-PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           TWG    GQLG G     +  P  ++   ++   ++ACG    +AL+A G+V++ G    
Sbjct: 228 TWGADNYGQLGLGQGARYISQPTRIRTLRNVPIVQIACGQYHMLALSAAGEVYAWGQGLQ 287

Query: 549 GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
           GQ  +          +   +K   ++ IA G  H AVV  K  ++T G+
Sbjct: 288 GQTANEKKVDTNIPHVIDALKESRVKMIAAGGSHSAVVDDKGRLFTVGE 336



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 133/274 (48%), Gaps = 23/274 (8%)

Query: 278 SADRRDALLPKVLESTVVLDAQSIACGS---KHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           + D  + +LP+ +E     D  S+   S    H   VT+ G +++WG G+ G+LGH V  
Sbjct: 84  TGDCSNQVLPREVEDA--FDGLSVVNCSICDGHMAAVTEDGSVWTWGRGTFGRLGHEVH- 140

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
           +   P+ +  L+G     VACG  HT A+T  G ++ WG+  +  G +G VS+     P+
Sbjct: 141 ETGIPEKVPGLDGMRFVKVACGHVHTLALTDDGRVFAWGN--NKTGCVG-VSDRGTCAPQ 197

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSS-TSVPREVETLK 453
           ++   + G +I  I  G   +AA+++  +++T+G   +G LG G  +   S P  + TL+
Sbjct: 198 EIE-SLRGKKIIDISAGMESSAALSAEHEVYTWGADNYGQLGLGQGARYISQPTRIRTLR 256

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +  V  +CG +H  A+             ++ +++ WG G +GQ  +       +P  +
Sbjct: 257 NVPIVQIACGQYHMLALS------------AAGEVYAWGQGLQGQTANEKKVDTNIPHVI 304

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
               +     +A G S +  +   G++F++G  +
Sbjct: 305 DALKESRVKMIAAGGSHSAVVDDKGRLFTVGEEE 338


>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Takifugu rubripes]
          Length = 1031

 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 154/319 (48%), Gaps = 20/319 (6%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + I CG +H+V +   G +++ G  S G+LGH        P+ + AL+   I +V+CG+ 
Sbjct: 36  KEIVCGGQHSVFLLHDGSVYTCGSNSCGQLGHNKPGIT--PEFVGALDTQKITLVSCGQA 93

Query: 359 HTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           H+ AV   G ++ WG G    LGL    +E +  IPR +  ++   +I+ + CG  H  A
Sbjct: 94  HSLAVNEQGQVFAWGAGEEGQLGL--GTTETAVRIPRLIK-RLCDHRIAQVMCGNQHCIA 150

Query: 418 ITSAGKLFTFGDGTFGALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           ++  G+LFT+G  T G LG G    S   P+ +++L  +     + G  H+ A+      
Sbjct: 151 LSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFAL-----S 205

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
            SG+       +F WG    GQLG  D + R VP  +K         ++CG   T ALT 
Sbjct: 206 LSGA-------VFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTK 258

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTW 595
            G +F+ G   +GQLG   +  +   R    +    +  I CG +H +A   S   VY +
Sbjct: 259 DGGLFTFGDGSWGQLGHGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVYAF 318

Query: 596 GKGANGQLGHGDNENKQTP 614
           G  ++GQLG G     ++P
Sbjct: 319 GCNSHGQLGTGVLSADKSP 337



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 151/326 (46%), Gaps = 22/326 (6%)

Query: 317 IFSWGEGSGGKLGHGVEADVSY-PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           +  WG+   G+LG GVE +  + P+  +   G  +  + CG  H+  +   G +YT G  
Sbjct: 1   MLCWGKAKDGQLGIGVERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSN 60

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
                  GQ+      I  +  G ++  +I+ + CG  H+ A+   G++F +G G  G L
Sbjct: 61  S-----CGQLGHNKPGITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVFAWGAGEEGQL 115

Query: 436 GHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG 494
           G G   ++  +PR ++ L + +     CG  H  A+ +              +LFTWG  
Sbjct: 116 GLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALSK------------DGQLFTWGQN 163

Query: 495 AEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS 553
             GQLG G  EP ++ P  +K    I   K+  G   + AL+ +G VF  G    GQLG 
Sbjct: 164 TSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLGL 223

Query: 554 PGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                +  P  I+  ++ + +  I+CG  H A ++    ++T+G G+ GQLGHG   N+ 
Sbjct: 224 NDIQDRAVPCHIK-FLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHGSTANEL 282

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P  V  L   +V  + CG + T A 
Sbjct: 283 LPRRVLELMGTEVSQITCGRHHTLAF 308



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 138/294 (46%), Gaps = 31/294 (10%)

Query: 253 GDVFIWGEGLGNGL-LGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           G VF WG G    L LG     V I          P++++         + CG++H + +
Sbjct: 102 GQVFAWGAGEEGQLGLGTTETAVRI----------PRLIKRLCDHRIAQVMCGNQHCIAL 151

Query: 312 TKQGQIFSWGEGSGGKLGHGV-EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           +K GQ+F+WG+ + G+LG G  E    +P+ + +L G  +  +  G  H+ A++LSG ++
Sbjct: 152 SKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVF 211

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            WG   +  G LG        +P  +   +   ++  I CG  HTAA+T  G LFTFGDG
Sbjct: 212 GWGK--NKAGQLGLNDIQDRAVPCHIKF-LRSQKVVHISCGEEHTAALTKDGGLFTFGDG 268

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
           ++G LGHG  ++  +PR V  L   +    +CG  HT A              SS  ++ 
Sbjct: 269 SWGQLGHGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAP-----------SSGGVYA 317

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVK---VSDDI--SFCKVACGHSITIALTATGQ 539
           +G  + GQLG G       P  +K   +S  I  +  K+ CG   +  L +  Q
Sbjct: 318 FGCNSHGQLGTGVLSADKSPYPLKTSFLSGSIHGTVTKITCGGDHSFLLYSNDQ 371


>gi|340507220|gb|EGR33218.1| hypothetical protein IMG5_058940 [Ichthyophthirius multifiliis]
          Length = 660

 Score =  140 bits (353), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/372 (27%), Positives = 167/372 (44%), Gaps = 43/372 (11%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG--HGVEADVSYPKLIDA 344
           PK LE   +   + I+    H+  V+  G ++  G    GKLG  +   A+++  +++ A
Sbjct: 87  PKNLEKIYI---KQISTSQNHSSCVSSNGDLYVCGSALHGKLGLENLTMANINKFQILTA 143

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGL 403
           L G  +  VACG++HT A+T +  +Y WG  ++  +G  G      H        Q+   
Sbjct: 144 LKGIKVLQVACGDYHTLALTENDQVYAWGGTLYKKVGQRGGKPGPIH--------QLTNK 195

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDG----TFGALGHGDRSSTSVPREVETLKELKTVM 459
            ++ I CG +H+ AIT+ G ++T+G G      G LG G      +P +++  K  K + 
Sbjct: 196 GVTYIDCGDFHSVAITNQGDIYTWGGGGQFQNKGQLGLGHMKDIEIPEQIQFFKNKKVIK 255

Query: 460 ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR------------ 507
            SCG +HT A+++              +L+ WG G  G+LG G                 
Sbjct: 256 VSCGQFHTMALID------------DNQLYGWGAGELGELGSGKVLYFLYLLIILILKKY 303

Query: 508 -VVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEG 566
             +        D     + CG   T+ L   G V+S G   YGQLG   +      ++  
Sbjct: 304 ITINKNNYYKKDPQISDIKCGGHHTLILLNIGYVYSTGYGSYGQLGLKTTNNHCEFQLVW 363

Query: 567 NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVK 626
            +  + I  IA G  H  V++  ++V++ G  A GQLG GD E++   T + AL  K V 
Sbjct: 364 TLTKKKIIKIAAGWNHSLVLTDTNDVFSCGYNAWGQLGLGDEESRTLFTHISALAGKNVV 423

Query: 627 SVVCGSNFTAAI 638
            +  G + + AI
Sbjct: 424 EISAGGSHSWAI 435



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 22/233 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           GD++ WG G      G   N  ++     +D  +P+ ++         ++CG  H + + 
Sbjct: 214 GDIYTWGGG------GQFQNKGQLGLGHMKDIEIPEQIQFFKNKKVIKVSCGQFHTMALI 267

Query: 313 KQGQIFSWGEGSGGKLGHG------VEADVSYPKLIDALNGSNIHM-------VACGEFH 359
              Q++ WG G  G+LG G          +   K    +N +N +        + CG  H
Sbjct: 268 DDNQLYGWGAGELGELGSGKVLYFLYLLIILILKKYITINKNNYYKKDPQISDIKCGGHH 327

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           T  +   G +Y+ G G +  G LG  +  +H    ++   +   +I  I  G  H+  +T
Sbjct: 328 TLILLNIGYVYSTGYGSY--GQLGLKTTNNH-CEFQLVWTLTKKKIIKIAAGWNHSLVLT 384

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
               +F+ G   +G LG GD  S ++   +  L     V  S G  H+ AI+E
Sbjct: 385 DTNDVFSCGYNAWGQLGLGDEESRTLFTHISALAGKNVVEISAGGSHSWAILE 437


>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
          Length = 434

 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 167/347 (48%), Gaps = 18/347 (5%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK-QGQIFSWGEGSGGKLGHGVE 333
           ++   D  D   P+ + S +   A S+ CG+++++ V     Q++SWG G  G+LG G  
Sbjct: 41  QLGHGDAEDRQEPQAVFSLLHRGATSVHCGAEYSMAVAGGDKQVYSWGWGDFGRLGTGDV 100

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
            DV  P  + AL G  +  VACG+ HT   T  G L+ +G   +    LG + +     P
Sbjct: 101 KDVFIPCPLPALAGRRVASVACGDTHTLVATAEGQLFAFGRNQNGQCGLGSIQDCLE--P 158

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           + V+  ++G ++ ++ CG  H+  +TS G+++ +G G +G +G G+     +P   + L+
Sbjct: 159 QLVTA-LQGKEVVAVACGAEHSMCVTSEGEVYCWGWGRYGNIGDGESQDRHLPTLAKGLE 217

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            +K    +CG  H+ A+ E               ++TWG GA  QL  GD +   VP  V
Sbjct: 218 GVKVAQVNCGWRHSIAVDE------------GGAMYTWGWGAYAQLMQGDRKDHYVPKRV 265

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
           +    ++   VA G   T+A  + G++F+ G   +GQ G   +      +    +    +
Sbjct: 266 EAVQQVA--TVAGGWRHTMAADSQGRLFASGWNKFGQCGVGHNEDVVRVQQVEALAGERV 323

Query: 574 EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
             +  G  H   V+   + ++WG+  NGQLGH   ++  +P  + AL
Sbjct: 324 VQVKSGWKHTMAVTHTGKFFSWGRNVNGQLGHSGMQDSNSPVELAAL 370



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 157/344 (45%), Gaps = 25/344 (7%)

Query: 301 IACGSKH--AVLVTKQG-QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
           +ACGS H  A++ T  G  + SWG G  G+LGHG   D   P+ + +L       V CG 
Sbjct: 12  LACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHCGA 71

Query: 358 FHTCAVTLSGD--LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
            ++ AV   GD  +Y+WG G  + G LG       +IP  +   + G +++S+ CG  HT
Sbjct: 72  EYSMAVA-GGDKQVYSWGWG--DFGRLGTGDVKDVFIPCPLPA-LAGRRVASVACGDTHT 127

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
              T+ G+LF FG    G  G G       P+ V  L+  + V  +CG  H+  +     
Sbjct: 128 LVATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVACGAEHSMCVT---- 183

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
                   S  +++ WG G  G +G G+++ R +P   K  + +   +V CG   +IA+ 
Sbjct: 184 --------SEGEVYCWGWGRYGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAVD 235

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
             G +++ G   Y QL        + P R+E     + +  +A G  H     S+  ++ 
Sbjct: 236 EGGAMYTWGWGAYAQLMQGDRKDHYVPKRVEAV---QQVATVAGGWRHTMAADSQGRLFA 292

Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G    GQ G G NE+      VEAL  ++V  V  G   T A+
Sbjct: 293 SGWNKFGQCGVGHNEDVVRVQQVEALAGERVVQVKSGWKHTMAV 336



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 114/238 (47%), Gaps = 14/238 (5%)

Query: 404 QISSICCGPWHTAAITS---AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
           ++  + CG  H+ A+ S      + ++G G  G LGHGD      P+ V +L        
Sbjct: 8   EVIGLACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSV 67

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
            CG  ++ A   VAG          K++++WG G  G+LG GD +   +P  +       
Sbjct: 68  HCGAEYSMA---VAG--------GDKQVYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRR 116

Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS 580
              VACG + T+  TA GQ+F+ G    GQ G          ++   ++ + +  +ACG+
Sbjct: 117 VASVACGDTHTLVATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVACGA 176

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            H   V+S+ EVY WG G  G +G G+++++  PTL + L   +V  V CG   + A+
Sbjct: 177 EHSMCVTSEGEVYCWGWGRYGNIGDGESQDRHLPTLAKGLEGVKVAQVNCGWRHSIAV 234


>gi|299117183|emb|CBN75147.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1991

 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 124/363 (34%), Positives = 168/363 (46%), Gaps = 58/363 (15%)

Query: 277  SSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV 336
            S AD    LLP  L          +ACG +H+ LVT  G + + G G  G+LGHG E D 
Sbjct: 1577 SDADGALKLLP--LRIPTEWQVVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDA 1634

Query: 337  SYPKLIDALNGSNIHMV--ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
              PK++ AL  +   +V   CG  HT     SG +Y+WG G      LG+V  +    PR
Sbjct: 1635 LEPKVVRALADTKQAVVWAGCGREHTLVALASGSVYSWGWGEGGRLGLGEVDAVLS--PR 1692

Query: 395  KVSG-QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSST---SVPREVE 450
            +V      G++I+ + CG  H+ A++ AG+L+ FG    G LG      T   S PR V 
Sbjct: 1693 RVEEFDNLGVRITRVSCGREHSLAVSDAGRLYAFGPSDGGRLGFKAVVGTGGVSAPRIVR 1752

Query: 451  T--LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE--- 505
               L E + V A+ G  H++ +             +S K+FTWG G+ G LGHG AE   
Sbjct: 1753 APCLAEERVVAAAGGQMHSSCVC------------ASGKVFTWGHGSTGALGHGVAEDEP 1800

Query: 506  -PRVV-----------PLCVKVSD----DISFCKVACGHSITIALTATGQVFSMGSADYG 549
             PR+V           P      D    DI    VACG   T+ LT  G+V + G    G
Sbjct: 1801 TPRMVSGFGRDEARSAPQGAGEQDDPDADILATSVACGAWHTLVLTKAGKVHAFGDGFTG 1860

Query: 550  QLGSPGSTGKFPT--------RIEGNIKHR-------YIEDIACGSYHIAVVSSKSEVYT 594
            QLG     G+  +        RIE N           Y+ ++ACGS+  AVVSS+  +Y 
Sbjct: 1861 QLGLEDRGGEKESRALSPRVVRIERNAGGGGGSPGDVYVTEVACGSFSSAVVSSEGNLYH 1920

Query: 595  WGK 597
            WGK
Sbjct: 1921 WGK 1923



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 118/239 (49%), Gaps = 21/239 (8%)

Query: 404  QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK--TVMAS 461
            Q+  + CG  H+A +T++G + T G G  G LGHGD      P+ V  L + K   V A 
Sbjct: 1595 QVVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALEPKVVRALADTKQAVVWAG 1654

Query: 462  CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD--I 519
            CG  HT               L+S  +++WG G  G+LG G+ +  + P  V+  D+  +
Sbjct: 1655 CGREHTLV------------ALASGSVYSWGWGEGGRLGLGEVDAVLSPRRVEEFDNLGV 1702

Query: 520  SFCKVACGHSITIALTATGQVFSMGSADYGQLGSP---GSTGKFPTRI--EGNIKHRYIE 574
               +V+CG   ++A++  G++++ G +D G+LG     G+ G    RI     +    + 
Sbjct: 1703 RITRVSCGREHSLAVSDAGRLYAFGPSDGGRLGFKAVVGTGGVSAPRIVRAPCLAEERVV 1762

Query: 575  DIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSN 633
              A G  H + V +  +V+TWG G+ G LGHG  E++ TP +V      + +S   G+ 
Sbjct: 1763 AAAGGQMHSSCVCASGKVFTWGHGSTGALGHGVAEDEPTPRMVSGFGRDEARSAPQGAG 1821



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 7/84 (8%)

Query: 555  GSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
            G+    P RI    +   +  +ACG  H A+V++   V T G G  G+LGHGD E+   P
Sbjct: 1581 GALKLLPLRIPTEWQ---VVQVACGFRHSALVTASGLVLTLGHGETGRLGHGDEEDALEP 1637

Query: 615  TLVEALRDKQVKSVV---CGSNFT 635
             +V AL D + ++VV   CG   T
Sbjct: 1638 KVVRALADTK-QAVVWAGCGREHT 1660


>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1679

 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 183/390 (46%), Gaps = 37/390 (9%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           + + WG    + L+ G  N  +I +  + DA      ++ + L+A     G      +  
Sbjct: 338 EAYAWGSNSSHQLVEG--NKDKILTPKKNDAF-----KNAIQLEA-----GQYCTFALFD 385

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN--GSNIHMVACG---EFHTCAVTLSGD 368
            G + + G+GS GKLG G   D S  + +  LN    NI  ++     + HT A+T +G 
Sbjct: 386 DGSLHACGKGSHGKLGLG---DSSSKQCLHKLNLFNQNIDQISSSKGSDSHTLALTKNGV 442

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +Y+WGDG    G LG  +  +  +P+ + G  +   I+ I  G  H+AAIT  G L+T+G
Sbjct: 443 VYSWGDG--EFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDLYTWG 500

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           +G  G LGHGD S   VP  V ++     V A C   HT  + +               +
Sbjct: 501 EGEHGRLGHGDSSIQRVPTLVRSIDAASQVAAGCS--HTVVLSK-----------DEMTV 547

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           +T+G G  G+LGHG+ +    P  V     I   K+A G   +IALT TG ++  G    
Sbjct: 548 WTFGAGDNGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGFIYVWGCGPC 607

Query: 549 GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
             +G+  +    P  +E  ++  +I DI+ G  H   +S+  EVY+WG    GQ G G  
Sbjct: 608 LGVGAADAVHLLPKIVES-LRDVHIVDISLGDCHCLALSADHEVYSWGNNNMGQCGLGHC 666

Query: 609 ENKQT-PTLVEALRDKQVKSVVCGSNFTAA 637
               + PT V AL   +++ +  G++ + A
Sbjct: 667 FTPVSLPTKVLALDGIKIEQISTGTSHSFA 696



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 139/286 (48%), Gaps = 37/286 (12%)

Query: 364 TLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGK 423
           +L  + Y WG    +  + G   +I    P+K       +Q+ +   G + T A+   G 
Sbjct: 334 SLKHEAYAWGSNSSHQLVEGNKDKI--LTPKKNDAFKNAIQLEA---GQYCTFALFDDGS 388

Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKE-LKTVMASCGV-WHTAAIVEVAGKTSGSN 481
           L   G G+ G LG GD SS     ++    + +  + +S G   HT A+ +        N
Sbjct: 389 LHACGKGSHGKLGLGDSSSKQCLHKLNLFNQNIDQISSSKGSDSHTLALTK--------N 440

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK---VSDDISFCKVACGHSITIALTATG 538
           G+    +++WGDG  G+LGHG+   + +P  ++    +  I+F      HS   A+T  G
Sbjct: 441 GV----VYSWGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSA--AITKDG 494

Query: 539 QVFSMGSADYGQLGS-PGSTGKFPTRIEGNIKHRYIE---DIACGSYHIAVVSSKSE--V 592
            +++ G  ++G+LG    S  + PT +      R I+    +A G  H  VV SK E  V
Sbjct: 495 DLYTWGEGEHGRLGHGDSSIQRVPTLV------RSIDAASQVAAGCSH-TVVLSKDEMTV 547

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +T+G G NG+LGHG+ + +  P +V+AL+  ++K +  G+  + A+
Sbjct: 548 WTFGAGDNGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIAL 593



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 114/221 (51%), Gaps = 22/221 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQS-IACGSKHAVLV 311
           GD++ WGEG  +G LG         S+ +R   +P ++ S   +DA S +A G  H V++
Sbjct: 494 GDLYTWGEG-EHGRLGHG------DSSIQR---VPTLVRS---IDAASQVAAGCSHTVVL 540

Query: 312 TK-QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           +K +  ++++G G  GKLGHG      YPK++DAL G  I  +A G   + A+T +G +Y
Sbjct: 541 SKDEMTVWTFGAGDNGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIALTWTGFIY 600

Query: 371 TWGDGIHNLGLLGQ-VSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
            WG G      LG   ++  H +P+ V   +  + I  I  G  H  A+++  +++++G+
Sbjct: 601 VWGCG----PCLGVGAADAVHLLPKIVES-LRDVHIVDISLGDCHCLALSADHEVYSWGN 655

Query: 430 GTFGALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAA 469
              G  G G   +  S+P +V  L  +K    S G  H+ A
Sbjct: 656 NNMGQCGLGHCFTPVSLPTKVLALDGIKIEQISTGTSHSFA 696



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 22/189 (11%)

Query: 468 AAIVEVAGKTSGSNGLSSKKL-------------FTWGDGAEGQLGHGDAEPRVVPLCVK 514
           AAI+ +   +  +N L+ + L             + WG  +  QL  G+ +  + P   K
Sbjct: 306 AAILLLGNVSKKANLLTHQHLGSPNDSSSLKHEAYAWGSNSSHQLVEGNKDKILTP---K 362

Query: 515 VSDDI-SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
            +D   +  ++  G   T AL   G + + G   +G+LG   S+ K     + N+ ++ I
Sbjct: 363 KNDAFKNAIQLEAGQYCTFALFDDGSLHACGKGSHGKLGLGDSSSKQCLH-KLNLFNQNI 421

Query: 574 EDIACG---SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVV- 629
           + I+       H   ++    VY+WG G  G+LGHG+   ++ P ++  +   Q+ + + 
Sbjct: 422 DQISSSKGSDSHTLALTKNGVVYSWGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFIS 481

Query: 630 CGSNFTAAI 638
            GS  +AAI
Sbjct: 482 AGSRHSAAI 490


>gi|403356078|gb|EJY77629.1| Hect E3 ubiquitin ligase [Oxytricha trifallax]
          Length = 1178

 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 163/353 (46%), Gaps = 61/353 (17%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV----------SYPKLIDALNGSNI 350
           +A G  H V V  +G ++SWG  + G+LG     D+            P++I+ L    +
Sbjct: 28  VAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPYQPTPRIIELLQSVKV 87

Query: 351 HMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH------WIPR-KVSGQMEGL 403
             +ACG+ HT A+T  G LY+WG G          S +        + P+ K+   ++ L
Sbjct: 88  IQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGCPYQPKPKLIVVLKNL 147

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSS----------TSVPREVETLK 453
           ++  + CG  HT A+ + G L+++G G  G LGH D SS            +PR V  LK
Sbjct: 148 EVKQVACGKAHTVAVLNNGHLYSWGAGACGQLGHPDTSSFPADEDGYPYQPIPRCVTALK 207

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG---------DA 504
             K + ASCG  HT  + +              +++ +G G+ GQLG G         D+
Sbjct: 208 PFKLIHASCGDVHTMVLTDQG------------EIYCFGGGSCGQLGFGNISQMPLDVDS 255

Query: 505 EPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG------SPGST 557
            P + VP  ++    I    ++CG S ++AL+  G V++ G A YGQLG       P +T
Sbjct: 256 CPFMPVPKKIESLQGIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLGLDDIRDLPKNT 315

Query: 558 GK-----FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
                  FP ++   + ++ I  I+CG  H   ++    +Y++G    GQLG 
Sbjct: 316 DNKPYQPFPQKVVA-LMNKKIVAISCGETHTLALTEGGHLYSFGGNTCGQLGQ 367



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 158/353 (44%), Gaps = 69/353 (19%)

Query: 338 YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
           +P  ID L    I+ VA G+ HT AV + G++Y+WG      G LG  S     +P  V 
Sbjct: 13  HPLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVYSWGASA--CGQLGLASMKD--LPTDVE 68

Query: 398 GQ-----------MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSST--- 443
           G            ++ +++  I CG  HT A+T  GKL+++G G  G LGH D S+    
Sbjct: 69  GYPYQPTPRIIELLQSVKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKD 128

Query: 444 -------SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
                    P+ +  LK L+    +CG  HT A+            L++  L++WG GA 
Sbjct: 129 EDGCPYQPKPKLIVVLKNLEVKQVACGKAHTVAV------------LNNGHLYSWGAGAC 176

Query: 497 GQLGHGDAEP----------RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           GQLGH D             + +P CV           +CG   T+ LT  G+++  G  
Sbjct: 177 GQLGHPDTSSFPADEDGYPYQPIPRCVTALKPFKLIHASCGDVHTMVLTDQGEIYCFGGG 236

Query: 547 DYGQLGSPGSTGKFPTRIEG-----------NIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
             GQLG  G+  + P  ++            +++  +I  ++CG  H   +S +  VY W
Sbjct: 237 SCGQLGF-GNISQMPLDVDSCPFMPVPKKIESLQGIFIVSLSCGDSHSMALSREGHVYAW 295

Query: 596 GKGANGQLG---------HGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAAI 638
           G+   GQLG         + DN+  Q  P  V AL +K++ ++ CG   T A+
Sbjct: 296 GEATYGQLGLDDIRDLPKNTDNKPYQPFPQKVVALMNKKIVAISCGETHTLAL 348



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 150/340 (44%), Gaps = 55/340 (16%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+V+ WG      L   ++  +            P+++E    +    IACG  H V +T
Sbjct: 42  GNVYSWGASACGQLGLASMKDLPTDVEGYPYQPTPRIIELLQSVKVIQIACGDAHTVALT 101

Query: 313 KQGQIFSWGEGSGGKLGH-------GVEADVSY---PKLIDALNGSNIHMVACGEFHTCA 362
           + G+++SWG G  G+LGH         E    Y   PKLI  L    +  VACG+ HT A
Sbjct: 102 QDGKLYSWGGGGCGQLGHPDTSAMPKDEDGCPYQPKPKLIVVLKNLEVKQVACGKAHTVA 161

Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEIS----------HWIPRKVSGQMEGLQISSICCGP 412
           V  +G LY+WG G    G LG     S            IPR V+  ++  ++    CG 
Sbjct: 162 VLNNGHLYSWGAGA--CGQLGHPDTSSFPADEDGYPYQPIPRCVTA-LKPFKLIHASCGD 218

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSS----------TSVPREVETLKELKTVMASC 462
            HT  +T  G+++ FG G+ G LG G+ S             VP+++E+L+ +  V  SC
Sbjct: 219 VHTMVLTDQGEIYCFGGGSCGQLGFGNISQMPLDVDSCPFMPVPKKIESLQGIFIVSLSC 278

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG---------HGDAEP-RVVPLC 512
           G  H+ A+                 ++ WG+   GQLG         + D +P +  P  
Sbjct: 279 GDSHSMALSREG------------HVYAWGEATYGQLGLDDIRDLPKNTDNKPYQPFPQK 326

Query: 513 VKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
           V    +     ++CG + T+ALT  G ++S G    GQLG
Sbjct: 327 VVALMNKKIVAISCGETHTLALTEGGHLYSFGGNTCGQLG 366


>gi|299469793|emb|CBN76647.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 2478

 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 186/413 (45%), Gaps = 35/413 (8%)

Query: 238 SSSSQGSCHEDFDGLGDVFIWGEGLGN-GLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           ++ S GSC        +  +W  G  + G LG +  G       R+   L K  E   V+
Sbjct: 214 ATPSGGSCLRACSSFHEREVWTCGQNSYGELGHSDTGT------RKTHCLVKPFEGREVV 267

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
           D   +A G++H VL+   G++++ G    G+ G G    V     +    G     V   
Sbjct: 268 D---VAAGNEHTVLLCSTGEVYTAGYNDNGQCGQGTTQRVGVLTRVPIDGGRKAVQVHAY 324

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G  HT  V   G + ++G   +  G LGQ +  S  +P+ V G + G++++   C  +H
Sbjct: 325 NGCEHTLVVLDDGQMMSFG--YNYRGQLGQGNTSSEPVPKPVRG-LNGIRVTQASCSYYH 381

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTA-AIVEV 473
           +      G+++TFG   FG LG GD     +P  VE+L+  +    +CG +HT  + +E+
Sbjct: 382 SVIACDNGEVYTFGRNDFGQLGSGDVIDRKLPCLVESLRGQRITTLACGQYHTVVSTLEI 441

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS-DDISFCKVACGHSITI 532
             ++ G N               GQLG    E +   + VK   D      V CG+  TI
Sbjct: 442 GVQSCGKNDY-------------GQLGLESTESQRKFVAVKGKLDGAQVRHVRCGYYHTI 488

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
            LTA   VF  G  DYGQLG   +T +   PT IEG  + +++  I+ G YH  ++ +  
Sbjct: 489 VLTAEEHVFGFGRNDYGQLGLGHTTQRVFGPTIIEG-AQEKHVYRISAGCYHTVLIDADG 547

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
            ++ +G+  +GQLG GD   + +P  V     K++  V  G  F   I L  G
Sbjct: 548 MLFVFGRNHHGQLGTGDTNERHSPFPVSTFLGKRIAKVAAG--FYHTIVLTGG 598



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 101/227 (44%), Gaps = 20/227 (8%)

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           +++T G  ++G LGH D  +      V+  +  + V  + G  HT  +            
Sbjct: 232 EVWTCGQNSYGELGHSDTGTRKTHCLVKPFEGREVVDVAAGNEHTVLLC----------- 280

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV----ACGHSITIALTATG 538
            S+ +++T G    GQ G G  +   V   V +       +V     C H  T+ +   G
Sbjct: 281 -STGEVYTAGYNDNGQCGQGTTQRVGVLTRVPIDGGRKAVQVHAYNGCEH--TLVVLDDG 337

Query: 539 QVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
           Q+ S G    GQLG   ++ +  P  + G +    +   +C  YH  +     EVYT+G+
Sbjct: 338 QMMSFGYNYRGQLGQGNTSSEPVPKPVRG-LNGIRVTQASCSYYHSVIACDNGEVYTFGR 396

Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
              GQLG GD  +++ P LVE+LR +++ ++ CG   T    L  GV
Sbjct: 397 NDFGQLGSGDVIDRKLPCLVESLRGQRITTLACGQYHTVVSTLEIGV 443


>gi|348682416|gb|EGZ22232.1| hypothetical protein PHYSODRAFT_330063 [Phytophthora sojae]
          Length = 2101

 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 177/385 (45%), Gaps = 52/385 (13%)

Query: 282  RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP-- 339
            R A  P+ L   V      IACG +H  L+T    ++++G G  G+LGHG + D + P  
Sbjct: 1734 RMASFPRPLRRVV-----QIACGYRHTALITDDRHLYTFGHGECGRLGHGNQEDCTEPVS 1788

Query: 340  -----KLIDA--LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI 392
                  LI+A  ++   +  V+CG  HT AVT SGDL+ +G G    G LG     S   
Sbjct: 1789 VGYFTSLIEAEGVDVGGVVEVSCGREHTMAVTASGDLFGFGWG--EAGRLGTGETGSSLY 1846

Query: 393  PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
            P +V+       I+++ CG  HT A+T  G++F FG G  G LG+G  +   +P  V+ L
Sbjct: 1847 PTRVTDLQ---NIAAVACGREHTLALTRKGRVFAFGAGFGGRLGNGSETDEELPFAVQGL 1903

Query: 453  KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD----AEPRV 508
            ++ +      G  H+ A+      T G        + TWG G+ G LGHGD     EPR 
Sbjct: 1904 EDYRIAAIDAGECHSCAL-----STEGD-------VLTWGFGSSGALGHGDRDNCLEPRR 1951

Query: 509  V--PLC--------VKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-----S 553
            +  P           + S+      +ACG   T+A T+ G ++  G A  GQL      +
Sbjct: 1952 IEGPWTGNAIDGEENQASETSVVSAIACGSYHTLAATSDGALYGWGDAAAGQLSVEYITA 2011

Query: 554  PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQT 613
            P      P RI     +  I  +ACG++  AV +++  ++ WG  A G     + ++ + 
Sbjct: 2012 PEMVVLTPQRIRVPT-NSGIRSVACGTFTSAVCTNQGHLFLWGSPAAGNGAPLEVDDARV 2070

Query: 614  PTLVEALRDKQVKSVVCGSNFTAAI 638
               +  L + +   V CG+    AI
Sbjct: 2071 KR-IGVLGEFEFSQVACGAYHAVAI 2094



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 141/308 (45%), Gaps = 36/308 (11%)

Query: 302  ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
            +CG +H + VT  G +F +G G  G+LG G      YP  +  L   NI  VACG  HT 
Sbjct: 1810 SCGREHTMAVTASGDLFGFGWGEAGRLGTGETGSSLYPTRVTDLQ--NIAAVACGREHTL 1867

Query: 362  AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
            A+T  G ++ +G G    G LG  SE    +P  V G +E  +I++I  G  H+ A+++ 
Sbjct: 1868 ALTRKGRVFAFGAGFG--GRLGNGSETDEELPFAVQG-LEDYRIAAIDAGECHSCALSTE 1924

Query: 422  GKLFTFGDGTFGALGHGDRSSTSVPREVE-------------TLKELKTVMA-SCGVWHT 467
            G + T+G G+ GALGHGDR +   PR +E                E   V A +CG +HT
Sbjct: 1925 GDVLTWGFGSSGALGHGDRDNCLEPRRIEGPWTGNAIDGEENQASETSVVSAIACGSYHT 1984

Query: 468  AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG--HGDAEPRVV--PLCVKVSDDISFCK 523
             A              S   L+ WGD A GQL   +  A   VV  P  ++V  +     
Sbjct: 1985 LA------------ATSDGALYGWGDAAAGQLSVEYITAPEMVVLTPQRIRVPTNSGIRS 2032

Query: 524  VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHI 583
            VACG   +   T  G +F  GS   G  G+P        +  G +       +ACG+YH 
Sbjct: 2033 VACGTFTSAVCTNQGHLFLWGSPAAGN-GAPLEVDDARVKRIGVLGEFEFSQVACGAYHA 2091

Query: 584  AVVSSKSE 591
              ++ K E
Sbjct: 2092 VAITRKLE 2099



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 137/317 (43%), Gaps = 43/317 (13%)

Query: 353  VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE--------ISHWIPRKVSGQMEGLQ 404
            +ACG  HT  +T    LYT+G G    G LG  ++        + ++     +  ++   
Sbjct: 1748 IACGYRHTALITDDRHLYTFGHG--ECGRLGHGNQEDCTEPVSVGYFTSLIEAEGVDVGG 1805

Query: 405  ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
            +  + CG  HT A+T++G LF FG G  G LG G+  S+  P  V  L+ +  V  +CG 
Sbjct: 1806 VVEVSCGREHTMAVTASGDLFGFGWGEAGRLGTGETGSSLYPTRVTDLQNIAAV--ACGR 1863

Query: 465  WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
             HT A+                ++F +G G  G+LG+G      +P  V+  +D     +
Sbjct: 1864 EHTLALTR------------KGRVFAFGAGFGGRLGNGSETDEELPFAVQGLEDYRIAAI 1911

Query: 525  ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIED-------- 575
              G   + AL+  G V + G    G LG         P RIEG      I+         
Sbjct: 1912 DAGECHSCALSTEGDVLTWGFGSSGALGHGDRDNCLEPRRIEGPWTGNAIDGEENQASET 1971

Query: 576  -----IACGSYHIAVVSSKSEVYTWGKGANGQLG----HGDNENKQTPTLVEALRDKQVK 626
                 IACGSYH    +S   +Y WG  A GQL             TP  +    +  ++
Sbjct: 1972 SVVSAIACGSYHTLAATSDGALYGWGDAAAGQLSVEYITAPEMVVLTPQRIRVPTNSGIR 2031

Query: 627  SVVCGSNFTAAICLHKG 643
            SV CG+ FT+A+C ++G
Sbjct: 2032 SVACGT-FTSAVCTNQG 2047



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 121/265 (45%), Gaps = 33/265 (12%)

Query: 290  LESTVVLDAQSIA---CGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
            L  T V D Q+IA   CG +H + +T++G++F++G G GG+LG+G E D   P  +  L 
Sbjct: 1845 LYPTRVTDLQNIAAVACGREHTLALTRKGRVFAFGAGFGGRLGNGSETDEELPFAVQGLE 1904

Query: 347  GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI- 405
               I  +  GE H+CA++  GD+ TWG G  + G LG     +   PR++ G   G  I 
Sbjct: 1905 DYRIAAIDAGECHSCALSTEGDVLTWGFG--SSGALGHGDRDNCLEPRRIEGPWTGNAID 1962

Query: 406  ------------SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
                        S+I CG +HT A TS G L+ +GD   G L        + P  V    
Sbjct: 1963 GEENQASETSVVSAIACGSYHTLAATSDGALYGWGDAAAGQLS---VEYITAPEMVVLTP 2019

Query: 454  ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ---LGHGDAEPRVVP 510
            +   V  + G+   A      G  + +   +   LF WG  A G    L   DA  +   
Sbjct: 2020 QRIRVPTNSGIRSVA-----CGTFTSAVCTNQGHLFLWGSPAAGNGAPLEVDDARVKR-- 2072

Query: 511  LCVKVSDDISFCKVACGHSITIALT 535
              + V  +  F +VACG    +A+T
Sbjct: 2073 --IGVLGEFEFSQVACGAYHAVAIT 2095


>gi|410906431|ref|XP_003966695.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Takifugu rubripes]
          Length = 726

 Score =  139 bits (350), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 170/339 (50%), Gaps = 29/339 (8%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           IACG +H  L+TK G++F +G  + G+LG G +  V+ P  + AL    + +VACG  HT
Sbjct: 41  IACGDEHTALITKNGRLFMFGSNNWGQLGLGSKRTVNKPTCVKALKTEKVLLVACGRNHT 100

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
              T  G +++ G        LG   E + +  +++        +  +  G   +AA+T 
Sbjct: 101 LICTAQGKVFSSGGNSEGQLGLGDCEERTTF--QRIHAFDSLGPVKMLAAGSNTSAALTE 158

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           +GKLF +GD T G +G    S    P+EV+    +  V  SCG +H+A +          
Sbjct: 159 SGKLFMWGDNTEGQIGLAKESHAPSPQEVDVGGPISWV--SCGYYHSAFVT--------- 207

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAE-PR-VVPLCVK-VSDDISFCKVACGHSITIALTAT 537
              +   L+T+G+   G+LG    + PR  VP  VK + + ++  +VACG   T+ALT  
Sbjct: 208 ---ADGALYTFGECDSGKLGLTTEQLPRHRVPQMVKSIKEPVT--QVACGGGHTVALTEE 262

Query: 538 GQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH---RYIEDIACGSYHIAVVSSKSEVYT 594
            ++F+ G   +GQLG    T  F +R+   ++H     +  +ACG  H AV++    +YT
Sbjct: 263 -RLFTFGLGQFGQLGH--GTFIFESRLPRPVEHFKKGRVCQVACGENHTAVITDGGLLYT 319

Query: 595 WGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCG 631
           +G G +G+LG G+    N+  PT+        V++  CG
Sbjct: 320 FGDGRHGKLGLGEENFTNQFKPTVCSRFLKYGVQAATCG 358



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 161/334 (48%), Gaps = 31/334 (9%)

Query: 263 GNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGE 322
           G   + G+ N  ++    +R    P  +++        +ACG  H ++ T QG++FS G 
Sbjct: 55  GRLFMFGSNNWGQLGLGSKRTVNKPTCVKALKTEKVLLVACGRNHTLICTAQGKVFSSGG 114

Query: 323 GSGGKLGHG-VEADVSYPKL--IDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNL 379
            S G+LG G  E   ++ ++   D+L    + M+A G   + A+T SG L+ WGD     
Sbjct: 115 NSEGQLGLGDCEERTTFQRIHAFDSL--GPVKMLAAGSNTSAALTESGKLFMWGDNTE-- 170

Query: 380 GLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGD 439
           G +G   E     P++V     G  IS + CG +H+A +T+ G L+TFG+   G LG   
Sbjct: 171 GQIGLAKESHAPSPQEVD---VGGPISWVSCGYYHSAFVTADGALYTFGECDSGKLGLTT 227

Query: 440 RS--STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEG 497
                  VP+ V+++KE  T +A CG  HT A+ E             ++LFT+G G  G
Sbjct: 228 EQLPRHRVPQMVKSIKEPVTQVA-CGGGHTVALTE-------------ERLFTFGLGQFG 273

Query: 498 QLGHGD--AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ--LGS 553
           QLGHG    E R +P  V+       C+VACG + T  +T  G +++ G   +G+  LG 
Sbjct: 274 QLGHGTFIFESR-LPRPVEHFKKGRVCQVACGENHTAVITDGGLLYTFGDGRHGKLGLGE 332

Query: 554 PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
              T +F   +        ++   CG  H+ V++
Sbjct: 333 ENFTNQFKPTVCSRFLKYGVQAATCGGCHMVVLA 366



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 141/291 (48%), Gaps = 25/291 (8%)

Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
           +ACG+ HT  +T +G L+ +G   +N G LG  S+ +   P  V   ++  ++  + CG 
Sbjct: 41  IACGDEHTALITKNGRLFMFGS--NNWGQLGLGSKRTVNKPTCVKA-LKTEKVLLVACGR 97

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV-MASCGVWHTAAIV 471
            HT   T+ GK+F+ G  + G LG GD    +  + +     L  V M + G   +AA+ 
Sbjct: 98  NHTLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQRIHAFDSLGPVKMLAAGSNTSAALT 157

Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
           E            S KLF WGD  EGQ+G         P  V V   IS+  V+CG+  +
Sbjct: 158 E------------SGKLFMWGDNTEGQIGLAKESHAPSPQEVDVGGPISW--VSCGYYHS 203

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPT-RIEGNIK--HRYIEDIACGSYHIAVVSS 588
             +TA G +++ G  D G+LG   +T + P  R+   +K     +  +ACG  H  V  +
Sbjct: 204 AFVTADGALYTFGECDSGKLGL--TTEQLPRHRVPQMVKSIKEPVTQVACGGGH-TVALT 260

Query: 589 KSEVYTWGKGANGQLGHGDN-ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  ++T+G G  GQLGHG      + P  VE  +  +V  V CG N TA I
Sbjct: 261 EERLFTFGLGQFGQLGHGTFIFESRLPRPVEHFKKGRVCQVACGENHTAVI 311



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 4/132 (3%)

Query: 509 VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGN 567
           +P    + +D+   K+ACG   T  +T  G++F  GS ++GQLG     T   PT ++  
Sbjct: 27  IPSKFWLKNDVPL-KIACGDEHTALITKNGRLFMFGSNNWGQLGLGSKRTVNKPTCVKA- 84

Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRD-KQVK 626
           +K   +  +ACG  H  + +++ +V++ G  + GQLG GD E + T   + A      VK
Sbjct: 85  LKTEKVLLVACGRNHTLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQRIHAFDSLGPVK 144

Query: 627 SVVCGSNFTAAI 638
            +  GSN +AA+
Sbjct: 145 MLAAGSNTSAAL 156



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 11/110 (10%)

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
           +  TG VF+ G + +            P++    +K+     IACG  H A+++    ++
Sbjct: 9   IPETGAVFTFGKSKFAD--------NIPSKFW--LKNDVPLKIACGDEHTALITKNGRLF 58

Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
            +G    GQLG G       PT V+AL+ ++V  V CG N T  IC  +G
Sbjct: 59  MFGSNNWGQLGLGSKRTVNKPTCVKALKTEKVLLVACGRNHT-LICTAQG 107


>gi|340502738|gb|EGR29393.1| rcc1 family hect domain protein, putative [Ichthyophthirius
           multifiliis]
          Length = 879

 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 142/306 (46%), Gaps = 43/306 (14%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + + CG KH V +T++G+I+S+G G  G LGHG       PK I   N   I  + CGEF
Sbjct: 99  KKMVCGKKHTVFITEEGKIYSYGIGEYGSLGHGGLIYSDIPKNIIKFNQKKIIQITCGEF 158

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ----------ISSI 408
           HT A+T + DLY+WG G    G LG   + + + P  VS   +             +  I
Sbjct: 159 HTLALTDTYDLYSWGRGFE--GQLGTGKDCASF-PCYVSIFYQKYDYENKKDQKKIVKYI 215

Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--------ETLKELKTVMA 460
            CG +H+ AI+  G L+ +G+   G  G+G   S   P+ V        E + E K +  
Sbjct: 216 ACGAYHSLAISDDGILYAWGEARLGQTGNGKSKSEKYPKIVNFGNNLKEENILEDKIICV 275

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI- 519
           S G  H+AA++E            S +L+TWG    GQLGHG  +    P   KV  DI 
Sbjct: 276 SGGYGHSAAVLE------------SGELYTWGLNFNGQLGHGSIKSSYFP--QKVVKDIL 321

Query: 520 -----SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIE 574
                 F  V CG++ T A+   GQ++S G  + G   +       P +I  N ++R   
Sbjct: 322 GNNIPLFKTVQCGYNNTFAIDINGQLWSWGGGNLGHKNN--HFQDLPRKITQNTQNRKFS 379

Query: 575 DIACGS 580
           +I   S
Sbjct: 380 EIHATS 385



 Score =  116 bits (291), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 129/261 (49%), Gaps = 36/261 (13%)

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
           QI  + CG  HT  IT  GK++++G G +G+LGHG    + +P+ +    + K +  +CG
Sbjct: 97  QIKKMVCGKKHTVFITEEGKIYSYGIGEYGSLGHGGLIYSDIPKNIIKFNQKKIIQITCG 156

Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV-------- 515
            +HT A+ +            +  L++WG G EGQLG G  +    P  V +        
Sbjct: 157 EFHTLALTD------------TYDLYSWGRGFEGQLGTG-KDCASFPCYVSIFYQKYDYE 203

Query: 516 --SDDISFCK-VACGHSITIALTATGQVFSMGSADYGQLGSPGS-TGKFPTRIE--GNIK 569
              D     K +ACG   ++A++  G +++ G A  GQ G+  S + K+P  +    N+K
Sbjct: 204 NKKDQKKIVKYIACGAYHSLAISDDGILYAWGEARLGQTGNGKSKSEKYPKIVNFGNNLK 263

Query: 570 HRYI--EDIAC--GSY-HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPT-LVEALRDK 623
              I  + I C  G Y H A V    E+YTWG   NGQLGHG  ++   P  +V+ +   
Sbjct: 264 EENILEDKIICVSGGYGHSAAVLESGELYTWGLNFNGQLGHGSIKSSYFPQKVVKDILGN 323

Query: 624 QV---KSVVCGSNFTAAICLH 641
            +   K+V CG N T AI ++
Sbjct: 324 NIPLFKTVQCGYNNTFAIDIN 344



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 135/289 (46%), Gaps = 44/289 (15%)

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
           I  + CG+ HT  +T  G +Y++G G +  G LG    I   IP+ +  +    +I  I 
Sbjct: 98  IKKMVCGKKHTVFITEEGKIYSYGIGEY--GSLGHGGLIYSDIPKNII-KFNQKKIIQIT 154

Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVP---------REVETLKELKTVM- 459
           CG +HT A+T    L+++G G  G LG G +   S P          + E  K+ K ++ 
Sbjct: 155 CGEFHTLALTDTYDLYSWGRGFEGQLGTG-KDCASFPCYVSIFYQKYDYENKKDQKKIVK 213

Query: 460 -ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV--- 515
             +CG +H+ AI +        +G+    L+ WG+   GQ G+G ++    P  V     
Sbjct: 214 YIACGAYHSLAISD--------DGI----LYAWGEARLGQTGNGKSKSEKYPKIVNFGNN 261

Query: 516 --SDDISFCKVAC---GHSITIALTATGQVFSMGSADYGQLGSPGS--TGKFPTRIEGNI 568
              ++I   K+ C   G+  + A+  +G++++ G    GQLG  GS  +  FP ++  +I
Sbjct: 262 LKEENILEDKIICVSGGYGHSAAVLESGELYTWGLNFNGQLGH-GSIKSSYFPQKVVKDI 320

Query: 569 KHRYI---EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
               I   + + CG  +   +    ++++WG    G LGH +N  +  P
Sbjct: 321 LGNNIPLFKTVQCGYNNTFAIDINGQLWSWG---GGNLGHKNNHFQDLP 366


>gi|170578406|ref|XP_001894395.1| hypothetical protein [Brugia malayi]
 gi|158599034|gb|EDP36761.1| conserved hypothetical protein [Brugia malayi]
          Length = 988

 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 195/389 (50%), Gaps = 45/389 (11%)

Query: 263 GNGLLGGAVNGVEISSADRRDALLPKVL------ESTVVLDAQSIACGSKHAVLVTKQGQ 316
           G+G LG   + VE   +D +  ++P+++      ++ V++  +SIA G +H + ++  G+
Sbjct: 13  GDGQLGFRPDSVE---SDAQMMIVPRLVYGAPTRQNGVIV--KSIASGERHTLFLSDDGK 67

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGS-NIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++S G    G+LG G   + SY      ++ + +I  ++ G  H+ AV+  G L+ WG  
Sbjct: 68  VWSCGSNYNGELGRGGVREGSYTIYPVHISSTVSIIQISAGRSHSMAVSDDGRLFAWGSN 127

Query: 376 IH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
            H  L + G +  ++   P++V    E +Q++   CG  HT ++   G++F +G  + G 
Sbjct: 128 SHGQLAMSGDI--LASDTPKRVPSLPETVQVA---CGASHTVSLNGGGRVFIWGQQSDGR 182

Query: 435 LGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG 494
           + H        P EVE    +  V  S G   T A+             +S  LF WG  
Sbjct: 183 IRHS-------PAEVEIFISIPIVQISAGNLFTMALT------------ASGTLFAWGKN 223

Query: 495 AEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSP 554
            EGQLG    +  V P  V   +  S   V CG S +IALT  G+VFS GS  +GQLG  
Sbjct: 224 EEGQLGDFTNKDVVNPCAVPNIN--SVVAVECGDSHSIALTHEGRVFSCGSDSFGQLGC- 280

Query: 555 GSTGKFPTRIEG--NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
           G   +    + G   +   ++  IACG  H  VV++  +++T+G  +NGQLGHG+  N+ 
Sbjct: 281 GQPNRSQNCMRGITEMLGSHVTRIACGRCHTIVVAN-GKMHTFGLNSNGQLGHGNTRNQI 339

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAICLH 641
           TP +++++ +  V SV  G + +  + +H
Sbjct: 340 TPRVIDSVEN--VASVFAGWDQSFCLQIH 366



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 24/230 (10%)

Query: 232 SLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE 291
           SL   V  +   S     +G G VFIWG+                  +D R    P  +E
Sbjct: 149 SLPETVQVACGASHTVSLNGGGRVFIWGQ-----------------QSDGRIRHSPAEVE 191

Query: 292 STVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH 351
             + +    I+ G+   + +T  G +F+WG+   G+LG     DV  P  +  +N  ++ 
Sbjct: 192 IFISIPIVQISAGNLFTMALTASGTLFAWGKNEEGQLGDFTNKDVVNPCAVPNIN--SVV 249

Query: 352 MVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC 410
            V CG+ H+ A+T  G +++ G D    LG  GQ +  S    R ++ +M G  ++ I C
Sbjct: 250 AVECGDSHSIALTHEGRVFSCGSDSFGQLG-CGQPNR-SQNCMRGIT-EMLGSHVTRIAC 306

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
           G  HT  + + GK+ TFG  + G LGHG+  +   PR +++++ + +V A
Sbjct: 307 GRCHTIVVAN-GKMHTFGLNSNGQLGHGNTRNQITPRVIDSVENVASVFA 355


>gi|325186780|emb|CCA21326.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 954

 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 173/378 (45%), Gaps = 51/378 (13%)

Query: 295 VLDAQSIA---CGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-----VSYPKLID--- 343
           VL  QSIA   CG  H + ++  G ++S  +       H +        +  P+L+    
Sbjct: 236 VLPGQSIAEIACGGNHILYLSSAGDVYSSED-------HAISTTEPTNMLQTPQLVKELT 288

Query: 344 ---ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM 400
              AL+   I  +ACG  H+ A+T +G++Y+WG G    G LG        +PRK+   +
Sbjct: 289 LEKALHRRPIIHIACGAKHSVALTSAGEVYSWGSG--EDGRLGHGEMRDRNVPRKIMALL 346

Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET--LKELKTV 458
              +I  + CG  HTA ++    +FTFG G  G LG GD      P+EV T   ++ + +
Sbjct: 347 RH-RIEYVSCGGSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHDTPQEVPTWGFRKQRII 405

Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA-EPRVVPLCVKVSD 517
              CG W+    + + G+           +F+WG  +EGQ G G   +  + P  ++   
Sbjct: 406 KVVCG-WNFTIALSLEGR-----------VFSWGKQSEGQCGLGFCDQDELSPCLIEKLL 453

Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLG-------SPGSTGKFPTRIEGNIKH 570
           D     VACG++ ++ALT+  +V S G  +YGQLG       SP S  +     EG    
Sbjct: 454 DNRIVDVACGYTHSLALTSQHEVLSWGLGEYGQLGRGIVYQPSPESIDQSLFACEGGHPQ 513

Query: 571 RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVV- 629
           R    I CG++H  + +    +Y WG  + G  G G   N+  P   +   +     V+ 
Sbjct: 514 R----IYCGAFHSIITAGSKILYAWGLNSYGACGLGHTLNRDIPERNDFFANIDTDVVLC 569

Query: 630 CGSNFTAAICLHKGVSIA 647
           CG  +T A+ + K  S++
Sbjct: 570 CGHKYTIALEVDKVPSVS 587



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 147/308 (47%), Gaps = 34/308 (11%)

Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
           L  K  ++F WG   G    + +      P+ +D L G +I  +ACG  H   ++ +GD+
Sbjct: 206 LDQKCARVFLWGRPPGWSHTNSLLT----PQKVDVLPGQSIAEIACGGNHILYLSSAGDV 261

Query: 370 YTWGDGIHNLGLLGQVSEISHWIPRKV-----SGQMEGLQISSICCGPWHTAAITSAGKL 424
           Y+  D  H +      + +    P+ V        +    I  I CG  H+ A+TSAG++
Sbjct: 262 YSSED--HAISTTEPTNMLQ--TPQLVKELTLEKALHRRPIIHIACGAKHSVALTSAGEV 317

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           +++G G  G LGHG+    +VPR++  L   +    SCG  HTA + +            
Sbjct: 318 YSWGSGEDGRLGHGEMRDRNVPRKIMALLRHRIEYVSCGGSHTAVVSD------------ 365

Query: 485 SKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
              +FT+G G  G+LG GD +    P+ VP        I   KV CG + TIAL+  G+V
Sbjct: 366 QNLVFTFGRGRNGRLGLGDTKCHDTPQEVPTWGFRKQRI--IKVVCGWNFTIALSLEGRV 423

Query: 541 FSMGSADYGQ--LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           FS G    GQ  LG        P  IE  + +R I D+ACG  H   ++S+ EV +WG G
Sbjct: 424 FSWGKQSEGQCGLGFCDQDELSPCLIEKLLDNR-IVDVACGYTHSLALTSQHEVLSWGLG 482

Query: 599 ANGQLGHG 606
             GQLG G
Sbjct: 483 EYGQLGRG 490



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 130/294 (44%), Gaps = 42/294 (14%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+V+ WG G  +G LG           + RD  +P+ + + +    + ++CG  H  +V+
Sbjct: 315 GEVYSWGSG-EDGRLG---------HGEMRDRNVPRKIMALLRHRIEYVSCGGSHTAVVS 364

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA--LNGSNIHMVACGEFHTCAVTLSGDLY 370
            Q  +F++G G  G+LG G       P+ +         I  V CG   T A++L G ++
Sbjct: 365 DQNLVFTFGRGRNGRLGLGDTKCHDTPQEVPTWGFRKQRIIKVVCGWNFTIALSLEGRVF 424

Query: 371 TWG---DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           +WG   +G   LG   Q  E+S  +  K+       +I  + CG  H+ A+TS  ++ ++
Sbjct: 425 SWGKQSEGQCGLGFCDQ-DELSPCLIEKLLDN----RIVDVACGYTHSLALTSQHEVLSW 479

Query: 428 GDGTFGALGHG---DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           G G +G LG G     S  S+ + +   +        CG +H+   +  AG         
Sbjct: 480 GLGEYGQLGRGIVYQPSPESIDQSLFACEGGHPQRIYCGAFHS---IITAG--------- 527

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVP----LCVKVSDDISFCKVACGHSITIAL 534
           SK L+ WG  + G  G G    R +P        +  D+  C   CGH  TIAL
Sbjct: 528 SKILYAWGLNSYGACGLGHTLNRDIPERNDFFANIDTDVVLC---CGHKYTIAL 578



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 12/158 (7%)

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           ++F WG       G       + P  V V    S  ++ACG +  + L++ G V+S  S 
Sbjct: 212 RVFLWGRPP----GWSHTNSLLTPQKVDVLPGQSIAEIACGGNHILYLSSAGDVYS--SE 265

Query: 547 DYG-QLGSPGSTGKFPTRI-----EGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
           D+      P +  + P  +     E  +  R I  IACG+ H   ++S  EVY+WG G +
Sbjct: 266 DHAISTTEPTNMLQTPQLVKELTLEKALHRRPIIHIACGAKHSVALTSAGEVYSWGSGED 325

Query: 601 GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G+LGHG+  ++  P  + AL   +++ V CG + TA +
Sbjct: 326 GRLGHGEMRDRNVPRKIMALLRHRIEYVSCGGSHTAVV 363



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 17/200 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG+        G  +  E+S       L+ K+L++ +V     +ACG  H++ +T
Sbjct: 421 GRVFSWGKQSEGQCGLGFCDQDELSPC-----LIEKLLDNRIV----DVACGYTHSLALT 471

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLID----ALNGSNIHMVACGEFHTCAVTLSGD 368
            Q ++ SWG G  G+LG G+    S P+ ID    A  G +   + CG FH+     S  
Sbjct: 472 SQHEVLSWGLGEYGQLGRGIVYQPS-PESIDQSLFACEGGHPQRIYCGAFHSIITAGSKI 530

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           LY W  G+++ G  G    ++  IP +            +CCG  +T A+    K+ +  
Sbjct: 531 LYAW--GLNSYGACGLGHTLNRDIPERNDFFANIDTDVVLCCGHKYTIAL-EVDKVPSVS 587

Query: 429 DGTFGALGHGDRSSTSVPRE 448
             +FG       SS+++  E
Sbjct: 588 ADSFGNTFENASSSSNLHME 607


>gi|47214261|emb|CAG01938.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1055

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 163/343 (47%), Gaps = 50/343 (14%)

Query: 296 LDAQSI---ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV-EADVSYPKLIDALNGSNIH 351
           LD Q I   +CG  H++ V +QGQ+F+WG G GG+LG G  EA V  P+LI  L    I 
Sbjct: 80  LDTQRITLVSCGQAHSMAVNEQGQVFAWGAGDGGQLGLGTTEAAVRIPRLIKRLCDHRIA 139

Query: 352 MVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCG 411
            V CG  H  A++  G L+TWG        LG+  E S   P+ +   + G+ ++ I  G
Sbjct: 140 QVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGK-GEPSKLFPQPLKS-LAGIPLAKITAG 197

Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIV 471
             H+ A++ +G +F +G    G LG  D    +VP  ++ L+  K V  SCG  HTAA+ 
Sbjct: 198 GDHSFALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGDEHTAALT 257

Query: 472 EV-------AGKTSG---SNGLSSKK--------------------LFTWGDGAEGQLGH 501
           +V         +TSG   SN    ++                    LFT+GDG+ GQLGH
Sbjct: 258 KVRIRSASQCFRTSGGRCSNPFFCQRIGCSHSTRVTILLWLFQDGGLFTFGDGSWGQLGH 317

Query: 502 GDAEPRVVPLCVKVSDDISFCKVACGHSITIALT-ATGQVFSMGSADYGQLGSPGSTGK- 559
           G     ++P  V         ++ CG   T+A   ++G V++ G   +GQLG+   + + 
Sbjct: 318 GSTSNELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGVVYAFGGNSHGQLGTGELSAEK 377

Query: 560 --FPTRIE---GNIKHRY------IEDIACGSYHIAVVSSKSE 591
             +P +I    GN  HR       +  I CG  H  ++ S  +
Sbjct: 378 CLYPVKINLLSGN-NHRTDSKKYSVTKITCGGDHSFLLYSNEQ 419



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 158/378 (41%), Gaps = 66/378 (17%)

Query: 317 IFSWGEGSGGKLGHGVEADVSY-PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-D 374
           +  WG+   G+LG  VE +  + P+  +  +G  +    CG  H+  +   G +YT G +
Sbjct: 1   MLCWGKAKDGQLGIEVERNSMFEPRNCNVFSGRGLKEAVCGGQHSVFLLHDGSVYTCGSN 60

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
           G       GQ+         ++ G ++  +I+ + CG  H+ A+   G++F +G G  G 
Sbjct: 61  GC------GQLGHNKPGTSPELVGALDTQRITLVSCGQAHSMAVNEQGQVFAWGAGDGGQ 114

Query: 435 LGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG G   ++  +PR ++ L + +     CG  H  A+ +              +LFTWG 
Sbjct: 115 LGLGTTEAAVRIPRLIKRLCDHRIAQVMCGNQHCIALSK------------DGQLFTWGQ 162

Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G  EP ++ P  +K    I   K+  G   + AL+ +G VF  G    GQLG
Sbjct: 163 NTSGQLGLGKGEPSKLFPQPLKSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQLG 222

Query: 553 SPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVS-----SKSE--------------- 591
                 +  P  I+  ++ + +  I+CG  H A ++     S S+               
Sbjct: 223 LNDIQDRAVPCHIK-FLRSQKVVHISCGDEHTAALTKVRIRSASQCFRTSGGRCSNPFFC 281

Query: 592 ----------------------VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVV 629
                                 ++T+G G+ GQLGHG   N+  P  V  L   +V  + 
Sbjct: 282 QRIGCSHSTRVTILLWLFQDGGLFTFGDGSWGQLGHGSTSNELLPRRVLELMGTEVSQIT 341

Query: 630 CGSNFTAAICLHKGVSIA 647
           CG + T A     GV  A
Sbjct: 342 CGRHHTLAFAPSSGVVYA 359



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 153/362 (42%), Gaps = 84/362 (23%)

Query: 227 DSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALL 286
           D+ RI+L S   + S     +     G VF WG G G  L      G+  + A  R   +
Sbjct: 81  DTQRITLVSCGQAHSMAVNEQ-----GQVFAWGAGDGGQL------GLGTTEAAVR---I 126

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV-EADVSYPKLIDAL 345
           P++++         + CG++H + ++K GQ+F+WG+ + G+LG G  E    +P+ + +L
Sbjct: 127 PRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNTSGQLGLGKGEPSKLFPQPLKSL 186

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
            G  +  +  G  H+ A++LSG ++ WG   +  G LG        +P  +   +   ++
Sbjct: 187 AGIPLAKITAGGDHSFALSLSGAVFGWGK--NKAGQLGLNDIQDRAVPCHIKF-LRSQKV 243

Query: 406 SSICCGPWHTAAITSA------------------------------------------GK 423
             I CG  HTAA+T                                            G 
Sbjct: 244 VHISCGDEHTAALTKVRIRSASQCFRTSGGRCSNPFFCQRIGCSHSTRVTILLWLFQDGG 303

Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
           LFTFGDG++G LGHG  S+  +PR V  L   +    +CG  HT A              
Sbjct: 304 LFTFGDGSWGQLGHGSTSNELLPRRVLELMGTEVSQITCGRHHTLAFAP----------- 352

Query: 484 SSKKLFTWGDGAEGQLGHGD--AEPRVVPLCVKV---------SDDISFCKVACG--HSI 530
           SS  ++ +G  + GQLG G+  AE  + P+ + +         S   S  K+ CG  HS 
Sbjct: 353 SSGVVYAFGGNSHGQLGTGELSAEKCLYPVKINLLSGNNHRTDSKKYSVTKITCGGDHSF 412

Query: 531 TI 532
            +
Sbjct: 413 LL 414


>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1185

 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 198/405 (48%), Gaps = 36/405 (8%)

Query: 249 FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           F+ L D+    E   +G LG  + G+  + A  R    P+ LE+   L     A G +H+
Sbjct: 139 FENLSDI---PEPQSHGWLG--IAGMYFTWAPGRRQ--PRRLEAGTGLKLLKAASGERHS 191

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           +L+    +++S G+ S G+LG         P+ I AL+  +I +V+CG+ H+ AV   G 
Sbjct: 192 LLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGR 251

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           ++TWG G      +G+  EIS ++P K++  + G++I  + CG +H+ A++  G++F++G
Sbjct: 252 VFTWGAGSEGQLGIGESKEIS-FMPTKINS-LAGIKIIQVSCGHYHSLALSEDGQVFSWG 309

Query: 429 DGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
               G LG G+   S + P++V++L+ +     + G  H+ A+  + G +          
Sbjct: 310 SNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFAL-SLMGTS---------- 358

Query: 488 LFTWGDGAEGQL---GHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            F WG+   GQL   G+   E    P  +     ++   ++CG+  T  LT  GQVF+ G
Sbjct: 359 -FGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFG 417

Query: 545 SADYGQL-GSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN-- 600
            +   QL  SP S    P  IEG   H  +  I CGSYH IA V +  +V + G+G +  
Sbjct: 418 GSSSEQLQHSPRSGRGGPQLIEGIGGH--VSQIECGSYHTIAYVYTTGQVVSLGRGPSCT 475

Query: 601 GQLGHGDNENKQTPTLVEA--LRDKQVKSVVCG--SNFTAAICLH 641
               H +        L+ A  L D +VK +  G  +NF    C H
Sbjct: 476 SNATHQEAACSDVTCLLSAKDLVDIEVKDIFAGAHANFVTT-CRH 519


>gi|334329483|ref|XP_003341232.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Monodelphis domestica]
          Length = 1170

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 165/339 (48%), Gaps = 29/339 (8%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H  L+T   +++ +G  + G+LG G +  V+ P  + AL    + + ACG  HT
Sbjct: 40  LSCGDEHTALITGNSKLYMFGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKIAACGRNHT 99

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
              T  G +Y  G        LG   E + +  + VS      +I  +  G   +AA+T 
Sbjct: 100 LVYTEEGKVYAAGGNSEGQLGLGDTEERTTF--QLVSFFTAQHKIKQLSAGSNTSAALTE 157

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            G LF +GD + G +G  + ++  VP EV   K +  +  SCG +H+A +      T G 
Sbjct: 158 DGVLFMWGDNSEGQIGLAEEANVCVPSEVTIGKPISWI--SCGYYHSAFVT-----TEG- 209

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAE---PRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
                 +L+T+G+   G+LG    +    R+  L + +   ++  +VACG   T+ALT  
Sbjct: 210 ------ELYTFGEPENGKLGLSPEQLKNHRIPQLVLGIPGKVN--QVACGGGHTVALTEE 261

Query: 538 GQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH---RYIEDIACGSYHIAVVSSKSEVYT 594
            +V++ G   +GQLG    T  F T     +KH   + I+ IACG  H A++S    +YT
Sbjct: 262 -EVYTFGLGQFGQLGL--GTFIFETSEPKVVKHLQNQKIQYIACGENHTALISDTGHMYT 318

Query: 595 WGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCG 631
           +G G +G+LG G     N+  PTL        V+ V CG
Sbjct: 319 FGDGRHGKLGLGQENFTNQFVPTLCSNFLKFIVRLVACG 357



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 129/276 (46%), Gaps = 50/276 (18%)

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
           + CG  HTA IT   KL+ FG   +G LG G +++ + P  V+ LK  K  +A+CG  HT
Sbjct: 40  LSCGDEHTALITGNSKLYMFGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKIAACGRNHT 99

Query: 468 AAIVE------VAGKTSGSNGLSSKK---------------------------------- 487
               E        G + G  GL   +                                  
Sbjct: 100 LVYTEEGKVYAAGGNSEGQLGLGDTEERTTFQLVSFFTAQHKIKQLSAGSNTSAALTEDG 159

Query: 488 -LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
            LF WGD +EGQ+G  +     VP  V +   IS+  ++CG+  +  +T  G++++ G  
Sbjct: 160 VLFMWGDNSEGQIGLAEEANVCVPSEVTIGKPISW--ISCGYYHSAFVTTEGELYTFGEP 217

Query: 547 DYGQLG-SPGS--TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           + G+LG SP      + P  + G I  + +  +ACG  H  V  ++ EVYT+G G  GQL
Sbjct: 218 ENGKLGLSPEQLKNHRIPQLVLG-IPGK-VNQVACGGGH-TVALTEEEVYTFGLGQFGQL 274

Query: 604 GHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAAI 638
           G G    + + P +V+ L++++++ + CG N TA I
Sbjct: 275 GLGTFIFETSEPKVVKHLQNQKIQYIACGENHTALI 310



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 108/218 (49%), Gaps = 20/218 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F+WG+    G +G          A+  +  +P   E T+      I+CG  H+  VT
Sbjct: 159 GVLFMWGDN-SEGQIG---------LAEEANVCVPS--EVTIGKPISWISCGYYHSAFVT 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
            +G+++++GE   GKLG   E   ++  P+L+  + G  ++ VACG  HT A+T   ++Y
Sbjct: 207 TEGELYTFGEPENGKLGLSPEQLKNHRIPQLVLGIPGK-VNQVACGGGHTVALT-EEEVY 264

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           T+G G    G LG  + I      KV   ++  +I  I CG  HTA I+  G ++TFGDG
Sbjct: 265 TFGLG--QFGQLGLGTFIFETSEPKVVKHLQNQKIQYIACGENHTALISDTGHMYTFGDG 322

Query: 431 TFGALGHGDRSSTS--VPREVETLKELKTVMASCGVWH 466
             G LG G  + T+  VP       +    + +CG  H
Sbjct: 323 RHGKLGLGQENFTNQFVPTLCSNFLKFIVRLVACGGCH 360



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 10/99 (10%)

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           +G VF+ G + + +          P++    +K+     ++CG  H A+++  S++Y +G
Sbjct: 11  SGAVFTFGKSKFAE--------NIPSKFW--LKNDIPAYLSCGDEHTALITGNSKLYMFG 60

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
               GQLG G       PT V+AL+ ++VK   CG N T
Sbjct: 61  SNNWGQLGLGSKTTVNKPTCVKALKPEKVKIAACGRNHT 99


>gi|313221390|emb|CBY32143.1| unnamed protein product [Oikopleura dioica]
          Length = 560

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 194/419 (46%), Gaps = 40/419 (9%)

Query: 225 TADSFRISLSSAVSSSSQGSCHEDFDGLG-----DVFIWGEGLGNGLLGGAVNGVEISSA 279
           TAD   +++ S+++++S   C++     G     +VF WG            +  +++ A
Sbjct: 99  TADQSALTILSSIAAAS---CNDGGTNGGPSFADEVFCWGSN----------SSQQLTDA 145

Query: 280 DRRDALL-PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY 338
              D LL P+ L  +V     SI  G      V   G + + G+GS G+LG+G  A  S 
Sbjct: 146 TPEDKLLYPRNL--SVYGKVMSITAGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSS 203

Query: 339 PKLIDALNGSNIHMVACG-EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
           P LI+        + + G + H+ A+  +G ++TWGDG  + G LG     +   P+ + 
Sbjct: 204 PILIEFPAPVRKILTSKGSDGHSMAIGKNGQIWTWGDG--DYGKLGHGDSTTQKSPKLIE 261

Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
             +    I    CG  H+AA+  AG L+ +G+G +G LG GD    SVP +V  ++E   
Sbjct: 262 A-LASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIREASQ 320

Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
           V+  CG  HT  ++   G+T          ++++G    G+LGHGD   +  P  +    
Sbjct: 321 VV--CGFNHTV-VLSTDGRT----------VWSFGAAENGKLGHGDTNRQFRPKIIDALQ 367

Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIA 577
            ++  ++A G  I+ A+T  G ++  G       GS   T   P  + G +  R + DIA
Sbjct: 368 GLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSDETFMLPKVVRG-LSGRVVIDIA 426

Query: 578 CGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQT-PTLVEALRDKQVKSVVCGSNFT 635
            G  H+  ++    V+TWG   NGQ G G      T P +V+ L    ++ V  G+  T
Sbjct: 427 IGENHVVALTKDGLVFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHT 485



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 137/286 (47%), Gaps = 24/286 (8%)

Query: 307 HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
           H++ + K GQI++WG+G  GKLGHG       PKLI+AL    I    CG  H+ AV  +
Sbjct: 225 HSMAIGKNGQIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDA 284

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGK-LF 425
           G LY WG+G  + G LG    +   +P +V    E    S + CG  HT  +++ G+ ++
Sbjct: 285 GHLYMWGEG--DYGRLGLGDALQRSVPVQVPDIREA---SQVVCGFNHTVVLSTDGRTVW 339

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
           +FG    G LGHGD +    P+ ++ L+ L     + G   +AA+               
Sbjct: 340 SFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAVTR------------E 387

Query: 486 KKLFTWGDGAEGQLGHGDA-EPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
             L+ WG G    LG+G + E  ++P  V+         +A G +  +ALT  G VF+ G
Sbjct: 388 GALYVWGFGP--CLGNGSSDETFMLPKVVRGLSGRVVIDIAIGENHVVALTKDGLVFTWG 445

Query: 545 SADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSS 588
           +   GQ G+      +  P  ++G +    I+ +  G+ H  V S+
Sbjct: 446 NNQNGQCGTGSGMATYTSPQMVQG-LHGAGIQQVTAGTTHTFVWSA 490



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 124/254 (48%), Gaps = 18/254 (7%)

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
           ++ SI  G + T A+ S G +   G G++G LG+G  +S+S P  +E    ++ ++ S G
Sbjct: 162 KVMSITAGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSPILIEFPAPVRKILTSKG 221

Query: 464 V-WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
              H+ AI        G NG    +++TWGDG  G+LGHGD+  +  P  ++        
Sbjct: 222 SDGHSMAI--------GKNG----QIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVIV 269

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSY 581
              CGH  + A+   G ++  G  DYG+LG   +  +  P ++      R    + CG  
Sbjct: 270 DADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSVPVQVP---DIREASQVVCGFN 326

Query: 582 HIAVVSSKSE-VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           H  V+S+    V+++G   NG+LGHGD   +  P +++AL+   +  +  G+  +AA+  
Sbjct: 327 HTVVLSTDGRTVWSFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAVTR 386

Query: 641 HKGVSIADHSICSG 654
              + +     C G
Sbjct: 387 EGALYVWGFGPCLG 400



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 6/165 (3%)

Query: 479 GSNGLSS--KKLFTWGDGAEGQLGHGDAEPRVV-PLCVKVSDDISFCKVACGHSITIALT 535
           G+NG  S   ++F WG  +  QL     E +++ P  + V   +    +  G   T A+ 
Sbjct: 120 GTNGGPSFADEVFCWGSNSSQQLTDATPEDKLLYPRNLSVYGKV--MSITAGQYCTFAVL 177

Query: 536 ATGQVFSMGSADYGQLGS-PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
           + G V + G   YG+LG+   ++   P  IE     R I        H   +    +++T
Sbjct: 178 SNGTVMANGKGSYGRLGNGASASSSSPILIEFPAPVRKILTSKGSDGHSMAIGKNGQIWT 237

Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
           WG G  G+LGHGD+  +++P L+EAL  + +    CG   +AA+C
Sbjct: 238 WGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVC 282


>gi|7406983|gb|AAF61856.1|AF189221_1 HERC2 [Drosophila melanogaster]
          Length = 743

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 125/246 (50%), Gaps = 14/246 (5%)

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           K+   + G+ ++ I CG  H+AAIT++G + T+G G +G LGHGD      P+ VE L  
Sbjct: 11  KLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLG 70

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
            + +  +CG          +G            +++WGDG  G+LG G ++   +P  ++
Sbjct: 71  YRAIDIACG----------SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIE 120

Query: 515 VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHRY 572
               +   KV CG   ++ALT +G V++ G  D+ +LG  GS    + P ++   ++ + 
Sbjct: 121 SLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGH-GSVDHVRRPKKVAA-LQGKK 178

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
           I  IA GS H    S   EVYTWG    GQLG G     Q P LV AL+ K +  V CGS
Sbjct: 179 IISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQWPRLVTALQGKHIVKVTCGS 238

Query: 633 NFTAAI 638
             T A+
Sbjct: 239 AHTLAL 244



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 126/253 (49%), Gaps = 17/253 (6%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           PK++E    +    IACGS H+  +T  G + +WG+G  G+LGHG   D   PKL++AL 
Sbjct: 10  PKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALL 69

Query: 347 GSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           G     +AC  G+  T  +T   ++++WGDG  + G LG+       +P K+   + GL 
Sbjct: 70  GYRAIDIACGSGDAQTLCITDDDNVWSWGDG--DYGKLGRGGSDGCKLPYKIE-SLAGLG 126

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +  + CG   + A+T +G ++T+G G F  LGHG       P++V  L+  K +  + G 
Sbjct: 127 VVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGS 186

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
            H  A  +            S +++TWGD  EGQLG G       P  V         KV
Sbjct: 187 LHCVACSD------------SGEVYTWGDNDEGQLGDGTVTAIQWPRLVTALQGKHIVKV 234

Query: 525 ACGHSITIALTAT 537
            CG + T+AL+ +
Sbjct: 235 TCGSAHTLALSTS 247



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 114/225 (50%), Gaps = 25/225 (11%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           G V  WG+G    LG+G              D  D L PK++E+ +   A  IACGS  A
Sbjct: 38  GHVLTWGKGRYGRLGHG--------------DSEDQLRPKLVEALLGYRAIDIACGSGDA 83

Query: 309 --VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
             + +T    ++SWG+G  GKLG G       P  I++L G  +  V CG   + A+T S
Sbjct: 84  QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKS 143

Query: 367 GDLYTWGDG-IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
           G +YTWG G  H LG  G V  +    P+KV+  ++G +I SI  G  H  A + +G+++
Sbjct: 144 GAVYTWGKGDFHRLG-HGSVDHVRR--PKKVAA-LQGKKIISIATGSLHCVACSDSGEVY 199

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
           T+GD   G LG G  ++   PR V  L+    V  +CG  HT A+
Sbjct: 200 TWGDNDEGQLGDGTVTAIQWPRLVTALQGKHIVKVTCGSAHTLAL 244



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 120/261 (45%), Gaps = 17/261 (6%)

Query: 330 HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEIS 389
           HG       PKL++ LNG ++  +ACG  H+ A+T SG + TWG G +  G LG      
Sbjct: 1   HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSED 58

Query: 390 HWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPR 447
              P+ V   + G +   I CG     T  IT    ++++GDG +G LG G      +P 
Sbjct: 59  QLRPKLVEALL-GYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPY 117

Query: 448 EVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR 507
           ++E+L  L  V   CG   + A+ +            S  ++TWG G   +LGHG  +  
Sbjct: 118 KIESLAGLGVVKVECGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHV 165

Query: 508 VVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN 567
             P  V          +A G    +A + +G+V++ G  D GQLG    T     R+   
Sbjct: 166 RRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQWPRLVTA 225

Query: 568 IKHRYIEDIACGSYHIAVVSS 588
           ++ ++I  + CGS H   +S+
Sbjct: 226 LQGKHIVKVTCGSAHTLALST 246



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 95/184 (51%), Gaps = 16/184 (8%)

Query: 238 SSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLD 297
           S  +Q  C  D D   +V+ WG+G    L  G  +G +          LP  +ES   L 
Sbjct: 80  SGDAQTLCITDDD---NVWSWGDGDYGKLGRGGSDGCK----------LPYKIESLAGLG 126

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
              + CGS+ +V +TK G +++WG+G   +LGHG    V  PK + AL G  I  +A G 
Sbjct: 127 VVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGS 186

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
            H  A + SG++YTWGD  ++ G LG  +  +   PR V+  ++G  I  + CG  HT A
Sbjct: 187 LHCVACSDSGEVYTWGD--NDEGQLGDGTVTAIQWPRLVTA-LQGKHIVKVTCGSAHTLA 243

Query: 418 ITSA 421
           ++++
Sbjct: 244 LSTS 247



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 43/68 (63%)

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
           + DIACGS H A +++   V TWGKG  G+LGHGD+E++  P LVEAL   +   + CGS
Sbjct: 21  VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGS 80

Query: 633 NFTAAICL 640
                +C+
Sbjct: 81  GDAQTLCI 88


>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
           norvegicus]
          Length = 1149

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 198/405 (48%), Gaps = 36/405 (8%)

Query: 249 FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           F+ L D+    E   +G LG  + G+  + A  R    P+ LE+   L     A G +H+
Sbjct: 139 FENLSDI---PEPQSHGWLG--IAGMYFTWAPGRRQ--PRRLEAGTGLKLLKAASGERHS 191

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           +L+    +++S G+ S G+LG         P+ I AL+  +I +V+CG+ H+ AV   G 
Sbjct: 192 LLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGR 251

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           ++TWG G      +G+  EIS ++P K++  + G++I  + CG +H+ A++  G++F++G
Sbjct: 252 VFTWGAGSEGQLGIGESKEIS-FMPTKINS-LAGIKIIQVSCGHYHSLALSEDGQVFSWG 309

Query: 429 DGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
               G LG G+   S + P++V++L+ +     + G  H+ A+  + G +          
Sbjct: 310 SNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGTHSFAL-SLMGTS---------- 358

Query: 488 LFTWGDGAEGQL---GHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
            F WG+   GQL   G+   E    P  +     ++   ++CG+  T  LT  GQVF+ G
Sbjct: 359 -FGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLTEDGQVFTFG 417

Query: 545 SADYGQL-GSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN-- 600
            +   QL  SP S    P  IEG   H  +  I CGSYH IA V +  +V + G+G +  
Sbjct: 418 GSSSEQLQHSPRSGRGGPQLIEGIGGH--VSQIECGSYHTIAYVYTTGQVVSLGRGPSCT 475

Query: 601 GQLGHGDNENKQTPTLVEA--LRDKQVKSVVCG--SNFTAAICLH 641
               H +        L+ A  L D +VK +  G  +NF    C H
Sbjct: 476 SNATHQEAACSDVTCLLSAKDLVDIEVKDIFAGAHANFVTT-CRH 519


>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 598

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 191/407 (46%), Gaps = 39/407 (9%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           +  S   +++  P+ +++    D    A GS ++  VT+ G++++ G     +LG     
Sbjct: 49  QTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGSNDARQLGVKGRE 108

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
               P  + AL  +N+H VACG+ H  AV  +G L  WG   +  G LG     +     
Sbjct: 109 VALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGS--NEYGQLGTGEVGASAAQP 166

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           +V  ++ G   + +  G  H+ A+TS+G++++FG+G+FGALGHGD ++ + P  V+ L  
Sbjct: 167 RVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFGALGHGDVNNRAKPTLVQALWP 226

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
              V  + G + +AA+              S ++FTWG    GQLG+G+     +P  V 
Sbjct: 227 EAIVSIAAGEYFSAAVSL------------SGRVFTWGRNKYGQLGNGEFGNAFLPQPVP 274

Query: 515 VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK--------FPTRIEG 566
             +     +VACG    IALT  G+V++ G    GQLG   + G          P+R++ 
Sbjct: 275 GIEQA--VQVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNLGSEALNGCLCSPSRVD- 331

Query: 567 NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN--GQLGHGDNENKQTPTLVEALRDKQ 624
           ++  + I  ++ G+ H   VS   ++  WG GAN  GQL      +   PT V  L    
Sbjct: 332 SLADQSIRQVSAGARHSFFVSPGEQL--WGAGANDEGQLALQSVPSVALPTRVPGLPGLP 389

Query: 625 VKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYNC 671
           ++  V   + +        +++ D S  SG +N    RR    C +C
Sbjct: 390 MRFAVAAGDHS--------IAVLDES--SGLQNGGLQRRTSGPCRSC 426



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 164/327 (50%), Gaps = 31/327 (9%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DG 375
           +++WG    G+ G G + + + P+ + AL G ++   A G +++  VT  G+LYT G + 
Sbjct: 39  LYTWGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGSND 98

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
              LG+ G+   +    P +VS  +E   +  + CG  H  A+   G L  +G   +G L
Sbjct: 99  ARQLGVKGREVALE---PIRVSA-LEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQL 154

Query: 436 GHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG 494
           G G+  +S + PR ++ ++       + G  H+ A+             SS +++++G+G
Sbjct: 155 GTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALT------------SSGQVYSFGEG 202

Query: 495 AEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSP 554
           + G LGHGD   R  P  V+     +   +A G   + A++ +G+VF+ G   YGQLG+ 
Sbjct: 203 SFGALGHGDVNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGN- 261

Query: 555 GSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
           G  G    P  + G I+      +ACG +H   ++   EVYTWG  ++GQLG G N   +
Sbjct: 262 GEFGNAFLPQPVPG-IEQAV--QVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNLGSE 318

Query: 613 -------TPTLVEALRDKQVKSVVCGS 632
                  +P+ V++L D+ ++ V  G+
Sbjct: 319 ALNGCLCSPSRVDSLADQSIRQVSAGA 345



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 111/219 (50%), Gaps = 15/219 (6%)

Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
           L+T+G    G  G G   +++ P  V+ L+    V A+ G +++A +             
Sbjct: 39  LYTWGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTR----------- 87

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
              +L+T G     QLG    E  + P+ V   +  +   VACG    +A+   G + + 
Sbjct: 88  -DGELYTTGSNDARQLGVKGREVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAW 146

Query: 544 GSADYGQLGSP--GSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           GS +YGQLG+   G++   P R+   I+  +   +A G+ H   ++S  +VY++G+G+ G
Sbjct: 147 GSNEYGQLGTGEVGASAAQP-RVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSFG 205

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            LGHGD  N+  PTLV+AL  + + S+  G  F+AA+ L
Sbjct: 206 ALGHGDVNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSL 244


>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
          Length = 1287

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 187/411 (45%), Gaps = 59/411 (14%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +  WG    +G+LG    G+E         L P  +ES   +  + +A G  H++ +T
Sbjct: 567 GLILSWGAN-SDGVLG-HTGGIE--------QLWPLAIESLSSVQVKMVAAGEFHSLCLT 616

Query: 313 KQGQIFSWGEGSGGKLGHGVE--------ADVSYPKLI---DALNGSNIHMVACGEFHTC 361
           + G++ S+G    G+ G  +         A V+ P+ I   D L    +  +A G +H+ 
Sbjct: 617 ENGEVTSFGLNDQGQCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGGYHSA 676

Query: 362 AVTLSGDLYTWG---------DGIHNLGLLGQV-------SEISHWIPRKVS-GQMEGLQ 404
            VT  G+LYT+G         D +  LG  G         ++ S++ P+      + G  
Sbjct: 677 LVTADGELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRLSALNGQV 736

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCG 463
           +  + CG +H+A +T  G L+T+G G  G LGHGD +  + P+ VE  +K+   V  +CG
Sbjct: 737 VKQVACGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKIMVKVACG 796

Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKL-----FTWGDGAEGQLGHGDAEPRVVP--LCVKVS 516
             H+AA V+ AG    + G  S +L     +      EG  G G +    +P  L +   
Sbjct: 797 ENHSAA-VDSAGVIYTTGGDESGQLGKGDEWICATHGEGCTGSGWSCQERIPTFLSILSV 855

Query: 517 DDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTR---IEGNIKHRYI 573
             + F  +ACGH    A+T  G +++ G      LG  G   + PT    I+G +     
Sbjct: 856 RHVQFVDIACGHGFCAAITNRGLLYTWGKGTALGLGPSGDVSE-PTHLSSIDGVV----- 909

Query: 574 EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN--KQTPTLVEALRD 622
             +ACG  H A ++ K ++Y WG    G+LG G +     +TP LV A  D
Sbjct: 910 -SVACGDIHAAALTDKGQLYMWGSSEAGRLGDGRSTEGVTRTPKLVPAFAD 959



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 141/325 (43%), Gaps = 76/325 (23%)

Query: 340 KLIDALNGSNIHMVA-----------CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI 388
           K I   N +++H+++             E++      +G + +WG   ++ G+LG    I
Sbjct: 529 KFISKQNMTSLHLLSEASLKNKSEEFIAEYYKNIKEQTGLILSWG--ANSDGVLGHTGGI 586

Query: 389 SHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH--------GDR 440
               P  +   +  +Q+  +  G +H+  +T  G++ +FG    G  G          D 
Sbjct: 587 EQLWPLAIES-LSSVQVKMVAAGEFHSLCLTENGEVTSFGLNDQGQCGQPITKIAESSDL 645

Query: 441 SSTSVPREV---ETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEG 497
           ++ + PR +   + L++   V  + G +H+A +             +  +L+T+G G E 
Sbjct: 646 AAVARPRPIVLPDDLRKKTVVSIAAGGYHSALVT------------ADGELYTFGRGGEF 693

Query: 498 QLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGST 557
           QLGH                              +AL   G      S       +   T
Sbjct: 694 QLGH---------------------------DTVMALGEGGNALHYRS-------NSAQT 719

Query: 558 GKF---PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
             F   PTR+   +  + ++ +ACG +H A V+ +  +YTWG+GANGQLGHGD  ++ TP
Sbjct: 720 SYFQPKPTRLSA-LNGQVVKQVACGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQATP 778

Query: 615 TLVEA-LRDKQVKSVVCGSNFTAAI 638
             VEA ++DK +  V CG N +AA+
Sbjct: 779 KRVEAGIKDKIMVKVACGENHSAAV 803


>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 1044

 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 165/331 (49%), Gaps = 23/331 (6%)

Query: 317 IFSWGEGSGGKLGHG-VEADVSYPKLIDALN-GSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           ++ WG    G+LG G +E D  +  +       SN+  V  GE HT  +T SG++++ G+
Sbjct: 1   MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGN 60

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++L  LG   + +   P KV G ++  +I+ I CG  HT A    G+LF +G  + G 
Sbjct: 61  --NDLDQLGHKKQRTK--PEKVEG-LDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQ 115

Query: 435 LGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG 494
           LG  + ++  +P+ +++L     V  SCG  H+ A+         +NG    +L++WG  
Sbjct: 116 LGF-NGTTQPLPKIIKSLATFHIVQISCGKNHSLALT--------NNG----ELYSWGGN 162

Query: 495 AEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS 553
            +GQLG G  +E    P  +K    I    +ACG + + AL+ +G ++  G   YGQLG 
Sbjct: 163 YDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGL 222

Query: 554 PGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                K  PT+++  ++   ++ IACG    A +S+   V+T G G  GQLGHG   N+ 
Sbjct: 223 NDEENKLHPTQLK-TLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEI 281

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
            P  +  L    V  V CG   T A+   +G
Sbjct: 282 LPRKIMELMGSTVTQVSCGKRHTLALVPSRG 312



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 142/302 (47%), Gaps = 22/302 (7%)

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG 356
           +   +  G  H V++TK G++FS G     +LGH  +   + P+ ++ L+   I  ++CG
Sbjct: 35  NVSQVTMGENHTVMLTKSGEVFSCGNNDLDQLGH--KKQRTKPEKVEGLDFYRITKISCG 92

Query: 357 EFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
             HT A    G L+ WG   H  LG  G    +      K+   +    I  I CG  H+
Sbjct: 93  GNHTLAFNEWGQLFGWGSDSHGQLGFNGTTQPLP-----KIIKSLATFHIVQISCGKNHS 147

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTS-VPREVETLKELKTVMASCGVWHTAAIVEVA 474
            A+T+ G+L+++G    G LG G RS     P  +++L  +     +CG  H+ A+ +  
Sbjct: 148 LALTNNGELYSWGGNYDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSK-- 205

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                     S  ++ WG    GQLG  D E ++ P  +K    I    +ACG   +  L
Sbjct: 206 ----------SGAIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFL 255

Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVY 593
           +A G VF+ G+  YGQLG   ++ +   R    +    +  ++CG  H +A+V S+  VY
Sbjct: 256 SADGGVFTCGAGMYGQLGHGSTSNEILPRKIMELMGSTVTQVSCGKRHTLALVPSRGRVY 315

Query: 594 TW 595
           ++
Sbjct: 316 SF 317



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 134/279 (48%), Gaps = 21/279 (7%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +Y WG  +H    LG +     + P + + +     +S +  G  HT  +T +G++F+ G
Sbjct: 1   MYCWGSTVHGELGLGGIEHDQIFAPIEHTFKYAS-NVSQVTMGENHTVMLTKSGEVFSCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           +     LGH  +   + P +VE L   +    SCG  HT A  E              +L
Sbjct: 60  NNDLDQLGH--KKQRTKPEKVEGLDFYRITKISCGGNHTLAFNEWG------------QL 105

Query: 489 FTWGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           F WG  + GQLG +G  +P  +P  +K        +++CG + ++ALT  G+++S G   
Sbjct: 106 FGWGSDSHGQLGFNGTTQP--LPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGGNY 163

Query: 548 YGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
            GQLG        K PT I+  +    I  IACGS H   +S    +Y WGK   GQLG 
Sbjct: 164 DGQLGLGMRSEYEKQPTLIKSLLGIP-IAFIACGSNHSFALSKSGAIYGWGKNTYGQLGL 222

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            D ENK  PT ++ LR  +VK + CG +F+A +    GV
Sbjct: 223 NDEENKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGV 261



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 129/261 (49%), Gaps = 22/261 (8%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+ +E         I+CG  H +   + GQ+F WG  S G+LG         PK+I +L 
Sbjct: 75  PEKVEGLDFYRITKISCGGNHTLAFNEWGQLFGWGSDSHGQLGFNGTTQ-PLPKIIKSLA 133

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWG---DGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
             +I  ++CG+ H+ A+T +G+LY+WG   DG   LG+  +  +    I       + G+
Sbjct: 134 TFHIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEYEKQPTLIK-----SLLGI 188

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
            I+ I CG  H+ A++ +G ++ +G  T+G LG  D  +   P +++TL+ ++    +CG
Sbjct: 189 PIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVKYIACG 248

Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
              +A +    G            +FT G G  GQLGHG     ++P  +      +  +
Sbjct: 249 EDFSAFLSADGG------------VFTCGAGMYGQLGHGSTSNEILPRKIMELMGSTVTQ 296

Query: 524 VACGHSITIALTAT-GQVFSM 543
           V+CG   T+AL  + G+V+S 
Sbjct: 297 VSCGKRHTLALVPSRGRVYSF 317



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 117/230 (50%), Gaps = 15/230 (6%)

Query: 249 FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           F+  G +F WG    +G LG   NG            LPK+++S        I+CG  H+
Sbjct: 99  FNEWGQLFGWGSD-SHGQLG--FNGTTQP--------LPKIIKSLATFHIVQISCGKNHS 147

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVS-YPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
           + +T  G+++SWG    G+LG G+ ++    P LI +L G  I  +ACG  H+ A++ SG
Sbjct: 148 LALTNNGELYSWGGNYDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSG 207

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            +Y WG   +  G LG   E +   P ++   +  +++  I CG   +A +++ G +FT 
Sbjct: 208 AIYGWGKNTY--GQLGLNDEENKLHPTQLK-TLRSIRVKYIACGEDFSAFLSADGGVFTC 264

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           G G +G LGHG  S+  +PR++  L        SCG  HT A+V   G+ 
Sbjct: 265 GAGMYGQLGHGSTSNEILPRKIMELMGSTVTQVSCGKRHTLALVPSRGRV 314



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 96/176 (54%), Gaps = 13/176 (7%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+++ WG G  +G LG  +     S  +++    P +++S + +    IACGS H+  ++
Sbjct: 154 GELYSWG-GNYDGQLGLGMR----SEYEKQ----PTLIKSLLGIPIAFIACGSNHSFALS 204

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K G I+ WG+ + G+LG   E +  +P  +  L    +  +ACGE  +  ++  G ++T 
Sbjct: 205 KSGAIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTC 264

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT-SAGKLFTF 427
           G G++  G LG  S  +  +PRK+  ++ G  ++ + CG  HT A+  S G++++F
Sbjct: 265 GAGMY--GQLGHGSTSNEILPRKIM-ELMGSTVTQVSCGKRHTLALVPSRGRVYSF 317


>gi|113205520|ref|NP_001037872.1| retinitis pigmentosa GTPase regulator [Xenopus (Silurana)
           tropicalis]
 gi|77808103|gb|ABB03733.1| RPGR 1-19 isoform [Xenopus (Silurana) tropicalis]
          Length = 729

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 167/344 (48%), Gaps = 39/344 (11%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+CG +H VLVT  G+++ +G  + G+LG    + +S P  + AL    + + ACG  HT
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGVEAGSAISKPTCVKALKSEKVVLAACGRHHT 101

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
              T  G LY+ G   ++ G LG          +++S      +I  +  G   +AA+T 
Sbjct: 102 LVYTEQGKLYSSGG--NSEGQLGLGDTAGRTSFQEISFFTAQYKIKQLSAGSNMSAALTV 159

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            GKLF +GD + G LG    +    P++V+T K +  +  SCG +H+A + +        
Sbjct: 160 DGKLFMWGDNSEGQLGLEKGTIYCTPQKVDTGKPIAWI--SCGYYHSAFVTQDG------ 211

Query: 481 NGLSSKKLFTWGDGAEGQLG--------HGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
                 +L+T+G+   G+LG        H   + RV+ L  KV+       V+CG   TI
Sbjct: 212 ------ELYTFGEPENGKLGLPPDKIKKHKKPQ-RVLGLSGKVT------MVSCGGEHTI 258

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIK---HRYIEDIACGSYHIAVVSSK 589
           A+T   +V++ G   +GQLG    T  F T I   +     + I  + CG  H A+++ K
Sbjct: 259 AVTEK-EVYTFGLGQFGQLGH--GTFIFETHIPKAVDALTKKKIRYVTCGENHTAIITEK 315

Query: 590 SEVYTWGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCG 631
             +YT+G G +G+LG G+    N+  P L        V+SV CG
Sbjct: 316 GLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACG 359



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 100/318 (31%), Positives = 142/318 (44%), Gaps = 63/318 (19%)

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
           SG L+T+G            S+ +  IP K    ++  + + I CG  HT  +T  GKL+
Sbjct: 13  SGALFTFGK-----------SKFAENIPSKF--WLKNDKPARISCGDEHTVLVTGNGKLY 59

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE------------- 472
            FG   +G LG    S+ S P  V+ LK  K V+A+CG  HT    E             
Sbjct: 60  VFGSNNWGQLGVEAGSAISKPTCVKALKSEKVVLAACGRHHTLVYTEQGKLYSSGGNSEG 119

Query: 473 ------VAGKTS------------------GSNGLSS----KKLFTWGDGAEGQLGHGDA 504
                  AG+TS                  GSN  ++     KLF WGD +EGQLG    
Sbjct: 120 QLGLGDTAGRTSFQEISFFTAQYKIKQLSAGSNMSAALTVDGKLFMWGDNSEGQLGLEKG 179

Query: 505 EPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGST---GKFP 561
                P  V     I++  ++CG+  +  +T  G++++ G  + G+LG P       K P
Sbjct: 180 TIYCTPQKVDTGKPIAW--ISCGYYHSAFVTQDGELYTFGEPENGKLGLPPDKIKKHKKP 237

Query: 562 TRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN-ENKQTPTLVEAL 620
            R+ G      +  ++CG  H   V+ K EVYT+G G  GQLGHG        P  V+AL
Sbjct: 238 QRVLG--LSGKVTMVSCGGEHTIAVTEK-EVYTFGLGQFGQLGHGTFIFETHIPKAVDAL 294

Query: 621 RDKQVKSVVCGSNFTAAI 638
             K+++ V CG N TA I
Sbjct: 295 TKKKIRYVTCGENHTAII 312



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 128/250 (51%), Gaps = 30/250 (12%)

Query: 293 TVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDALNGSNI 350
           T     + ++ GS  +  +T  G++F WG+ S G+L  G+E    Y  P+ +D   G  I
Sbjct: 139 TAQYKIKQLSAGSNMSAALTVDGKLFMWGDNSEGQL--GLEKGTIYCTPQKVDT--GKPI 194

Query: 351 HMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE--ISHWIPRKVSGQMEGLQISSI 408
             ++CG +H+  VT  G+LYT+G+  +  G LG   +    H  P++V G + G +++ +
Sbjct: 195 AWISCGYYHSAFVTQDGELYTFGEPEN--GKLGLPPDKIKKHKKPQRVLG-LSG-KVTMV 250

Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHT 467
            CG  HT A+T   +++TFG G FG LGHG     T +P+ V+ L + K    +CG  HT
Sbjct: 251 SCGGEHTIAVTEK-EVYTFGLGQFGQLGHGTFIFETHIPKAVDALTKKKIRYVTCGENHT 309

Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE--PRVVPLCVKVSDDISFCKVA 525
           A I E         GL    L+T+GDG  G+LG G+     + VP+        +   VA
Sbjct: 310 AIITE--------KGL----LYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVA 357

Query: 526 CG--HSITIA 533
           CG  H +  A
Sbjct: 358 CGGCHMLVFA 367



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 2/76 (2%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE--ADVSYPKLID 343
           +PK +++      + + CG  H  ++T++G ++++G+G  GKLG G E   +   P L  
Sbjct: 287 IPKAVDALTKKKIRYVTCGENHTAIITEKGLLYTFGDGRHGKLGLGEENFTNQFVPILCS 346

Query: 344 ALNGSNIHMVACGEFH 359
                 +  VACG  H
Sbjct: 347 NFLKFTVQSVACGGCH 362


>gi|348575702|ref|XP_003473627.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cavia
           porcellus]
          Length = 1080

 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 166/366 (45%), Gaps = 37/366 (10%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +   D    L P+  +  +    + + CG +H V V   G +++ G    G+LGH  E  
Sbjct: 14  LGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLG-----QVSEIS 389
              P+ + AL+  NI  V+CGE HT A+   G +Y WG D    LGLLG     +V   S
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRKS 131

Query: 390 HWIPRKVSGQMEGLQ--------ISSIC--CGP-WHTA----AITSAGKLFTFGDGTFGA 434
            ++P   + +++  +        +S++C    P  H A       SA ++F +G   +G 
Sbjct: 132 IFMPVDKNIRIKECKKTASRKSWVSTLCSELAPDSHLAESGQVAVSASEVFCWGQNKYGQ 191

Query: 435 LGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG G D    + P+ +++L  +  +  + G  H+  +              S  +F WG 
Sbjct: 192 LGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLT------------LSGAIFGWGR 239

Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS 553
              GQLG  D   R VP  +K         + CG   T ALT  G VF+ G+  YGQLG 
Sbjct: 240 NKFGQLGLNDENDRYVPYLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGH 299

Query: 554 PGSTGKFPTRIEGNIKHRYIEDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
             ++ +   R    +    +  IACG  H  A V S   +Y++G G NGQLG G   N++
Sbjct: 300 NSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRK 359

Query: 613 TPTLVE 618
           +P  V+
Sbjct: 360 SPFTVK 365



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 157/338 (46%), Gaps = 22/338 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  D      +  V CG  HT  V   G +YT G 
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---DGT 431
             ++LG LG   E S   P +V   ++   I ++ CG  HT A+   G+++ +G   DG 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115

Query: 432 FGALGHGD-----RSSTSVPREVET-LKELKTVMASCGVWHTAAIVEVAGKT----SGSN 481
            G LG  +     R S  +P +    +KE K   AS   W +    E+A  +    SG  
Sbjct: 116 LGLLGSEECIRVPRKSIFMPVDKNIRIKECKKT-ASRKSWVSTLCSELAPDSHLAESGQV 174

Query: 482 GLSSKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
            +S+ ++F WG    GQLG G D + +  P  +K    I F +VA G + +  LT +G +
Sbjct: 175 AVSASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI 234

Query: 541 FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
           F  G   +GQLG      ++   +  +++ + I  I CG  H A ++ +  V+T+G G  
Sbjct: 235 FGWGRNKFGQLGLNDENDRYVPYLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGY 294

Query: 601 GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           GQLGH    ++  P  V  L    V  + CG   T+A 
Sbjct: 295 GQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAF 332



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    +A G  H+ ++T 
Sbjct: 180 EVFCWGQN-KYGQLGLGIDCKKQTS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 230

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 231 SGAIFGWGRNKFGQLGLNDENDRYVPYLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 290

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 291 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 347

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 348 GQLGTGSTSNRKSPFTVK 365



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 130/303 (42%), Gaps = 44/303 (14%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+       LG + E     PRK S      ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P +V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGHGDAE-----PR---VVPL--------CVKVSDDISFCKVAC------ 526
           + WG  ++GQLG   +E     PR    +P+        C K +   S+    C      
Sbjct: 106 YAWGLDSDGQLGLLGSEECIRVPRKSIFMPVDKNIRIKECKKTASRKSWVSTLCSELAPD 165

Query: 527 ---GHSITIALTATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSY 581
                S  +A++A+ +VF  G   YGQLG      K   P  I+  +   +++ +A G  
Sbjct: 166 SHLAESGQVAVSAS-EVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQ-VAAGGA 223

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
           H  V++    ++ WG+   GQLG  D  ++  P L+++LR +++  + CG + TAA+   
Sbjct: 224 HSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPYLLKSLRSQKIVYICCGEDHTAALTKE 283

Query: 642 KGV 644
            GV
Sbjct: 284 GGV 286


>gi|324502986|gb|ADY41305.1| E3 ubiquitin-protein ligase HERC4 [Ascaris suum]
          Length = 1038

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/341 (31%), Positives = 159/341 (46%), Gaps = 34/341 (9%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS---YPKLIDALNGSNIHM 352
           +  ++IA G +H + +   G+++S G    G+LG G   + S   YP L+    G NI  
Sbjct: 68  VSVRAIATGERHTLFLADDGKVWSCGSNENGELGRGGCQEGSFTIYPVLLSG--GVNIVQ 125

Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHW-IPRKVSGQMEGLQISSICCG 411
           +A G  H  AV   G L+ WG   H  G L   S I+   IP++V    E +Q++   CG
Sbjct: 126 IAAGRAHNMAVADDGRLFAWGSNSH--GQLALPSNITSTDIPKRVVSLTETVQVA---CG 180

Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIV 471
             HT AI  +G++F +G          D      P+E+E    L  V  + G  +  A+ 
Sbjct: 181 TDHTIAIVESGRIFVWG-------LQPDGRVLYAPKEIEFFMALPVVQVNAGSDYYVALT 233

Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
                        S  +F WG    GQLG  D + R  P  V     ++   VACGHS T
Sbjct: 234 ------------VSGAMFVWGSNEYGQLGTSDNKERTTPAEVTTLHSLNVVHVACGHSHT 281

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIE-GNIKHRYIEDIACGSYHIAVVSSKS 590
           +ALT  G++F  GS   GQLGS        T +    +   ++  +ACG  H   ++   
Sbjct: 282 VALTHEGRLFVCGSDSCGQLGSGRKVPSQNTMLAVTEMLGTHVTRVACGRCHTLALAG-G 340

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
           ++Y +G  ++GQLG G+  ++ TP  ++AL D  V SV  G
Sbjct: 341 KMYAFGLNSSGQLGSGNVRSQVTPRPIDALTD--VVSVFAG 379



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 109/253 (43%), Gaps = 40/253 (15%)

Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG---DRSSTSVPREVETLKELKT 457
           +G+ + +I  G  HT  +   GK+++ G    G LG G   + S T  P           
Sbjct: 66  DGVSVRAIATGERHTLFLADDGKVWSCGSNENGELGRGGCQEGSFTIYP----------- 114

Query: 458 VMASCGVWHTAAIVEVA-GKTSGSNGLSSKKLFTWGDGAEGQLG------HGDAEPRVVP 510
           V+ S GV     IV++A G+          +LF WG  + GQL         D   RVV 
Sbjct: 115 VLLSGGV----NIVQIAAGRAHNMAVADDGRLFAWGSNSHGQLALPSNITSTDIPKRVVS 170

Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH 570
           L   V       +VACG   TIA+  +G++F  G      L   G     P  IE  +  
Sbjct: 171 LTETV-------QVACGTDHTIAIVESGRIFVWG------LQPDGRVLYAPKEIEFFMAL 217

Query: 571 RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
             ++  A   Y++A+  S + ++ WG    GQLG  DN+ + TP  V  L    V  V C
Sbjct: 218 PVVQVNAGSDYYVALTVSGA-MFVWGSNEYGQLGTSDNKERTTPAEVTTLHSLNVVHVAC 276

Query: 631 GSNFTAAICLHKG 643
           G + T A+  H+G
Sbjct: 277 GHSHTVALT-HEG 288



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 20/176 (11%)

Query: 479 GSNGLSSKKLFTWGDGAEGQLG-----HGD-----AEPRVVPLCVKVSDDISFCKVACGH 528
           G   +  ++L+ +G G +GQLG     +GD       P+VV       D +S   +A G 
Sbjct: 18  GRRRMVRRQLYAFGYGGDGQLGNRGFLNGDDGNIVKTPQVVVGAPTSHDGVSVRAIATGE 77

Query: 529 SITIALTATGQVFSMGSADYGQLG----SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIA 584
             T+ L   G+V+S GS + G+LG      GS   +P  + G +    I  IA G  H  
Sbjct: 78  RHTLFLADDGKVWSCGSNENGELGRGGCQEGSFTIYPVLLSGGVN---IVQIAAGRAHNM 134

Query: 585 VVSSKSEVYTWGKGANGQLGHGDN-ENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            V+    ++ WG  ++GQL    N  +   P  V +L   +   V CG++ T AI 
Sbjct: 135 AVADDGRLFAWGSNSHGQLALPSNITSTDIPKRVVSL--TETVQVACGTDHTIAIV 188


>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
          Length = 1034

 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 182/367 (49%), Gaps = 29/367 (7%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+ LE+   L     A G +H++L+    +++S G+ S G+LG         P+ I AL+
Sbjct: 19  PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALS 78

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
             +I +V+CG+ H+ AV   G ++TWG G      +G+  EIS ++P K++  + G++I 
Sbjct: 79  TVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEIS-FMPTKINS-LAGIKII 136

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVW 465
            + CG +H+ A++  G++F++G    G LG G+   S + P++V++L+ +     + G  
Sbjct: 137 QVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGT 196

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQL---GHGDAEPRVVPLCVKVSDDISFC 522
           H+ A+  + G +           F WG+   GQL   G+   E    P  +     ++  
Sbjct: 197 HSFAL-SLMGTS-----------FGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVV 244

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQL-GSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
            ++CG+  T  LT  GQVF+ G +   QL  SP S    P  IEG   H  +  I CGSY
Sbjct: 245 YISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGH--VSQIECGSY 302

Query: 582 H-IAVVSSKSEVYTWGKGAN--GQLGHGDNENKQTPTLVEA--LRDKQVKSVVCG--SNF 634
           H IA V +  +V + G+G +      H +        L+ A  L D +VK +  G  +NF
Sbjct: 303 HTIAYVYTTGQVVSLGRGPSCTSNATHQEAACSDVTCLLSAKDLVDIEVKDIFAGAHANF 362

Query: 635 TAAICLH 641
               C H
Sbjct: 363 VTT-CRH 368



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 115/252 (45%), Gaps = 18/252 (7%)

Query: 228 SFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLP 287
           +  I L S     S   CH+     G VF WG G   G LG            +  + +P
Sbjct: 79  TVHIDLVSCGKEHSVAVCHQ-----GRVFTWGAG-SEGQLG--------IGESKEISFMP 124

Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALN 346
             + S   +    ++CG  H++ +++ GQ+FSWG    G+LG G      + P+ + +L 
Sbjct: 125 TKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLE 184

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQI 405
           G  +  VA G  H+ A++L G  + WG+     L L G  ++   + P  + G ++ L +
Sbjct: 185 GIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSI-GALKTLNV 243

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
             I CG  HT+ +T  G++FTFG  +   L H  RS    P+ +E +         CG +
Sbjct: 244 VYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGG-HVSQIECGSY 302

Query: 466 HTAAIVEVAGKT 477
           HT A V   G+ 
Sbjct: 303 HTIAYVYTTGQV 314



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 17/153 (11%)

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           FTW  G            R  P  ++    +   K A G   ++ L +  +V+S G    
Sbjct: 10  FTWAPG------------RRQPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSR 57

Query: 549 GQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
           GQLG  SP ST K P  I+  +   +I+ ++CG  H   V  +  V+TWG G+ GQLG G
Sbjct: 58  GQLGQKSPQST-KRPEPIQA-LSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIG 115

Query: 607 DN-ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           ++ E    PT + +L   ++  V CG   + A+
Sbjct: 116 ESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 148


>gi|302854088|ref|XP_002958555.1| hypothetical protein VOLCADRAFT_69571 [Volvox carteri f.
           nagariensis]
 gi|300256130|gb|EFJ40404.1| hypothetical protein VOLCADRAFT_69571 [Volvox carteri f.
           nagariensis]
          Length = 201

 Score =  137 bits (346), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 66/180 (36%), Positives = 100/180 (55%), Gaps = 3/180 (1%)

Query: 294 VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMV 353
           + +D   +AC  +HA L+T+ G++++WG G  G LGHG   DV  P+L+  + G  +  V
Sbjct: 7   ISVDVSRVACAPRHAALITRNGELYTWGVGKDGNLGHGWCGDVPKPRLLTRMGGRGVRAV 66

Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
           ACGE  + A++    L+ WG GI      G     +   P    G  + +++ ++ CGP+
Sbjct: 67  ACGEGASAAISAEQRLFMWGKGIAGQLGNGYAFPCAEPAPVIFPGLRDDVKVLAVSCGPY 126

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE---TLKELKTVMASCGVWHTAAI 470
           HTAAIT  G L+T+G+G FG LGHG +     PR       L++   +  SCG WHTAA+
Sbjct: 127 HTAAITEGGLLYTWGNGLFGRLGHGTQRDEYRPRRCAGSFPLEDKYVINVSCGYWHTAAV 186



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 61/196 (31%), Positives = 98/196 (50%), Gaps = 18/196 (9%)

Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
           G+   + +S + C P H A IT  G+L+T+G G  G LGHG       PR +  +     
Sbjct: 4   GEAISVDVSRVACAPRHAALITRNGELYTWGVGKDGNLGHGWCGDVPKPRLLTRMGGRGV 63

Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV---K 514
              +CG   +AAI             + ++LF WG G  GQLG+G A P   P  V    
Sbjct: 64  RAVACGEGASAAIS------------AEQRLFMWGKGIAGQLGNGYAFPCAEPAPVIFPG 111

Query: 515 VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGN--IKHR 571
           + DD+    V+CG   T A+T  G +++ G+  +G+LG      ++ P R  G+  ++ +
Sbjct: 112 LRDDVKVLAVSCGPYHTAAITEGGLLYTWGNGLFGRLGHGTQRDEYRPRRCAGSFPLEDK 171

Query: 572 YIEDIACGSYHIAVVS 587
           Y+ +++CG +H A V+
Sbjct: 172 YVINVSCGYWHTAAVA 187



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 31/178 (17%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           G+++ WG G    LG+G  G              D   P++L        +++ACG   +
Sbjct: 28  GELYTWGVGKDGNLGHGWCG--------------DVPKPRLLTRMGGRGVRAVACGEGAS 73

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVE------ADVSYPKLIDALNGSNIHMVACGEFHTCA 362
             ++ + ++F WG+G  G+LG+G        A V +P L D +    +  V+CG +HT A
Sbjct: 74  AAISAEQRLFMWGKGIAGQLGNGYAFPCAEPAPVIFPGLRDDV---KVLAVSCGPYHTAA 130

Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ--MEGLQISSICCGPWHTAAI 418
           +T  G LYTWG+G+   G LG  ++   + PR+ +G   +E   + ++ CG WHTAA+
Sbjct: 131 ITEGGLLYTWGNGL--FGRLGHGTQRDEYRPRRCAGSFPLEDKYVINVSCGYWHTAAV 186



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 52/161 (32%), Positives = 75/161 (46%), Gaps = 12/161 (7%)

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           +L+TWG G +G LGHG       P  +          VACG   + A++A  ++F  G  
Sbjct: 29  ELYTWGVGKDGNLGHGWCGDVPKPRLLTRMGGRGVRAVACGEGASAAISAEQRLFMWGKG 88

Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIED------IACGSYHIAVVSSKSEVYTWGKGAN 600
             GQLG+  +   FP      +    + D      ++CG YH A ++    +YTWG G  
Sbjct: 89  IAGQLGNGYA---FPCAEPAPVIFPGLRDDVKVLAVSCGPYHTAAITEGGLLYTWGNGLF 145

Query: 601 GQLGHGDNENKQTPTLVEA---LRDKQVKSVVCGSNFTAAI 638
           G+LGHG   ++  P        L DK V +V CG   TAA+
Sbjct: 146 GRLGHGTQRDEYRPRRCAGSFPLEDKYVINVSCGYWHTAAV 186



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/89 (30%), Positives = 45/89 (50%)

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
           +  +AC   H A+++   E+YTWG G +G LGHG   +   P L+  +  + V++V CG 
Sbjct: 11  VSRVACAPRHAALITRNGELYTWGVGKDGNLGHGWCGDVPKPRLLTRMGGRGVRAVACGE 70

Query: 633 NFTAAICLHKGVSIADHSICSGCRNQFNF 661
             +AAI   + + +    I     N + F
Sbjct: 71  GASAAISAEQRLFMWGKGIAGQLGNGYAF 99


>gi|357156536|ref|XP_003577490.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Brachypodium distachyon]
          Length = 422

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 177/372 (47%), Gaps = 54/372 (14%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN----GSNIHMVAC 355
           S+ACG  H + +T+ G++F+ G    G+LG G     S   ++D +     G  +  ++ 
Sbjct: 74  SLACGGAHTLFLTQSGRVFATGLNDFGQLGIGS----STTHIVDPIEVTGFGEKVVQISA 129

Query: 356 GEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
           G  H+CAVT  G+L+ WG +    LGL   V ++    PRKV   +  +++  +  G  H
Sbjct: 130 GNHHSCAVTADGELFVWGKNSSGQLGLGKGVGKVVS-TPRKVD-YLADVRVRMVALGSEH 187

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSST---------SVPREVETLKELKTVMASCGVW 465
           + A+T  G+  ++G    G LGHG +SS            PR ++ L  +K    + G+ 
Sbjct: 188 SIAVTEGGEALSWGAAGAGRLGHGHKSSILGFGMVSSEYTPRLIKNLDGVKIKRIAAGML 247

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK-V 524
           H+A I E               LF +G   E   G  +  PR       V ++I F + V
Sbjct: 248 HSACIDE------------KGTLFIFGQKTEKVFGRSNDAPRPT-----VVEEIQFSEEV 290

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYH 582
           ACG   T ALT  G ++S GS + G LG  G TG  + P  +   +    +  ++CG  H
Sbjct: 291 ACGGYHTCALTDGGDLYSWGSNENGCLGL-GVTGMVRSPEVLRSTLFKLPVSKVSCGWKH 349

Query: 583 IAVVSSKSEVYTWGKG------------ANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
            AV+S + ++YTWG G            + GQLGHG++ +   P +VE  R+ +   V C
Sbjct: 350 TAVISGE-DIYTWGWGGANGTFFEEGQSSGGQLGHGNDVDYFEPMMVELGRNARAVHVSC 408

Query: 631 GSNFTAAICLHK 642
           G N T AI  +K
Sbjct: 409 GFNHTGAIFEYK 420



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 149/335 (44%), Gaps = 36/335 (10%)

Query: 320 WGEGSGGKLGHGVEADVSYPK---LIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           WG G  G+LG G       P       A  G     +ACG  HT  +T SG ++    G+
Sbjct: 39  WGNGDYGRLGLGALESRWNPTACPFFLARAGDPPASLACGGAHTLFLTQSGRVFA--TGL 96

Query: 377 HNLGLLGQVSEISHWI-PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG-- 433
           ++ G LG  S  +H + P +V+G  E  ++  I  G  H+ A+T+ G+LF +G  + G  
Sbjct: 97  NDFGQLGIGSSTTHIVDPIEVTGFGE--KVVQISAGNHHSCAVTADGELFVWGKNSSGQL 154

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
            LG G     S PR+V+ L +++  M + G  H+ A+ E      G   LS      WG 
Sbjct: 155 GLGKGVGKVVSTPRKVDYLADVRVRMVALGSEHSIAVTE------GGEALS------WGA 202

Query: 494 GAEGQLGHGD---------AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
              G+LGHG                P  +K  D +   ++A G   +  +   G +F  G
Sbjct: 203 AGAGRLGHGHKSSILGFGMVSSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFG 262

Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
                  G      + PT +E   + ++ E++ACG YH   ++   ++Y+WG   NG LG
Sbjct: 263 QKTEKVFGRSNDAPR-PTVVE---EIQFSEEVACGGYHTCALTDGGDLYSWGSNENGCLG 318

Query: 605 HGDNENKQTPTLVEA-LRDKQVKSVVCGSNFTAAI 638
            G     ++P ++ + L    V  V CG   TA I
Sbjct: 319 LGVTGMVRSPEVLRSTLFKLPVSKVSCGWKHTAVI 353



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 147/315 (46%), Gaps = 42/315 (13%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGE------GLGNGLLGGAVNGVEISSADRRDALLPKVL 290
           +S+ +  SC    DG  ++F+WG+      GLG G+      G  +S+        P+ +
Sbjct: 127 ISAGNHHSCAVTADG--ELFVWGKNSSGQLGLGKGV------GKVVST--------PRKV 170

Query: 291 ESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV---------SYPKL 341
           +    +  + +A GS+H++ VT+ G+  SWG    G+LGHG ++ +           P+L
Sbjct: 171 DYLADVRVRMVALGSEHSIAVTEGGEALSWGAAGAGRLGHGHKSSILGFGMVSSEYTPRL 230

Query: 342 IDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQME 401
           I  L+G  I  +A G  H+  +   G L+ +G       + G+ ++     PR     +E
Sbjct: 231 IKNLDGVKIKRIAAGMLHSACIDEKGTLFIFGQKTEK--VFGRSND----APRPTV--VE 282

Query: 402 GLQIS-SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE-TLKELKTVM 459
            +Q S  + CG +HT A+T  G L+++G    G LG G       P  +  TL +L    
Sbjct: 283 EIQFSEEVACGGYHTCALTDGGDLYSWGSNENGCLGLGVTGMVRSPEVLRSTLFKLPVSK 342

Query: 460 ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
            SCG  HTA I      T G  G ++   F  G  + GQLGHG+      P+ V++  + 
Sbjct: 343 VSCGWKHTAVISGEDIYTWGWGG-ANGTFFEEGQSSGGQLGHGNDVDYFEPMMVELGRNA 401

Query: 520 SFCKVACGHSITIAL 534
               V+CG + T A+
Sbjct: 402 RAVHVSCGFNHTGAI 416


>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
           CCMP2712]
          Length = 308

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 151/320 (47%), Gaps = 29/320 (9%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLID---ALNGSNIHMVACGEF 358
           ACG  H V +T++G+++SWG  + G LGHG       PK +D     +  +I  +ACGEF
Sbjct: 4   ACGKLHTVALTEEGRVYSWG-CANGALGHGNSKSQLLPKALDRPLIYSMPSITTIACGEF 62

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
           HT AV   G L+TWG   +  G LG     +H +PR+V    + + I +   G  H+  +
Sbjct: 63  HTLAVGQDGTLWTWGR--NQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQ-HSLVL 119

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           T A K++ FG   FG LG   +   S  P  V  L+       +CG  H+ A+       
Sbjct: 120 TEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMAL------- 172

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA- 536
                L S++L++WG    GQLG G      VP  + +       +++CG+   IA  + 
Sbjct: 173 -----LKSEQLYSWGRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVSE 227

Query: 537 --------TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
                     +V++ G  + GQLG      +   ++   +  R I  +A G +  A +  
Sbjct: 228 YAGPGVPPLEKVYTWGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDE 287

Query: 589 KSEVYTWGKGANGQLGHGDN 608
             ++YTWG    GQLGHGD+
Sbjct: 288 AKQLYTWGCSREGQLGHGDD 307



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 147/298 (49%), Gaps = 29/298 (9%)

Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM--EGLQISSICCG 411
           ACG+ HT A+T  G +Y+WG      G LG  +  S  +P+ +   +      I++I CG
Sbjct: 4   ACGKLHTVALTEEGRVYSWGCAN---GALGHGNSKSQLLPKALDRPLIYSMPSITTIACG 60

Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIV 471
            +HT A+   G L+T+G   +G LGHGD  +  +PR VE L++   + A+ G  H+  + 
Sbjct: 61  EFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVLT 120

Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
           E            + K++ +G    GQLG     +    P  V        C + CG+S 
Sbjct: 121 E------------ANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSH 168

Query: 531 TIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSS 588
           ++AL  + Q++S G  D GQLG     +   P  +    K   ++ I+CG  H IA VS 
Sbjct: 169 SMALLKSEQLYSWGRNDCGQLGLGHYRSSPVPEHLT-MFKKSQVQQISCGYDHNIAFVSE 227

Query: 589 KS--------EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            +        +VYTWG+G  GQLGH +  ++  P +V+ L  + +++V  G   +AAI
Sbjct: 228 YAGPGVPPLEKVYTWGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAI 285



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 140/303 (46%), Gaps = 19/303 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI---ACGSKHAV 309
           G V+ WG    NG LG           + +  LLPK L+  ++    SI   ACG  H +
Sbjct: 17  GRVYSWG--CANGALG---------HGNSKSQLLPKALDRPLIYSMPSITTIACGEFHTL 65

Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
            V + G +++WG    G+LGHG       P+ ++AL        A G  H+  +T +  +
Sbjct: 66  AVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHSLVLTEANKV 125

Query: 370 YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
           Y +G  +   G LG  S++ +     +  ++    +  I CG  H+ A+  + +L+++G 
Sbjct: 126 YAFGSNV--FGQLGLESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKSEQLYSWGR 183

Query: 430 GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
              G LG G   S+ VP  +   K+ +    SCG  H  A V    + +G      +K++
Sbjct: 184 NDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNIAFVS---EYAGPGVPPLEKVY 240

Query: 490 TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
           TWG G EGQLGH +   R VP  V+         VA G   + A+    Q+++ G +  G
Sbjct: 241 TWGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFSSAAIDEAKQLYTWGCSREG 300

Query: 550 QLG 552
           QLG
Sbjct: 301 QLG 303


>gi|301114615|ref|XP_002999077.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262111171|gb|EEY69223.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 529

 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 207/441 (46%), Gaps = 23/441 (5%)

Query: 188 VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
           V+++ A +  + R   + K +  +     +    R          L+ A    +Q +  E
Sbjct: 97  VVAYVALSLKWGRLGYLLKGIKLLLENDAELGGVRLEPLQPLFRELAEASVERAQTTIGE 156

Query: 248 DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSAD-RRDALLPKVLESTVVLDAQSIACGSK 306
           +    G +  +G+G    L  G    V     +   + L+P ++ +T  +  + I   S 
Sbjct: 157 EDQPCGYLMSFGKGDHGKLGHGQCVHVSCQEGNCTENKLVPTMIAATRDILFRRIDSLST 216

Query: 307 HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN-GSNIHMVACGEFHTCAVTL 365
           H++ +T +G   +WG G   +LGHG       P++I+ L     +  +ACG  HT A+  
Sbjct: 217 HSIAITAKGDAMAWGNGDKYRLGHGSSTKEYTPRMIEHLRLKGRVRDLACGLGHTLALME 276

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
           SG+L+ WG+G +    LG  ++     P   S  +  ++   I CG  H+  ++  G+ +
Sbjct: 277 SGELFAWGNGSNGRLGLGDTNDR----PESCSTSVP-VRFRHIFCGASHSLGLSWDGRAY 331

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLK---ELKTVMASCGVWHTAAIVEVAGK--TSGS 480
           T+G    G  GHG  +     +E+E+ +   E + V  + G W        +G+  + G 
Sbjct: 332 TWGKNNQGQCGHGHTNDQWTIQEIESFEDGEEAECVTYAAGGWEHTLFSTASGRVYSCGC 391

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI--SFCKVACGHSITIALTATG 538
               S++      G    LGHGD + R+ P  ++  +D      KVACG   ++A++A+G
Sbjct: 392 GYKDSRRA-----GIPPVLGHGDCDRRLKPTLIQSLEDAREEIVKVACGWDHSLAVSASG 446

Query: 539 QVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           +V++ GS   G+LG  G    F  PT +   ++ R+++D   G  H   ++   E+++ G
Sbjct: 447 KVYTWGSGTNGKLGH-GDEESFDTPTLVR-TMEGRHVKDAKAGCEHTVFLTYDHELWSCG 504

Query: 597 KGANGQLGHGDNENKQTPTLV 617
           +G +G+LGHGD++ ++ PT +
Sbjct: 505 QGDSGRLGHGDSQTRKRPTKI 525



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 159/367 (43%), Gaps = 54/367 (14%)

Query: 315 GQIFSWGEGSGGKLGHGVEADVS-----------YPKLIDALNGSNIHMVACGEFHTCAV 363
           G + S+G+G  GKLGHG    VS            P +I A        +     H+ A+
Sbjct: 162 GYLMSFGKGDHGKLGHGQCVHVSCQEGNCTENKLVPTMIAATRDILFRRIDSLSTHSIAI 221

Query: 364 TLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGK 423
           T  GD   WG+G  +   LG  S    + PR +       ++  + CG  HT A+  +G+
Sbjct: 222 TAKGDAMAWGNG--DKYRLGHGSSTKEYTPRMIEHLRLKGRVRDLACGLGHTLALMESGE 279

Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
           LF +G+G+ G LG GD  +   P    T   ++     CG  H             S GL
Sbjct: 280 LFAWGNGSNGRLGLGD--TNDRPESCSTSVPVRFRHIFCGASH-------------SLGL 324

Query: 484 S-SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD------ISFCKVACGHSITIALTA 536
           S   + +TWG   +GQ GHG    +     ++  +D      +++   A G   T+  TA
Sbjct: 325 SWDGRAYTWGKNNQGQCGHGHTNDQWTIQEIESFEDGEEAECVTY--AAGGWEHTLFSTA 382

Query: 537 TGQVFSMGSA--DYGQLGSPGSTGKF-------PTRIEGNIKHRY-IEDIACGSYHIAVV 586
           +G+V+S G    D  + G P   G         PT I+     R  I  +ACG  H   V
Sbjct: 383 SGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTLIQSLEDAREEIVKVACGWDHSLAV 442

Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSI 646
           S+  +VYTWG G NG+LGHGD E+  TPTLV  +  + VK    G       C H     
Sbjct: 443 SASGKVYTWGSGTNGKLGHGDEESFDTPTLVRTMEGRHVKDAKAG-------CEHTVFLT 495

Query: 647 ADHSICS 653
            DH + S
Sbjct: 496 YDHELWS 502


>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
 gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
          Length = 1052

 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 176/372 (47%), Gaps = 36/372 (9%)

Query: 254 DVFIWGEGLGNGLLG-GAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           +++ WG    +G LG G +   +I +  +    +P   +S V      IACG +H + +T
Sbjct: 2   ELYCWGNA-SHGQLGLGGIEDEQILTPSK----MPWQPDSAV----NQIACGHRHTLFLT 52

Query: 313 KQGQIFSWGEGSGGKLGHGVEAD--VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
             G++++ G     +LGH + +   +  P+L+D +    I  +ACG  H+ A+T  G + 
Sbjct: 53  ASGKVYACGSNDYAQLGHELSSKRPLQIPELVDCV----ITQIACGSRHSMALTEWGQVL 108

Query: 371 TWGDGIHNLGLLGQVSEISH-WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
           +WGD  +  G LG  S+     +P+ V   +    +  I CG  H+ A+T  G+L+ +G 
Sbjct: 109 SWGD--NECGQLGHASDQDVVQLPKTVRALVSK-TVVQIACGNNHSLALTCCGELYAWGS 165

Query: 430 GTFGALG---HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
             +G LG     +    + P  + TL  +     +CG  H+  I +            S 
Sbjct: 166 NIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISK------------SS 213

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
            +F WG    GQLG  D   R  P  +K    +    VACG   ++ LT  G VF+ G+ 
Sbjct: 214 AVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAG 273

Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGH 605
            YGQLG      +   R+   +    I  +ACG+ H +A+V ++  +Y +G G++GQLG 
Sbjct: 274 AYGQLGHGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQLGT 333

Query: 606 GDNENKQTPTLV 617
            + ++   P +V
Sbjct: 334 RNTKSLNLPQMV 345



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 137/281 (48%), Gaps = 19/281 (6%)

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           +LY WG+  H    LG + +     P K+  Q +   ++ I CG  HT  +T++GK++  
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDS-AVNQIACGHRHTLFLTASGKVYAC 60

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           G   +  LGH    S+  P ++  L +      +CG  H+ A+ E              +
Sbjct: 61  GSNDYAQLGH--ELSSKRPLQIPELVDCVITQIACGSRHSMALTEWG------------Q 106

Query: 488 LFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           + +WGD   GQLGH  D +   +P  V+     +  ++ACG++ ++ALT  G++++ GS 
Sbjct: 107 VLSWGDNECGQLGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGSN 166

Query: 547 DYGQLG--SPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
            YGQLG  +P   G+     +   +    +  IACG  H  ++S  S V+ WG+   GQL
Sbjct: 167 IYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQL 226

Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           G  D  N+  PT ++ LR   V+ V CG  F+  +    GV
Sbjct: 227 GLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGV 267



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 157/335 (46%), Gaps = 25/335 (7%)

Query: 316 QIFSWGEGSGGKLGHGVEAD--VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           +++ WG  S G+LG G   D  +  P  +     S ++ +ACG  HT  +T SG +Y  G
Sbjct: 2   ELYCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACG 61

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
              ++   LG   E+S   P ++   ++ + I+ I CG  H+ A+T  G++ ++GD   G
Sbjct: 62  S--NDYAQLGH--ELSSKRPLQIPELVDCV-ITQIACGSRHSMALTEWGQVLSWGDNECG 116

Query: 434 ALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            LGH  D+    +P+ V  L     V  +CG  H+ A+                +L+ WG
Sbjct: 117 QLGHASDQDVVQLPKTVRALVSKTVVQIACGNNHSLALT------------CCGELYAWG 164

Query: 493 DGAEGQLGHGDAEPR---VVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
               GQLG            P+ +     I    +ACG + +  ++ +  VF  G  + G
Sbjct: 165 SNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCG 224

Query: 550 QLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           QLG    T + +PT+++  ++   +  +ACG      ++++  V+T G GA GQLGHG  
Sbjct: 225 QLGLNDETNRAYPTQLK-TLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFC 283

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
            N+  P +V  L    +  V CG+  T A+   +G
Sbjct: 284 GNEMLPRMVMELMGSTISQVACGNRHTLAMVPARG 318



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 101/198 (51%), Gaps = 11/198 (5%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+++ WG  +   L  G     E+   +      P +L + + +  ++IACG  H+ L++
Sbjct: 158 GELYAWGSNIYGQL--GVKTPSELGQCNA-----PMLLTTLLGIPVRAIACGGNHSFLIS 210

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K   +F WG  + G+LG   E + +YP  +  L    +  VACG+  +  +T  G ++T 
Sbjct: 211 KSSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTC 270

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA-GKLFTFGDGT 431
           G G +  G LG     +  +PR V  ++ G  IS + CG  HT A+  A G+++ FG G+
Sbjct: 271 GAGAY--GQLGHGFCGNEMLPRMVM-ELMGSTISQVACGNRHTLAMVPARGRIYGFGLGS 327

Query: 432 FGALGHGDRSSTSVPREV 449
            G LG  +  S ++P+ V
Sbjct: 328 SGQLGTRNTKSLNLPQMV 345



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 13/145 (8%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           VF WG            N  ++   D  +   P  L++   L  + +ACG + +V +T +
Sbjct: 215 VFGWGRN----------NCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNE 264

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWG 373
           G +F+ G G+ G+LGHG   +   P+++  L GS I  VACG  HT A V   G +Y  G
Sbjct: 265 GGVFTCGAGAYGQLGHGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVPARGRIY--G 322

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSG 398
            G+ + G LG  +  S  +P+ V G
Sbjct: 323 FGLGSSGQLGTRNTKSLNLPQMVIG 347


>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1070

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 165/336 (49%), Gaps = 36/336 (10%)

Query: 317 IFSWGEGSGGKLG-HGVEADV---SYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           +FSWG    G+LG  G+  DV   S P+ + AL G  I  ++CG  HTC +   G +   
Sbjct: 3   VFSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMMC 62

Query: 373 GDGIHNLGLLGQV---SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
             G ++ G LGQ    SE++H +P       E L I+ + CG  HT A+T  G++  +G 
Sbjct: 63  --GANDRGQLGQDRPGSELAH-VPAT-----ETLVITQVSCGNDHTLAVTDRGQVLGWGR 114

Query: 430 GTFG--ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
              G   L  GD      PR +++L   +    +CG  H+ A+                +
Sbjct: 115 NDRGQCGLSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTR------------DGR 162

Query: 488 LFTWGDGAEGQLGHGDAEPRVV----PLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
           +F WGD + GQLG G A  R +    P  +     +   ++ACG   + AL+ +G VF  
Sbjct: 163 IFAWGDNSFGQLGIG-APGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGW 221

Query: 544 GSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
           G  + GQLG   +  +  PT ++ N+K + ++ IACG  + A++++   ++ +G+G+ GQ
Sbjct: 222 GKNNCGQLGLGTTEDRVSPTPLK-NLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQ 280

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           LGHG + N+  P  V+     ++  V CG   T  +
Sbjct: 281 LGHGSHSNEVNPRSVQGFLGSEITQVACGRQHTLVL 316



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 134/279 (48%), Gaps = 22/279 (7%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG--HGVEADVS 337
           DR  + L  V  +T  L    ++CG+ H + VT +GQ+  WG    G+ G   G   D  
Sbjct: 73  DRPGSELAHV-PATETLVITQVSCGNDHTLAVTDRGQVLGWGRNDRGQCGLSTGDSEDKR 131

Query: 338 YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD---GIHNLGLLGQVSEISHWIPR 394
            P+ + +L+   +  VACG  H+ A+T  G ++ WGD   G   +G  G+     H  P+
Sbjct: 132 KPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIGAPGRTLYRDH--PQ 189

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           ++S  + G+ I  + CG WH+ A++ +G +F +G    G LG G       P  ++ LK 
Sbjct: 190 QLS-SLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGTTEDRVSPTPLKNLKT 248

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
            +    +CG  +TA +    G            LF +G G+EGQLGHG     V P  V+
Sbjct: 249 KQVKYIACGQNYTAILTASGG------------LFLFGQGSEGQLGHGSHSNEVNPRSVQ 296

Query: 515 VSDDISFCKVACGHSITIALTA-TGQVFSMGSADYGQLG 552
                   +VACG   T+ L   TG+ FS+G    GQLG
Sbjct: 297 GFLGSEITQVACGRQHTLVLEGRTGRFFSLGQGSKGQLG 335



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 164/362 (45%), Gaps = 27/362 (7%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           VF WG    +G LG +  G ++ S        P+ + +      + I+CG +H  ++ + 
Sbjct: 3   VFSWG-CTQDGQLGISGLGDDVPSLSS-----PREVPALAGKQIREISCGLRHTCVLLRD 56

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           G +   G    G+LG   +   S    + A     I  V+CG  HT AVT  G +  WG 
Sbjct: 57  GTVMMCGANDRGQLGQ--DRPGSELAHVPATETLVITQVSCGNDHTLAVTDRGQVLGWGR 114

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
                  L          PR +   +   Q++ + CG  H+ A+T  G++F +GD +FG 
Sbjct: 115 NDRGQCGLSTGDSEDKRKPRFLK-SLSSCQVAQVACGSMHSMALTRDGRIFAWGDNSFGQ 173

Query: 435 LGHGDRSSTSV---PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           LG G    T     P+++ +L  +     +CG WH+ A+       SG+       +F W
Sbjct: 174 LGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFAL-----SVSGA-------VFGW 221

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           G    GQLG G  E RV P  +K         +ACG + T  LTA+G +F  G    GQL
Sbjct: 222 GKNNCGQLGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQL 281

Query: 552 GSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKS-EVYTWGKGANGQLGHGDNE 609
           G    + +  P  ++G +    I  +ACG  H  V+  ++   ++ G+G+ GQLG  ++ 
Sbjct: 282 GHGSHSNEVNPRSVQGFLGSE-ITQVACGRQHTLVLEGRTGRFFSLGQGSKGQLGLDNDS 340

Query: 610 NK 611
           +K
Sbjct: 341 SK 342



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 138/288 (47%), Gaps = 28/288 (9%)

Query: 369 LYTWG---DGIHNLGLLGQVSEI-SHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
           +++WG   DG   LG+ G   ++ S   PR+V   + G QI  I CG  HT  +   G +
Sbjct: 3   VFSWGCTQDG--QLGISGLGDDVPSLSSPREVPA-LAGKQIREISCGLRHTCVLLRDGTV 59

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
              G    G LG  DR  + +   V   + L     SCG  HT A+ +            
Sbjct: 60  MMCGANDRGQLGQ-DRPGSELAH-VPATETLVITQVSCGNDHTLAVTDRG---------- 107

Query: 485 SKKLFTWGDGAEGQLG--HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
             ++  WG    GQ G   GD+E +  P  +K        +VACG   ++ALT  G++F+
Sbjct: 108 --QVLGWGRNDRGQCGLSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFA 165

Query: 543 MGSADYGQLG--SPGST--GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            G   +GQLG  +PG T     P ++  ++    I  +ACG +H   +S    V+ WGK 
Sbjct: 166 WGDNSFGQLGIGAPGRTLYRDHPQQLS-SLPGVPIRRLACGGWHSFALSVSGAVFGWGKN 224

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSI 646
             GQLG G  E++ +PT ++ L+ KQVK + CG N+TA +    G+ +
Sbjct: 225 NCGQLGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFL 272



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 185/427 (43%), Gaps = 37/427 (8%)

Query: 215 GLDDANSRSSTADSFRISLSSA-VSSSSQGSCHE-DFDGLGDVFIWGEGLGNGLLGGAVN 272
           GL   +S       F  SLSS  V+  + GS H       G +F WG+    G LG    
Sbjct: 121 GLSTGDSEDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWGDN-SFGQLGIGAP 179

Query: 273 GVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV 332
           G  +     RD   P+ L S   +  + +ACG  H+  ++  G +F WG+ + G+LG G 
Sbjct: 180 GRTL----YRDH--PQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGT 233

Query: 333 EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI 392
             D   P  +  L    +  +ACG+ +T  +T SG L+ +G G  + G LG  S  +   
Sbjct: 234 TEDRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQG--SEGQLGHGSHSNEVN 291

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITS-AGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
           PR V G + G +I+ + CG  HT  +    G+ F+ G G+ G LG  + SS S    V  
Sbjct: 292 PRSVQGFL-GSEITQVACGRQHTLVLEGRTGRFFSLGQGSKGQLGLDNDSSKSCASPVPG 350

Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPL 511
             E  +    C     +  + +    +G  G  S  + + G+  +  L   +A P + P+
Sbjct: 351 PWEAPSSTEGCSNGEESRSI-IGSIFAG--GDQSFCIVSRGNDPDHPLDFREAIPSIEPV 407

Query: 512 CV------KVSD--------------DISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
            +      +VS+              +++    AC ++  +    +G +F  G    GQL
Sbjct: 408 VLTKDLLQEVSESSPLLEPSKAVQTLEMALSSPACLNASFLVGAGSGGLFLFGQGSEGQL 467

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS-EVYTWGKGANGQLGHGDNEN 610
           G    + +   R   +     I  +ACG  H  V+  ++   Y+ G+G+ GQLG  +  +
Sbjct: 468 GHGSHSNEVNPRSVKDFLGNEITQVACGRQHTLVLEGRTGGFYSLGQGSKGQLGLDNGSS 527

Query: 611 KQTPTLV 617
           K   +LV
Sbjct: 528 KSCASLV 534


>gi|148672794|gb|EDL04741.1| mCG16651 [Mus musculus]
          Length = 462

 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 183/360 (50%), Gaps = 29/360 (8%)

Query: 287 PKVLES-TVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
           P+ L++ T  ++    A G  H++L+    +++S G+ S G+LG   +     P+ I AL
Sbjct: 12  PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
           N  ++ +V+CG+ H+ AV   G ++ WG G      +G+  EIS ++P K+   + G++I
Sbjct: 72  NDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEIS-FMPTKIKA-LAGIKI 129

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS-STSVPREVETLKELKTVMASCGV 464
             + CG +H+ A++  G +F++G  + G LG G  S S ++P++V++L+ +     + G 
Sbjct: 130 IQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGG 189

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQL---GHGDAEPRVVPLCVKVSDDISF 521
            H+ A+       +G++       F WG    GQL   G+   E    P  +    ++S 
Sbjct: 190 THSFAL-----SLTGTS-------FGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSV 237

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGS 580
             ++CG+  T  LT  GQVF+ G    GQL  SP S  + P  IEG I  R +  I C S
Sbjct: 238 IYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEG-IGGR-VSQIECAS 295

Query: 581 YH-IAVVSSKSEVYTWGKG----ANGQLGHGDNENKQTPTLVEA--LRDKQVKSVVCGSN 633
           YH IA V +  +V + G+G    +N        EN     L+ A  L D +VK +  G++
Sbjct: 296 YHTIAYVYTTGQVVSLGRGPSHTSNPTHQEAPAENSDITCLLAAEDLVDIEVKDIFAGAH 355



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 119/252 (47%), Gaps = 19/252 (7%)

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
           PR++     G+++     G  H+  + S  ++++ GD ++G LG     ST  P  ++ L
Sbjct: 12  PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVPL 511
            +L   + SCG  H+ A+                K+F WG G+EGQLG G+  E   +P 
Sbjct: 72  NDLHVDLVSCGKEHSVAVCH------------KGKVFAWGAGSEGQLGIGEFKEISFMPT 119

Query: 512 CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ--LGSPGSTGKFPTRIEGNIK 569
            +K    I   +V+CGH  ++AL+  G VFS G    GQ  LG    +   P +++ +++
Sbjct: 120 KIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVK-SLE 178

Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQT---PTLVEALRDKQVK 626
              +  +A G  H   +S     + WG   +GQL    N+ K+    P  + AL++  V 
Sbjct: 179 GIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVI 238

Query: 627 SVVCGSNFTAAI 638
            + CG   TA +
Sbjct: 239 YISCGYEHTAVL 250



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 116/253 (45%), Gaps = 18/253 (7%)

Query: 227 DSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALL 286
           +   + L S     S   CH+     G VF WG G    L  G     EIS        +
Sbjct: 72  NDLHVDLVSCGKEHSVAVCHK-----GKVFAWGAGSEGQLGIGEFK--EIS-------FM 117

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDAL 345
           P  +++   +    ++CG  H++ +++ G +FSWG  S G+LG G  +   + P+ + +L
Sbjct: 118 PTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL 177

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQ 404
            G  +  VA G  H+ A++L+G  + WG      L L G   +   + P  + G ++ L 
Sbjct: 178 EGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSI-GALKNLS 236

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +  I CG  HTA +T  G++FTFG  + G L    RS    P+ +E +   +     C  
Sbjct: 237 VIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECAS 295

Query: 465 WHTAAIVEVAGKT 477
           +HT A V   G+ 
Sbjct: 296 YHTIAYVYTTGQV 308



 Score = 47.0 bits (110), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 1/87 (1%)

Query: 561 PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           P R++       +   A G +H  ++ S   VY+ G  + GQLG   +++ + P  ++AL
Sbjct: 12  PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71

Query: 621 RDKQVKSVVCGSNFTAAICLHKGVSIA 647
            D  V  V CG   + A+C HKG   A
Sbjct: 72  NDLHVDLVSCGKEHSVAVC-HKGKVFA 97


>gi|403330678|gb|EJY64235.1| hypothetical protein OXYTRI_24854 [Oxytricha trifallax]
          Length = 1365

 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 177/401 (44%), Gaps = 59/401 (14%)

Query: 254 DVFIWGE------GLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
           ++F WG       GLG   +G +                P     T  +  + ++CG +H
Sbjct: 83  EIFSWGSDQAGQLGLGQSQIGKSY---------------PVPRYCTYNIGIKYVSCGDEH 127

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-----PKLIDALNGSNIHMVACGEFHTCA 362
           A  +T    ++S G  + G+LG G   D+S      P L++AL       +ACG  HT  
Sbjct: 128 AAFITTGNMVYSMGSNTNGQLGVG---DMSLKMKNSPMLVEALMDQKPISIACGANHTLV 184

Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL----QISSICCGPWHTAAI 418
            T  GD+Y+WG GI   G LG  +    ++P+ +    + L    Q+  +  G   +A +
Sbjct: 185 CTERGDVYSWGQGI--FGALGAGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSAIL 242

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
             +G+++T G    G LG G R   ++P  ++   E +  M +CG  H   + +      
Sbjct: 243 DQSGRVYTCGQNDAGQLGIGGRDQENIPISIKKFPE-RVSMIACGQMHLLMLTKQG---- 297

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA-T 537
                    +++ G  + GQLG  +      PL ++    I    VA G S + +++  +
Sbjct: 298 --------TVYSCGANSFGQLGLNNKRNSSSPLLIQDISHIPMRYVAAG-SFSASISYDS 348

Query: 538 GQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
           G ++  GS  +G+  +P         I+G         ++ G++    V+    VY+WG 
Sbjct: 349 GDLYLWGSGVFGEFLTPHRV----KTIKG-----MTVSVSIGNHFGIAVNQDGIVYSWGH 399

Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             +G+LG GD + + TP ++  L DK V  V CG NF+ A+
Sbjct: 400 NNSGELGQGDFDERPTPQIINQLNDKIVTLVSCGRNFSIAL 440



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 144/331 (43%), Gaps = 47/331 (14%)

Query: 243 GSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIA 302
           G  H  F   G++        NG LG     +++ ++       P ++E+ +     SIA
Sbjct: 124 GDEHAAFITTGNMVYSMGSNTNGQLGVGDMSLKMKNS-------PMLVEALMDQKPISIA 176

Query: 303 CGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI----DALN-GSNIHMVACGE 357
           CG+ H ++ T++G ++SWG+G  G LG G   D   PKLI    D L+  S +  V+ G 
Sbjct: 177 CGANHTLVCTERGDVYSWGQGIFGALGAGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGM 236

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
             +  +  SG +YT G    + G LG        IP  +    E  ++S I CG  H   
Sbjct: 237 RFSAILDQSGRVYTCGQN--DAGQLGIGGRDQENIPISIKKFPE--RVSMIACGQMHLLM 292

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG-------------- 463
           +T  G +++ G  +FG LG  ++ ++S P  ++ +  +     + G              
Sbjct: 293 LTKQGTVYSCGANSFGQLGLNNKRNSSSPLLIQDISHIPMRYVAAGSFSASISYDSGDLY 352

Query: 464 VWHTAAIVE---------VAGKTSGSN-----GLSSKK---LFTWGDGAEGQLGHGDAEP 506
           +W +    E         + G T   +     G++  +   +++WG    G+LG GD + 
Sbjct: 353 LWGSGVFGEFLTPHRVKTIKGMTVSVSIGNHFGIAVNQDGIVYSWGHNNSGELGQGDFDE 412

Query: 507 RVVPLCVKVSDDISFCKVACGHSITIALTAT 537
           R  P  +   +D     V+CG + +IAL  T
Sbjct: 413 RPTPQIINQLNDKIVTLVSCGRNFSIALGQT 443


>gi|393912010|gb|EJD76548.1| hect domain and RLD 4, variant [Loa loa]
          Length = 1017

 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 170/348 (48%), Gaps = 36/348 (10%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL-IDALNGSNIHMVACG 356
            +++A G KH + +   G+++S G    G+LG G   + SY    +   N   I  ++ G
Sbjct: 49  VKAVASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAG 108

Query: 357 EFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
             H+ AV+  G L+ WG   H  L + G +  IS   P++V    E +Q++   CG  HT
Sbjct: 109 RSHSMAVSDDGRLFAWGSNSHGQLAMSGDIL-ISD-TPKRVPSLPETVQVA---CGASHT 163

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            ++   G++F +G  + G + H        P EVE    +  +  S G   T A+     
Sbjct: 164 VSLNGGGRVFIWGQQSDGRIRHS-------PAEVELFVSVPIIQISAGNLFTMALT---- 212

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
                   +S  LF WG   EGQLG+      + P   +V +  S   V CG S +IALT
Sbjct: 213 --------ASGTLFAWGRNEEGQLGNFTNRDVINPR--EVPNINSVVVVECGDSHSIALT 262

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEG--NIKHRYIEDIACGSYHIAVVSSKSEVY 593
             G+VFS GS  +GQLG  G   +    + G   +   ++  IACG  H  VV++  +++
Sbjct: 263 HEGRVFSCGSDSFGQLGC-GQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVVAN-GKMH 320

Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
           T+G  +NGQLGHG+  N+ TP +++++ +  V SV  G  +  + CL 
Sbjct: 321 TFGLNSNGQLGHGNTRNQITPRMIDSVEN--VASVFAG--WDQSFCLQ 364



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 111/230 (48%), Gaps = 24/230 (10%)

Query: 232 SLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE 291
           SL   V  +   S     +G G VFIWG+                  +D R    P  +E
Sbjct: 149 SLPETVQVACGASHTVSLNGGGRVFIWGQ-----------------QSDGRIRHSPAEVE 191

Query: 292 STVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH 351
             V +    I+ G+   + +T  G +F+WG    G+LG+    DV  P+ +  +N  ++ 
Sbjct: 192 LFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNFTNRDVINPREVPNIN--SVV 249

Query: 352 MVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC 410
           +V CG+ H+ A+T  G +++ G D    LG  GQ S  S    R ++ +M G  ++ I C
Sbjct: 250 VVECGDSHSIALTHEGRVFSCGSDSFGQLG-CGQPSR-SQNCMRGIT-EMLGSHVTRIAC 306

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
           G  HT  + + GK+ TFG  + G LGHG+  +   PR +++++ + +V A
Sbjct: 307 GRCHTIVVAN-GKMHTFGLNSNGQLGHGNTRNQITPRMIDSVENVASVFA 355



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 114/267 (42%), Gaps = 35/267 (13%)

Query: 383 GQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSS 442
            Q+    H +    +GQ  G+ + ++  G  HT  + + GK+++ G    G LG G    
Sbjct: 28  AQMMLFPHLVYGAPTGQ-HGVTVKAVASGEKHTLFLANDGKVWSCGSNYNGELGRGG--- 83

Query: 443 TSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGH 501
                    +KE    +    + +   I++++   S S  +S   +LF WG  + GQL  
Sbjct: 84  ---------VKEGSYTIYPVHISNAVRIIQISAGRSHSMAVSDDGRLFAWGSNSHGQLAM 134

Query: 502 -GDA----EPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGS 556
            GD      P+ VP   +        +VACG S T++L   G+VF  G        S G 
Sbjct: 135 SGDILISDTPKRVPSLPET------VQVACGASHTVSLNGGGRVFIWGQQ------SDGR 182

Query: 557 TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTL 616
               P  +E  +    I+ I+ G+     +++   ++ WG+   GQLG+  N +   P  
Sbjct: 183 IRHSPAEVELFVSVPIIQ-ISAGNLFTMALTASGTLFAWGRNEEGQLGNFTNRDVINPRE 241

Query: 617 VEALRDKQVKSVVCGSNFTAAICLHKG 643
           V  +    V  V CG + + A+  H+G
Sbjct: 242 VPNI--NSVVVVECGDSHSIALT-HEG 265


>gi|393912009|gb|EJD76547.1| hect domain and RLD 4 [Loa loa]
          Length = 1043

 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 170/348 (48%), Gaps = 36/348 (10%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL-IDALNGSNIHMVACG 356
            +++A G KH + +   G+++S G    G+LG G   + SY    +   N   I  ++ G
Sbjct: 49  VKAVASGEKHTLFLANDGKVWSCGSNYNGELGRGGVKEGSYTIYPVHISNAVRIIQISAG 108

Query: 357 EFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
             H+ AV+  G L+ WG   H  L + G +  IS   P++V    E +Q++   CG  HT
Sbjct: 109 RSHSMAVSDDGRLFAWGSNSHGQLAMSGDIL-ISD-TPKRVPSLPETVQVA---CGASHT 163

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            ++   G++F +G  + G + H        P EVE    +  +  S G   T A+     
Sbjct: 164 VSLNGGGRVFIWGQQSDGRIRHS-------PAEVELFVSVPIIQISAGNLFTMALT---- 212

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
                   +S  LF WG   EGQLG+      + P   +V +  S   V CG S +IALT
Sbjct: 213 --------ASGTLFAWGRNEEGQLGNFTNRDVINPR--EVPNINSVVVVECGDSHSIALT 262

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEG--NIKHRYIEDIACGSYHIAVVSSKSEVY 593
             G+VFS GS  +GQLG  G   +    + G   +   ++  IACG  H  VV++  +++
Sbjct: 263 HEGRVFSCGSDSFGQLGC-GQPSRSQNCMRGITEMLGSHVTRIACGRCHTIVVAN-GKMH 320

Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
           T+G  +NGQLGHG+  N+ TP +++++ +  V SV  G  +  + CL 
Sbjct: 321 TFGLNSNGQLGHGNTRNQITPRMIDSVEN--VASVFAG--WDQSFCLQ 364



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 111/230 (48%), Gaps = 24/230 (10%)

Query: 232 SLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE 291
           SL   V  +   S     +G G VFIWG+                  +D R    P  +E
Sbjct: 149 SLPETVQVACGASHTVSLNGGGRVFIWGQ-----------------QSDGRIRHSPAEVE 191

Query: 292 STVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH 351
             V +    I+ G+   + +T  G +F+WG    G+LG+    DV  P+ +  +N  ++ 
Sbjct: 192 LFVSVPIIQISAGNLFTMALTASGTLFAWGRNEEGQLGNFTNRDVINPREVPNIN--SVV 249

Query: 352 MVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC 410
           +V CG+ H+ A+T  G +++ G D    LG  GQ S  S    R ++ +M G  ++ I C
Sbjct: 250 VVECGDSHSIALTHEGRVFSCGSDSFGQLG-CGQPSR-SQNCMRGIT-EMLGSHVTRIAC 306

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
           G  HT  + + GK+ TFG  + G LGHG+  +   PR +++++ + +V A
Sbjct: 307 GRCHTIVVAN-GKMHTFGLNSNGQLGHGNTRNQITPRMIDSVENVASVFA 355



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 114/267 (42%), Gaps = 35/267 (13%)

Query: 383 GQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSS 442
            Q+    H +    +GQ  G+ + ++  G  HT  + + GK+++ G    G LG G    
Sbjct: 28  AQMMLFPHLVYGAPTGQ-HGVTVKAVASGEKHTLFLANDGKVWSCGSNYNGELGRGG--- 83

Query: 443 TSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGH 501
                    +KE    +    + +   I++++   S S  +S   +LF WG  + GQL  
Sbjct: 84  ---------VKEGSYTIYPVHISNAVRIIQISAGRSHSMAVSDDGRLFAWGSNSHGQLAM 134

Query: 502 -GDA----EPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGS 556
            GD      P+ VP   +        +VACG S T++L   G+VF  G        S G 
Sbjct: 135 SGDILISDTPKRVPSLPET------VQVACGASHTVSLNGGGRVFIWGQQ------SDGR 182

Query: 557 TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTL 616
               P  +E  +    I+ I+ G+     +++   ++ WG+   GQLG+  N +   P  
Sbjct: 183 IRHSPAEVELFVSVPIIQ-ISAGNLFTMALTASGTLFAWGRNEEGQLGNFTNRDVINPRE 241

Query: 617 VEALRDKQVKSVVCGSNFTAAICLHKG 643
           V  +    V  V CG + + A+  H+G
Sbjct: 242 VPNI--NSVVVVECGDSHSIALT-HEG 265


>gi|313236427|emb|CBY11744.1| unnamed protein product [Oikopleura dioica]
          Length = 516

 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 198/429 (46%), Gaps = 41/429 (9%)

Query: 225 TADSFRISLSSAVSSSSQGSCHEDFDGLG-----DVFIWGEGLGNGLLGGAVNGVEISSA 279
           TAD   +++ S+++++S   C++     G     +VF WG            +  +++ A
Sbjct: 99  TADQSALTILSSIAAAS---CNDGGTNGGPSFAEEVFCWGSN----------SSQQLTDA 145

Query: 280 DRRDALL-PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY 338
              D LL P+ L  +V     S+  G      V   G + + G+GS G+LG+G  A  S 
Sbjct: 146 TPEDKLLYPRNL--SVYGKVMSMTAGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSS 203

Query: 339 PKLIDALNGSNIHMVACG-EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
           P LI+        + + G + H+ A+  +G ++TWGDG  + G LG     +   P+ + 
Sbjct: 204 PILIEFPAPVRKILTSKGSDGHSIAIGKNGQIWTWGDG--DYGKLGHGDSTTQKSPKLIE 261

Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
             +    I    CG  H+AA+  AG L+ +G+G +G LG GD    SVP +V  ++E   
Sbjct: 262 A-LASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIREASQ 320

Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
           V+  CG  HT  ++   G+T          ++++G    G+LGHGD   +  P  +    
Sbjct: 321 VV--CGFNHTV-VLSTDGRT----------VWSFGAAENGKLGHGDTNRQFRPKIIDALQ 367

Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIA 577
            ++  ++A G  I+ A+T  G ++  G       GS   T   P  + G +  R + DIA
Sbjct: 368 GLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSDETFMLPKVVRG-LSGRVVIDIA 426

Query: 578 CGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTA 636
            G  H+  ++    V+TWG   NGQ G G      T P +V+ L    ++ V  G+  T 
Sbjct: 427 VGENHVVALTKDGLVFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHT- 485

Query: 637 AICLHKGVS 645
            +C  +  S
Sbjct: 486 FVCFWRNTS 494



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 124/254 (48%), Gaps = 18/254 (7%)

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
           ++ S+  G + T A+ S G +   G G++G LG+G  +S+S P  +E    ++ ++ S G
Sbjct: 162 KVMSMTAGQYCTFAVLSNGTVMANGKGSYGRLGNGASASSSSPILIEFPAPVRKILTSKG 221

Query: 464 V-WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
              H+ AI        G NG    +++TWGDG  G+LGHGD+  +  P  ++        
Sbjct: 222 SDGHSIAI--------GKNG----QIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVIV 269

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSY 581
              CGH  + A+   G ++  G  DYG+LG   +  +  P ++      R    + CG  
Sbjct: 270 DADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSVPVQVP---DIREASQVVCGFN 326

Query: 582 HIAVVSSKSE-VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           H  V+S+    V+++G   NG+LGHGD   +  P +++AL+   +  +  G+  +AA+  
Sbjct: 327 HTVVLSTDGRTVWSFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAVTR 386

Query: 641 HKGVSIADHSICSG 654
              + +     C G
Sbjct: 387 EGALYVWGFGPCLG 400


>gi|410957262|ref|XP_003985250.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Felis catus]
          Length = 1031

 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 168/344 (48%), Gaps = 28/344 (8%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G +H++L+   G + S G+ S G+LG         PK I AL    + +V+CG+ H+ 
Sbjct: 40  ASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVELVSCGKEHSL 99

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV   G ++ WG G      +G+  EI+  IP+K+   + G++I  + CG +H+ A++  
Sbjct: 100 AVCYKGRVFAWGAGSEGQLGIGEFKEIN-LIPQKIK-TLTGIKIIQVSCGNYHSLALSED 157

Query: 422 GKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           G++F++G  + G LG G +  S + P+ V +L  +     + G  H+ A+       SG+
Sbjct: 158 GQVFSWGSNSHGQLGLGKELPSQASPQRVRSLDGIPLAQVAAGGAHSFAL-----SLSGT 212

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVV---PLCVKVSDDISFCKVACGHSITIALTAT 537
           +       F WG    GQL    +   V    P  V     +    ++CGH  T  LT  
Sbjct: 213 S-------FGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHEHTAVLTQN 265

Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTW 595
           G+VF+ G    GQLG SP +    P  +EG      +  I CGSYH +A V +  +V ++
Sbjct: 266 GKVFTFGDNSCGQLGHSPTAEKTGPQLMEG--IEGLVSQIDCGSYHTLAYVYTTGQVVSF 323

Query: 596 GKGANGQ--LGHGD--NENKQTPTLV--EALRDKQVKSVVCGSN 633
           G+G + +    H +   EN     L+  E L D QVK +  G++
Sbjct: 324 GRGPSCKSCSNHPELLTENTDVTCLISAERLVDVQVKHIFAGTH 367



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 139/264 (52%), Gaps = 22/264 (8%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDAL 345
           PK +++   L  + ++CG +H++ V  +G++F+WG GS G+LG G   +++  P+ I  L
Sbjct: 77  PKPIQALETLRVELVSCGKEHSLAVCYKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTL 136

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGLQ 404
            G  I  V+CG +H+ A++  G +++WG   H  G LG   E+ S   P++V   ++G+ 
Sbjct: 137 TGIKIIQVSCGNYHSLALSEDGQVFSWGSNSH--GQLGLGKELPSQASPQRVRS-LDGIP 193

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGAL---GHGDRSSTSVPREVETLKELKTVMAS 461
           ++ +  G  H+ A++ +G  F +G    G L   G      +  PR V  LK L  V  S
Sbjct: 194 LAQVAAGGAHSFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYIS 253

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
           CG  HTA + +        NG    K+FT+GD + GQLGH     +  P  ++  + +  
Sbjct: 254 CGHEHTAVLTQ--------NG----KVFTFGDNSCGQLGHSPTAEKTGPQLMEGIEGL-V 300

Query: 522 CKVACGHSITIA-LTATGQVFSMG 544
            ++ CG   T+A +  TGQV S G
Sbjct: 301 SQIDCGSYHTLAYVYTTGQVVSFG 324



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 131/254 (51%), Gaps = 20/254 (7%)

Query: 227 DSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLG-GAVNGVEISSADRRDAL 285
           ++ R+ L S     S   C++     G VF WG G   G LG G    +          L
Sbjct: 84  ETLRVELVSCGKEHSLAVCYK-----GRVFAWGAG-SEGQLGIGEFKEIN---------L 128

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDA 344
           +P+ +++   +    ++CG+ H++ +++ GQ+FSWG  S G+LG G E    + P+ + +
Sbjct: 129 IPQKIKTLTGIKIIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELPSQASPQRVRS 188

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
           L+G  +  VA G  H+ A++LSG  + WG +    L   G    +  + PR VS  ++ L
Sbjct: 189 LDGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSA-LKTL 247

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
            +  I CG  HTA +T  GK+FTFGD + G LGH   +  + P+ +E ++ L + +  CG
Sbjct: 248 GVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHSPTAEKTGPQLMEGIEGLVSQI-DCG 306

Query: 464 VWHTAAIVEVAGKT 477
            +HT A V   G+ 
Sbjct: 307 SYHTLAYVYTTGQV 320



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 112/245 (45%), Gaps = 23/245 (9%)

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G ++     G  H+  + S G + + GD + G LG         P+ ++ L+ L+  + S
Sbjct: 33  GPELRQAASGERHSLLLLSDGAVHSCGDNSRGQLGRRGLQREEQPKPIQALETLRVELVS 92

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVPLCVKVSDDIS 520
           CG  H+ A+                ++F WG G+EGQLG G+  E  ++P  +K    I 
Sbjct: 93  CGKEHSLAVC------------YKGRVFAWGAGSEGQLGIGEFKEINLIPQKIKTLTGIK 140

Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLG----SPGSTGKFPTRIEGNIKHRYIEDI 576
             +V+CG+  ++AL+  GQVFS GS  +GQLG     P      P R+  ++    +  +
Sbjct: 141 IIQVSCGNYHSLALSEDGQVFSWGSNSHGQLGLGKELPSQAS--PQRVR-SLDGIPLAQV 197

Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLG-HGDNENKQT--PTLVEALRDKQVKSVVCGSN 633
           A G  H   +S     + WG    GQL   G N   Q+  P  V AL+   V  + CG  
Sbjct: 198 AAGGAHSFALSLSGTSFGWGSNNAGQLAFFGSNVPVQSYKPRSVSALKTLGVVYISCGHE 257

Query: 634 FTAAI 638
            TA +
Sbjct: 258 HTAVL 262



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 55/90 (61%), Gaps = 2/90 (2%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+ + +   L    I+CG +H  ++T+ G++F++G+ S G+LGH   A+ + P+L++ + 
Sbjct: 238 PRSVSALKTLGVVYISCGHEHTAVLTQNGKVFTFGDNSCGQLGHSPTAEKTGPQLMEGIE 297

Query: 347 GSNIHMVACGEFHTCA-VTLSGDLYTWGDG 375
           G  +  + CG +HT A V  +G + ++G G
Sbjct: 298 GL-VSQIDCGSYHTLAYVYTTGQVVSFGRG 326


>gi|225438323|ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
 gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera]
          Length = 420

 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 174/365 (47%), Gaps = 46/365 (12%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY---PKLIDALNGSNIHMVACG 356
           +IACG  H + +T+ G +++ G    G+LG  V  D +Y   P  + AL    IH +A G
Sbjct: 70  AIACGGAHTLFLTESGCVYAAGLNDFGQLG--VSVDKNYTTEPLEVSALPKKIIH-IAAG 126

Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            +H+ A+T  G+LY WG   +    LG+ +  +  +P KV   + G+ I  +  G  H+ 
Sbjct: 127 YYHSAAITADGELYMWGKNSNGQLGLGKKAANAVSVPSKVE-CLNGISIKMVALGSEHSV 185

Query: 417 AITSAGKLFTFGDGTFGALGHGDRSST---------SVPREVETLKELKTVMASCGVWHT 467
           A T  G+  ++G G  G LGHG  SS            PR +  L+ +K    + G+ H+
Sbjct: 186 AATDQGEALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHS 245

Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK-VAC 526
           A I E        NG     +F +G+ A  + G  +A+    P  +    ++ + K VAC
Sbjct: 246 ACIDE--------NG----SVFIFGERAMDKFGFREAKNATAPSMI---SELPYSKQVAC 290

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSP-GSTGKFPTRIEGNIKHRYIEDIACGSYHIAV 585
           G   T  ++++G++F+ GS + G LG     T  FP RIEG      +  ++CG  H A 
Sbjct: 291 GGYHTCVISSSGELFTWGSNENGCLGMGFMETIHFPERIEGPFSKNPVSQVSCGWKHTAA 350

Query: 586 VSSKSEVYTWGKGAN------------GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSN 633
           + S+  V+TWG G +            GQLG G + +   P +VE     +   V CG N
Sbjct: 351 I-SEGNVFTWGWGGSYGTFSDDGHSSGGQLGQGSDVDHIKPKMVEFEESVRALQVSCGFN 409

Query: 634 FTAAI 638
            T AI
Sbjct: 410 HTGAI 414



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 149/333 (44%), Gaps = 33/333 (9%)

Query: 320 WGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNL 379
           WG G  G+LG G       P +  A +  ++  +ACG  HT  +T SG +Y    G+++ 
Sbjct: 38  WGNGDFGRLGLGSLESQWRPAVCSAFDHHSLVAIACGGAHTLFLTESGCVYA--AGLNDF 95

Query: 380 GLLGQVSEISHWI-PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG 438
           G LG   + ++   P +VS   +  +I  I  G +H+AAIT+ G+L+ +G  + G LG G
Sbjct: 96  GQLGVSVDKNYTTEPLEVSALPK--KIIHIAAGYYHSAAITADGELYMWGKNSNGQLGLG 153

Query: 439 DRS--STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
            ++  + SVP +VE L  +   M + G  H+ A  +              +  +WG G  
Sbjct: 154 KKAANAVSVPSKVECLNGISIKMVALGSEHSVAATD------------QGEALSWGAGGS 201

Query: 497 GQLGHGD---------AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           G+LGHG                P  ++  + I    VA G   +  +   G VF  G   
Sbjct: 202 GRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHSACIDENGSVFIFGERA 261

Query: 548 YGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             + G         P+ I    +  Y + +ACG YH  V+SS  E++TWG   NG LG G
Sbjct: 262 MDKFGFREAKNATAPSMIS---ELPYSKQVACGGYHTCVISSSGELFTWGSNENGCLGMG 318

Query: 607 DNENKQTPTLVEALRDKQ-VKSVVCGSNFTAAI 638
             E    P  +E    K  V  V CG   TAAI
Sbjct: 319 FMETIHFPERIEGPFSKNPVSQVSCGWKHTAAI 351



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 135/307 (43%), Gaps = 54/307 (17%)

Query: 253 GDVFIWGEGLGNGLLG---GAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAV 309
           G++++WG+   NG LG    A N V +          P  +E    +  + +A GS+H+V
Sbjct: 137 GELYMWGKN-SNGQLGLGKKAANAVSV----------PSKVECLNGISIKMVALGSEHSV 185

Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADV---------SYPKLIDALNGSNIHMVACGEFHT 360
             T QG+  SWG G  G+LGHG E+ +           P+LI  L G  +  VA G  H+
Sbjct: 186 AATDQGEALSWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLEGIKVKNVAAGLLHS 245

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
             +  +G ++ +G+    +   G     +   P  +S      Q++   CG +HT  I+S
Sbjct: 246 ACIDENGSVFIFGE--RAMDKFGFREAKNATAPSMISELPYSKQVA---CGGYHTCVISS 300

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVE-TLKELKTVMASCGVWHTAAIVEVAGKTSG 479
           +G+LFT+G    G LG G   +   P  +E    +      SCG  HTAAI E       
Sbjct: 301 SGELFTWGSNENGCLGMGFMETIHFPERIEGPFSKNPVSQVSCGWKHTAAISE------- 353

Query: 480 SNGLSSKKLFTWGDGAE------------GQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
                   +FTWG G              GQLG G     + P  V+  + +   +V+CG
Sbjct: 354 ------GNVFTWGWGGSYGTFSDDGHSSGGQLGQGSDVDHIKPKMVEFEESVRALQVSCG 407

Query: 528 HSITIAL 534
            + T A+
Sbjct: 408 FNHTGAI 414



 Score = 39.3 bits (90), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 2/129 (1%)

Query: 512 CVKVSDDISFCKVACGHSITIALTATGQVFS--MGSADYGQLGSPGSTGKFPTRIEGNIK 569
           C++VS      K+  G    ++ +   + F+   G+ D+G+LG      ++   +     
Sbjct: 5   CMRVSQSALQSKLGLGFCRRLSSSEPRKRFAALWGNGDFGRLGLGSLESQWRPAVCSAFD 64

Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVV 629
           H  +  IACG  H   ++    VY  G    GQLG   ++N  T  L  +   K++  + 
Sbjct: 65  HHSLVAIACGGAHTLFLTESGCVYAAGLNDFGQLGVSVDKNYTTEPLEVSALPKKIIHIA 124

Query: 630 CGSNFTAAI 638
            G   +AAI
Sbjct: 125 AGYYHSAAI 133


>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1379

 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 172/356 (48%), Gaps = 27/356 (7%)

Query: 285  LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
            LLP  ++      A +IA G  H V V + G +++WG    G+LG G  A    P  +  
Sbjct: 812  LLPVQVQGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQLGDGTTAQSLTPVQVQV 871

Query: 345  LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
                ++  +A G +H  A    G L+TW  G+++ G LG        +P +V G M+   
Sbjct: 872  QGLMDVTAMAAGGYHMAAAGQDGTLWTW--GLNSYGQLGGGPLSYRLLPVQVQGLMD--- 926

Query: 405  ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
            ++++  G +H AA    G L+T+G  ++G LG G  S   +P +V+ L  + T MA+ G 
Sbjct: 927  VTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQVQGLMSV-TAMAAGGY 985

Query: 465  WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
             H AA        +G +G     L+TWG  + GQLG G     + P+ V+V        +
Sbjct: 986  -HMAA--------AGQDG----TLWTWGLNSYGQLGGGPLSQSLTPVQVQVQGLTGVAAI 1032

Query: 525  ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYH 582
            A G S T+A+   G V+S G   YGQLG  G+T +   P +++G      +  I+ G  H
Sbjct: 1033 AAGFSHTLAVRQDGTVWSWGGNAYGQLGD-GTTAQSLTPVQVQGLTG---VTAISAGDAH 1088

Query: 583  IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               +     V+ WG+ + GQLG G   ++ TP  V+ L    V ++  GS  T A+
Sbjct: 1089 TVALRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTG--VIAIAAGSLHTVAL 1142



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 160/340 (47%), Gaps = 29/340 (8%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           +IA G   AV + + G +++WG  S G+LG+G       P+ +  L G  +  +A    H
Sbjct: 275 AIAAGGGFAVALRQDGTLWAWGSNSRGQLGNGTTFGSYRPEQVQGLTG--VTAIAASGIH 332

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           T A+   G L+ WG+  ++ G LG  +    + P +V G + G  +++I  G  +T A  
Sbjct: 333 TVALRQDGTLWAWGN--NSSGQLGDGTTTVRFTPVQVQG-LTG--VTAIAAGYLYTVASK 387

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G ++ +GD  +G LG G  +    P +V+ L  +  + A         +  VA K  G
Sbjct: 388 QDGTVWAWGDNEWGQLGDGTTTRRLTPVQVQGLTGVTAIAAGY-------LYTVASKQDG 440

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
           +       ++ WGD    QLG G    R  P  V+  + I+   +A  + +T+A+   G 
Sbjct: 441 T-------VWAWGDNKRSQLGEGAVSQRHTPGEVQGLEGIT--AIAASNLLTVAVRQDGT 491

Query: 540 VFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           V++ G    GQLG   +T +  P +++G      +  +A   YH+  V     V+ WG G
Sbjct: 492 VWAWGDNARGQLGDGTTTRRLTPVQVQGLAG---VTAVAASDYHLVAVRQDGTVWAWGVG 548

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             GQLG G   ++ TP  V+ L    V ++  GSN T A+
Sbjct: 549 FWGQLGDGTGMDRSTPVQVQGLTG--VTAIAAGSNHTVAL 586



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 159/377 (42%), Gaps = 51/377 (13%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           ++A    H V V + G +++WG G  G+LG G   D S P  +  L G  +  +A G  H
Sbjct: 525 AVAASDYHLVAVRQDGTVWAWGVGFWGQLGDGTGMDRSTPVQVQGLTG--VTAIAAGSNH 582

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           T A+   G ++ WG   +N G LG  +   H  P +V G    +   +I  G  HT A+ 
Sbjct: 583 TVALRQDGTVWAWG--FNNYGQLGDGTTAGHLTPVQVPGVTGAV---AIAAGGSHTVALL 637

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI--------- 470
             G ++T+G   +G LG G  +    P +V+ L ++  +  + G  HT A+         
Sbjct: 638 QDGTVWTWGYNIWGQLGDGTTTHRHSPVQVQGLADVIAIATNNG--HTVAVRQDGTVWTW 695

Query: 471 -------------------VEVAGKTSGSNGLSS----------KKLFTWGDGAEGQLGH 501
                              V+V G T  +  L+S          + L+ WGD   GQLG 
Sbjct: 696 GLNSSGQLGDGTTTQRLTPVQVHGLTDATAILTSSSQTVAMRQDRTLWAWGDNHWGQLGD 755

Query: 502 GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL-GSPGSTGKF 560
           G    R+ P+ V+   D++   +A G     A    G +++ G   YGQL G P S    
Sbjct: 756 GTTTRRLTPVQVQGLMDVT--AMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLL 813

Query: 561 PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           P +++G +       IA G  H   V     V+ WG   +GQLG G      TP  V+  
Sbjct: 814 PVQVQG-LTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQLGDGTTAQSLTPVQVQVQ 872

Query: 621 RDKQVKSVVCGSNFTAA 637
               V ++  G    AA
Sbjct: 873 GLMDVTAMAAGGYHMAA 889



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 155/342 (45%), Gaps = 37/342 (10%)

Query: 285  LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
            L P  ++   +    +IA G  H + V + G ++SWG  + G+LG G  A    P  +  
Sbjct: 1016 LTPVQVQVQGLTGVAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTTAQSLTPVQVQG 1075

Query: 345  LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
            L G  +  ++ G+ HT A+   G ++ WG   ++ G LG     +H   R    Q++GL 
Sbjct: 1076 LTG--VTAISAGDAHTVALRRDGTVWAWGR--NSWGQLGD-GTTTH---RATPVQVQGLT 1127

Query: 405  -ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
             + +I  G  HT A+   G ++ +G  ++G LG G  +  + P +V+ L  +  + A  G
Sbjct: 1128 GVIAIAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTGVIAIAA--G 1185

Query: 464  VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
              HT A+ +               ++ WG    GQLG G    R+ P   +V        
Sbjct: 1186 SLHTVALRQ------------DGTVWAWGFNDLGQLGDGTTTRRLTP--AQVQGLTGVTT 1231

Query: 524  VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-----PTRIEGNIKHRYIEDIAC 578
            +A G+  T A+   G  ++ G   +GQLG     G F     P +++G      +  +A 
Sbjct: 1232 IAAGYFHTAAVRQDGTAWTWGFNLWGQLGD----GTFTDRATPVQVQGLTG---VSALAA 1284

Query: 579  GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
            G  H  VV     V+ WG  +  QLG+G + ++ TP  VEAL
Sbjct: 1285 GYAHTVVVGEDGTVWAWGNNSGTQLGNGSSTDRSTPVQVEAL 1326



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 147/317 (46%), Gaps = 29/317 (9%)

Query: 300  SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
            +I+ G  H V + + G +++WG  S G+LG G     + P  +  L G  +  +A G  H
Sbjct: 1081 AISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTG--VIAIAAGSLH 1138

Query: 360  TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ-ISSICCGPWHTAAI 418
            T A+   G ++ WG   ++ G LG     +H   R    Q++GL  + +I  G  HT A+
Sbjct: 1139 TVALRQDGTVWAWGR--NSWGQLGD-GTTTH---RATPVQVQGLTGVIAIAAGSLHTVAL 1192

Query: 419  TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
               G ++ +G    G LG G  +    P +V+ L  + T+ A  G +HTAA+ +      
Sbjct: 1193 RQDGTVWAWGFNDLGQLGDGTTTRRLTPAQVQGLTGVTTIAA--GYFHTAAVRQ------ 1244

Query: 479  GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
                      +TWG    GQLG G    R  P  V+V        +A G++ T+ +   G
Sbjct: 1245 ------DGTAWTWGFNLWGQLGDGTFTDRATP--VQVQGLTGVSALAAGYAHTVVVGEDG 1296

Query: 539  QVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
             V++ G+    QLG+  ST +  P ++E  +   +   +A G +H   +S     + WG+
Sbjct: 1297 TVWAWGNNSGTQLGNGSSTDRSTPVQVE-ALTGAF--SLAAGRFHTVAMSPDGAGWGWGR 1353

Query: 598  GANGQLGHGDNENKQTP 614
               GQ+G G   ++ TP
Sbjct: 1354 NNLGQVGDGTTADRPTP 1370



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 143/324 (44%), Gaps = 27/324 (8%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           +IA G  + V   + G +++WG+    +LG G  +    P  +  L G  I  +A     
Sbjct: 425 AIAAGYLYTVASKQDGTVWAWGDNKRSQLGEGAVSQRHTPGEVQGLEG--ITAIAASNLL 482

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           T AV   G ++ WGD  +  G LG  +      P +V G + G  ++++    +H  A+ 
Sbjct: 483 TVAVRQDGTVWAWGD--NARGQLGDGTTTRRLTPVQVQG-LAG--VTAVAASDYHLVAVR 537

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G ++ +G G +G LG G     S P +V+ L  +  + A     HT A+ +       
Sbjct: 538 QDGTVWAWGVGFWGQLGDGTGMDRSTPVQVQGLTGVTAIAAGSN--HTVALRQ------- 588

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                   ++ WG    GQLG G     + P  V+V        +A G S T+AL   G 
Sbjct: 589 -----DGTVWAWGFNNYGQLGDGTTAGHLTP--VQVPGVTGAVAIAAGGSHTVALLQDGT 641

Query: 540 VFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           V++ G   +GQLG   +T +  P +++G      +  IA  + H   V     V+TWG  
Sbjct: 642 VWTWGYNIWGQLGDGTTTHRHSPVQVQGLAD---VIAIATNNGHTVAVRQDGTVWTWGLN 698

Query: 599 ANGQLGHGDNENKQTPTLVEALRD 622
           ++GQLG G    + TP  V  L D
Sbjct: 699 SSGQLGDGTTTQRLTPVQVHGLTD 722



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 152/345 (44%), Gaps = 29/345 (8%)

Query: 294 VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMV 353
           V+  A +IA G  H V  ++ G +++WG  S G+LG G       P  +  L G  +  V
Sbjct: 119 VMTGATAIAAGIYHTVAASQDGTVWTWGRNSSGQLGDGTSIQRFSPVQVQGLTG--VTAV 176

Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
           A G  H+ A+   G ++TWGD +  +G LG  +      P +V G    + IS+      
Sbjct: 177 AAGRNHSAALGQGGTVWTWGDNL--VGQLGDGTSTQRLTPVQVQGLTGVIAISANDS--- 231

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
            T A+   G ++ +G+ + G LG G  +    P +V  L  +  + A  G         V
Sbjct: 232 ETVALRQDGTVWAWGNNSSGQLGDGTTTVRFTPVQVLGLTGVTAIAAGGG-------FAV 284

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
           A +  G+       L+ WG  + GQLG+G       P  V+    ++    +  H  T+A
Sbjct: 285 ALRQDGT-------LWAWGSNSRGQLGNGTTFGSYRPEQVQGLTGVTAIAASGIH--TVA 335

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
           L   G +++ G+   GQLG   +T +F P +++G      +  IA G  +         V
Sbjct: 336 LRQDGTLWAWGNNSSGQLGDGTTTVRFTPVQVQGLTG---VTAIAAGYLYTVASKQDGTV 392

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           + WG    GQLG G    + TP  V+ L    V ++  G  +T A
Sbjct: 393 WAWGDNEWGQLGDGTTTRRLTPVQVQGLTG--VTAIAAGYLYTVA 435



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 111/256 (43%), Gaps = 47/256 (18%)

Query: 300  SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
            +IA GS H V + + G +++WG  S G+LG G     + P  +  L G  +  +A G  H
Sbjct: 1131 AIAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGLTG--VIAIAAGSLH 1188

Query: 360  TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
            T A+   G ++ WG   ++LG LG  +      P +V G + G  +++I  G +HTAA+ 
Sbjct: 1189 TVALRQDGTVWAWG--FNDLGQLGDGTTTRRLTPAQVQG-LTG--VTTIAAGYFHTAAVR 1243

Query: 420  SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI-----VEVA 474
              G  +T+G   +G LG G  +  + P +V+ L  +  + A     HT  +     V   
Sbjct: 1244 QDGTAWTWGFNLWGQLGDGTFTDRATPVQVQGLTGVSALAAGYA--HTVVVGEDGTVWAW 1301

Query: 475  GKTSGS---NG-------------------LSSKKLFT-----------WGDGAEGQLGH 501
            G  SG+   NG                   L++ +  T           WG    GQ+G 
Sbjct: 1302 GNNSGTQLGNGSSTDRSTPVQVEALTGAFSLAAGRFHTVAMSPDGAGWGWGRNNLGQVGD 1361

Query: 502  GDAEPRVVPLCVKVSD 517
            G    R  P+ V V +
Sbjct: 1362 GTTADRPTPVNVMVQE 1377



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 96/226 (42%), Gaps = 24/226 (10%)

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           HT A+   G ++ +G+   G LG G  +    P +V T         + G++HT A  + 
Sbjct: 84  HTLAVRQDGTVWAWGNNDDGQLGDGTTTRRFSPVQVMT----GATAIAAGIYHTVAASQ- 138

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
                         ++TWG  + GQLG G +  R  P  V+V        VA G + + A
Sbjct: 139 -----------DGTVWTWGRNSSGQLGDGTSIQRFSP--VQVQGLTGVTAVAAGRNHSAA 185

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
           L   G V++ G    GQLG   ST +  P +++G      +  I+        +     V
Sbjct: 186 LGQGGTVWTWGDNLVGQLGDGTSTQRLTPVQVQGLTG---VIAISANDSETVALRQDGTV 242

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + WG  ++GQLG G    + TP  V+ L    V ++  G  F  A+
Sbjct: 243 WAWGNNSSGQLGDGTTTVRFTP--VQVLGLTGVTAIAAGGGFAVAL 286


>gi|158253947|gb|AAI48319.1| HERC2 protein [Homo sapiens]
          Length = 703

 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 158/294 (53%), Gaps = 28/294 (9%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           VF+WG    + L  G + G +I         +P   E+   L+   +A GSK    VT +
Sbjct: 428 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 477

Query: 315 GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
           G++++ GE + G+LG G+ +  V  P+ I AL+   +  VA   G  H  A+T+ G +++
Sbjct: 478 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 537

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG+G  + G LG  S ++   PR +   ++  +I  I CG  H+AA+TS+G+L+T+G G 
Sbjct: 538 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 594

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
           +G LGHGD ++   P+ V+ L   + +  +CG            + + +  L+ + L F+
Sbjct: 595 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 643

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
           WGDG  G+LG G +E   +P  ++  +    C++ CG   ++ALT +G V++ G
Sbjct: 644 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWG 697



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 147/291 (50%), Gaps = 18/291 (6%)

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           T + ++F WG     +LG    + +  P   + L+  N+  VA G     AVT+ G +Y 
Sbjct: 423 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 482

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEG-LQISSICCGPWHTAAITSAGKLFTFGDG 430
            G+  +    LG +S  +  IPR+++      ++  ++  G  H  A+T  GK+F++G+G
Sbjct: 483 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 541

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
             G LGH  R +   PR +E LK  +    +CG  H+AA+             SS +L+T
Sbjct: 542 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 589

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
           WG G  G+LGHGD   ++ P  VKV       +VACG   + T+ALT  G VFS G  D+
Sbjct: 590 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 649

Query: 549 GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           G+LG  GS G   P  IE  +  + +  I CG+     ++    V+TWGKG
Sbjct: 650 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 699



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 119/244 (48%), Gaps = 24/244 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+  GE   NG LG  ++   +    +  AL      S+ V+   ++  G +HA  +T
Sbjct: 478 GKVYACGEAT-NGRLGLGISSGTVPIPRQITAL------SSYVVKKVAVHSGGRHATALT 530

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G++FSWGEG  GKLGH    +   P+LI+AL    I  +ACG  H+ A+T SG+LYTW
Sbjct: 531 VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTW 590

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDG 430
           G G    G LG     +   P+ V   + G ++  + CG     T A+T  G +F++GDG
Sbjct: 591 GLG--EYGRLGHGDNTTQLKPKMVK-VLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG 647

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            FG LG G     ++P+ +E L         CG   + A+ +            S  ++T
Sbjct: 648 DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTK------------SGVVWT 695

Query: 491 WGDG 494
           WG G
Sbjct: 696 WGKG 699



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 138/283 (48%), Gaps = 22/283 (7%)

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           A T+   ++ WG  +++   LG +      +P   S  +  L +  +  G     A+T  
Sbjct: 421 AATIRTKVFVWG--LNDKDQLGGLKGSKIKVP-SFSETLSALNVVQVAGGSKSLFAVTVE 477

Query: 422 GKLFTFGDGTFGALGHGDRSST-SVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTS 478
           GK++  G+ T G LG G  S T  +PR++  L    +K V    G  H  A+  V GK  
Sbjct: 478 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALT-VDGK-- 534

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
                    +F+WG+G +G+LGH        P  ++         +ACG S + ALT++G
Sbjct: 535 ---------VFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 585

Query: 539 QVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSE--VYTW 595
           ++++ G  +YG+LG   +T +  P  ++  + HR I+ +ACGS     ++   E  V++W
Sbjct: 586 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ-VACGSRDAQTLALTDEGLVFSW 644

Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G G  G+LG G +E    P  +E L  + V  + CG+ F+ A+
Sbjct: 645 GDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 687



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 118/249 (47%), Gaps = 18/249 (7%)

Query: 188 VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
           + + T   K Y   E+ +  L    S G      R  TA S  +    AV S  + +   
Sbjct: 471 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 529

Query: 248 DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
             DG   VF WGEG  +G LG            R +   P+++E+      + IACGS H
Sbjct: 530 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 577

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
           +  +T  G++++WG G  G+LGHG       PK++  L G  +  VACG  +  T A+T 
Sbjct: 578 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 637

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            G +++WGDG  + G LG+       IP+ +  ++ G  +  I CG   + A+T +G ++
Sbjct: 638 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 694

Query: 426 TFGDGTFGA 434
           T+G G   A
Sbjct: 695 TWGKGRLKA 703



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           +A T   K+F +G      LG    S   VP   ETL  L              +V+VAG
Sbjct: 420 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 466

Query: 476 KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
            +     ++ + K++  G+   G+LG G +   V +P  +         KVA   G    
Sbjct: 467 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 526

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            ALT  G+VFS G  D G+LG          R+   +K + I DIACGS H A ++S  E
Sbjct: 527 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 586

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           +YTWG G  G+LGHGDN  +  P +V+ L   +V  V CGS     + L
Sbjct: 587 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 635


>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
            protein [Acanthamoeba castellanii str. Neff]
          Length = 1563

 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 161/374 (43%), Gaps = 61/374 (16%)

Query: 300  SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS--YPKLIDALNGSNIHMVACGE 357
            +++CG  H   +T+ G +++WG    G+LGHG ++ V   +PK +       +  V CG 
Sbjct: 879  NVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEVVCGG 938

Query: 358  FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
             HT A T SG +Y WG+G   +G LG      HW+P  +   +  + ++ +  G  HT  
Sbjct: 939  EHTLARTESGSVYGWGNG--RIGQLGLGDRTLHWLPVPIK-TLRKMHVTQLAAGYAHTIV 995

Query: 418  ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
            +  +G++  FG G  G LG G R    VP +++ +  +  V A+CG  HTA + E     
Sbjct: 996  VLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQAMPSI--VQAACGYCHTALLTEAG--- 1050

Query: 478  SGSNGLSSKKLFTWGDGAEGQLGHGD--AEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
                     +++T G    GQLGH D     R+ P  V+  +      +ACG   TIA+T
Sbjct: 1051 ---------EVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIRFIACGSFHTIAIT 1101

Query: 536  ATGQVFSMGSADYGQLGSPGSTGKF-------------PTRIEGNIKHRYIEDIACGSYH 582
                V++     +G +    S G               P+ ++G +  R I  ++CG  H
Sbjct: 1102 DLDNVYT-----WGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKR-ISLVSCGHAH 1155

Query: 583  IAVVSSKSEVYTWG-----------KGANGQLGHGDNENKQTPTLVEALRDKQ------- 624
                +   EVY W            +G+      G  E    P LV A+ D Q       
Sbjct: 1156 SVATTMDGEVYVWSSTGSLQPPLLLRGSGLSTASGTTE---APLLVSAIPDGQDAKSKPV 1212

Query: 625  VKSVVCGSNFTAAI 638
            VK    G  FT  +
Sbjct: 1213 VKHAAAGEEFTLVV 1226



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 122/240 (50%), Gaps = 20/240 (8%)

Query: 404  QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV--PREVETLKELKTVMAS 461
            Q+ ++ CG  H AA+T  G ++T+G    G LGHGD+S      P++V   K        
Sbjct: 876  QVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEVV 935

Query: 462  CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
            CG  HT A  E     SGS       ++ WG+G  GQLG GD     +P+ +K    +  
Sbjct: 936  CGGEHTLARTE-----SGS-------VYGWGNGRIGQLGLGDRTLHWLPVPIKTLRKMHV 983

Query: 522  CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS 580
             ++A G++ TI +  +G+V   G  + GQLG+        PT+++       I   ACG 
Sbjct: 984  TQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQAMPS---IVQAACGY 1040

Query: 581  YHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             H A+++   EVYT G   +GQLGH DN   ++  P +VE L  K+++ + CGS  T AI
Sbjct: 1041 CHTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIRFIACGSFHTIAI 1100



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 166/388 (42%), Gaps = 59/388 (15%)

Query: 253  GDVFIWGEGLGNGLLG-GAVNGVEISSADRRDALLPKVLESTVVLD----AQSIACGSKH 307
            G V+ WG   G+G LG G  +GV            P++    V+       + + CG +H
Sbjct: 894  GHVYTWGRN-GSGELGHGDKSGV------------PQLHPKQVIFFKSKCVKEVVCGGEH 940

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
             +  T+ G ++ WG G  G+LG G       P  I  L   ++  +A G  HT  V  SG
Sbjct: 941  TLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKTLRKMHVTQLAAGYAHTIVVLKSG 1000

Query: 368  DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            ++  +G G   +G LG        +P K+      +Q +   CG  HTA +T AG+++T 
Sbjct: 1001 EVMVFGGG--EVGQLGTGMRKDLLVPTKLQAMPSIVQAA---CGYCHTALLTEAGEVYTC 1055

Query: 428  GDGTFGALGHGD--RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            G    G LGH D  ++    P+ VE L   +    +CG +HT AI ++            
Sbjct: 1056 GSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIRFIACGSFHTIAITDL------------ 1103

Query: 486  KKLFTWG-------DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
              ++TWG       DGA  Q        RV P  VK         V+CGH+ ++A T  G
Sbjct: 1104 DNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKRISLVSCGHAHSVATTMDG 1163

Query: 539  QVFSMGSADYGQ---------LGSPGSTGKFPTRIEG-----NIKHR-YIEDIACGSYHI 583
            +V+   S    Q         L +   T + P  +       + K +  ++  A G    
Sbjct: 1164 EVYVWSSTGSLQPPLLLRGSGLSTASGTTEAPLLVSAIPDGQDAKSKPVVKHAAAGEEFT 1223

Query: 584  AVVSSKSEVYTWGKGANGQLGHGDNENK 611
             VV+    +Y+WG GA GQLG GD  ++
Sbjct: 1224 LVVTENGLLYSWGSGAFGQLGLGDQGDR 1251



 Score = 59.3 bits (142), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 2/84 (2%)

Query: 556 STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN--KQT 613
           S GK      G +  R + +++CG  H A ++    VYTWG+  +G+LGHGD     +  
Sbjct: 860 SGGKLNVPFGGLVSMRQVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLH 919

Query: 614 PTLVEALRDKQVKSVVCGSNFTAA 637
           P  V   + K VK VVCG   T A
Sbjct: 920 PKQVIFFKSKCVKEVVCGGEHTLA 943


>gi|348530942|ref|XP_003452969.1| PREDICTED: hypothetical protein LOC100696645 [Oreochromis
           niloticus]
          Length = 1384

 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 161/348 (46%), Gaps = 47/348 (13%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H+ ++T+ G++  +G  + G+LG  ++     P  + AL    + + ACG  HT
Sbjct: 41  MSCGGEHSAVITENGRLLMFGGNTWGQLGLRIKPSARKPTSVKALKSEKVKLAACGRDHT 100

Query: 361 CAVTLSGDLYTWG---DGIHNLGLLGQ------VSEISHWIPRKVSGQMEGLQISSICCG 411
              T  G +Y+ G   DG   LG   +      +     W P           I  +  G
Sbjct: 101 IVCTFHGSVYSAGSNQDGQLGLGHCDKSTYFHLLRPFCDWAP-----------IKMLSAG 149

Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIV 471
              +AA+T  G+LF +GD + G +  GD    + PREV   + +  +  SCG  H +A V
Sbjct: 150 CNTSAALTEDGRLFMWGDNSVGQIAFGDEGFAAEPREVHVGEAV--IWVSCGYKH-SAFV 206

Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCKVACGH 528
            V G           +L+T+G+ A G+LG      A  RV      V   ++  +V CG 
Sbjct: 207 TVYG-----------RLYTFGESANGRLGLQKEQLANHRVPQQVQGVLGHVT--RVCCGG 253

Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH---RYIEDIACGSYHIAV 585
             T+ LT    V++ G   YGQLG    T  F   +   ++H     +  IACG  H AV
Sbjct: 254 EHTVVLTEKN-VYTFGRGQYGQLGH--GTFLFEVHLPKALQHFCNSKVRHIACGENHTAV 310

Query: 586 VSSKSEVYTWGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCG 631
           V+    +YT+G G +G+LG G+    N+ +PTL        V+SV CG
Sbjct: 311 VTDSGLLYTFGDGRHGKLGLGEENFINQFSPTLCTRFLQYAVQSVSCG 358



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 123/280 (43%), Gaps = 58/280 (20%)

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
           + CG  H+A IT  G+L  FG  T+G LG   + S   P  V+ LK  K  +A+CG  HT
Sbjct: 41  MSCGGEHSAVITENGRLLMFGGNTWGQLGLRIKPSARKPTSVKALKSEKVKLAACGRDHT 100

Query: 468 ------AAIVEVAGKTSGSNGL-----------------------------------SSK 486
                  ++        G  GL                                      
Sbjct: 101 IVCTFHGSVYSAGSNQDGQLGLGHCDKSTYFHLLRPFCDWAPIKMLSAGCNTSAALTEDG 160

Query: 487 KLFTWGDGAEGQLGHGD----AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
           +LF WGD + GQ+  GD    AEPR V +   V        V+CG+  +  +T  G++++
Sbjct: 161 RLFMWGDNSVGQIAFGDEGFAAEPREVHVGEAV------IWVSCGYKHSAFVTVYGRLYT 214

Query: 543 MGSADYGQLG---SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
            G +  G+LG      +  + P +++G + H  +  + CG  H  V++ K+ VYT+G+G 
Sbjct: 215 FGESANGRLGLQKEQLANHRVPQQVQGVLGH--VTRVCCGGEHTVVLTEKN-VYTFGRGQ 271

Query: 600 NGQLGHGDNENK-QTPTLVEALRDKQVKSVVCGSNFTAAI 638
            GQLGHG    +   P  ++   + +V+ + CG N TA +
Sbjct: 272 YGQLGHGTFLFEVHLPKALQHFCNSKVRHIACGENHTAVV 311



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 87/169 (51%), Gaps = 12/169 (7%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G ++ +GE   NG LG       +      +  +P+ ++  V+     + CG +H V++T
Sbjct: 210 GRLYTFGES-ANGRLG-------LQKEQLANHRVPQQVQG-VLGHVTRVCCGGEHTVVLT 260

Query: 313 KQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           ++  ++++G G  G+LGHG    +V  PK +     S +  +ACGE HT  VT SG LYT
Sbjct: 261 EKN-VYTFGRGQYGQLGHGTFLFEVHLPKALQHFCNSKVRHIACGENHTAVVTDSGLLYT 319

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
           +GDG H    LG+ + I+ + P   +  ++   + S+ CG  H   + +
Sbjct: 320 FGDGRHGKLGLGEENFINQFSPTLCTRFLQ-YAVQSVSCGGHHMLVLAT 367



 Score = 46.2 bits (108), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 10/113 (8%)

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
           + +  TG +F+ G   +            P++    +K+ + + ++CG  H AV++    
Sbjct: 7   VDIPETGAIFTFGRTSFA--------NNVPSKFW--LKNDHPKHMSCGGEHSAVITENGR 56

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           +  +G    GQLG     + + PT V+AL+ ++VK   CG + T     H  V
Sbjct: 57  LLMFGGNTWGQLGLRIKPSARKPTSVKALKSEKVKLAACGRDHTIVCTFHGSV 109


>gi|426258035|ref|XP_004022625.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Ovis
           aries]
          Length = 1137

 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 170/349 (48%), Gaps = 47/349 (13%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           S++CG +H  + T   ++F +G  + G+LG G +A V+ P  I AL    +  VACG  H
Sbjct: 65  SLSCGDEHTAITTGNNKLFMFGSNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNH 124

Query: 360 TCAVTLSGDLY-TWGDGIHNLGLLGQVSEIS--HWIPRKVSGQMEGLQISSICCGPWHTA 416
           T  +T  G +Y T G+    LG LG   E S  H I    S      +I  +  G   +A
Sbjct: 125 TLVLTGGGKVYATGGNNEGQLG-LGDTDERSAFHLISFFTSQH----KIKQLSAGSNTSA 179

Query: 417 AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           A+T  G+LF +GD + G +G  + ++  VP +V   K +  +  SCG +H+A +      
Sbjct: 180 ALTEDGELFMWGDNSEGQIGLQNITNMCVPHQVTVGKPISWI--SCGYYHSAFVT----- 232

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGH------GDAEPRVVPLCVKVSDDISFCKVACGHSI 530
           T G       +L+T+G+   G+LG           P++VP    +S+ +   +VACG   
Sbjct: 233 TEG-------ELYTFGEPESGKLGLPPKLLVNHKVPQLVP---GISEKV--IQVACGGGH 280

Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIA 584
           T+ LT    V++ G   +GQLG     G F      P  IE ++K + I  + CG  H A
Sbjct: 281 TVVLTEKA-VYTFGLGQFGQLG----LGTFTFETSEPKVIE-SVKDKKISHVCCGENHTA 334

Query: 585 VVSSKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
           +++    +YT+G G +G+LG G  +  N+  PTL        V  V CG
Sbjct: 335 LITESGLLYTFGDGRHGKLGLGMENFANQFLPTLCSNFLKYIVHLVACG 383



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 142/291 (48%), Gaps = 25/291 (8%)

Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
           ++CG+ HT   T +  L+ +G   +N G LG  S+ +   P  +   ++  ++  + CG 
Sbjct: 66  LSCGDEHTAITTGNNKLFMFGS--NNWGQLGLGSKATVNKPTCIKA-LKPEKVKFVACGR 122

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL-KELKTVMASCGVWHTAAIV 471
            HT  +T  GK++  G    G LG GD    S    +     + K    S G   +AA+ 
Sbjct: 123 NHTLVLTGGGKVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALT 182

Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
           E              +LF WGD +EGQ+G  +     VP  V V   IS+  ++CG+  +
Sbjct: 183 EDG------------ELFMWGDNSEGQIGLQNITNMCVPHQVTVGKPISW--ISCGYYHS 228

Query: 532 IALTATGQVFSMGSADYGQLGSPGS---TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
             +T  G++++ G  + G+LG P       K P  + G I  + I+ +ACG  H  V++ 
Sbjct: 229 AFVTTEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPG-ISEKVIQ-VACGGGHTVVLTE 286

Query: 589 KSEVYTWGKGANGQLGHGD-NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           K+ VYT+G G  GQLG G        P ++E+++DK++  V CG N TA I
Sbjct: 287 KA-VYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKISHVCCGENHTALI 336



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 147/298 (49%), Gaps = 33/298 (11%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN-IHMVACGEFH 359
           +ACG  H +++T  G++++ G  + G+LG G   + S   LI      + I  ++ G   
Sbjct: 118 VACGRNHTLVLTGGGKVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNT 177

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           + A+T  G+L+ WGD  ++ G +G  +  +  +P +V+    G  IS I CG +H+A +T
Sbjct: 178 SAALTEDGELFMWGD--NSEGQIGLQNITNMCVPHQVTV---GKPISWISCGYYHSAFVT 232

Query: 420 SAGKLFTFGDGTFGALGHGDR--SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           + G+L+TFG+   G LG   +   +  VP+ V  + E K +  +CG  HT  + E     
Sbjct: 233 TEGELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISE-KVIQVACGGGHTVVLTE----- 286

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHG-----DAEPRVVPLCVKVSDDISFCKVACGHSITI 532
                   K ++T+G G  GQLG G      +EP+V+   VK   D     V CG + T 
Sbjct: 287 --------KAVYTFGLGQFGQLGLGTFTFETSEPKVIE-SVK---DKKISHVCCGENHTA 334

Query: 533 ALTATGQVFSMGSADYGQ--LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
            +T +G +++ G   +G+  LG      +F   +  N     +  +ACG  H+ V ++
Sbjct: 335 LITESGLLYTFGDGRHGKLGLGMENFANQFLPTLCSNFLKYIVHLVACGGCHMLVFAT 392



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 73/137 (53%), Gaps = 8/137 (5%)

Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV-EADVSYPKLID 343
           L+P + E  +      +ACG  H V++T++  ++++G G  G+LG G    + S PK+I+
Sbjct: 263 LVPGISEKVI-----QVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFTFETSEPKVIE 316

Query: 344 ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
           ++    I  V CGE HT  +T SG LYT+GDG H    LG  +  + ++P   S  ++ +
Sbjct: 317 SVKDKKISHVCCGENHTALITESGLLYTFGDGRHGKLGLGMENFANQFLPTLCSNFLKYI 376

Query: 404 QISSICCGPWHTAAITS 420
            +  + CG  H     +
Sbjct: 377 -VHLVACGGCHMLVFAT 392


>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
          Length = 675

 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 91/286 (31%), Positives = 150/286 (52%), Gaps = 25/286 (8%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGEFH 359
           I CG  H++ ++K G++F+WG+   G+LG G + A +  P+L++ L+G  +  ++ G+ H
Sbjct: 52  ITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAGKAH 111

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           + A+++SG++Y+WG   ++LG LG         P  V   ++  ++  + CG  HTA +T
Sbjct: 112 SMALSMSGNIYSWGR--NDLGQLGLGHTDGEEFPSLVEA-LDSQKVEFLACGGSHTALLT 168

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G++FTFG G  G LGH    +   PR V  L  ++    +CG  HT A V   G    
Sbjct: 169 EDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYVSDLG---- 224

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV--SDDISF-CKVACGHSITIALTA 536
                  K+F++G G EGQLG+G    +++PL +K+  ++D+ F  + +    I IA   
Sbjct: 225 -------KVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEDLKFESRTSEKELIMIAGGN 277

Query: 537 TGQVFSMGSAD-YGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
              +  MG  + Y  L       K PT  EG IK R+I D+    +
Sbjct: 278 QSILLWMGKKNPYVNLRR-----KIPTLNEGTIK-RWIADVGTKQW 317



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 147/338 (43%), Gaps = 37/338 (10%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
           +   S+  G++H ++++  G+ F +               + + +    L   +I  + C
Sbjct: 7   MKIHSVDQGAEHMLILSSDGKPFEYN------------YSIEHARFQCILQEKSIIQITC 54

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR-KVSGQMEGLQISSICCGPWH 414
           G++H+ A++  G+L+ WG  +H  G LG +  +   IP  ++   + G+ +  I  G  H
Sbjct: 55  GDYHSLALSKGGELFAWGQNLH--GQLG-IGRLFASIPTPQLVEHLSGVPLVQISAGKAH 111

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           + A++ +G ++++G    G LG G       P  VE L   K    +CG  HTA + E  
Sbjct: 112 SMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLTE-- 169

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                       ++FT+G G  GQLGH   +  + P  V     I   +VACG   T+A 
Sbjct: 170 ----------DGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLAY 219

Query: 535 TA-TGQVFSMGSADYGQLGSPGSTGK---FPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
            +  G+VFS GS   GQLG+ G+  +    P ++  N   ++ E        I +     
Sbjct: 220 VSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEDLKF-ESRTSEKELIMIAGGNQ 278

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSV 628
            +  W    N  +    N  ++ PTL E    + +  V
Sbjct: 279 SILLWMGKKNPYV----NLRRKIPTLNEGTIKRWIADV 312



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 114/237 (48%), Gaps = 27/237 (11%)

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
           ++I S+  G  H   ++S GK F +              S    R    L+E   +  +C
Sbjct: 7   MKIHSVDQGAEHMLILSSDGKPFEYN------------YSIEHARFQCILQEKSIIQITC 54

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISF 521
           G +H+ A+         S G    +LF WG    GQLG G     +  P  V+    +  
Sbjct: 55  GDYHSLAL---------SKG---GELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPL 102

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
            +++ G + ++AL+ +G ++S G  D GQLG   + G+ FP+ +E  +  + +E +ACG 
Sbjct: 103 VQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEA-LDSQKVEFLACGG 161

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            H A+++   +V+T+G G +GQLGH   +N+  P LV  L   +V  V CG   T A
Sbjct: 162 SHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLA 218



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 104/195 (53%), Gaps = 13/195 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++F WG+ L +G LG       I +        P+++E    +    I+ G  H++ ++
Sbjct: 66  GELFAWGQNL-HGQLGIGRLFASIPT--------PQLVEHLSGVPLVQISAGKAHSMALS 116

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G I+SWG    G+LG G      +P L++AL+   +  +ACG  HT  +T  G ++T+
Sbjct: 117 MSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLTEDGQVFTF 176

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G H  G LG  S  +   PR V+ ++ G++++ + CG  HT A ++  GK+F+FG G 
Sbjct: 177 GAGKH--GQLGHNSTQNELRPRLVT-ELTGIRVTQVACGRRHTLAYVSDLGKVFSFGSGK 233

Query: 432 FGALGHGDRSSTSVP 446
            G LG+G   +  +P
Sbjct: 234 EGQLGNGGTHNQLIP 248



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 68/125 (54%), Gaps = 1/125 (0%)

Query: 515 VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT-RIEGNIKHRYI 573
           +  + S  ++ CG   ++AL+  G++F+ G   +GQLG        PT ++  ++    +
Sbjct: 43  ILQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPL 102

Query: 574 EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSN 633
             I+ G  H   +S    +Y+WG+   GQLG G  + ++ P+LVEAL  ++V+ + CG +
Sbjct: 103 VQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGS 162

Query: 634 FTAAI 638
            TA +
Sbjct: 163 HTALL 167


>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
           CCMP2712]
          Length = 316

 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 159/345 (46%), Gaps = 32/345 (9%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           V+ WG+        G+  G ++SS+       P++L+  +    + +ACG  H+ +V   
Sbjct: 1   VYFWGQA-------GSAVGEQVSSST------PRMLKKAMGRQVRDVACGLVHSAMVMGS 47

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           G++  WGE   G+ G G +    +P  + +L G     V+CG  HT  V+  G +++WG 
Sbjct: 48  GEVLCWGENKYGQCGTGTQEQTEHPTFVGSLFGVACMSVSCGGAHTVVVSEDGRVFSWGL 107

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
           G +  G LG  S  +   P  V   M G  + ++ CG  HT  + + G+L+T G    G 
Sbjct: 108 GAN--GQLGHGSRDNLTTPSVVQ-AMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQ 164

Query: 435 LGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG 494
            G G  S    P+ VE+L+      ASCG  HTA +                ++FT+G G
Sbjct: 165 CGVGSTSDLLSPQCVESLRGEGVQHASCGAGHTAVVT------------GGGEVFTFGSG 212

Query: 495 AEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSP 554
           + GQLGHGD +   +P  V     I    VACG   T+      +VF  G  + GQLG+ 
Sbjct: 213 SCGQLGHGDCQDLSMPRRVGALVGIVMSMVACGEEYTVCAAFDHRVFGFGLNNVGQLGAS 272

Query: 555 GSTGKF---PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
            ++  +   P ++E  +K   +E   C    +  ++ +  +  WG
Sbjct: 273 STSHPYLSEPRQME-FLKEEEVELCKCNQSEVIALTRRGALRAWG 316



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 155/330 (46%), Gaps = 38/330 (11%)

Query: 223 SSTADSFRISLSSAVSSSSQGSCHEDF-DGLGDVFIWGEGLGNGLLGGAVNGVEISSADR 281
           SST    + ++   V   + G  H     G G+V  WGE              +  +  +
Sbjct: 17  SSTPRMLKKAMGRQVRDVACGLVHSAMVMGSGEVLCWGENKYG----------QCGTGTQ 66

Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL 341
                P  + S   +   S++CG  H V+V++ G++FSWG G+ G+LGHG   +++ P +
Sbjct: 67  EQTEHPTFVGSLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTPSV 126

Query: 342 IDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV-SGQM 400
           + A+ G ++  V CG  HT  V   G+LYT G   +    +G  S++    P+ V S + 
Sbjct: 127 VQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTSDLLS--PQCVESLRG 184

Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
           EG+Q +S  CG  HTA +T  G++FTFG G+ G LGHGD    S+PR V  L  +   M 
Sbjct: 185 EGVQHAS--CGAGHTAVVTGGGEVFTFGSGSCGQLGHGDCQDLSMPRRVGALVGIVMSMV 242

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD------AEPRVVPLCVK 514
           +CG  +T                   ++F +G    GQLG         +EPR +    +
Sbjct: 243 ACGEEYTVCAA------------FDHRVFGFGLNNVGQLGASSTSHPYLSEPRQMEFLKE 290

Query: 515 VSDDISFCKVACGHSITIALTATGQVFSMG 544
             +++  CK  C  S  IALT  G + + G
Sbjct: 291 --EEVELCK--CNQSEVIALTRRGALRAWG 316



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 130/269 (48%), Gaps = 22/269 (8%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +Y WG     +G      ++S   PR +   M G Q+  + CG  H+A +  +G++  +G
Sbjct: 1   VYFWGQAGSAVG-----EQVSSSTPRMLKKAM-GRQVRDVACGLVHSAMVMGSGEVLCWG 54

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           +  +G  G G +  T  P  V +L  +  +  SCG  HT  + E              ++
Sbjct: 55  ENKYGQCGTGTQEQTEHPTFVGSLFGVACMSVSCGGAHTVVVSE------------DGRV 102

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           F+WG GA GQLGHG  +    P  V+         V CG   T+ + A G++++ G    
Sbjct: 103 FSWGLGANGQLGHGSRDNLTTPSVVQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKN 162

Query: 549 GQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
           GQ G  GST     P  +E +++   ++  +CG+ H AVV+   EV+T+G G+ GQLGHG
Sbjct: 163 GQCG-VGSTSDLLSPQCVE-SLRGEGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGHG 220

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           D ++   P  V AL    +  V CG  +T
Sbjct: 221 DCQDLSMPRRVGALVGIVMSMVACGEEYT 249



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 148/328 (45%), Gaps = 22/328 (6%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           ++ WG+ +G  +G  V +  S P+++    G  +  VACG  H+  V  SG++  WG+  
Sbjct: 1   VYFWGQ-AGSAVGEQVSS--STPRMLKKAMGRQVRDVACGLVHSAMVMGSGEVLCWGENK 57

Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
           +     G   +  H  P  V G + G+   S+ CG  HT  ++  G++F++G G  G LG
Sbjct: 58  YGQCGTGTQEQTEH--PTFV-GSLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLG 114

Query: 437 HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
           HG R + + P  V+ ++    +  +CGV HT  +            L+  +L+T G    
Sbjct: 115 HGSRDNLTTPSVVQAMRGRDVLAVTCGVGHTVIV------------LAGGELYTCGWNKN 162

Query: 497 GQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGS 556
           GQ G G     + P CV+          +CG   T  +T  G+VF+ GS   GQLG    
Sbjct: 163 GQCGVGSTSDLLSPQCVESLRGEGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGHGDC 222

Query: 557 TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK--QTP 614
                 R  G +    +  +ACG  +    +    V+ +G    GQLG     +     P
Sbjct: 223 QDLSMPRRVGALVGIVMSMVACGEEYTVCAAFDHRVFGFGLNNVGQLGASSTSHPYLSEP 282

Query: 615 TLVEALRDKQVKSVVCGSNFTAAICLHK 642
             +E L++++V+  +C  N +  I L +
Sbjct: 283 RQMEFLKEEEVE--LCKCNQSEVIALTR 308


>gi|405968936|gb|EKC33959.1| Serine/threonine-protein kinase Nek8 [Crassostrea gigas]
          Length = 1493

 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 138/304 (45%), Gaps = 35/304 (11%)

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
           I   A GE H   VT    +Y+WG G  + G LG  +  S   P  V   + G  IS  C
Sbjct: 552 IRHAAVGEDHVIVVTTEKQVYSWGSG--DKGQLGHGNMESKMKPELVQS-LNGKSISRAC 608

Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA 469
           CG   +   +  G + T GDGT G LGHGD  S   PR +ETL  L  +  SCG  H   
Sbjct: 609 CGEGFSIFASDNGIVLTCGDGTSGCLGHGDTLSCYRPRLIETLLSLDVIAISCGSKHVVV 668

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHS 529
           +             S  ++ TWG GA+G+LG G  +    P  +++ + +    V CG  
Sbjct: 669 VG------------SEGEVLTWGCGADGRLGLGTEDNHCQPQELRIEEPVVIRDVFCGVD 716

Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTG-----------------KFPTRIEGNIKHRY 572
            T+ LT  G V++ GS    +LG     G                   PT +    +HR 
Sbjct: 717 GTMFLTDVGSVYACGSNSDNKLGLNNRQGFIMAMKNIFTKTEVEGSNVPTPVRALARHRV 776

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
           +  I+ G+ H AV+     +YT+GK + GQLG GD +  + P  V+A+ +     V CG+
Sbjct: 777 L-GISMGACHTAVIVEPGHIYTFGKNSEGQLGIGDTKPSRAPVEVKAMLES--VRVQCGN 833

Query: 633 NFTA 636
           ++T 
Sbjct: 834 HYTV 837



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 142/303 (46%), Gaps = 17/303 (5%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G  H ++VT + Q++SWG G  G+LGHG       P+L+ +LNG +I    CGE  + 
Sbjct: 556 AVGEDHVIVVTTEKQVYSWGSGDKGQLGHGNMESKMKPELVQSLNGKSISRACCGEGFSI 615

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
             + +G + T GDG    G LG    +S + PR +   +  L + +I CG  H   + S 
Sbjct: 616 FASDNGIVLTCGDGTS--GCLGHGDTLSCYRPRLIETLL-SLDVIAISCGSKHVVVVGSE 672

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS-GS 480
           G++ T+G G  G LG G   +   P+E+   + +      CGV  T  + +V    + GS
Sbjct: 673 GEVLTWGCGADGRLGLGTEDNHCQPQELRIEEPVVIRDVFCGVDGTMFLTDVGSVYACGS 732

Query: 481 N-----GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
           N     GL++++ F      +      + E   VP  V+         ++ G   T  + 
Sbjct: 733 NSDNKLGLNNRQGFIM--AMKNIFTKTEVEGSNVPTPVRALARHRVLGISMGACHTAVIV 790

Query: 536 ATGQVFSMGSADYGQLGSPGST--GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
             G +++ G    GQLG  G T   + P  ++  ++   ++   CG+++    ++ +E+Y
Sbjct: 791 EPGHIYTFGKNSEGQLGI-GDTKPSRAPVEVKAMLESVRVQ---CGNHYTVCSTTSNELY 846

Query: 594 TWG 596
            WG
Sbjct: 847 YWG 849



 Score = 83.2 bits (204), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 27/219 (12%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+++E+ + LD  +I+CGSKH V+V  +G++ +WG G+ G+LG G E +   P+ +    
Sbjct: 645 PRLIETLLSLDVIAISCGSKHVVVVGSEGEVLTWGCGADGRLGLGTEDNHCQPQELRIEE 704

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQI 405
              I  V CG   T  +T  G +Y  G    N LGL  +   I          ++EG  +
Sbjct: 705 PVVIRDVFCGVDGTMFLTDVGSVYACGSNSDNKLGLNNRQGFIMAMKNIFTKTEVEGSNV 764

Query: 406 SS------------ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
            +            I  G  HTA I   G ++TFG  + G LG GD   +  P EV+ + 
Sbjct: 765 PTPVRALARHRVLGISMGACHTAVIVEPGHIYTFGKNSEGQLGIGDTKPSRAPVEVKAM- 823

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            L++V   CG  +T                +S +L+ WG
Sbjct: 824 -LESVRVQCGNHYTVC------------STTSNELYYWG 849



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 52/120 (43%)

Query: 513 VKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY 572
           +++   I     A G    I +T   QV+S GS D GQLG      K    +  ++  + 
Sbjct: 544 IELPPKIKIRHAAVGEDHVIVVTTEKQVYSWGSGDKGQLGHGNMESKMKPELVQSLNGKS 603

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
           I    CG       S    V T G G +G LGHGD  +   P L+E L    V ++ CGS
Sbjct: 604 ISRACCGEGFSIFASDNGIVLTCGDGTSGCLGHGDTLSCYRPRLIETLLSLDVIAISCGS 663


>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Metaseiulus occidentalis]
          Length = 1152

 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 139/280 (49%), Gaps = 21/280 (7%)

Query: 370 YTWGDGIHNLGLLGQVSEISHWI--PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           +T G G  N G LG      H +  PR +  Q+EG+++  I  G  HT  +TS G++ + 
Sbjct: 17  WTLGFGNTNSGELGLGGIEDHIVRVPRSIP-QLEGIRVRQIATGAHHTLVLTSHGRVLSC 75

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           G      LG     ST+ P  V  L+ L+ V   CG  H+ A+ E              +
Sbjct: 76  GSNDHDQLGQ--EVSTTKPEPVTALQCLRIVQVCCGQQHSMALTEAG------------Q 121

Query: 488 LFTWGDGAEGQLGHGDA-EPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           ++ WG  ++GQLG+G+  E R+ P  VK     +  ++ACG +  +AL   G +++ G  
Sbjct: 122 VYMWGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDN 181

Query: 547 DYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
             GQLG  + G   + P  +  N+    +  IACG+ H  V+S    ++ WG    GQLG
Sbjct: 182 GNGQLGIGTVGEPQRVPVEVT-NLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLG 240

Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
             DN+++  PTL++ LR + VK +  G   +AA+  H GV
Sbjct: 241 LSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAALTAHGGV 280



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 167/363 (46%), Gaps = 63/363 (17%)

Query: 314 QGQIFSWGEGSGGKLGHGVEAD--VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           Q     +G  + G+LG G   D  V  P+ I  L G  +  +A G  HT  +T  G + +
Sbjct: 15  QNWTLGFGNTNSGELGLGGIEDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLS 74

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            G   H+   LGQ  E+S   P  V+  ++ L+I  +CCG  H+ A+T AG+++ +G  +
Sbjct: 75  CGSNDHDQ--LGQ--EVSTTKPEPVTA-LQCLRIVQVCCGQQHSMALTEAGQVYMWGSNS 129

Query: 432 FGALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            G LG+G+ + S   PR V+TL     V  +CG  H  A+            L++  L+ 
Sbjct: 130 KGQLGNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLAL------------LNNGALYA 177

Query: 491 WGDGAEGQLGHGDA-EPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
           WGD   GQLG G   EP+ VP+ V     +   ++ACG + ++ L+ +G +F  GS  +G
Sbjct: 178 WGDNGNGQLGIGTVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFG 237

Query: 550 QLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG------------ 596
           QLG S      FPT ++  ++ ++++ IA G  H A +++   V+T+G            
Sbjct: 238 QLGLSDNKDRAFPTLLK-TLRQQHVKFIAAGGAHSAALTAHGGVFTFGWSFYESHEVRIS 296

Query: 597 ----------------------------KGANGQLGHGDNENKQTPTLVEALRDKQVKSV 628
                                        G+ GQLGHG   ++ TP  ++ L    +  +
Sbjct: 297 LRGTESNPQSALARKLFSLIEREFCRHSYGSYGQLGHGSKNDQLTPMKIQELMGTTITQI 356

Query: 629 VCG 631
             G
Sbjct: 357 ALG 359



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 151/313 (48%), Gaps = 36/313 (11%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGH--GVEADVSYPKLIDA 344
           P+ + +   L    + CG +H++ +T+ GQ++ WG  S G+LG+  G E+ +S P+ +  
Sbjct: 92  PEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRLS-PRFVKT 150

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGD-GIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
           L    +  +ACG  H  A+  +G LY WGD G   LG +G V E    +P +V+  + GL
Sbjct: 151 LAPFTVVQIACGSNHCLALLNNGALYAWGDNGNGQLG-IGTVGE-PQRVPVEVTNLL-GL 207

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
            +S I CG  H+  ++ +G +F +G   FG LG  D    + P  ++TL++      + G
Sbjct: 208 PLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAG 267

Query: 464 VWHTAAI--------------------VEVAGKTSGSNGLSSKKLFTWGD--------GA 495
             H+AA+                    + + G  S      ++KLF+  +        G+
Sbjct: 268 GAHSAALTAHGGVFTFGWSFYESHEVRISLRGTESNPQSALARKLFSLIEREFCRHSYGS 327

Query: 496 EGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT-GQVFSMGSADYGQLGSP 554
            GQLGHG    ++ P+ ++     +  ++A G   T+    T G+VF+ G    GQLGS 
Sbjct: 328 YGQLGHGSKNDQLTPMKIQELMGTTITQIALGRCHTVCYAPTVGKVFTFGLGGNGQLGSS 387

Query: 555 GSTGKFPTRIEGN 567
            S    PT + GN
Sbjct: 388 VSMVSTPTPLAGN 400



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 45/253 (17%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G ++ WG+  GNG LG    G            +P  + + + L    IACG+ H+++++
Sbjct: 173 GALYAWGDN-GNGQLGIGTVG--------EPQRVPVEVTNLLGLPLSQIACGANHSMVLS 223

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K G IF WG    G+LG     D ++P L+  L   ++  +A G  H+ A+T  G ++T+
Sbjct: 224 KSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTF 283

Query: 373 GDGIHN-----LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           G   +      + L G  S     + RK+   +E       C   +              
Sbjct: 284 GWSFYESHEVRISLRGTESNPQSALARKLFSLIE----REFCRHSY-------------- 325

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
             G++G LGHG ++    P +++ L        + G  HT       G           K
Sbjct: 326 --GSYGQLGHGSKNDQLTPMKIQELMGTTITQIALGRCHTVCYAPTVG-----------K 372

Query: 488 LFTWGDGAEGQLG 500
           +FT+G G  GQLG
Sbjct: 373 VFTFGLGGNGQLG 385


>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
          Length = 1039

 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 149/310 (48%), Gaps = 21/310 (6%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGE 357
           Q I+ G  H + ++  G +++ G    G+LG     AD + P L+D   G  +  +ACG 
Sbjct: 38  QQISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGL 97

Query: 358 FHTCAVTLSGDLYTWG-DGIHNLGL-LGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
            H+ A+   G  ++WG D +  LG  LG  ++    I + ++ +     +  + CG +HT
Sbjct: 98  QHSMALDEWGQPFSWGSDSMGQLGSNLGSHAQDKPKIIKTLATK----NVIQVACGSYHT 153

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSST-SVPREVETLKELKTVMASCGVWHTAAIVEVA 474
             +T+ G L+ +G  ++G  G G+RS+  + P+ + ++  +   + +CG  HT A+ +  
Sbjct: 154 VVLTNNGDLYAWGANSYGQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQ-- 211

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                     S  +F WG  + GQLG  D E R  P  +K   ++  C ++CG   T  L
Sbjct: 212 ----------SGAVFGWGKNSHGQLGLQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFL 261

Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
           T  G VF+ G+ +YGQ G   +  +   R    +    +  +ACG  H+ +      +  
Sbjct: 262 TLDGGVFTCGAGEYGQTGHGNTKDELVPRKVMELMGSTVTQVACGRRHM-LCRVGERILA 320

Query: 595 WGKGANGQLG 604
            G GA GQLG
Sbjct: 321 CGYGARGQLG 330



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 138/283 (48%), Gaps = 19/283 (6%)

Query: 273 GVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV 332
           G + +SAD    +L    +   +    +IACG +H++ + + GQ FSWG  S G+LG  +
Sbjct: 68  GRQTNSADGTSPVLVDTFKGCTL---STIACGLQHSMALDEWGQPFSWGSDSMGQLGSNL 124

Query: 333 EADVS-YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHW 391
            +     PK+I  L   N+  VACG +HT  +T +GDLY WG   +    LG  S     
Sbjct: 125 GSHAQDKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRSN-KET 183

Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
            P+ +S  + G+ I+ I CG  HT A++ +G +F +G  + G LG  DR S   P  ++T
Sbjct: 184 TPQALSSIL-GIPIALIACGSNHTFALSQSGAVFGWGKNSHGQLGLQDRESRCYPTHLKT 242

Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPL 511
           L+ +K    SCG   TA +    G            +FT G G  GQ GHG+ +  +VP 
Sbjct: 243 LRNVKVCHISCGEDFTAFLTLDGG------------VFTCGAGEYGQTGHGNTKDELVPR 290

Query: 512 CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSP 554
            V      +  +VACG    +      ++ + G    GQLG P
Sbjct: 291 KVMELMGSTVTQVACGRRHMLCRVGE-RILACGYGARGQLGCP 332



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 150/321 (46%), Gaps = 21/321 (6%)

Query: 317 IFSWGEGSGGKLGHGVEADVSY---PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           +F WG  +  +L      ++     P L      S+I  ++ GEFHT  ++ +G LYT G
Sbjct: 1   MFCWGNATHHELCIECPGNLDLVIKPTLSKWKESSHIQQISAGEFHTLYLSNNGHLYTCG 60

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
              + +G LG+ +  +      +    +G  +S+I CG  H+ A+   G+ F++G  + G
Sbjct: 61  S--NEVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMG 118

Query: 434 ALGHGDRS-STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            LG    S +   P+ ++TL     +  +CG +HT  +         +NG     L+ WG
Sbjct: 119 QLGSNLGSHAQDKPKIIKTLATKNVIQVACGSYHTVVLT--------NNG----DLYAWG 166

Query: 493 DGAEGQLGHGD-AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
             + GQ G G+ +     P  +     I    +ACG + T AL+ +G VF  G   +GQL
Sbjct: 167 ANSYGQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQSGAVFGWGKNSHGQL 226

Query: 552 GSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           G      + +PT ++  +++  +  I+CG    A ++    V+T G G  GQ GHG+ ++
Sbjct: 227 GLQDRESRCYPTHLK-TLRNVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNTKD 285

Query: 611 KQTPTLVEALRDKQVKSVVCG 631
           +  P  V  L    V  V CG
Sbjct: 286 ELVPRKVMELMGSTVTQVACG 306



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 133/283 (46%), Gaps = 23/283 (8%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           ++ WG+  H+   +     +   I   +S   E   I  I  G +HT  +++ G L+T G
Sbjct: 1   MFCWGNATHHELCIECPGNLDLVIKPTLSKWKESSHIQQISAGEFHTLYLSNNGHLYTCG 60

Query: 429 DGTFGALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
               G LG    S+    P  V+T K       +CG+ H+ A+ E              +
Sbjct: 61  SNEVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDEWG------------Q 108

Query: 488 LFTWGDGAEGQLG-----HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
            F+WG  + GQLG     H   +P+++    K     +  +VACG   T+ LT  G +++
Sbjct: 109 PFSWGSDSMGQLGSNLGSHAQDKPKII----KTLATKNVIQVACGSYHTVVLTNNGDLYA 164

Query: 543 MGSADYGQLGSPGSTGKFPT-RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
            G+  YGQ G    + K  T +   +I    I  IACGS H   +S    V+ WGK ++G
Sbjct: 165 WGANSYGQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALSQSGAVFGWGKNSHG 224

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           QLG  D E++  PT ++ LR+ +V  + CG +FTA + L  GV
Sbjct: 225 QLGLQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFLTLDGGV 267



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 129/286 (45%), Gaps = 28/286 (9%)

Query: 226 ADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDAL 285
            D+F+    S ++   Q S     D  G  F WG     G LG  +      + D+    
Sbjct: 82  VDTFKGCTLSTIACGLQHSM--ALDEWGQPFSWGSD-SMGQLGSNLGS---HAQDK---- 131

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDA 344
            PK++++    +   +ACGS H V++T  G +++WG  S G+ G G  ++  + P+ + +
Sbjct: 132 -PKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRSNKETTPQALSS 190

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           + G  I ++ACG  HT A++ SG ++ WG   H  G LG     S   P  +   +  ++
Sbjct: 191 ILGIPIALIACGSNHTFALSQSGAVFGWGKNSH--GQLGLQDRESRCYPTHLK-TLRNVK 247

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +  I CG   TA +T  G +FT G G +G  GHG+     VPR+V  L        +CG 
Sbjct: 248 VCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHGNTKDELVPRKVMELMGSTVTQVACGR 307

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
            H    V              +++   G GA GQLG       +VP
Sbjct: 308 RHMLCRV-------------GERILACGYGARGQLGCPHMAFALVP 340



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 84/198 (42%), Gaps = 15/198 (7%)

Query: 253 GDVFIWG-EGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           GD++ WG    G   LG   N              P+ L S + +    IACGS H   +
Sbjct: 160 GDLYAWGANSYGQCGLGNRSN----------KETTPQALSSILGIPIALIACGSNHTFAL 209

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           ++ G +F WG+ S G+LG        YP  +  L    +  ++CGE  T  +TL G ++T
Sbjct: 210 SQSGAVFGWGKNSHGQLGLQDRESRCYPTHLKTLRNVKVCHISCGEDFTAFLTLDGGVFT 269

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
            G G    G  G  +     +PRKV  ++ G  ++ + CG  H        ++   G G 
Sbjct: 270 CGAG--EYGQTGHGNTKDELVPRKVM-ELMGSTVTQVACGRRHMLC-RVGERILACGYGA 325

Query: 432 FGALGHGDRSSTSVPREV 449
            G LG    +   VP  V
Sbjct: 326 RGQLGCPHMAFALVPTPV 343


>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
          Length = 709

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 167/373 (44%), Gaps = 41/373 (10%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVE 333
           E+ +    + L+P+ +     L    ++ G KH+ LVT+ G+++  G     KLG  G+ 
Sbjct: 96  ELGTGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGSNLHDKLGLEGIT 155

Query: 334 ADVSYP-KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHW 391
                  K ++ L    I  VACG++HT A++  G +Y WG  +HN  G   Q  + +  
Sbjct: 156 TGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQVYVWGGSLHNKRGDRSQERKDNAK 215

Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
               +     G +I  I CG +H+ A+   G L+++G G  G  GHG       P+ ++ 
Sbjct: 216 YKPVLLQSFAGKKIKQIDCGDFHSLALDDNGTLYSWGVGEKGECGHGKFEDQETPQRIKF 275

Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPL 511
                      G  HT AI             +  +++ WGDG  GQ G G+ E   +P 
Sbjct: 276 FDGKIITQIEAGNHHTLAIT------------ADNQVYAWGDGRYGQCGFGEFENTAIPQ 323

Query: 512 CVKVS---------DD------ISFCK-------VACGHSITIALTATGQVFSMGSADYG 549
            V            DD      + F K       +A G   T+ LT++GQ+FS G    G
Sbjct: 324 LVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQIFSFGYNQQG 383

Query: 550 QLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
           QLG   +   +  P  +EG + H+ ++ +A G  H   +++K++VY  G    GQ G  D
Sbjct: 384 QLGH-NTVDNYCRPKLVEGMLNHKTVQ-VAAGRNHSLCLTNKNDVYACGNNQYGQCGLPD 441

Query: 608 NENKQTPTLVEAL 620
            E ++T + V +L
Sbjct: 442 REMRKTFSHVLSL 454



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 167/356 (46%), Gaps = 53/356 (14%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           ++S+G+ + G+LG G   +V  P+ +  L    +  ++ G  H+  VT  G L+  G  +
Sbjct: 86  VWSFGQNTKGELGTGHYNEVLMPERVRGLPKLKVIFLSSGGKHSGLVTEDGKLWMCGSNL 145

Query: 377 HN-LGLLGQVS-EISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
           H+ LGL G  +     + P ++  Q   + I  + CG +HT A++  G+++ +G    G+
Sbjct: 146 HDKLGLEGITTGSKKTFKPVELLTQ---IFIKQVACGDYHTLALSKEGQVYVWG----GS 198

Query: 435 LGH--GDRS------STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
           L +  GDRS      +   P  +++    K     CG +H+ A+ +        NG    
Sbjct: 199 LHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLALDD--------NG---- 246

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
            L++WG G +G+ GHG  E +  P  +K  D     ++  G+  T+A+TA  QV++ G  
Sbjct: 247 TLYSWGVGEKGECGHGKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVYAWGDG 306

Query: 547 DYGQLG-------------SPGSTGKFPTRIEGNIKHRYIE---------DIACGSYHIA 584
            YGQ G             +  S G   + ++ +++   +E          IA G  H  
Sbjct: 307 RYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTL 366

Query: 585 VVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           V++S  +++++G    GQLGH   +N   P LVE + + +   V  G N   ++CL
Sbjct: 367 VLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAGRN--HSLCL 420



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 116/278 (41%), Gaps = 45/278 (16%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRD--ALLPKVLESTVVLDAQSIACGSKHAVL 310
           G V++WG        G   N     S +R+D     P +L+S      + I CG  H++ 
Sbjct: 190 GQVYVWG--------GSLHNKRGDRSQERKDNAKYKPVLLQSFAGKKIKQIDCGDFHSLA 241

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           +   G ++SWG G  G+ GHG   D   P+ I   +G  I  +  G  HT A+T    +Y
Sbjct: 242 LDDNGTLYSWGVGEKGECGHGKFEDQETPQRIKFFDGKIITQIEAGNHHTLAITADNQVY 301

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKV--------------SGQMEGLQ-------ISSIC 409
            WGDG +     G+    +  IP+ V              S Q E L+       I  I 
Sbjct: 302 AWGDGRYGQCGFGEFENTA--IPQLVNFPSQGNNTSYLDDSVQQEILEFFKDPPKIKQIA 359

Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA 469
            G  HT  +TS+G++F+FG    G LGH    +   P+ VE +   KTV  + G  H+  
Sbjct: 360 AGEMHTLVLTSSGQIFSFGYNQQGQLGHNTVDNYCRPKLVEGMLNHKTVQVAAGRNHSLC 419

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR 507
           +             +   ++  G+   GQ G  D E R
Sbjct: 420 LT------------NKNDVYACGNNQYGQCGLPDREMR 445


>gi|256077780|ref|XP_002575178.1| ubiquitin ligase [Schistosoma mansoni]
 gi|360043621|emb|CCD81167.1| putative hect E3 ubiquitin ligase [Schistosoma mansoni]
          Length = 1175

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 172/392 (43%), Gaps = 74/392 (18%)

Query: 278 SADRRDA---LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           + D+ DA   L+PK L+   +     I CG  H V +T  G+++S G     +LGHG ++
Sbjct: 21  TLDKNDAYQILIPKALDVRNLPTLIQITCGYTHTVFLTIDGEVYSCGCNEFQQLGHG-QS 79

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
                K++ AL    I  VACG +H  A+T +G L+TWG   ++ G LG+  + +     
Sbjct: 80  GGQLAKVV-ALEHYRIISVACGAYHNAAITYNGLLFTWG--CNSNGQLGREGDDTG---V 133

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS--STSVPREVETL 452
           K+   +   ++  +  G  HT  +T   ++F FG    G LG G  S  S S+P+++  L
Sbjct: 134 KLVRALSDHKVVQVSLGVEHTLVLTDTARVFAFGSNLKGQLGLGYSSEQSVSIPQQILCL 193

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG--HGDAEPR--- 507
             L       G WH+  +       SGS       L+ WG    GQLG  +  + P    
Sbjct: 194 SGLPVRRIVAGGWHSFVLT-----VSGS-------LYAWGSNNYGQLGLSYFGSSPNDHQ 241

Query: 508 -----------------------------------VVPLCVKVSDDISFCKVACGHSITI 532
                                               +P  VK         +ACG + T+
Sbjct: 242 NELTLKCGSVGSTSVDDEQSKNRPFSPLDTSLSNVSIPTFVKTLRGCEVVYLACGETHTV 301

Query: 533 ALTATGQVFSMGSADYGQLGSPGST-----GKFPTRIEGNIKHRYIEDIACGSYH-IAVV 586
           ALT  G VF+ G+  YGQLG   ST      +  T   GN+    +  IACG +H +A+V
Sbjct: 302 ALTRDGGVFTFGAGRYGQLGHNESTIGISVPRKITEFMGNV----VTQIACGRFHTLALV 357

Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
                ++ +G+G N QLG GD +N+  P  V+
Sbjct: 358 PKTGRLFAFGQGTNAQLGMGDTKNRLLPCPVK 389



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 135/309 (43%), Gaps = 77/309 (24%)

Query: 253 GDVFIWGEGLGNGLLG--GAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
           G +F WG    NG LG  G   GV++  A         + +  VV     ++ G +H ++
Sbjct: 111 GLLFTWGCN-SNGQLGREGDDTGVKLVRA---------LSDHKVV----QVSLGVEHTLV 156

Query: 311 VTKQGQIFSWGEGSGGKLGHGV--EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           +T   ++F++G    G+LG G   E  VS P+ I  L+G  +  +  G +H+  +T+SG 
Sbjct: 157 LTDTARVFAFGSNLKGQLGLGYSSEQSVSIPQQILCLSGLPVRRIVAGGWHSFVLTVSGS 216

Query: 369 LYTWGDGIHNLGLLG------------------------------------------QVS 386
           LY WG   +N G LG                                           +S
Sbjct: 217 LYAWGS--NNYGQLGLSYFGSSPNDHQNELTLKCGSVGSTSVDDEQSKNRPFSPLDTSLS 274

Query: 387 EISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS-STSV 445
            +S  IP  V   + G ++  + CG  HT A+T  G +FTFG G +G LGH + +   SV
Sbjct: 275 NVS--IPTFVK-TLRGCEVVYLACGETHTVALTRDGGVFTFGAGRYGQLGHNESTIGISV 331

Query: 446 PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE 505
           PR++           +CG +HT A+V   G           +LF +G G   QLG GD +
Sbjct: 332 PRKITEFMGNVVTQIACGRFHTLALVPKTG-----------RLFAFGQGTNAQLGMGDTK 380

Query: 506 PRVVPLCVK 514
            R++P  VK
Sbjct: 381 NRLLPCPVK 389



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 145/343 (42%), Gaps = 55/343 (16%)

Query: 316 QIFSWGEGSGGKL--GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           ++F+WG    G+L         +  PK +D  N   +  + CG  HT  +T+ G++Y+ G
Sbjct: 8   ELFAWGSCEEGQLTLDKNDAYQILIPKALDVRNLPTLIQITCGYTHTVFLTIDGEVYSCG 67

Query: 374 -DGIHNLG------LLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            +    LG       L +V  + H+            +I S+ CG +H AAIT  G LFT
Sbjct: 68  CNEFQQLGHGQSGGQLAKVVALEHY------------RIISVACGAYHNAAITYNGLLFT 115

Query: 427 FGDGTFGALG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
           +G  + G LG  GD +   +   V  L + K V  S GV HT  + + A           
Sbjct: 116 WGCNSNGQLGREGDDTGVKL---VRALSDHKVVQVSLGVEHTLVLTDTA----------- 161

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVV--PLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
            ++F +G   +GQLG G +  + V  P  +     +   ++  G   +  LT +G +++ 
Sbjct: 162 -RVFAFGSNLKGQLGLGYSSEQSVSIPQQILCLSGLPVRRIVAGGWHSFVLTVSGSLYAW 220

Query: 544 GSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           GS +YGQLG     G  P        H+    + CGS  +   S   E     +  N   
Sbjct: 221 GSNNYGQLGL-SYFGSSPN------DHQNELTLKCGS--VGSTSVDDE-----QSKNRPF 266

Query: 604 GHGDNE--NKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
              D    N   PT V+ LR  +V  + CG   T A+    GV
Sbjct: 267 SPLDTSLSNVSIPTFVKTLRGCEVVYLACGETHTVALTRDGGV 309



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 86/158 (54%), Gaps = 8/158 (5%)

Query: 484 SSKKLFTWGDGAEGQL--GHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
           ++++LF WG   EGQL     DA   ++P  + V +  +  ++ CG++ T+ LT  G+V+
Sbjct: 5   ATEELFAWGSCEEGQLTLDKNDAYQILIPKALDVRNLPTLIQITCGYTHTVFLTIDGEVY 64

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           S G  ++ QLG   S G+    +   ++H  I  +ACG+YH A ++    ++TWG  +NG
Sbjct: 65  SCGCNEFQQLGHGQSGGQLAKVVA--LEHYRIISVACGAYHNAAITYNGLLFTWGCNSNG 122

Query: 602 QLG-HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           QLG  GD+   +   LV AL D +V  V  G   T  +
Sbjct: 123 QLGREGDDTGVK---LVRALSDHKVVQVSLGVEHTLVL 157


>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Nomascus leucogenys]
          Length = 984

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 168/347 (48%), Gaps = 35/347 (10%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDA 344
           LP+ +++   L+   ++CG +H++ V  +G++F+WG GS G+LG G   ++S+ PK I  
Sbjct: 65  LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITT 124

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGL 403
           LNG  I  V+CG +H+ A++    +++WG   H  G LG   E  S   P++V   +EG+
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQASPQRVRS-LEGI 181

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS---STSVPREVETLKELKTVMA 460
            ++ +  G  H+ A++  G  F +G  + G L    R+    ++ P  V  LK L  V  
Sbjct: 182 PLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYI 241

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
           SCG  HTA + +              K+FT+GD   GQLG+     +  P  V++ D + 
Sbjct: 242 SCGAEHTAVLTQ------------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVEIIDGL- 288

Query: 521 FCKVACGHSITIALT-ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
             +V CG   T+A    TGQV S G         P  TGK PT  E   ++    DI+C 
Sbjct: 289 VSQVDCGSYHTLAYVHTTGQVVSFGHG-------PSDTGK-PTHPEALTENF---DISCL 337

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP--TLVEALRDKQ 624
                +V  + +    G  AN    H D  + + P  TL E  R  Q
Sbjct: 338 ISAEDLVGVQVKHIFAGTYANFVTTHQDTSSTRAPGKTLPEISRISQ 384



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 171/348 (49%), Gaps = 30/348 (8%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G +H++L+    ++ S G+ S G+LG         P+ I AL   N+ +V+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEHSL 88

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV   G ++ WG G      +G++ EIS + P+K++  + G++I  + CG +H+ A++  
Sbjct: 89  AVCHKGRVFAWGAGSEGQLGIGELKEIS-FTPKKIT-TLNGIKIIQVSCGHYHSLALSKD 146

Query: 422 GKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            ++F++G  + G LG G +  S + P+ V +L+ +     + G  H+ A+  + G +   
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-SLCGTS--- 202

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVV---PLCVKVSDDISFCKVACGHSITIALTAT 537
                   F WG  + GQL        V    PL V    ++    ++CG   T  LT  
Sbjct: 203 --------FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQD 254

Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTW 595
           G+VF+ G    GQLG SP    + P  +E  I    +  + CGSYH +A V +  +V ++
Sbjct: 255 GKVFTFGDNRSGQLGYSPTPEKRGPQLVE--IIDGLVSQVDCGSYHTLAYVHTTGQVVSF 312

Query: 596 GKGAN--GQLGHGD--NENKQTPTLV--EALRDKQVKSVVCGS--NFT 635
           G G +  G+  H +   EN     L+  E L   QVK +  G+  NF 
Sbjct: 313 GHGPSDTGKPTHPEALTENFDISCLISAEDLVGVQVKHIFAGTYANFV 360



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 113/247 (45%), Gaps = 27/247 (10%)

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G ++     G  H+  + +  ++ + GD + G LG        +P  ++ L+ L   + S
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVS 81

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVPLCVKVSDDIS 520
           CG  H+ A+                ++F WG G+EGQLG G+  E    P  +   + I 
Sbjct: 82  CGKEHSLAVCH------------KGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNGIK 129

Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDI--- 576
             +V+CGH  ++AL+   QVFS G   +GQLG     GK FP++     + R +E I   
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG----LGKEFPSQASPQ-RVRSLEGIPLA 184

Query: 577 --ACGSYHIAVVSSKSEVYTWGKGANGQLG-HGDNENKQT--PTLVEALRDKQVKSVVCG 631
             A G  H   +S     + WG  + GQL   G N   Q+  P  V AL++  V  + CG
Sbjct: 185 QVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCG 244

Query: 632 SNFTAAI 638
           +  TA +
Sbjct: 245 AEHTAVL 251


>gi|401396776|ref|XP_003879904.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
 gi|325114312|emb|CBZ49869.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
          Length = 1080

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 175/398 (43%), Gaps = 59/398 (14%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+++++   +++ S+A G     +V++ G+++ WG  S G+LG G   D S P+++ AL 
Sbjct: 102 PRLVDALKGINSASVAAGGMQMAVVSQSGELYMWGCNSEGQLGTGDRRDASVPRVVKALQ 161

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWG------DGIHNLGL-----------LGQVSEIS 389
           G  + +VAC + HT      G  Y WG       G+H L +            G  ++ +
Sbjct: 162 GKIVKVVACAQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVSAPPGAPTKGA 221

Query: 390 HWIP---------RKVSGQMEGLQISSICCGPWHTAAI----TSAGKLFTFGDGTFGALG 436
              P          +V   + G  I+ + CG +HTA +         LFT G G  G LG
Sbjct: 222 RTEPLASACLVCTPRVLESLCGYFITDVACGIYHTAFLGVYEQHKTSLFTCGLGLNGRLG 281

Query: 437 HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
           HGD     +P  V  L+ L     +CG  HTA +      TSG        L+ WG  A 
Sbjct: 282 HGDEEDRHLPTPVHALENLNITAIACGAHHTACV------TSGGT------LYMWGGAAF 329

Query: 497 GQLGHGDAE-----PRVV--PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
           G+LG G        P+ V  PL  K     +   VA G   +  +T  G++++ G     
Sbjct: 330 GKLGLGSTRGSQLLPKHVGGPLRNK-----TVVSVALGSQHSACVTTDGELYTWGQGRRL 384

Query: 550 QLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
                G + +F P R+E  +   ++  + CG  H A +     V+ WG   +  LGHGD 
Sbjct: 385 GHEVQGESDEFLPRRVEALVG-LFVIHVVCGDAHTACIVENGNVWAWGT--SRILGHGDL 441

Query: 609 ENKQT-PTLVEALRDKQVKSVVCGSNFTAAICLHKGVS 645
           E     P+ + AL  K V  + C   FTAA C  + VS
Sbjct: 442 EAPPNRPSCLRALSGKGVVQLSCAPTFTAAFCDPQRVS 479



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 154/336 (45%), Gaps = 48/336 (14%)

Query: 337 SYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV 396
           S P+L+DAL G N   VA G      V+ SG+LY W  G ++ G LG        +PR V
Sbjct: 100 SSPRLVDALKGINSASVAAGGMQMAVVSQSGELYMW--GCNSEGQLGTGDRRDASVPRVV 157

Query: 397 SGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG-HGDRSSTSV---------- 445
              ++G  +  + C   HT      G  + +G    G LG HG    +S           
Sbjct: 158 K-ALQGKIVKVVACAQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVSAPPGA 216

Query: 446 ------------------PREVETLKELKTVMASCGVWHTAAI-VEVAGKTSGSNGLSSK 486
                             PR +E+L        +CG++HTA + V    KTS        
Sbjct: 217 PTKGARTEPLASACLVCTPRVLESLCGYFITDVACGIYHTAFLGVYEQHKTS-------- 268

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
            LFT G G  G+LGHGD E R +P  V   ++++   +ACG   T  +T+ G ++  G A
Sbjct: 269 -LFTCGLGLNGRLGHGDEEDRHLPTPVHALENLNITAIACGAHHTACVTSGGTLYMWGGA 327

Query: 547 DYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
            +G+LG   + G    P  + G ++++ +  +A GS H A V++  E+YTWG+G   +LG
Sbjct: 328 AFGKLGLGSTRGSQLLPKHVGGPLRNKTVVSVALGSQHSACVTTDGELYTWGQGR--RLG 385

Query: 605 H--GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           H      ++  P  VEAL    V  VVCG   TA I
Sbjct: 386 HEVQGESDEFLPRRVEALVGLFVIHVVCGDAHTACI 421



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 101/221 (45%), Gaps = 18/221 (8%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           +F  G GL NG LG           D  D  LP  + +   L+  +IACG+ H   VT  
Sbjct: 269 LFTCGLGL-NGRLG---------HGDEEDRHLPTPVHALENLNITAIACGAHHTACVTSG 318

Query: 315 GQIFSWGEGSGGKLGHG-VEADVSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           G ++ WG  + GKLG G        PK +   L    +  VA G  H+  VT  G+LYTW
Sbjct: 319 GTLYMWGGAAFGKLGLGSTRGSQLLPKHVGGPLRNKTVVSVALGSQHSACVTTDGELYTW 378

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           G G   LG   Q  E   ++PR+V   + GL +  + CG  HTA I   G ++ +  GT 
Sbjct: 379 GQG-RRLGHEVQ-GESDEFLPRRVE-ALVGLFVIHVVCGDAHTACIVENGNVWAW--GTS 433

Query: 433 GALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
             LGHGD  +  + P  +  L     V  SC    TAA  +
Sbjct: 434 RILGHGDLEAPPNRPSCLRALSGKGVVQLSCAPTFTAAFCD 474


>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
 gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 1473

 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 128/414 (30%), Positives = 187/414 (45%), Gaps = 48/414 (11%)

Query: 230 RISLSSAVSSSSQGSCHEDFDGL-GDVFIWGEGLGNGLLGGAVNGVEISSADRR-DALLP 287
           RI   S ++S + G+ H    G  G V+ WG      L  G  N       DR   A LP
Sbjct: 262 RIPTLSGITSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWN-------DRAVPAPLP 314

Query: 288 KVLESTVV--LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
            V  +  V  LDA S+A        + + G + +WG  + G+LG G  AD S P L+  L
Sbjct: 315 GVGGARAVASLDAGSLA--------LLEGGDVLAWGANNSGQLGDGDTADRSTPSLVPEL 366

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
             S +  V  G  H  A+   G L+ WG G+   G LG      H +P  V G      +
Sbjct: 367 --SAVTAVVGGAQHALALRKDGTLWAWGGGL--AGQLGHGGSERHVVPATVMGLTN---V 419

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
           +S+  G +H+ A    G ++ +G  ++G LG G  +   VP  V  L  ++ V A+    
Sbjct: 420 TSMATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVPVRVPGLPSVRAVAAAG--- 476

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
           H +  V + G            ++TWG  A GQLG G    R  P  V VS   S   +A
Sbjct: 477 HHSIAVAMDGT-----------VWTWGRNAAGQLGDGTTRDRARP--VAVSGLTSVLAIA 523

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIA 584
            G S  +AL + G V++ G    GQLG   S  K  P R+ G      I+ +A G+Y   
Sbjct: 524 AGGSHVLALRSDGDVWAWGYNALGQLGDGTSGDKLTPVRVPGLAP---IQSVAAGTYFSM 580

Query: 585 VVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            +++   V+TWG+G  GQLG G    + +P  V+ L D  ++++  GS    A+
Sbjct: 581 ALANDGTVWTWGEGFEGQLGDGGGVQRLSPVAVKGLSD--IRNISVGSAHALAV 632



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 187/418 (44%), Gaps = 58/418 (13%)

Query: 275  EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
            ++      D L P+ +E+  + D   IA G  HA+ V + G +++WG  + G+LG G E 
Sbjct: 898  QVGDGTVEDRLTPRRIEA--LSDVMVIALGESHALAVGEDGTVWAWGANASGQLGDGGET 955

Query: 335  DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
                P  +  L G  +  VA G   + AV   G  + W  G +  G LG  S  S  +P 
Sbjct: 956  PSLLPARVKGLEG--VGSVAAGRAFSLAVRDDGTAWAW--GANESGQLGDGSNQSRRVPH 1011

Query: 395  KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-PREVETLK 453
            +V+  ++GL+  ++  G  H  A+   G ++ +GD T G LG G  + T + P+ V  L 
Sbjct: 1012 RVA-SVKGLR--AVSAGAHHAMALGEDGAVWAWGDNTLGQLGDGTSAFTVMWPQRVAELS 1068

Query: 454  ELKTVMA----SCGVWH------------------------TAAIVEVAGK------TSG 479
            ++++V A    S  V H                        + A V++ G       T G
Sbjct: 1069 DVESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLSPAEVKIGGSKARTVVTVG 1128

Query: 480  SNG------LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
            + G      ++   L  WGD A GQLG G    R  P  ++    ++       HS+ + 
Sbjct: 1129 AWGQHAVALMADGTLQAWGDNATGQLGDGTTTRRSSPGEIRGVTRVTAVSTGAWHSLALR 1188

Query: 534  LTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
            L  T  V++ G+  +GQLG   +T +  P  ++G    R +  IA G YH   V S   V
Sbjct: 1189 LDGT--VWAWGANGFGQLGDGTTTARAVPVPVQG---LRDVVAIAAGGYHSVAVRSDGTV 1243

Query: 593  YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHS 650
            +TWG    GQLG G +E++  P  V  L  + V++V  G + + A+     VS   H+
Sbjct: 1244 WTWGYNTFGQLGDGTSESRALPVQVHKL--EGVQAVTGGDHHSLALHADGTVSGWGHN 1299



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 161/349 (46%), Gaps = 34/349 (9%)

Query: 300  SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
            ++    +HAV +   G + +WG+ + G+LG G     S P  I  +  + +  V+ G +H
Sbjct: 1126 TVGAWGQHAVALMADGTLQAWGDNATGQLGDGTTTRRSSPGEIRGV--TRVTAVSTGAWH 1183

Query: 360  TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
            + A+ L G ++ WG   +  G LG  +  +  +P  V G  +   + +I  G +H+ A+ 
Sbjct: 1184 SLALRLDGTVWAWG--ANGFGQLGDGTTTARAVPVPVQGLRD---VVAIAAGGYHSVAVR 1238

Query: 420  SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
            S G ++T+G  TFG LG G   S ++P +V  L+ ++ V       H +  +   G  SG
Sbjct: 1239 SDGTVWTWGYNTFGQLGDGTSESRALPVQVHKLEGVQAVTGGD---HHSLALHADGTVSG 1295

Query: 480  SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                       WG  A GQLG G    R  P+ +K  D ++  +    H  T+AL   G 
Sbjct: 1296 -----------WGHNASGQLGDGSRTDRYTPVRLKDVDGLTEVRAGAAH--TVALGKDGT 1342

Query: 540  VFSMGSADYGQLGSPGSTGK----FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
            V++ G   +GQLG  G TG      P  + G         I  G++H      +   +TW
Sbjct: 1343 VWTWGDNAHGQLGD-GVTGPRMRLVPKPVSGLPA---ATAIGAGAWHSFASGPEEGAFTW 1398

Query: 596  GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            G+ ++GQLG GDN  +  P  ++ L   +   V+ G   T+     +GV
Sbjct: 1399 GRNSHGQLGVGDNAPRAEPQRMKLLSGLK---VIAGGADTSLAMTQEGV 1444



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 187/410 (45%), Gaps = 49/410 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG G   G LGGA    +  S  R    LP VLE  V     S+  G  H++ + 
Sbjct: 85  GAVWAWG-GNSAGQLGGADTSFQRLSPAR----LP-VLEDIV-----SVVSGDAHSLALG 133

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +++WG  S G+LG G   D + P+ ++    +++  VA G+FH+  +   G ++ W
Sbjct: 134 ADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGF--TDVVAVAAGDFHSLVLKSDGTVWAW 191

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           G   H  G LGQ    +   P+ V G +EG  + ++  G   T A+ + G + ++G  +F
Sbjct: 192 GTNFH--GQLGQGHTQTGLWPKPVPG-LEG--VVALAAGFDFTLAVHADGAVSSWGANSF 246

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           G LG G  +    P  + TL  + +V A  G +H  A+        G +G     ++TWG
Sbjct: 247 GQLGLGTFTQRLSPERIPTLSGITSVAA--GTYHAVAL--------GKDG----TVWTWG 292

Query: 493 DGAEGQLGHGDAEPRVVPLCVK-VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
             + GQLG G    R VP  +  V    +   +  G   ++AL   G V + G+ + GQL
Sbjct: 293 SNSSGQLGDGTWNDRAVPAPLPGVGGARAVASLDAG---SLALLEGGDVLAWGANNSGQL 349

Query: 552 GSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           G   +  +  P+ +    +   +  +  G+ H   +     ++ WG G  GQLGHG +E 
Sbjct: 350 GDGDTADRSTPSLVP---ELSAVTAVVGGAQHALALRKDGTLWAWGGGLAGQLGHGGSER 406

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFN 660
              P  V  L +  V S+  GS        H   ++ D S+ +  RN + 
Sbjct: 407 HVVPATVMGLTN--VTSMATGS-------FHSLAALEDGSVWAWGRNSYG 447



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 163/395 (41%), Gaps = 76/395 (19%)

Query: 298  AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG---------- 347
            A+S+A G +H++++   G +++WGE   G+LG G  +    P  ++ L G          
Sbjct: 819  ARSVASGGQHSLVLACDGTVWTWGENQRGQLGDGTTSARVAPGRVEGLEGIVAVAGGGDT 878

Query: 348  --------------------------------------SNIHMVACGEFHTCAVTLSGDL 369
                                                  S++ ++A GE H  AV   G +
Sbjct: 879  SLALRSDGTVWAWGANASGQVGDGTVEDRLTPRRIEALSDVMVIALGESHALAVGEDGTV 938

Query: 370  YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
            + W  G +  G LG   E    +P +V G +EG  + S+  G   + A+   G  + +G 
Sbjct: 939  WAW--GANASGQLGDGGETPSLLPARVKG-LEG--VGSVAAGRAFSLAVRDDGTAWAWGA 993

Query: 430  GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
               G LG G   S  VP  V ++K L+ V  S G  H  A+ E               ++
Sbjct: 994  NESGQLGDGSNQSRRVPHRVASVKGLRAV--SAGAHHAMALGE------------DGAVW 1039

Query: 490  TWGDGAEGQLGHGDAEPRVV-PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
             WGD   GQLG G +   V+ P  V    D+    VA G   ++A+   G  FS GS +Y
Sbjct: 1040 AWGDNTLGQLGDGTSAFTVMWPQRVAELSDVE--SVAAGEQFSVAVAHDGTAFSWGSNEY 1097

Query: 549  GQLGSPGSTGK--FPTRIE-GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
            GQLG  G TG    P  ++ G  K R +  +     H   + +   +  WG  A GQLG 
Sbjct: 1098 GQLGD-GKTGPRLSPAEVKIGGSKARTVVTVGAWGQHAVALMADGTLQAWGDNATGQLGD 1156

Query: 606  GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            G    + +P  +  +   +V +V  G+  + A+ L
Sbjct: 1157 GTTTRRSSPGEIRGV--TRVTAVSTGAWHSLALRL 1189



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 178/423 (42%), Gaps = 63/423 (14%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WGEG   G LG      +     R   +  K L      D ++I+ GS HA+ V 
Sbjct: 586 GTVWTWGEGF-EGQLG------DGGGVQRLSPVAVKGLS-----DIRNISVGSAHALAVR 633

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +++WG+ + G+LG G   D   P  +  L G  I  V+ G  H+ A+   G +  W
Sbjct: 634 GDGTVWAWGDNNEGQLGDGSWMDRFAPVQVRNLTG--ITAVSGGRSHSLALHADGTVRAW 691

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           G   +  G LG  +  S  +P  + G + G+Q  ++  G  H  A+ +   L  +G   F
Sbjct: 692 GS--NGYGQLGDGTLTSRVLPSVIPG-LSGIQ--ALHPGHLHVLALHADKTLRGWGYNRF 746

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMA------------SCGVW--------------H 466
           G LG G    ++ P +V  +  ++ + A            S   W              H
Sbjct: 747 GQLGLGAAGWSARPVQVRGIGRVERLAAGRAHALLVRADGSVVAWGANASGQLGDGGTTH 806

Query: 467 TAAIVEVAG----KTSGSNGLSSKKL------FTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
            A  V V G    ++  S G  S  L      +TWG+   GQLG G    RV P  V+  
Sbjct: 807 GARAVTVRGVSCARSVASGGQHSLVLACDGTVWTWGENQRGQLGDGTTSARVAPGRVEGL 866

Query: 517 DDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIED 575
           + I    VA G   ++AL + G V++ G+   GQ+G      +  P RIE       +  
Sbjct: 867 EGI--VAVAGGGDTSLALRSDGTVWAWGANASGQVGDGTVEDRLTPRRIE---ALSDVMV 921

Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           IA G  H   V     V+ WG  A+GQLG G       P  V+ L  + V SV  G  F+
Sbjct: 922 IALGESHALAVGEDGTVWAWGANASGQLGDGGETPSLLPARVKGL--EGVGSVAAGRAFS 979

Query: 636 AAI 638
            A+
Sbjct: 980 LAV 982



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 162/347 (46%), Gaps = 45/347 (12%)

Query: 212  ASGGLDDANS--RSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGG 269
            A+G L D  +  RSS  +   ++  +AVS+ +  S     DG   V+ WG   G G LG 
Sbjct: 1150 ATGQLGDGTTTRRSSPGEIRGVTRVTAVSTGAWHSLALRLDG--TVWAWGAN-GFGQLG- 1205

Query: 270  AVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG 329
              +G   + A      +P  ++   + D  +IA G  H+V V   G +++WG  + G+LG
Sbjct: 1206 --DGTTTARA------VPVPVQG--LRDVVAIAAGGYHSVAVRSDGTVWTWGYNTFGQLG 1255

Query: 330  HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNL-GLLGQVSEI 388
             G     + P  +  L G  +  V  G+ H+ A+   G +  WG   HN  G LG  S  
Sbjct: 1256 DGTSESRALPVQVHKLEG--VQAVTGGDHHSLALHADGTVSGWG---HNASGQLGDGSRT 1310

Query: 389  SHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS--VP 446
              + P ++   ++GL  + +  G  HT A+   G ++T+GD   G LG G        VP
Sbjct: 1311 DRYTPVRLK-DVDGL--TEVRAGAAHTVALGKDGTVWTWGDNAHGQLGDGVTGPRMRLVP 1367

Query: 447  REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP 506
            + V  L     + A  G WH+ A    +G   G+        FTWG  + GQLG GD  P
Sbjct: 1368 KPVSGLPAATAIGA--GAWHSFA----SGPEEGA--------FTWGRNSHGQLGVGDNAP 1413

Query: 507  RVVPLCVKVSDDISFCKV-ACGHSITIALTATGQVFSMGSADYGQLG 552
            R  P  +K+   +S  KV A G   ++A+T  G + S GS+ +G LG
Sbjct: 1414 RAEPQRMKL---LSGLKVIAGGADTSLAMTQEGVLMSWGSSLHGTLG 1457


>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
 gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
          Length = 363

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/236 (35%), Positives = 126/236 (53%), Gaps = 19/236 (8%)

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           + ++ CG  H+A +T+ GKL+TFG   +G LGHG+  S + P  V+ LK  K  M +CG 
Sbjct: 37  VVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGR 96

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
            HT A  E            S  L+++G G +GQLGHGDAE   VP  ++  D   +  +
Sbjct: 97  NHTIAATE------------SGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHL 144

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIA 584
           ACG   + A+T  G++++ GS   GQ G  G   + PTR+     H  +  ++CG YH+A
Sbjct: 145 ACGSDFSAAITENGELYTWGSCGEGQNG-LGEDTEIPTRLH---LHGKVRMVSCGYYHMA 200

Query: 585 VVSSKSEVYTWGKGANGQLG--HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           VV+    +Y  G+   G+LG  H   +N      ++++ D QV    CG+ FTA +
Sbjct: 201 VVTEDGSLYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIED-QVVVAACGAEFTAVV 255



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 165/339 (48%), Gaps = 29/339 (8%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           +++CG +H+ +VT  G+++++G    G+LGHG     + P ++  L    ++MVACG  H
Sbjct: 39  NLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGRNH 98

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           T A T SG LY++G G    G LG        +P+ + G ++  +   + CG   +AAIT
Sbjct: 99  TIAATESGHLYSFGCG--GDGQLGHGDAEDSHVPKIIEG-LDVQKYKHLACGSDFSAAIT 155

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G+L+T+G    G  G G+   T +P  +    +++  M SCG +H A + E      G
Sbjct: 156 ENGELYTWGSCGEGQNGLGE--DTEIPTRLHLHGKVR--MVSCGYYHMAVVTE-----DG 206

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV-SDDISFCKVACGHSITIALTATG 538
           S       L+  G+   G+LG    +        K+ S +      ACG   T  +T  G
Sbjct: 207 S-------LYMCGEKEGGKLGLDHEQLDNTSQLQKIKSIEDQVVVAACGAEFTAVVTKNG 259

Query: 539 QVFSMGSADYGQLGSPGST--GKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
            V++ G  + GQLG   S    +FP RI     +K R    ++CG    AV++    +YT
Sbjct: 260 SVYTFGQGNQGQLGLGSSMMETEFPERIPLFEKVKAR---TVSCGESFTAVITKHGNLYT 316

Query: 595 WGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
           +G G +G+LG GD    N   P  V+   +  VK V CG
Sbjct: 317 FGDGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMVTCG 355



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 149/294 (50%), Gaps = 27/294 (9%)

Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
           ++CG+ H+  VT +G LYT+G   ++ G LG  +  S+  P  V  +++  ++  + CG 
Sbjct: 40  LSCGDEHSAVVTANGKLYTFG--CNDWGQLGHGNTKSYTKPSVVK-KLKPEKVYMVACGR 96

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
            HT A T +G L++FG G  G LGHGD   + VP+ +E L   K    +CG   +AAI E
Sbjct: 97  NHTIAATESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHLACGSDFSAAITE 156

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
                   NG    +L+TWG   EGQ G G  E   +P  + +   +    V+CG+    
Sbjct: 157 --------NG----ELYTWGSCGEGQNGLG--EDTEIPTRLHLHGKVRM--VSCGYYHMA 200

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIED----IACGSYHIAVVSS 588
            +T  G ++  G  + G+LG         ++++   K + IED     ACG+   AVV+ 
Sbjct: 201 VVTEDGSLYMCGEKEGGKLGLDHEQLDNTSQLQ---KIKSIEDQVVVAACGAEFTAVVTK 257

Query: 589 KSEVYTWGKGANGQLGHGDNENK-QTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
              VYT+G+G  GQLG G +  + + P  +      + ++V CG +FTA I  H
Sbjct: 258 NGSVYTFGQGNQGQLGLGSSMMETEFPERIPLFEKVKARTVSCGESFTAVITKH 311



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 156/322 (48%), Gaps = 33/322 (10%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           ++   + +    P V++         +ACG  H +  T+ G ++S+G G  G+LGHG   
Sbjct: 66  QLGHGNTKSYTKPSVVKKLKPEKVYMVACGRNHTIAATESGHLYSFGCGGDGQLGHGDAE 125

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
           D   PK+I+ L+      +ACG   + A+T +G+LYTWG        LG+ +E    IP 
Sbjct: 126 DSHVPKIIEGLDVQKYKHLACGSDFSAAITENGELYTWGSCGEGQNGLGEDTE----IPT 181

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG--HGDRSSTSVPREVETL 452
           ++   + G ++  + CG +H A +T  G L+  G+   G LG  H    +TS  ++++++
Sbjct: 182 RL--HLHG-KVRMVSCGYYHMAVVTEDGSLYMCGEKEGGKLGLDHEQLDNTSQLQKIKSI 238

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE-----PR 507
           ++ + V+A+CG   TA + +        NG     ++T+G G +GQLG G +      P 
Sbjct: 239 ED-QVVVAACGAEFTAVVTK--------NG----SVYTFGQGNQGQLGLGSSMMETEFPE 285

Query: 508 VVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGS--TGKFPTRIE 565
            +PL  KV        V+CG S T  +T  G +++ G   +G+LG      +  F     
Sbjct: 286 RIPLFEKVKART----VSCGESFTAVITKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKV 341

Query: 566 GNIKHRYIEDIACGSYHIAVVS 587
               +  ++ + CG  H+ V +
Sbjct: 342 KRFNNFTVKMVTCGGCHMLVAA 363



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 67/121 (55%)

Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIA 577
           D +   ++CG   +  +TA G++++ G  D+GQLG   +       +   +K   +  +A
Sbjct: 34  DDAVVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVA 93

Query: 578 CGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           CG  H    +    +Y++G G +GQLGHGD E+   P ++E L  ++ K + CGS+F+AA
Sbjct: 94  CGRNHTIAATESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHLACGSDFSAA 153

Query: 638 I 638
           I
Sbjct: 154 I 154



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 101/222 (45%), Gaps = 28/222 (12%)

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +  +G +FTFG   F      D  +         +++   V  SCG  H+A +       
Sbjct: 8   VPESGAVFTFGKTRFA-----DNLANKF-----WIRDDAVVNLSCGDEHSAVVT------ 51

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
             +NG    KL+T+G    GQLGHG+ +    P  VK         VACG + TIA T +
Sbjct: 52  --ANG----KLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVACGRNHTIAATES 105

Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           G ++S G    GQLG         P  IEG    +Y + +ACGS   A ++   E+YTWG
Sbjct: 106 GHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKY-KHLACGSDFSAAITENGELYTWG 164

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               GQ G G  E+ + PT +  L  K V+ V CG    A +
Sbjct: 165 SCGEGQNGLG--EDTEIPTRLH-LHGK-VRMVSCGYYHMAVV 202


>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Nomascus leucogenys]
          Length = 1020

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 168/347 (48%), Gaps = 35/347 (10%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDA 344
           LP+ +++   L+   ++CG +H++ V  +G++F+WG GS G+LG G   ++S+ PK I  
Sbjct: 65  LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGELKEISFTPKKITT 124

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGL 403
           LNG  I  V+CG +H+ A++    +++WG   H  G LG   E  S   P++V   +EG+
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQASPQRVRS-LEGI 181

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS---STSVPREVETLKELKTVMA 460
            ++ +  G  H+ A++  G  F +G  + G L    R+    ++ P  V  LK L  V  
Sbjct: 182 PLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYI 241

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
           SCG  HTA + +              K+FT+GD   GQLG+     +  P  V++ D + 
Sbjct: 242 SCGAEHTAVLTQ------------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVEIIDGL- 288

Query: 521 FCKVACGHSITIALT-ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
             +V CG   T+A    TGQV S G         P  TGK PT  E   ++    DI+C 
Sbjct: 289 VSQVDCGSYHTLAYVHTTGQVVSFGHG-------PSDTGK-PTHPEALTENF---DISCL 337

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP--TLVEALRDKQ 624
                +V  + +    G  AN    H D  + + P  TL E  R  Q
Sbjct: 338 ISAEDLVGVQVKHIFAGTYANFVTTHQDTSSTRAPGKTLPEISRISQ 384



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 171/348 (49%), Gaps = 30/348 (8%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G +H++L+    ++ S G+ S G+LG         P+ I AL   N+ +V+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVSCGKEHSL 88

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV   G ++ WG G      +G++ EIS + P+K++  + G++I  + CG +H+ A++  
Sbjct: 89  AVCHKGRVFAWGAGSEGQLGIGELKEIS-FTPKKIT-TLNGIKIIQVSCGHYHSLALSKD 146

Query: 422 GKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            ++F++G  + G LG G +  S + P+ V +L+ +     + G  H+ A+  + G +   
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-SLCGTS--- 202

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVV---PLCVKVSDDISFCKVACGHSITIALTAT 537
                   F WG  + GQL        V    PL V    ++    ++CG   T  LT  
Sbjct: 203 --------FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGAEHTAVLTQD 254

Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTW 595
           G+VF+ G    GQLG SP    + P  +E  I    +  + CGSYH +A V +  +V ++
Sbjct: 255 GKVFTFGDNRSGQLGYSPTPEKRGPQLVE--IIDGLVSQVDCGSYHTLAYVHTTGQVVSF 312

Query: 596 GKGAN--GQLGHGD--NENKQTPTLV--EALRDKQVKSVVCGS--NFT 635
           G G +  G+  H +   EN     L+  E L   QVK +  G+  NF 
Sbjct: 313 GHGPSDTGKPTHPEALTENFDISCLISAEDLVGVQVKHIFAGTYANFV 360



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 113/247 (45%), Gaps = 27/247 (10%)

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G ++     G  H+  + +  ++ + GD + G LG        +P  ++ L+ L   + S
Sbjct: 22  GAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAPRGELPEPIQALETLNVDLVS 81

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA-EPRVVPLCVKVSDDIS 520
           CG  H+ A+                ++F WG G+EGQLG G+  E    P  +   + I 
Sbjct: 82  CGKEHSLAVCH------------KGRVFAWGAGSEGQLGIGELKEISFTPKKITTLNGIK 129

Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDI--- 576
             +V+CGH  ++AL+   QVFS G   +GQLG     GK FP++     + R +E I   
Sbjct: 130 IIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG----LGKEFPSQASPQ-RVRSLEGIPLA 184

Query: 577 --ACGSYHIAVVSSKSEVYTWGKGANGQLG-HGDNENKQT--PTLVEALRDKQVKSVVCG 631
             A G  H   +S     + WG  + GQL   G N   Q+  P  V AL++  V  + CG
Sbjct: 185 QVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCG 244

Query: 632 SNFTAAI 638
           +  TA +
Sbjct: 245 AEHTAVL 251


>gi|345795569|ref|XP_535652.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Canis lupus familiaris]
          Length = 1263

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 149/287 (51%), Gaps = 25/287 (8%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGEFH 359
           I CG  H++ ++K G++F+WG+   G+LG G +   +  P+L++ L+G  +  ++ G+ H
Sbjct: 382 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGKAH 441

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           + A+++SG++Y+WG   ++LG LG         P  +   ++  ++  + CG  HTA +T
Sbjct: 442 SMALSMSGNIYSWGR--NDLGQLGLGHTNGEDFPSLIEA-LDNQKVEFLACGGSHTALLT 498

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G +FTFG G +G LGH    +   PR V  L   +    +CG WHT A V   G    
Sbjct: 499 KDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLAYVSDLG---- 554

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV--SDDISF-CKVACGHSITIALTA 536
                  K+F++G G EGQLG+G    +++PL +K+  ++++ F  + +    I IA   
Sbjct: 555 -------KVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESRTSEKELIMIAGGN 607

Query: 537 TGQVFSMGSAD-YGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
              +  MG  + Y  L       + PT  EG +K R+I D+    + 
Sbjct: 608 QSILLWMGKKNPYVNLRR-----RIPTLNEGTVK-RWIADVGTKQWQ 648



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 150/338 (44%), Gaps = 37/338 (10%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
           +   S+  G++H ++++  G+ F +               + + +    L   +I  + C
Sbjct: 337 MKIHSVDQGAEHMLILSSDGKPFEYN------------YSIEHARFQCILQEKSIIQITC 384

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR-KVSGQMEGLQISSICCGPWH 414
           G++H+ A++  G+L+ WG  +H  G LG V  +   IP  ++   + G+ +  I  G  H
Sbjct: 385 GDYHSLALSKGGELFAWGQNLH--GQLG-VGRLFTSIPTPQLVEHLSGVPLVQISAGKAH 441

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           + A++ +G ++++G    G LG G  +    P  +E L   K    +CG  HTA + +  
Sbjct: 442 SMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTK-- 499

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                 +GL    +FT+G G  GQLGH   +  + P  V         +VACG   T+A 
Sbjct: 500 ------DGL----VFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLAY 549

Query: 535 TA-TGQVFSMGSADYGQLGSPGSTGK---FPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
            +  G+VFS GS   GQLG+ G+  +    P ++  N + ++ E        I +     
Sbjct: 550 VSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKF-ESRTSEKELIMIAGGNQ 608

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSV 628
            +  W    N  +    N  ++ PTL E    + +  V
Sbjct: 609 SILLWMGKKNPYV----NLRRRIPTLNEGTVKRWIADV 642



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 104/195 (53%), Gaps = 13/195 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++F WG+ L +G LG       I +        P+++E    +    I+ G  H++ ++
Sbjct: 396 GELFAWGQNL-HGQLGVGRLFTSIPT--------PQLVEHLSGVPLVQISAGKAHSMALS 446

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G I+SWG    G+LG G      +P LI+AL+   +  +ACG  HT  +T  G ++T+
Sbjct: 447 MSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTF 506

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G +  G LG  S  +   PR V+ ++ G +++ + CG WHT A ++  GK+F+FG G 
Sbjct: 507 GAGKY--GQLGHNSTQNELRPRLVT-ELAGNRVTQVACGRWHTLAYVSDLGKVFSFGSGK 563

Query: 432 FGALGHGDRSSTSVP 446
            G LG+G   +  +P
Sbjct: 564 EGQLGNGGTHNQLIP 578



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 113/237 (47%), Gaps = 27/237 (11%)

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
           ++I S+  G  H   ++S GK F +              S    R    L+E   +  +C
Sbjct: 337 MKIHSVDQGAEHMLILSSDGKPFEYN------------YSIEHARFQCILQEKSIIQITC 384

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISF 521
           G +H+ A+         S G    +LF WG    GQLG G     +  P  V+    +  
Sbjct: 385 GDYHSLAL---------SKG---GELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPL 432

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
            +++ G + ++AL+ +G ++S G  D GQLG   + G+ FP+ IE  + ++ +E +ACG 
Sbjct: 433 VQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEA-LDNQKVEFLACGG 491

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            H A+++    V+T+G G  GQLGH   +N+  P LV  L   +V  V CG   T A
Sbjct: 492 SHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLA 548



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 1/120 (0%)

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT-RIEGNIKHRYIEDIAC 578
           S  ++ CG   ++AL+  G++F+ G   +GQLG        PT ++  ++    +  I+ 
Sbjct: 378 SIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISA 437

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G  H   +S    +Y+WG+   GQLG G    +  P+L+EAL +++V+ + CG + TA +
Sbjct: 438 GKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALL 497


>gi|440790501|gb|ELR11783.1| RasGEF domain containing protein [Acanthamoeba castellanii str.
           Neff]
          Length = 2063

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 150/314 (47%), Gaps = 40/314 (12%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           +ACG  H   ++ +G +F+WG G  G+LGHG E D + P+L+  L  +NI  VA GE HT
Sbjct: 14  VACGWSHTAAISAKGLLFTWGMGRYGRLGHGDETDQNAPRLVGELLNTNIVGVALGERHT 73

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP--RKVSGQMEGL------QISSICCGP 412
            A + +G+LY+WGD   N G+LG   E+    P  +     +E L      +++ + CG 
Sbjct: 74  AAFSETGELYSWGDA--NFGVLGH-GELQEGDPQIQTTPKLIEYLSRVLRKKVTHVACGA 130

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGD---RSSTSVPREVETLKELKTVMASCGVWHTAA 469
           +HT   T+    + +GDG  G LG G    R+    P+ +  L        +CG  H A 
Sbjct: 131 YHTLCTTADKLTYIWGDGGHGVLGQGGDFGRTIEWTPQSIGALAGRGVQQIACGWAHCAV 190

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHS 529
           +++               L+TWG+GA G+LGHGD E    P  V         ++ACG +
Sbjct: 191 LMDTG------------DLYTWGEGAGGRLGHGDEEDHKEPHQVASLRGTRIVQIACGFA 238

Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTG------------KFPTRIEGNIKHRYIEDIA 577
              AL+  G+VF  G+   G+LG  G  G            K P R+E  ++   I  +A
Sbjct: 239 HMAALSDKGEVFVCGTG-CGRLGLDGEQGKSNPEHTEVANQKIPRRVEP-LRGLQILQVA 296

Query: 578 CGSYHIAVVSSKSE 591
           CG     V+ +  +
Sbjct: 297 CGMISTIVLQNTQD 310



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 127/251 (50%), Gaps = 25/251 (9%)

Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
           +  ++IS + CG  HTAAI++ G LFT+G G +G LGHGD +  + PR V  L     V 
Sbjct: 6   LRRIKISRVACGWSHTAAISAKGLLFTWGMGRYGRLGHGDETDQNAPRLVGELLNTNIVG 65

Query: 460 ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE---------PRVVP 510
            + G  HTAA  E              +L++WGD   G LGHG+ +         P+++ 
Sbjct: 66  VALGERHTAAFSETG------------ELYSWGDANFGVLGHGELQEGDPQIQTTPKLIE 113

Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSP---GSTGKFPTRIEGN 567
              +V        VACG   T+  TA    +  G   +G LG     G T ++  +  G 
Sbjct: 114 YLSRVLRK-KVTHVACGAYHTLCTTADKLTYIWGDGGHGVLGQGGDFGRTIEWTPQSIGA 172

Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKS 627
           +  R ++ IACG  H AV+    ++YTWG+GA G+LGHGD E+ + P  V +LR  ++  
Sbjct: 173 LAGRGVQQIACGWAHCAVLMDTGDLYTWGEGAGGRLGHGDEEDHKEPHQVASLRGTRIVQ 232

Query: 628 VVCGSNFTAAI 638
           + CG    AA+
Sbjct: 233 IACGFAHMAAL 243



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 139/308 (45%), Gaps = 50/308 (16%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           G +F WG G    LG+G              D  D   P+++   +  +   +A G +H 
Sbjct: 28  GLLFTWGMGRYGRLGHG--------------DETDQNAPRLVGELLNTNIVGVALGERHT 73

Query: 309 VLVTKQGQIFSWGEGSGGKLGHG--VEADV---SYPKLIDALN---GSNIHMVACGEFHT 360
              ++ G+++SWG+ + G LGHG   E D    + PKLI+ L+      +  VACG +HT
Sbjct: 74  AAFSETGELYSWGDANFGVLGHGELQEGDPQIQTTPKLIEYLSRVLRKKVTHVACGAYHT 133

Query: 361 CAVTLSGDLYTWGDGIHNLGL----LGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
              T     Y WGDG H +       G+  E   W P+ + G + G  +  I CG  H A
Sbjct: 134 LCTTADKLTYIWGDGGHGVLGQGGDFGRTIE---WTPQSI-GALAGRGVQQIACGWAHCA 189

Query: 417 AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI-----V 471
            +   G L+T+G+G  G LGHGD      P +V +L+  + V  +CG  H AA+     V
Sbjct: 190 VLMDTGDLYTWGEGAGGRLGHGDEEDHKEPHQVASLRGTRIVQIACGFAHMAALSDKGEV 249

Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLG--HGDAEPRVVPLCVKVSDDISFCKVACGHS 529
            V G   G  GL         DG +G+    H +   + +P  V+    +   +VACG  
Sbjct: 250 FVCGTGCGRLGL---------DGEQGKSNPEHTEVANQKIPRRVEPLRGLQILQVACGMI 300

Query: 530 ITIALTAT 537
            TI L  T
Sbjct: 301 STIVLQNT 308



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/195 (31%), Positives = 92/195 (47%), Gaps = 23/195 (11%)

Query: 448 EVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR 507
           +V +L+ +K    +CG  HTAAI         + GL    LFTWG G  G+LGHGD   +
Sbjct: 2   QVASLRRIKISRVACGWSHTAAI--------SAKGL----LFTWGMGRYGRLGHGDETDQ 49

Query: 508 VVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG------SPGSTGKFP 561
             P  V    + +   VA G   T A + TG+++S G A++G LG              P
Sbjct: 50  NAPRLVGELLNTNIVGVALGERHTAAFSETGELYSWGDANFGVLGHGELQEGDPQIQTTP 109

Query: 562 TRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ---TPTL 616
             IE    +  + +  +ACG+YH    ++    Y WG G +G LG G +  +    TP  
Sbjct: 110 KLIEYLSRVLRKKVTHVACGAYHTLCTTADKLTYIWGDGGHGVLGQGGDFGRTIEWTPQS 169

Query: 617 VEALRDKQVKSVVCG 631
           + AL  + V+ + CG
Sbjct: 170 IGALAGRGVQQIACG 184


>gi|23503098|sp|Q92834.2|RPGR_HUMAN RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
           Flags: Precursor
 gi|119579846|gb|EAW59442.1| retinitis pigmentosa GTPase regulator, isoform CRA_b [Homo sapiens]
          Length = 1020

 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 176/358 (49%), Gaps = 38/358 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H+ +VT   +++ +G  + G+LG G ++ +S P  + AL    + + ACG  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 361 CAVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
              T  G++Y T G+    LG LG   E + +    +S      +I  +  G   +AA+T
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG-LGDTEERNTF--HVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G+LF +GD + G +G  + S+  VP++V   K +  +  SCG +H+A +      T G
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVT-----TDG 209

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
                  +L+ +G+   G+LG  +      R   L  ++ + +   +VACG   T+ LT 
Sbjct: 210 -------ELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV--IQVACGGEHTVVLTE 260

Query: 537 TGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
              V++ G   +GQLG     G F      P  IE NI+ + I  I+CG  H A+++   
Sbjct: 261 NA-VYTFGLGQFGQLG----LGTFLFETSEPKVIE-NIRDQTISYISCGENHTALITDIG 314

Query: 591 EVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCGS-NFTAAICLHKGVS 645
            +YT+G G +G+LG G  +  N   PTL        VK V CG  +       H+GV+
Sbjct: 315 LMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAPHRGVA 372



 Score = 47.8 bits (112), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDA 344
           PKV+E+        I+CG  H  L+T  G ++++G+G  GKLG G+E   ++  P L   
Sbjct: 286 PKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSN 345

Query: 345 LNGSNIHMVACGEFH 359
                + +VACG  H
Sbjct: 346 FLRFIVKLVACGGCH 360


>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
          Length = 449

 Score =  135 bits (339), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 179/357 (50%), Gaps = 26/357 (7%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+ LE+   L     A G +H++L+    +++S G+ S G+LG         P+ I AL+
Sbjct: 12  PRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQALS 71

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
             +I +V+CG+ H+ AV   G ++TWG G      +G+  EIS ++P K++  + G++I 
Sbjct: 72  TVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEIS-FMPTKIN-SLAGIKII 129

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVW 465
            + CG +H+ A++  G++F++G    G LG G+   S + P++V++L+ +     + G  
Sbjct: 130 QVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGIPLAQVAAGGT 189

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQL---GHGDAEPRVVPLCVKVSDDISFC 522
           H+ A+  + G +           F WG+   GQL   G+   E    P  +     ++  
Sbjct: 190 HSFAL-SLMGTS-----------FGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVV 237

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQL-GSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
            ++CG+  T  LT  GQVF+ G +   QL  SP S    P  IEG   H  +  I CGSY
Sbjct: 238 YISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGGH--VSQIECGSY 295

Query: 582 H-IAVVSSKSEVYTWGKGAN--GQLGHGDNENKQTPTLVEA--LRDKQVKSVVCGSN 633
           H IA V +  +V + G+G +      H +        L+ A  L D +VK +  G++
Sbjct: 296 HTIAYVYTTGQVVSLGRGPSCTSNATHQEAACSDVTCLLSAKDLVDIEVKDIFAGAH 352



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 115/252 (45%), Gaps = 18/252 (7%)

Query: 228 SFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLP 287
           +  I L S     S   CH+     G VF WG G   G LG            +  + +P
Sbjct: 72  TVHIDLVSCGKEHSVAVCHQ-----GRVFTWGAG-SEGQLG--------IGESKEISFMP 117

Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALN 346
             + S   +    ++CG  H++ +++ GQ+FSWG    G+LG G      + P+ + +L 
Sbjct: 118 TKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLE 177

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQI 405
           G  +  VA G  H+ A++L G  + WG+     L L G  ++   + P  + G ++ L +
Sbjct: 178 GIPLAQVAAGGTHSFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSI-GALKTLNV 236

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
             I CG  HT+ +T  G++FTFG  +   L H  RS    P+ +E +         CG +
Sbjct: 237 VYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSPRSGRGGPQLIEGIGG-HVSQIECGSY 295

Query: 466 HTAAIVEVAGKT 477
           HT A V   G+ 
Sbjct: 296 HTIAYVYTTGQV 307



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 17/153 (11%)

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           FTW  G            R  P  ++    +   K A G   ++ L +  +V+S G    
Sbjct: 3   FTWAPG------------RRQPRRLEAGTGLKLLKAASGERHSLLLFSNHRVYSCGDNSR 50

Query: 549 GQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
           GQLG  SP ST K P  I+  +   +I+ ++CG  H   V  +  V+TWG G+ GQLG G
Sbjct: 51  GQLGQKSPQST-KRPEPIQA-LSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIG 108

Query: 607 DN-ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           ++ E    PT + +L   ++  V CG   + A+
Sbjct: 109 ESKEISFMPTKINSLAGIKIIQVSCGHYHSLAL 141



 Score = 42.0 bits (97), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 2/83 (2%)

Query: 561 PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           P R+E     + ++  A G  H  ++ S   VY+ G  + GQLG    ++ + P  ++AL
Sbjct: 12  PRRLEAGTGLKLLKA-ASGERHSLLLFSNHRVYSCGDNSRGQLGQKSPQSTKRPEPIQAL 70

Query: 621 RDKQVKSVVCGSNFTAAICLHKG 643
               +  V CG   + A+C H+G
Sbjct: 71  STVHIDLVSCGKEHSVAVC-HQG 92


>gi|195345961|ref|XP_002039537.1| GM23028 [Drosophila sechellia]
 gi|194134763|gb|EDW56279.1| GM23028 [Drosophila sechellia]
          Length = 725

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/238 (34%), Positives = 121/238 (50%), Gaps = 14/238 (5%)

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
           + ++ I CG  H+AAIT++G + T+G G +G LGHGD      P+ VE L   + +  +C
Sbjct: 1   MSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIAC 60

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
           G          +G            +++WGDG  G+LG G ++   +P  ++    +   
Sbjct: 61  G----------SGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVV 110

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGS 580
           KV CG   ++ALT +G V++ G  D+ +LG  GS    + P ++   ++ + I  IA GS
Sbjct: 111 KVECGSQFSVALTKSGAVYTWGKGDFHRLGH-GSVDHVRRPKKVAA-LQGKKIISIATGS 168

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            H    S   EVYTWG    GQLG G     Q P LV AL+ K +  V CGS  T A+
Sbjct: 169 LHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 226



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 121/244 (49%), Gaps = 17/244 (6%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
           +    IACGS H+  +T  G + +WG+G  G+LGHG   D   PKL++AL G     +AC
Sbjct: 1   MSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIAC 60

Query: 356 --GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
             G+  T  +T   ++++WGDG  + G LG+       +P K+   + GL +  + CG  
Sbjct: 61  GSGDAQTLCITDDDNVWSWGDG--DYGKLGRGGSDGCKLPYKIE-SLAGLGVVKVECGSQ 117

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
            + A+T +G ++T+G G F  LGHG       P++V  L+  K +  + G  H  A  + 
Sbjct: 118 FSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSD- 176

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
                      S +++TWGD  EGQLG G       P  V         KV CG + T+A
Sbjct: 177 -----------SGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLA 225

Query: 534 LTAT 537
           L+ +
Sbjct: 226 LSTS 229



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 114/225 (50%), Gaps = 25/225 (11%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           G V  WG+G    LG+G              D  D L PK++E+ +   A  IACGS  A
Sbjct: 20  GHVLTWGKGRYGRLGHG--------------DSEDQLRPKLVEALLGYRAIDIACGSGDA 65

Query: 309 --VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
             + +T    ++SWG+G  GKLG G       P  I++L G  +  V CG   + A+T S
Sbjct: 66  QTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKS 125

Query: 367 GDLYTWGDG-IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
           G +YTWG G  H LG  G V  +    P+KV+  ++G +I SI  G  H  A + +G+++
Sbjct: 126 GAVYTWGKGDFHRLG-HGSVDHVRR--PKKVAA-LQGKKIISIATGSLHCVACSDSGEVY 181

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
           T+GD   G LG G  ++   PR V  L+    V  +CG  HT A+
Sbjct: 182 TWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 226



 Score = 98.6 bits (244), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 108/238 (45%), Gaps = 17/238 (7%)

Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
           +ACG  H+ A+T SG + TWG G +  G LG         P+ V   + G +   I CG 
Sbjct: 6   IACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEALL-GYRAIDIACGS 62

Query: 413 --WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
               T  IT    ++++GDG +G LG G      +P ++E+L  L  V   CG   + A+
Sbjct: 63  GDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVAL 122

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
            +            S  ++TWG G   +LGHG  +    P  V          +A G   
Sbjct: 123 TK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLH 170

Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
            +A + +G+V++ G  D GQLG    T     R+   ++ ++I  + CGS H   +S+
Sbjct: 171 CVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALST 228



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 95/184 (51%), Gaps = 16/184 (8%)

Query: 238 SSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLD 297
           S  +Q  C  D D   +V+ WG+G    L  G  +G +          LP  +ES   L 
Sbjct: 62  SGDAQTLCITDDD---NVWSWGDGDYGKLGRGGSDGCK----------LPYKIESLAGLG 108

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
              + CGS+ +V +TK G +++WG+G   +LGHG    V  PK + AL G  I  +A G 
Sbjct: 109 VVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGS 168

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
            H  A + SG++YTWGD  ++ G LG  +  +   PR V+  ++G  I  + CG  HT A
Sbjct: 169 LHCVACSDSGEVYTWGD--NDEGQLGDGTVTAIQRPRLVAA-LQGKHIVKVTCGSAHTLA 225

Query: 418 ITSA 421
           ++++
Sbjct: 226 LSTS 229



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 43/68 (63%)

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
           + DIACGS H A +++   V TWGKG  G+LGHGD+E++  P LVEAL   +   + CGS
Sbjct: 3   VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGS 62

Query: 633 NFTAAICL 640
                +C+
Sbjct: 63  GDAQTLCI 70


>gi|326490515|dbj|BAJ84921.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 419

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 173/367 (47%), Gaps = 52/367 (14%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH----MVAC 355
           S++CG  H + +T+ G++F+ G    G+LG G     S P  +D +  S  H     ++ 
Sbjct: 71  SLSCGGAHTLFLTEGGRVFATGLNDFGQLGIGS----SMPHTLDPVEVSGFHEKVVQISA 126

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
           G  H+CAVT  G+L+ WG        LG+ +      PRKV   +  +++     G  H+
Sbjct: 127 GNHHSCAVTADGELFVWGKNSSGQLGLGKSAGKVVSTPRKVD-YLADVRVKMTALGSEHS 185

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSS---------TSVPREVETLKELKTVMASCGVWH 466
             +T  G+  ++G    G LGHG +SS            PR ++ L  +K    + G+ H
Sbjct: 186 IVVTEDGEALSWGAAGGGRLGHGHKSSFLGFAMTSNEYTPRLIKNLDGIKIKRIAAGMLH 245

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK-VA 525
           +A I E               +F +G   E  LG  +  PR       V ++I F + VA
Sbjct: 246 SACIDE------------KGTVFIFGQKTEKVLGRSNDAPRP-----SVVEEIQFSEEVA 288

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHI 583
           CG   T A+T  G ++S GS + G LG  G TG  +FP  +  ++    +  ++CG  H 
Sbjct: 289 CGGYHTCAVTDRGDLYSWGSNENGCLGL-GGTGMVRFPEVVSSSLFKLPVSKVSCGWKHT 347

Query: 584 AVVSSKSEVYTWGKG------------ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
           AV+S + ++YTWG G            + GQLGHG++ +   P +VE  ++ +   V CG
Sbjct: 348 AVISGE-DIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYCEPMMVELHKNARAVHVSCG 406

Query: 632 SNFTAAI 638
            N T AI
Sbjct: 407 FNHTGAI 413



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 147/335 (43%), Gaps = 36/335 (10%)

Query: 320 WGEGSGGKLGHGVEADVSYPK---LIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           WG G  G+LG G       P       A        ++CG  HT  +T  G ++    G+
Sbjct: 36  WGNGDHGRLGLGALESRWSPTACPFFLARPADPPASLSCGGAHTLFLTEGGRVFA--TGL 93

Query: 377 HNLGLLGQVSEISHWI-PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
           ++ G LG  S + H + P +VSG  E  ++  I  G  H+ A+T+ G+LF +G  + G L
Sbjct: 94  NDFGQLGIGSSMPHTLDPVEVSGFHE--KVVQISAGNHHSCAVTADGELFVWGKNSSGQL 151

Query: 436 GHGDRSS--TSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           G G  +    S PR+V+ L +++  M + G  H+  + E              +  +WG 
Sbjct: 152 GLGKSAGKVVSTPRKVDYLADVRVKMTALGSEHSIVVTE------------DGEALSWGA 199

Query: 494 GAEGQLGHGDAEP---------RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
              G+LGHG                P  +K  D I   ++A G   +  +   G VF  G
Sbjct: 200 AGGGRLGHGHKSSFLGFAMTSNEYTPRLIKNLDGIKIKRIAAGMLHSACIDEKGTVFIFG 259

Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
                 LG      + P+ +E   + ++ E++ACG YH   V+ + ++Y+WG   NG LG
Sbjct: 260 QKTEKVLGRSNDAPR-PSVVE---EIQFSEEVACGGYHTCAVTDRGDLYSWGSNENGCLG 315

Query: 605 HGDNENKQTPTLV-EALRDKQVKSVVCGSNFTAAI 638
            G     + P +V  +L    V  V CG   TA I
Sbjct: 316 LGGTGMVRFPEVVSSSLFKLPVSKVSCGWKHTAVI 350



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 146/309 (47%), Gaps = 30/309 (9%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +S+ +  SC    DG  ++F+WG+     L  G   G  +S+  + D L    ++ T   
Sbjct: 124 ISAGNHHSCAVTADG--ELFVWGKNSSGQLGLGKSAGKVVSTPRKVDYLADVRVKMT--- 178

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG---------VEADVSYPKLIDALNG 347
                A GS+H+++VT+ G+  SWG   GG+LGHG         + ++   P+LI  L+G
Sbjct: 179 -----ALGSEHSIVVTEDGEALSWGAAGGGRLGHGHKSSFLGFAMTSNEYTPRLIKNLDG 233

Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS- 406
             I  +A G  H+  +   G ++ +G       +LG+ ++     PR     +E +Q S 
Sbjct: 234 IKIKRIAAGMLHSACIDEKGTVFIFGQKTEK--VLGRSND----APRP--SVVEEIQFSE 285

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV-ETLKELKTVMASCGVW 465
            + CG +HT A+T  G L+++G    G LG G       P  V  +L +L     SCG  
Sbjct: 286 EVACGGYHTCAVTDRGDLYSWGSNENGCLGLGGTGMVRFPEVVSSSLFKLPVSKVSCGWK 345

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
           HTA I      T G  G ++   F  G  + GQLGHG+      P+ V++  +     V+
Sbjct: 346 HTAVISGEDIYTWGWGG-ANGTFFEEGHSSGGQLGHGNDVDYCEPMMVELHKNARAVHVS 404

Query: 526 CGHSITIAL 534
           CG + T A+
Sbjct: 405 CGFNHTGAI 413


>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 353

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 155/297 (52%), Gaps = 38/297 (12%)

Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ---ISSIC 409
           ++CG+ H+  +T SG LYT+G   ++ G LG    + H  P    G ++ L+   ++ + 
Sbjct: 41  ISCGDEHSAIITESGRLYTFGS--NDWGQLG----LGHMKPTTKPGCVKSLKQEGVNLVA 94

Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA 469
           CG  HT   T AG+L++FG G+ G LG GD    + P+ +  L E K  + S G  H+AA
Sbjct: 95  CGRSHTIVCTKAGRLYSFGAGSDGQLGTGDAQCATSPQLIN-LPEQKYKLLSAGTDHSAA 153

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHS 529
           +      T G+       L+ WG G+EGQLG G+ +    P  +K    +S+  V+CG+ 
Sbjct: 154 LT-----TDGT-------LYMWGSGSEGQLGLGNTDSVETPKELKFHSSVSW--VSCGYY 199

Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDI-------ACGSYH 582
            T  +T  G++++ G  ++G+LG          ++E     +++E I       ACG  H
Sbjct: 200 HTAIVTDDGKLYTFGEKEFGKLGLT------EDQLEDTTTPKHVESITEKIKLVACGGAH 253

Query: 583 IAVVSSKSEVYTWGKGANGQLGHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAAI 638
            AV+S    +YT+G G +GQLG+G +  + + P  V  L + + K V CG N TA I
Sbjct: 254 TAVISDVGNLYTFGDGMHGQLGNGPSLLQLSLPQKVARLSEHKCKYVSCGDNHTAVI 310



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 164/312 (52%), Gaps = 26/312 (8%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
           A  I+CG +H+ ++T+ G+++++G    G+LG G     + P  + +L    +++VACG 
Sbjct: 38  AMHISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACGR 97

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
            HT   T +G LY++G G  + G LG         P+ ++   +  ++ S   G  H+AA
Sbjct: 98  SHTIVCTKAGRLYSFGAG--SDGQLGTGDAQCATSPQLINLPEQKYKLLS--AGTDHSAA 153

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +T+ G L+ +G G+ G LG G+  S   P+E++    +  V  SCG +HTA + +     
Sbjct: 154 LTTDGTLYMWGSGSEGQLGLGNTDSVETPKELKFHSSVSWV--SCGYYHTAIVTD----- 206

Query: 478 SGSNGLSSKKLFTWGDGAEGQLG--HGDAEPRVVPLCVK-VSDDISFCKVACGHSITIAL 534
                    KL+T+G+   G+LG      E    P  V+ +++ I    VACG + T  +
Sbjct: 207 -------DGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESITEKIKL--VACGGAHTAVI 257

Query: 535 TATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
           +  G +++ G   +GQLG+  S  +   P ++    +H+  + ++CG  H AV++ K  +
Sbjct: 258 SDVGNLYTFGDGMHGQLGNGPSLLQLSLPQKVARLSEHK-CKYVSCGDNHTAVITEKGAM 316

Query: 593 YTWGKGANGQLG 604
           YT+G G +G+LG
Sbjct: 317 YTFGDGRHGKLG 328



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 104/224 (46%), Gaps = 27/224 (12%)

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A I   G +FTFG   F         + ++P +   ++  K +  SCG  H+A I E   
Sbjct: 7   ADIPETGAIFTFGKSRF---------ADNLPSKF-WIRNDKAMHISCGDEHSAIITE--- 53

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
                    S +L+T+G    GQLG G  +P   P CVK         VACG S TI  T
Sbjct: 54  ---------SGRLYTFGSNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACGRSHTIVCT 104

Query: 536 ATGQVFSMGSADYGQLGS-PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
             G+++S G+   GQLG+        P  I  N+  +  + ++ G+ H A +++   +Y 
Sbjct: 105 KAGRLYSFGAGSDGQLGTGDAQCATSPQLI--NLPEQKYKLLSAGTDHSAALTTDGTLYM 162

Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           WG G+ GQLG G+ ++ +TP   E      V  V CG   TA +
Sbjct: 163 WGSGSEGQLGLGNTDSVETPK--ELKFHSSVSWVSCGYYHTAIV 204



 Score = 45.1 bits (105), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 11/107 (10%)

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           TG +F+ G + +            P++    I++     I+CG  H A+++    +YT+G
Sbjct: 12  TGAIFTFGKSRFAD--------NLPSKFW--IRNDKAMHISCGDEHSAIITESGRLYTFG 61

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
               GQLG G  +    P  V++L+ + V  V CG + T  +C   G
Sbjct: 62  SNDWGQLGLGHMKPTTKPGCVKSLKQEGVNLVACGRSHT-IVCTKAG 107


>gi|403333599|gb|EJY65911.1| hypothetical protein OXYTRI_13931 [Oxytricha trifallax]
          Length = 1207

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 200/442 (45%), Gaps = 48/442 (10%)

Query: 212 ASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWG-EGLGNGLLGGA 270
           + G ++    R  +  + RI+   A+++SS  S  +  D   +VF WG +  G   LG  
Sbjct: 23  SEGAINRQAERDRSHSARRIANHDALNTSSNKSQVQGGD-YTEVFSWGSDKFGQLGLGKQ 81

Query: 271 VNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG- 329
           +      S+ ++  ++P+     + +    ++CG+ H+V +T    I+S G    G+LG 
Sbjct: 82  I------SSQKQFHMVPRFCSYNIPIT--QVSCGTSHSVFITSSQLIYSMGSNLQGQLGI 133

Query: 330 -HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI 388
                   S P L++ L       ++CG  HT A+   G++Y+WG   +  G  G  +  
Sbjct: 134 DDPYTQQKSSPVLVELLVNHKPIQISCGNNHTLALMRDGEVYSWGSNEN--GQCGSGASP 191

Query: 389 SH----WIPRKVSGQMEGLQ---ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS 441
            H    W P+ V  + +  Q   I  I  G +H+  +   G+LF  G G  G LG+    
Sbjct: 192 FHTVVQWAPKIV--KFDDYQRPFIKQIDSGAFHSGFVDEIGRLFMCGKGDQGQLGNMSYQ 249

Query: 442 STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH 501
               P  +  + E K    +CG  HT  +          NG    +++T G  + GQLG 
Sbjct: 250 DELSPFYISKIPE-KIQEVACGDDHTVVLTR--------NG----EIYTMGSNSRGQLGT 296

Query: 502 GDAEPR--VVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK 559
           G +  R   VP+ ++  + I   ++  G   + +L+   Q++  G   +G+  +P     
Sbjct: 297 GPSSSRGSNVPVLLQELNFIRMTRIRAGQ-FSASLSVDNQLYLWGCGTFGEFFTPH---- 351

Query: 560 FPTRIEGNIKHRYIEDIACG-SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
              R++  +++  + D   G S  + V++ +  VYTWG    GQLG  D+  + TP  VE
Sbjct: 352 ---RVKS-VQNLELADFQLGKSGFLTVLTRQGSVYTWGINDMGQLGLRDSIQRSTPHRVE 407

Query: 619 ALRDKQVKSVVCGSNFTAAICL 640
           AL  K+V  + CG ++  A+ L
Sbjct: 408 ALDGKRVTQITCGRDYVIALGL 429



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 119/291 (40%), Gaps = 44/291 (15%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY----PKLI 342
           P ++E  V      I+CG+ H + + + G+++SWG    G+ G G     +     PK++
Sbjct: 144 PVLVELLVNHKPIQISCGNNHTLALMRDGEVYSWGSNENGQCGSGASPFHTVVQWAPKIV 203

Query: 343 --DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM 400
             D      I  +  G FH+  V   G L+  G G  + G LG +S      P  +S   
Sbjct: 204 KFDDYQRPFIKQIDSGAFHSGFVDEIGRLFMCGKG--DQGQLGNMSYQDELSPFYISKIP 261

Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSS--TSVPREVETLKELKTV 458
           E +Q   + CG  HT  +T  G+++T G  + G LG G  SS  ++VP  ++ L  ++  
Sbjct: 262 EKIQ--EVACGDDHTVVLTRNGEIYTMGSNSRGQLGTGPSSSRGSNVPVLLQELNFIRMT 319

Query: 459 MASCG-------------VW--------------HTAAIVEVAGKTSGSNGL-----SSK 486
               G             +W               +   +E+A    G +G         
Sbjct: 320 RIRAGQFSASLSVDNQLYLWGCGTFGEFFTPHRVKSVQNLELADFQLGKSGFLTVLTRQG 379

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
            ++TWG    GQLG  D+  R  P  V+  D     ++ CG    IAL  T
Sbjct: 380 SVYTWGINDMGQLGLRDSIQRSTPHRVEALDGKRVTQITCGRDYVIALGLT 430


>gi|428164001|gb|EKX33045.1| hypothetical protein GUITHDRAFT_148202 [Guillardia theta CCMP2712]
          Length = 371

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/280 (33%), Positives = 142/280 (50%), Gaps = 30/280 (10%)

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
           SG L  + + ++  GLLG    +    P+KV+  +EG  ++ +  G  H AAI   G +F
Sbjct: 46  SGRLRRFLERMYCWGLLGLGETLDVLYPQKVN--LEG--VTCVSAGHRHAAAIVGGGDVF 101

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            +G G  G LG G   S   P+ +     +K +  SCG  H+  I E             
Sbjct: 102 VWGRGFSGQLGLGTNKSHFTPQPLSFPMPVKAL--SCGGSHSLFITE------------D 147

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA-CGHSITIALTATGQVFSMG 544
            +L+  G G EGQLG G  E  + P+ V++ +     K A CG   ++  T +GQVF+ G
Sbjct: 148 GRLYATGRGKEGQLGTGSQESVLSPVEVQMPEGSGRVKAAECGKDFSVIATESGQVFTFG 207

Query: 545 SADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           S DYGQLG     G+F      P  +   +  + +  IA G YH A V+S  ++YTWG G
Sbjct: 208 SDDYGQLG----LGQFARYAMTPKEVA-VLAGKNVRSIAAGDYHAAAVTSDGKLYTWGYG 262

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            +GQLG+G+  +   P LV  L++ +V+SV CG + T A+
Sbjct: 263 RSGQLGNGNTVDVSLPVLVRELQNLRVQSVACGCDHTVAV 302



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 152/294 (51%), Gaps = 34/294 (11%)

Query: 251 GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
           G GDVF+WG G  +G LG   N         +    P+ L  +  +  ++++CG  H++ 
Sbjct: 96  GGGDVFVWGRGF-SGQLGLGTN---------KSHFTPQPL--SFPMPVKALSCGGSHSLF 143

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN-IHMVACGEFHTCAVTLSGDL 369
           +T+ G++++ G G  G+LG G +  V  P  +    GS  +    CG+  +   T SG +
Sbjct: 144 ITEDGRLYATGRGKEGQLGTGSQESVLSPVEVQMPEGSGRVKAAECGKDFSVIATESGQV 203

Query: 370 YTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +T+G D    LGL GQ +  +   P++V+  + G  + SI  G +H AA+TS GKL+T+G
Sbjct: 204 FTFGSDDYGQLGL-GQFARYA-MTPKEVA-VLAGKNVRSIAAGDYHAAAVTSDGKLYTWG 260

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS----GSNGLS 484
            G  G LG+G+    S+P  V  L+ L+    +CG  HT A+++   K       S  L 
Sbjct: 261 YGRSGQLGNGNTVDVSLPVLVRELQNLRVQSVACGCDHTVAVIDRGLKEQLMLISSQVLE 320

Query: 485 SKKLFTWGDGAEGQLGHGD-----AEPRVVPLCVKVSDDISFCKVACGHSITIA 533
           S ++F  G G EGQLG GD     A  R VPL V+        +VACG S T+A
Sbjct: 321 SGEVFVMGRGREGQLGRGDIVESPAVYRSVPLQVQ--------QVACGTSHTLA 366



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 157/341 (46%), Gaps = 48/341 (14%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           +++ WG      LG G   DV YP+ +   N   +  V+ G  H  A+   GD++ WG G
Sbjct: 55  RMYCWG-----LLGLGETLDVLYPQKV---NLEGVTCVSAGHRHAAAIVGGGDVFVWGRG 106

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
               G LG  +  SH+ P+ +S  M    + ++ CG  H+  IT  G+L+  G G  G L
Sbjct: 107 FS--GQLGLGTNKSHFTPQPLSFPMP---VKALSCGGSHSLFITEDGRLYATGRGKEGQL 161

Query: 436 GHGDRSSTSVPREVETLKELKTVMAS-CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG 494
           G G + S   P EV+  +    V A+ CG   +    E            S ++FT+G  
Sbjct: 162 GTGSQESVLSPVEVQMPEGSGRVKAAECGKDFSVIATE------------SGQVFTFGSD 209

Query: 495 AEGQLGHGD-AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS 553
             GQLG G  A   + P  V V    +   +A G     A+T+ G++++ G    GQLG+
Sbjct: 210 DYGQLGLGQFARYAMTPKEVAVLAGKNVRSIAAGDYHAAAVTSDGKLYTWGYGRSGQLGN 269

Query: 554 PGSTG-KFPTRIEGNIKHRYIEDIACGSYH------------IAVVSSK----SEVYTWG 596
             +     P  +   +++  ++ +ACG  H            + ++SS+     EV+  G
Sbjct: 270 GNTVDVSLPVLVR-ELQNLRVQSVACGCDHTVAVIDRGLKEQLMLISSQVLESGEVFVMG 328

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           +G  GQLG GD    ++P +  ++   QV+ V CG++ T A
Sbjct: 329 RGREGQLGRGD--IVESPAVYRSV-PLQVQQVACGTSHTLA 366



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 139/313 (44%), Gaps = 64/313 (20%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD------VSYPKLIDALNGSNIHMVA 354
           ++ G +HA  +   G +F WG G  G+LG G          +S+P  + AL+        
Sbjct: 84  VSAGHRHAAAIVGGGDVFVWGRGFSGQLGLGTNKSHFTPQPLSFPMPVKALS-------- 135

Query: 355 CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
           CG  H+  +T  G LY  G G    G LG  S+ S   P +V       ++ +  CG   
Sbjct: 136 CGGSHSLFITEDGRLYATGRGKE--GQLGTGSQESVLSPVEVQMPEGSGRVKAAECGKDF 193

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSV-PREVETL--KELKTVMASCGVWHTAAIV 471
           +   T +G++FTFG   +G LG G  +  ++ P+EV  L  K ++++ A  G +H AA+ 
Sbjct: 194 SVIATESGQVFTFGSDDYGQLGLGQFARYAMTPKEVAVLAGKNVRSIAA--GDYHAAAVT 251

Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
                       S  KL+TWG G  GQLG+G+     +P+ V+   ++    VACG   T
Sbjct: 252 ------------SDGKLYTWGYGRSGQLGNGNTVDVSLPVLVRELQNLRVQSVACGCDHT 299

Query: 532 IALT----------------ATGQVFSMGSADYGQLG------SPGSTGKFPTRIEGNIK 569
           +A+                  +G+VF MG    GQLG      SP      P +      
Sbjct: 300 VAVIDRGLKEQLMLISSQVLESGEVFVMGRGREGQLGRGDIVESPAVYRSVPLQ------ 353

Query: 570 HRYIEDIACGSYH 582
              ++ +ACG+ H
Sbjct: 354 ---VQQVACGTSH 363


>gi|158257096|dbj|BAF84521.1| unnamed protein product [Homo sapiens]
          Length = 815

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 176/358 (49%), Gaps = 38/358 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H+ +VT   +++ +G  + G+LG G ++ VS P  + AL    + + ACG  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99

Query: 361 CAVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
              T  G++Y T G+    LG LG   E + +    +S      +I  +  G   +AA+T
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG-LGDTEERNTF--HVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G+LF +GD + G +G  + S+  VP++V   K +  +  SCG +H+A +      T G
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVT-----TDG 209

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
                  +L+ +G+   G+LG  +      R   L  ++ + +   +VACG   T+ LT 
Sbjct: 210 -------ELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV--IQVACGGEHTVVLTE 260

Query: 537 TGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
              V++ G   +GQLG     G F      P  IE NI+ + I  I+CG  H A+++   
Sbjct: 261 NA-VYTFGLGQFGQLG----LGTFLFETSEPKVIE-NIRDQTISYISCGENHTALITDIG 314

Query: 591 EVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCGS-NFTAAICLHKGVS 645
            +YT+G G +G+LG G  +  N   PTL        VK V CG  +       H+GV+
Sbjct: 315 LMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAPHRGVA 372



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDA 344
           PKV+E+        I+CG  H  L+T  G ++++G+G  GKLG G+E   ++  P L   
Sbjct: 286 PKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSN 345

Query: 345 LNGSNIHMVACGEFH 359
                + +VACG  H
Sbjct: 346 FLRFIVKLVACGGCH 360


>gi|392343043|ref|XP_003754780.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
           norvegicus]
          Length = 1035

 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 169/351 (48%), Gaps = 53/351 (15%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H  +VT   +++ +G  + G+LG G ++ +S P  I AL    + + ACG  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137

Query: 361 CAVTLSGDLYTWGDGIHNLGLLG--------QVSEISHWIPRKVSGQMEGLQISSICCGP 412
              T +G +Y  G   +N G LG           +I  + P  +        I  +  G 
Sbjct: 138 LVSTDTGGVYAAGG--NNEGQLGLGDTDDRDTFHQIGFFTPSDI--------IKQLSAGA 187

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
             +AA+T  GKLF +GD + G +G  ++S+  +P EV   K +  +  SCG +H+A +  
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT- 244

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-------AEPRVVPLCVKVSDDISFCKVA 525
               T G       +L+T+G+   G+LG  +       +  RV+ +  KV       +VA
Sbjct: 245 ----TDG-------ELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKV------IQVA 287

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT---RIEGNIKHRYIEDIACGSYH 582
           CG   T+ LT    V++ G   +GQLG    T  F T   +I   IK + I  I+CG  H
Sbjct: 288 CGGGHTVVLTEK-VVYAFGLGQFGQLGL--GTFLFETSEPKIIDRIKDQKISHISCGENH 344

Query: 583 IAVVSSKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
            A+++    +YT+G G +G+LG G  +  N+  PTL        V+ + CG
Sbjct: 345 TALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACG 395



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 20/218 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F+WG+           +  +I   ++ +  +P   E TV      I+CG  H+  VT
Sbjct: 197 GKLFMWGDN----------SEGQIGLKNKSNVCIPH--EVTVGKPISWISCGYYHSAFVT 244

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
             G+++++GE   GKLG   +  +++  P+ +  +    I  VACG  HT  +T   +  
Sbjct: 245 TDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKVIQ-VACGGGHTVVLT---EKV 300

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +  G+   G LG  + +      K+  +++  +IS I CG  HTA +T  G ++TFGDG
Sbjct: 301 VYAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALMTDIGLMYTFGDG 360

Query: 431 TFGALGHGDRSSTS--VPREVETLKELKTVMASCGVWH 466
             G LG G  + T+   P       +    + +CG  H
Sbjct: 361 RHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGCH 398



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 14/157 (8%)

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG G  GQ    +   RV P        I F         ++ +  TG VF+ G   + +
Sbjct: 7   WGTGGLGQYLRPN---RVAPAVFPKQAQIPFAAFGMAEPESL-VPDTGAVFTFGKTKFAE 62

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
                     P++     K+     ++CG  H A+V+  +++Y +G    GQLG G    
Sbjct: 63  --------NIPSKFW--FKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSA 112

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
              PT ++AL+ ++VK   CG N T       GV  A
Sbjct: 113 ISKPTCIKALKPEKVKLAACGRNHTLVSTDTGGVYAA 149


>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
           trifallax]
          Length = 685

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 144/291 (49%), Gaps = 11/291 (3%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           +F +G+ S G+LG G   + S P  +   +  N+  +A G  H   +T +GD+ T G   
Sbjct: 41  VFVFGQNSYGELGLGDVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVG--F 98

Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC--GPWHTAAITSAGKLFTFGDGTFGA 434
           +  G LG  +  S   P+K+   ++ ++I+ I    G  + A I+  GKL+T G   +G 
Sbjct: 99  NGSGQLGHGNNKSISTPKKIES-LKNIRITHISSANGCENLAIISQDGKLYTCGYNNYGQ 157

Query: 435 LGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG 494
           LGHG +S+ S P  V+ LK+ +    SC  +H+  + +   + S         +++ G  
Sbjct: 158 LGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQ----QTTVYSVGRN 213

Query: 495 AEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSP 554
             GQLG       + P  ++  +     + ACG   ++ +T  G+VFS G  D GQLG  
Sbjct: 214 DNGQLGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFVTVHGEVFSCGFNDNGQLGHN 273

Query: 555 GSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
            +  +  P  IE ++K+++I   ACG YH  V     E+Y +G+   GQLG
Sbjct: 274 DTKSRNQPVLIE-SLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLG 323



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 105/438 (23%), Positives = 187/438 (42%), Gaps = 83/438 (18%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           E+   D ++  +P  +     ++   IA G++H  ++T+ G + + G    G+LGHG   
Sbjct: 51  ELGLGDVQERSIPSQVRFFDEMNVTQIAAGNEHIAVLTRNGDVLTVGFNGSGQLGHGNNK 110

Query: 335 DVSYPKLIDALNGSNIHMV--ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI 392
            +S PK I++L    I  +  A G  +   ++  G LYT G   +N G LG  ++ +   
Sbjct: 111 SISTPKKIESLKNIRITHISSANGCENLAIISQDGKLYTCG--YNNYGQLGHGTQSNLST 168

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGK--------LFTFGDGTFGALGHGDRSSTS 444
           P  V   ++  Q++++ C  +H+  +T   +        +++ G    G LG        
Sbjct: 169 PTLVQA-LKDTQVTNVSCSYYHSLIVTQDMRQASNQQTTVYSVGRNDNGQLGQEHTCHEI 227

Query: 445 VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA 504
            P+ + +L   + +  +CG+ H +  V V G+           +F+ G    GQLGH D 
Sbjct: 228 TPKIIRSLNTRQVIQTACGLHH-SVFVTVHGE-----------VFSCGFNDNGQLGHNDT 275

Query: 505 EPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG--SPGSTGKFPT 562
           + R  P+ ++   +    + ACG+  T+    TG++++ G  D GQLG  + G     P 
Sbjct: 276 KSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIYAFGRNDKGQLGIETNGQALIQPK 335

Query: 563 RIE-----GNIKH---------------------------------------------RY 572
           +I+      NI+H                                             +Y
Sbjct: 336 QIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGESGAIMQGLAESNNLNNQQPQVQY 395

Query: 573 ------IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVK 626
                 I  IACG YH   +    +++T+G+G +GQLG G+ E+++ P  V +L DK+V 
Sbjct: 396 LSKKVNISKIACGCYHSIALCESGQLFTFGRGNHGQLGQGNTEDQKLPKQVASLHDKKVI 455

Query: 627 SVVCGSNFTAAICLHKGV 644
            +  G   T  +   K V
Sbjct: 456 GIAGGFYHTIVLVKQKKV 473


>gi|299116182|emb|CBN74531.1| similar to retinitis pigmentosa GTPase regulator [Ectocarpus
           siliculosus]
          Length = 983

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 157/355 (44%), Gaps = 53/355 (14%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
            P  + + + L    + CG KH V + K G + SWG G  G+LGHG  A   +P+L+  L
Sbjct: 84  FPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRL 143

Query: 346 N----GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQ------VSEISHWIPRK 395
           +    G  +  VACG +H+   T +G ++TWG   +  G  G       V E S     +
Sbjct: 144 DPQRLGERVVQVACGGYHSAVATDAGRVFTWG--FNRYGQCGNGSKDNTVPEPSLVDLSR 201

Query: 396 VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSST-SVPREVETLKE 454
           V+    G ++  + CG  H+A +T  G L+T+G  +FG LG  D   T  +P+EV    +
Sbjct: 202 VTPGAVG-EVPKVLCGRHHSALVTRGGALYTWGACSFGKLGLQDAEKTVCIPQEVTFFSD 260

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
              V A+ G +H  A+               +++F+WG GAEGQ GHG      +P  V 
Sbjct: 261 KPLVQAAAGDFHMVALSR------------KREVFSWGYGAEGQGGHGSLLHMRMPRRVS 308

Query: 515 VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG----------SPGSTG------ 558
              ++   +V CG   ++A+T  G  ++ GSAD G  G           PG +       
Sbjct: 309 SLQEVPVAQVVCGPWWSMAITVDGYCYAWGSADGGWTGLTRPPGLRVVDPGPSADRAVET 368

Query: 559 ---------KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
                      P  +     ++ ++ + CG  H  VV +K        G NGQ G
Sbjct: 369 QSFDSTHNVHVPALVYSLAPYKVLQ-VGCGGGHTLVV-AKRRARPVSPGTNGQPG 421



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 136/306 (44%), Gaps = 36/306 (11%)

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
           G +    A G  H+   T  G L+ WG    ++          H  P  V  Q+  L   
Sbjct: 49  GDSPAFAAAGANHSILRTSEGKLFRWGVEDGDV----------HPFPTGVCTQIP-LPCI 97

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK----TVMASC 462
            +CCG  HT A+   G + ++G G FG LGHGD +S   PR +  L   +     V  +C
Sbjct: 98  EVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVAC 157

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-----AEPRVVPLCVKVSD 517
           G +H+A   +              ++FTWG    GQ G+G       EP +V L      
Sbjct: 158 GGYHSAVATDAG------------RVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVTPG 205

Query: 518 DIS-FCKVACGHSITIALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIE 574
            +    KV CG   +  +T  G +++ G+  +G+LG      T   P  +      + + 
Sbjct: 206 AVGEVPKVLCGRHHSALVTRGGALYTWGACSFGKLGLQDAEKTVCIPQEVT-FFSDKPLV 264

Query: 575 DIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNF 634
             A G +H+  +S K EV++WG GA GQ GHG   + + P  V +L++  V  VVCG  +
Sbjct: 265 QAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWW 324

Query: 635 TAAICL 640
           + AI +
Sbjct: 325 SMAITV 330



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 109/257 (42%), Gaps = 34/257 (13%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG        G   NG + ++      +    +    V +   + CG  H+ LVT
Sbjct: 169 GRVFTWG----FNRYGQCGNGSKDNTVPEPSLVDLSRVTPGAVGEVPKVLCGRHHSALVT 224

Query: 313 KQGQIFSWGEGSGGKLG-HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           + G +++WG  S GKLG    E  V  P+ +   +   +   A G+FH  A++   ++++
Sbjct: 225 RGGALYTWGACSFGKLGLQDAEKTVCIPQEVTFFSDKPLVQAAAGDFHMVALSRKREVFS 284

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG G    G  G  S +   +PR+VS   E + ++ + CGPW + AIT  G  + +G   
Sbjct: 285 WGYGAEGQG--GHGSLLHMRMPRRVSSLQE-VPVAQVVCGPWWSMAITVDGYCYAWGSAD 341

Query: 432 FGALG--------------HGDRS----------STSVPREVETLKELKTVMASCGVWHT 467
            G  G                DR+          +  VP  V +L   K +   CG  HT
Sbjct: 342 GGWTGLTRPPGLRVVDPGPSADRAVETQSFDSTHNVHVPALVYSLAPYKVLQVGCGGGHT 401

Query: 468 AAIVEVAGK--TSGSNG 482
             + +   +  + G+NG
Sbjct: 402 LVVAKRRARPVSPGTNG 418


>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
           member 6 [Xenopus laevis]
 gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
          Length = 1028

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 176/358 (49%), Gaps = 35/358 (9%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            Q ++ G KH++ + K G + S G+   G+LG   + + S  + I +L    I  V+CG 
Sbjct: 36  VQKVSIGEKHSLYLLKDGTLLSCGQNPYGQLGR--KGNNSRIEQISSLEAQTIVDVSCGT 93

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
            H+ A+   G++Y+WGDG       G+ S   ++ P++++G +   +I  I CG +H+ A
Sbjct: 94  NHSVAMCDEGNIYSWGDGSEGQLGTGKFSS-KNFTPKRITGLLNR-KIIQISCGNFHSVA 151

Query: 418 ITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           +   G++F++G    G LG G +  + + P+ V++LK +  V  + G   T A+      
Sbjct: 152 LAEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFAL-----S 206

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGH-GDAEPRVV-PLCVKVSDDISFCKVACGHSITIAL 534
            SG+       +F WG    GQLG   DA+     P  V    D+    ++CG   T  L
Sbjct: 207 MSGT-------VFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTAVL 259

Query: 535 TATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEV 592
              G V++ G   YGQLG   G+    P +IE     R +  +ACG YH +  V + + +
Sbjct: 260 NKDGIVYTFGDDTYGQLGQQSGNQTSVPQKIEE--YSRQVSQVACGRYHTLLYVFTCNRI 317

Query: 593 YTWGKGANGQLGHGDN----ENKQTP------TLVEA--LRDKQVKSVVCGSNFTAAI 638
            ++GKG+  Q G+ ++    E  Q P      +LV A  L+D  VK +  G+N   A+
Sbjct: 318 VSFGKGSQRQQGNDESSDQAEASQLPSAFDISSLVPANDLKDVNVKWIFAGNNVGFAV 375



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 143/322 (44%), Gaps = 26/322 (8%)

Query: 317 IFSWGEGSGGKLG-HGVEADVSYPKLIDALNG-SNIHMVACGEFHTCAVTLSGDLYTWGD 374
           ++ WG+   G+L     E +V + K  D      ++  V+ GE H+  +   G L + G 
Sbjct: 1   MYCWGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSCGQ 60

Query: 375 GIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
             +  LG  G  S I           +E   I  + CG  H+ A+   G ++++GDG+ G
Sbjct: 61  NPYGQLGRKGNNSRIEQ------ISSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEG 114

Query: 434 ALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            LG G  SS +  P+ +  L   K +  SCG +H+ A+ E              ++F+WG
Sbjct: 115 QLGTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALAE------------DGRVFSWG 162

Query: 493 DGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
               GQLG G     +  P  VK    I   +V  G S T AL+ +G VF+ G  + GQL
Sbjct: 163 QNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFAWGRNNAGQL 222

Query: 552 G--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           G  +    G F      +++   +  I+CG  H AV++    VYT+G    GQLG     
Sbjct: 223 GFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLGQQSGN 282

Query: 610 NKQTPTLVEALRDKQVKSVVCG 631
               P  +E    +QV  V CG
Sbjct: 283 QTSVPQKIEE-YSRQVSQVACG 303



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 140/278 (50%), Gaps = 24/278 (8%)

Query: 290 LESTVVLDAQSI---ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDAL 345
           +E    L+AQ+I   +CG+ H+V +  +G I+SWG+GS G+LG G  +  ++ PK I  L
Sbjct: 75  IEQISSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRITGL 134

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
               I  ++CG FH+ A+   G +++WG   +  G LG  S+I +    ++   ++G+ +
Sbjct: 135 LNRKIIQISCGNFHSVALAEDGRVFSWGQ--NKCGQLGLGSQIINQATPQLVKSLKGIPL 192

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGD--RSSTSVPREVETLKELKTVMASCG 463
             +  G   T A++ +G +F +G    G LG  +  +  T  P  V++L++L     SCG
Sbjct: 193 VQVTAGGSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCG 252

Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV-KVSDDISFC 522
             HTA +          +G+    ++T+GD   GQLG        VP  + + S  +S  
Sbjct: 253 EEHTAVL--------NKDGI----VYTFGDDTYGQLGQQSGNQTSVPQKIEEYSRQVS-- 298

Query: 523 KVACGHSITIALTAT-GQVFSMGSADYGQLGSPGSTGK 559
           +VACG   T+    T  ++ S G     Q G+  S+ +
Sbjct: 299 QVACGRYHTLLYVFTCNRIVSFGKGSQRQQGNDESSDQ 336



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 149/302 (49%), Gaps = 39/302 (12%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+++ WG+G   G LG      + SS +     +  +L   ++     I+CG+ H+V + 
Sbjct: 103 GNIYSWGDG-SEGQLGTG----KFSSKNFTPKRITGLLNRKII----QISCGNFHSVALA 153

Query: 313 KQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           + G++FSWG+   G+LG G +  + + P+L+ +L G  +  V  G   T A+++SG ++ 
Sbjct: 154 EDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSMSGTVFA 213

Query: 372 WGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
           WG   +N G LG  ++     + P  V   +  L ++ I CG  HTA +   G ++TFGD
Sbjct: 214 WGR--NNAGQLGFKNDAKKGTFKPYAVDS-LRDLGVAYISCGEEHTAVLNKDGIVYTFGD 270

Query: 430 GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
            T+G LG    + TSVP+++E     +    +CG +HT   V            +  ++ 
Sbjct: 271 DTYGQLGQQSGNQTSVPQKIEEYSR-QVSQVACGRYHTLLYV-----------FTCNRIV 318

Query: 490 TWGDGAEGQLGHGD----AEPRVVPLCVKVSD--------DISFCKVACGHSITIALTAT 537
           ++G G++ Q G+ +    AE   +P    +S         D++   +  G+++  A++ +
Sbjct: 319 SFGKGSQRQQGNDESSDQAEASQLPSAFDISSLVPANDLKDVNVKWIFAGNNVGFAVSFS 378

Query: 538 GQ 539
            Q
Sbjct: 379 QQ 380



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 13/158 (8%)

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI----SFCKVACGHSITIALTATGQVFSM 543
           ++ WGD   GQL   + E  VV    K +D      S  KV+ G   ++ L   G + S 
Sbjct: 1   MYCWGDNCFGQLAVLEEEKEVVHF--KENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSC 58

Query: 544 GSADYGQLGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           G   YGQLG  G+     +RIE   +++ + I D++CG+ H   +  +  +Y+WG G+ G
Sbjct: 59  GQNPYGQLGRKGNN----SRIEQISSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEG 114

Query: 602 QLGHGDNENKQ-TPTLVEALRDKQVKSVVCGSNFTAAI 638
           QLG G   +K  TP  +  L ++++  + CG+  + A+
Sbjct: 115 QLGTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVAL 152



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 28/226 (12%)

Query: 424 LFTFGDGTFGALGHGDRSSTSVP-REVETLKELKTVM-ASCGVWHTAAIVEVAGKTSGSN 481
           ++ +GD  FG L   +     V  +E +  ++ ++V   S G  H+  +           
Sbjct: 1   MYCWGDNCFGQLAVLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYL----------- 49

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
            L    L + G    GQLG      R+  +    +  I    V+CG + ++A+   G ++
Sbjct: 50  -LKDGTLLSCGQNPYGQLGRKGNNSRIEQISSLEAQTI--VDVSCGTNHSVAMCDEGNIY 106

Query: 542 SMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
           S G    GQLG    TGKF      P RI G +  + I+ I+CG++H   ++    V++W
Sbjct: 107 SWGDGSEGQLG----TGKFSSKNFTPKRITGLLNRKIIQ-ISCGNFHSVALAEDGRVFSW 161

Query: 596 GKGANGQLGHGDN-ENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
           G+   GQLG G    N+ TP LV++L+   +  V  G + T A+ +
Sbjct: 162 GQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQTFALSM 207


>gi|62898714|dbj|BAD97211.1| retinitis pigmentosa GTPase regulator variant [Homo sapiens]
          Length = 815

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 176/358 (49%), Gaps = 38/358 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H+ +VT   +++ +G  + G+LG G ++ +S P  + AL    + + ACG  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 361 CAVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
              T  G++Y T G+    LG LG   E + +    +S      +I  +  G   +AA+T
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG-LGDTEERNTF--HVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G+LF +GD + G +G  + S+  VP++V   K +  +  SCG +H+A +      T G
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVT-----TDG 209

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
                  +L+ +G+   G+LG  +      R   L  ++ + +   +VACG   T+ LT 
Sbjct: 210 -------ELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV--IQVACGGEHTVVLTE 260

Query: 537 TGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
              V++ G   +GQLG     G F      P  IE NI+ + I  I+CG  H A+++   
Sbjct: 261 NA-VYTFGLGQFGQLG----LGTFLFETSEPKVIE-NIRDQTISYISCGENHTALITDIG 314

Query: 591 EVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCGS-NFTAAICLHKGVS 645
            +YT+G G +G+LG G  +  N   PTL        VK V CG  +       H+GV+
Sbjct: 315 LMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAPHRGVA 372



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDA 344
           PKV+E+        I+CG  H  L+T  G ++++G+G  GKLG G+E   ++  P L   
Sbjct: 286 PKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSN 345

Query: 345 LNGSNIHMVACGEFH 359
                + +VACG  H
Sbjct: 346 FLRFIVKLVACGGCH 360


>gi|300798276|ref|NP_001179573.1| probable E3 ubiquitin-protein ligase HERC6 [Bos taurus]
          Length = 1016

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 172/349 (49%), Gaps = 34/349 (9%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G  H++L+   G + S G+ S G+LG         P+ I AL   N+ +V+CG+ H+ 
Sbjct: 29  ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSL 88

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV   G ++ WG        +G+  E + +IP+K+   + G++I  + CG +H+ A++  
Sbjct: 89  AVCHKGRVFAWGAASEGQLGIGEFKETT-FIPKKIK-TLAGIKIIQVACGHYHSVALSED 146

Query: 422 GKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           G++F++G  + G LG G +  S + P+ V +L+ +     + G  H+ A+       SG+
Sbjct: 147 GQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL-----SLSGT 201

Query: 481 NGLSSKKLFTWGDGAEGQLG-HGDAEP--RVVPLCVKVSDDISFCKVACGHSITIALTAT 537
           +       F WG  + GQL   G+  P  R  P+ +     +    ++CG+  T  LT  
Sbjct: 202 S-------FGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQD 254

Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPT---RIEGNIKHRYIEDIACGSYH-IAVVSSKSEV 592
           G+VF+ G   YGQLG  P +  + P    RIEG      +  I CGS H +A + +  +V
Sbjct: 255 GKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEG-----LVSQIDCGSDHTLAYIYTTGQV 309

Query: 593 YTWGKGAN--GQLGHGDNENKQTPTLVEA--LRDKQVKSVVCGS--NFT 635
            ++G+G     +  H   E+     LV A  L D QVK +  G+  NF 
Sbjct: 310 VSFGRGPGCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGTYANFV 358



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 128/258 (49%), Gaps = 18/258 (6%)

Query: 222 RSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADR 281
           R    ++  ++L S     S   CH+     G VF WG     G LG            +
Sbjct: 68  RIPALETLNVALVSCGKEHSLAVCHK-----GRVFAWGAA-SEGQLG--------IGEFK 113

Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPK 340
               +PK +++   +    +ACG  H+V +++ GQ+FSWG  S G+LG G E    + P+
Sbjct: 114 ETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQ 173

Query: 341 LIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQ 399
            + +L G  +  VA G  H+ A++LSG  + WG +    L L G  + +  + P  + G 
Sbjct: 174 RVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSI-GA 232

Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
           ++ L + SI CG  HTA +T  GK+FTFGD ++G LGH   +    P+ VE ++ L + +
Sbjct: 233 LKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQI 292

Query: 460 ASCGVWHTAAIVEVAGKT 477
             CG  HT A +   G+ 
Sbjct: 293 -DCGSDHTLAYIYTTGQV 309



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 136/265 (51%), Gaps = 24/265 (9%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDAL 345
           P+ + +   L+   ++CG +H++ V  +G++F+WG  S G+LG G   + ++ PK I  L
Sbjct: 66  PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGLQ 404
            G  I  VACG +H+ A++  G +++WG   H  G LG   E  S   P++V   +EG+ 
Sbjct: 126 AGIKIIQVACGHYHSVALSEDGQVFSWGTNSH--GQLGLGKEFPSQASPQRVRS-LEGIP 182

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGAL---GHGDRSSTSVPREVETLKELKTVMAS 461
           ++ +  G  H+ A++ +G  F +G  + G L   G+        P  +  LK L  V  S
Sbjct: 183 LAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSIS 242

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDIS 520
           CG  HTA + +              K+FT+GD + GQLGH   AE R   L  ++   +S
Sbjct: 243 CGYKHTAVLTQ------------DGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVS 290

Query: 521 FCKVACGHSITIA-LTATGQVFSMG 544
             ++ CG   T+A +  TGQV S G
Sbjct: 291 --QIDCGSDHTLAYIYTTGQVVSFG 313


>gi|397488796|ref|XP_003815430.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Pan
           paniscus]
          Length = 815

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 176/358 (49%), Gaps = 38/358 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H+ +VT   +++ +G  + G+LG G ++ VS P  + AL    + + ACG  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99

Query: 361 CAVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
              T  G++Y T G+    LG LG   E + +    +S      +I  +  G   +AA+T
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG-LGDTEERNTF--HVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G+LF +GD + G +G  + S+  VP++V   K +  +  SCG +H+A +      T G
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVT-----TDG 209

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
                  +L+ +G+   G+LG  +      R   L  ++ + +   +VACG   T+ LT 
Sbjct: 210 -------ELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV--IQVACGGEHTVVLTE 260

Query: 537 TGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
              V++ G   +GQLG     G F      P  IE NI+ + I  I+CG  H A+++   
Sbjct: 261 NA-VYTFGLGQFGQLG----LGTFLFETSEPKVIE-NIRDQTISYISCGENHTALITDIG 314

Query: 591 EVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCGS-NFTAAICLHKGVS 645
            +YT+G G +G+LG G  +  N   PTL        VK V CG  +       H+GV+
Sbjct: 315 LMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVIFAAPHRGVA 372



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDA 344
           PKV+E+        I+CG  H  L+T  G ++++G+G  GKLG G+E   ++  P L   
Sbjct: 286 PKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSN 345

Query: 345 LNGSNIHMVACGEFH 359
                + +VACG  H
Sbjct: 346 FLRFIVKLVACGGCH 360


>gi|4506581|ref|NP_000319.1| X-linked retinitis pigmentosa GTPase regulator isoform A [Homo
           sapiens]
 gi|1314871|gb|AAC50481.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
 gi|2204218|emb|CAA66258.1| XLRP3 [Homo sapiens]
 gi|119579845|gb|EAW59441.1| retinitis pigmentosa GTPase regulator, isoform CRA_a [Homo sapiens]
          Length = 815

 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 176/358 (49%), Gaps = 38/358 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H+ +VT   +++ +G  + G+LG G ++ +S P  + AL    + + ACG  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 361 CAVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
              T  G++Y T G+    LG LG   E + +    +S      +I  +  G   +AA+T
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG-LGDTEERNTF--HVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G+LF +GD + G +G  + S+  VP++V   K +  +  SCG +H+A +      T G
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVT-----TDG 209

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
                  +L+ +G+   G+LG  +      R   L  ++ + +   +VACG   T+ LT 
Sbjct: 210 -------ELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV--IQVACGGEHTVVLTE 260

Query: 537 TGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
              V++ G   +GQLG     G F      P  IE NI+ + I  I+CG  H A+++   
Sbjct: 261 NA-VYTFGLGQFGQLG----LGTFLFETSEPKVIE-NIRDQTISYISCGENHTALITDIG 314

Query: 591 EVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCGS-NFTAAICLHKGVS 645
            +YT+G G +G+LG G  +  N   PTL        VK V CG  +       H+GV+
Sbjct: 315 LMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAPHRGVA 372



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDA 344
           PKV+E+        I+CG  H  L+T  G ++++G+G  GKLG G+E   ++  P L   
Sbjct: 286 PKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSN 345

Query: 345 LNGSNIHMVACGEFH 359
                + +VACG  H
Sbjct: 346 FLRFIVKLVACGGCH 360


>gi|296486676|tpg|DAA28789.1| TPA: hect domain and RLD 6-like isoform 2 [Bos taurus]
          Length = 1016

 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 172/349 (49%), Gaps = 34/349 (9%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G  H++L+   G + S G+ S G+LG         P+ I AL   N+ +V+CG+ H+ 
Sbjct: 29  ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSL 88

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV   G ++ WG        +G+  E + +IP+K+   + G++I  + CG +H+ A++  
Sbjct: 89  AVCHKGRVFAWGAASEGQLGIGEFKETT-FIPKKIK-TLAGIKIIQVACGHYHSVALSED 146

Query: 422 GKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           G++F++G  + G LG G +  S + P+ V +L+ +     + G  H+ A+       SG+
Sbjct: 147 GQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL-----SLSGT 201

Query: 481 NGLSSKKLFTWGDGAEGQLG-HGDAEP--RVVPLCVKVSDDISFCKVACGHSITIALTAT 537
           +       F WG  + GQL   G+  P  R  P+ +     +    ++CG+  T  LT  
Sbjct: 202 S-------FGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQD 254

Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPT---RIEGNIKHRYIEDIACGSYH-IAVVSSKSEV 592
           G+VF+ G   YGQLG  P +  + P    RIEG      +  I CGS H +A + +  +V
Sbjct: 255 GKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEG-----LVSQIDCGSDHTLAYIYTTGQV 309

Query: 593 YTWGKGAN--GQLGHGDNENKQTPTLVEA--LRDKQVKSVVCGS--NFT 635
            ++G+G     +  H   E+     LV A  L D QVK +  G+  NF 
Sbjct: 310 VSFGRGPGCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGTYANFV 358



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 128/258 (49%), Gaps = 18/258 (6%)

Query: 222 RSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADR 281
           R    ++  ++L S     S   CH+     G VF WG     G LG            +
Sbjct: 68  RIPALETLNVALVSCGKEHSLAVCHK-----GRVFAWGAA-SEGQLG--------IGEFK 113

Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPK 340
               +PK +++   +    +ACG  H+V +++ GQ+FSWG  S G+LG G E    + P+
Sbjct: 114 ETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQ 173

Query: 341 LIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQ 399
            + +L G  +  VA G  H+ A++LSG  + WG +    L L G  + +  + P  + G 
Sbjct: 174 RVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSI-GA 232

Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
           ++ L + SI CG  HTA +T  GK+FTFGD ++G LGH   +    P+ VE ++ L + +
Sbjct: 233 LKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQI 292

Query: 460 ASCGVWHTAAIVEVAGKT 477
             CG  HT A +   G+ 
Sbjct: 293 -DCGSDHTLAYIYTTGQV 309



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 136/265 (51%), Gaps = 24/265 (9%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDAL 345
           P+ + +   L+   ++CG +H++ V  +G++F+WG  S G+LG G   + ++ PK I  L
Sbjct: 66  PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGLQ 404
            G  I  VACG +H+ A++  G +++WG   H  G LG   E  S   P++V   +EG+ 
Sbjct: 126 AGIKIIQVACGHYHSVALSEDGQVFSWGTNSH--GQLGLGKEFPSQASPQRVRS-LEGIP 182

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGAL---GHGDRSSTSVPREVETLKELKTVMAS 461
           ++ +  G  H+ A++ +G  F +G  + G L   G+        P  +  LK L  V  S
Sbjct: 183 LAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSIS 242

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDIS 520
           CG  HTA + +              K+FT+GD + GQLGH   AE R   L  ++   +S
Sbjct: 243 CGYKHTAVLTQ------------DGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVS 290

Query: 521 FCKVACGHSITIA-LTATGQVFSMG 544
             ++ CG   T+A +  TGQV S G
Sbjct: 291 --QIDCGSDHTLAYIYTTGQVVSFG 313


>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
           trifallax]
          Length = 546

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 151/289 (52%), Gaps = 24/289 (8%)

Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAV 363
           G +H + +T  G++FS+G    G+LGHG +  ++ PK ++AL+   +  V C  +HT   
Sbjct: 74  GCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQVEALSRKFVTAVGCSYYHT-IF 132

Query: 364 TLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGK 423
           + + ++  +  G ++ G LG  +      P  +   + G +I SI CG +H+   +  G+
Sbjct: 133 SCADEMEIYSCGRNDYGQLGLGNLDDKNSPTLIEA-LNGKRIVSIGCGQYHSVVSSIDGE 191

Query: 424 LFTFGDGTFGALG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           +F+FG    G LG  G   + S+P+EV   K LK+   +CG +HT AI         +NG
Sbjct: 192 IFSFGRNDSGQLGITGSDGNISLPKEV---KNLKSTQIACGYYHTVAI---------NNG 239

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPR-VVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
               +L++WG    GQLG G    + ++P  V+  +D     VACG   T+AL   GQ+F
Sbjct: 240 ----QLYSWGKNDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTLALGYAGQLF 295

Query: 542 SMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSS 588
           S G   +GQLG  G+T     P  I+G I  +  + IA G YH  V+++
Sbjct: 296 SFGRNSHGQLGD-GTTNNSCKPLLIQGLIDKKVCQ-IAAGFYHSIVLAN 342



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 93/301 (30%), Positives = 143/301 (47%), Gaps = 25/301 (8%)

Query: 349 NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR--------KVSGQM 400
           N+  VA G  HT  +T  GD+Y+ G       L    + +S             K+  ++
Sbjct: 2   NVIQVAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEKL 61

Query: 401 EGLQISSICC--GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV 458
            G  I  I    G  H  A+T+ GK+F+FG    G LGHGD++S + P++VE L      
Sbjct: 62  RGKNIVKIFASNGCEHVIALTNNGKVFSFGFNVKGQLGHGDQTSINSPKQVEALSRKFVT 121

Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
              C  +HT  I   A +          ++++ G    GQLG G+ + +  P  ++  + 
Sbjct: 122 AVGCSYYHT--IFSCADEM---------EIYSCGRNDYGQLGLGNLDDKNSPTLIEALNG 170

Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIAC 578
                + CG   ++  +  G++FS G  D GQLG  GS G      E  +K+     IAC
Sbjct: 171 KRIVSIGCGQYHSVVSSIDGEIFSFGRNDSGQLGITGSDGNISLPKE--VKNLKSTQIAC 228

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAA 637
           G YH   +++  ++Y+WGK  +GQLG G    K+  PTLV  L D+++ SV CG   T A
Sbjct: 229 GYYHTVAINN-GQLYSWGKNDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTLA 287

Query: 638 I 638
           +
Sbjct: 288 L 288



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 174/362 (48%), Gaps = 39/362 (10%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGS-GGKLGHGVEA----------DVSYPKLIDA 344
           ++   +A G++H +++T  G ++S G    G  L  G  A               KL++ 
Sbjct: 1   MNVIQVAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEK 60

Query: 345 LNGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
           L G NI  +    G  H  A+T +G ++++G  +   G LG   + S   P++V      
Sbjct: 61  LRGKNIVKIFASNGCEHVIALTNNGKVFSFGFNVK--GQLGHGDQTSINSPKQVEALSRK 118

Query: 403 LQISSICCGPWHTA-AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
             ++++ C  +HT  +     ++++ G   +G LG G+    + P  +E L   + V   
Sbjct: 119 F-VTAVGCSYYHTIFSCADEMEIYSCGRNDYGQLGLGNLDDKNSPTLIEALNGKRIVSIG 177

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDIS 520
           CG +H+          S  +G    ++F++G    GQLG   ++  + +P  VK   ++ 
Sbjct: 178 CGQYHSV--------VSSIDG----EIFSFGRNDSGQLGITGSDGNISLPKEVK---NLK 222

Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIAC 578
             ++ACG+  T+A+   GQ++S G  D GQLG    + K   PT +  +++ + I  +AC
Sbjct: 223 STQIACGYYHTVAIN-NGQLYSWGKNDSGQLGIGIYSAKEILPTLVR-DLEDQEIVSVAC 280

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G YH   +    +++++G+ ++GQLG G   N   P L++ L DK+V  +  G  F  +I
Sbjct: 281 GCYHTLALGYAGQLFSFGRNSHGQLGDGTTNNSCKPLLIQGLIDKKVCQIAAG--FYHSI 338

Query: 639 CL 640
            L
Sbjct: 339 VL 340


>gi|340503755|gb|EGR30283.1| hypothetical protein IMG5_135970 [Ichthyophthirius multifiliis]
          Length = 361

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 160/340 (47%), Gaps = 39/340 (11%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM--VACGEF 358
           I+CG+   + +T+   +FSWG+ S G LG G       P+L+  L+  NI +  ++CG++
Sbjct: 28  ISCGTNFCLALTQDFLVFSWGDNSYGNLGLGHLESSHLPQLVRFLDNDNIKIQHISCGQY 87

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
           H+ A + +G ++TWG G  N G LG+ +  +   P  V G +EG  I +  CG +H    
Sbjct: 88  HSAATSKTGQVFTWGLG--NFGQLGKGNLANFNQPDLVRGDLEGKNILATVCGGYHNVCF 145

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREV----ETLKELKTVMASCGVWHTAAIVEVA 474
           T+ G  +++G      +   +  S+++P  +    E +KE               I  +A
Sbjct: 146 TNEGYTYSWG---CLEVDQQNIKSSNIPYPMMLNSEFIKEENNPF-------NMIITYIA 195

Query: 475 GKTSGSNGLSSKK-LFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITI 532
                   +  K+ ++ WG   EGQLG G     V  P  V+  D      +ACG   ++
Sbjct: 196 AGADYCMAIEQKRIIYAWGRNKEGQLGIGGISNFVDQPSKVQGLDGNLMKSIACGEEHSL 255

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
            LT +G++F+ GS+  G+LG         T  E NIK + ++ IACGS H   ++   EV
Sbjct: 256 FLTESGRIFACGSSKDGKLGLGIRNTILMTPQEINIKAKVVK-IACGSTHSMALAINKEV 314

Query: 593 ------------------YTWGKGANGQLGHGDNENKQTP 614
                             YTWG G   +LGHGD +N  TP
Sbjct: 315 EQNQDEYEYLEAKETKVIYTWGNGWESKLGHGDKDNLDTP 354



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 104/242 (42%), Gaps = 23/242 (9%)

Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL--KELKTV 458
           + + I  I CG     A+T    +F++GD ++G LG G   S+ +P+ V  L    +K  
Sbjct: 21  QNIGIIQISCGTNFCLALTQDFLVFSWGDNSYGNLGLGHLESSHLPQLVRFLDNDNIKIQ 80

Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS-D 517
             SCG +H+AA  +              ++FTWG G  GQLG G+      P  V+   +
Sbjct: 81  HISCGQYHSAATSKTG------------QVFTWGLGNFGQLGKGNLANFNQPDLVRGDLE 128

Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRI-------EGNIKH 570
             +     CG    +  T  G  +S G  +  Q     S   +P  +       E N  +
Sbjct: 129 GKNILATVCGGYHNVCFTNEGYTYSWGCLEVDQQNIKSSNIPYPMMLNSEFIKEENNPFN 188

Query: 571 RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN-KQTPTLVEALRDKQVKSVV 629
             I  IA G+ +   +  K  +Y WG+   GQLG G   N    P+ V+ L    +KS+ 
Sbjct: 189 MIITYIAAGADYCMAIEQKRIIYAWGRNKEGQLGIGGISNFVDQPSKVQGLDGNLMKSIA 248

Query: 630 CG 631
           CG
Sbjct: 249 CG 250



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 62/124 (50%), Gaps = 9/124 (7%)

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRI----EGNI 568
           ++  +I   +++CG +  +ALT    VFS G   YG LG     +   P  +      NI
Sbjct: 18  ELEQNIGIIQISCGTNFCLALTQDFLVFSWGDNSYGNLGLGHLESSHLPQLVRFLDNDNI 77

Query: 569 KHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA-LRDKQVKS 627
           K   I+ I+CG YH A  S   +V+TWG G  GQLG G+  N   P LV   L  K + +
Sbjct: 78  K---IQHISCGQYHSAATSKTGQVFTWGLGNFGQLGKGNLANFNQPDLVRGDLEGKNILA 134

Query: 628 VVCG 631
            VCG
Sbjct: 135 TVCG 138



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 29/170 (17%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           IA G+ + + + ++  I++WG    G+LG  G+   V  P  +  L+G+ +  +ACGE H
Sbjct: 194 IAAGADYCMAIEQKRIIYAWGRNKEGQLGIGGISNFVDQPSKVQGLDGNLMKSIACGEEH 253

Query: 360 TCAVTLSGDLYTWG---DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
           +  +T SG ++  G   DG   LG+   +      I  K        ++  I CG  H+ 
Sbjct: 254 SLFLTESGRIFACGSSKDGKLGLGIRNTILMTPQEINIKA-------KVVKIACGSTHSM 306

Query: 417 AIT------------------SAGKLFTFGDGTFGALGHGDRSSTSVPRE 448
           A+                       ++T+G+G    LGHGD+ +   P++
Sbjct: 307 ALAINKEVEQNQDEYEYLEAKETKVIYTWGNGWESKLGHGDKDNLDTPQK 356


>gi|296486675|tpg|DAA28788.1| TPA: hect domain and RLD 6-like isoform 1 [Bos taurus]
          Length = 980

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 172/349 (49%), Gaps = 34/349 (9%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G  H++L+   G + S G+ S G+LG         P+ I AL   N+ +V+CG+ H+ 
Sbjct: 29  ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLNVALVSCGKEHSL 88

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV   G ++ WG        +G+  E + +IP+K+   + G++I  + CG +H+ A++  
Sbjct: 89  AVCHKGRVFAWGAASEGQLGIGEFKETT-FIPKKIK-TLAGIKIIQVACGHYHSVALSED 146

Query: 422 GKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           G++F++G  + G LG G +  S + P+ V +L+ +     + G  H+ A+       SG+
Sbjct: 147 GQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL-----SLSGT 201

Query: 481 NGLSSKKLFTWGDGAEGQLG-HGDAEP--RVVPLCVKVSDDISFCKVACGHSITIALTAT 537
           +       F WG  + GQL   G+  P  R  P+ +     +    ++CG+  T  LT  
Sbjct: 202 S-------FGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQD 254

Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPT---RIEGNIKHRYIEDIACGSYH-IAVVSSKSEV 592
           G+VF+ G   YGQLG  P +  + P    RIEG      +  I CGS H +A + +  +V
Sbjct: 255 GKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEG-----LVSQIDCGSDHTLAYIYTTGQV 309

Query: 593 YTWGKGAN--GQLGHGDNENKQTPTLVEA--LRDKQVKSVVCGS--NFT 635
            ++G+G     +  H   E+     LV A  L D QVK +  G+  NF 
Sbjct: 310 VSFGRGPGCASRSPHPGAESSDISCLVSAKDLADVQVKHIFAGTYANFV 358



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 128/258 (49%), Gaps = 18/258 (6%)

Query: 222 RSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADR 281
           R    ++  ++L S     S   CH+     G VF WG     G LG            +
Sbjct: 68  RIPALETLNVALVSCGKEHSLAVCHK-----GRVFAWGAA-SEGQLG--------IGEFK 113

Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPK 340
               +PK +++   +    +ACG  H+V +++ GQ+FSWG  S G+LG G E    + P+
Sbjct: 114 ETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQ 173

Query: 341 LIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQ 399
            + +L G  +  VA G  H+ A++LSG  + WG +    L L G  + +  + P  + G 
Sbjct: 174 RVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSI-GA 232

Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
           ++ L + SI CG  HTA +T  GK+FTFGD ++G LGH   +    P+ VE ++ L + +
Sbjct: 233 LKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQI 292

Query: 460 ASCGVWHTAAIVEVAGKT 477
             CG  HT A +   G+ 
Sbjct: 293 -DCGSDHTLAYIYTTGQV 309



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 136/265 (51%), Gaps = 24/265 (9%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDAL 345
           P+ + +   L+   ++CG +H++ V  +G++F+WG  S G+LG G   + ++ PK I  L
Sbjct: 66  PERIPALETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGLQ 404
            G  I  VACG +H+ A++  G +++WG   H  G LG   E  S   P++V   +EG+ 
Sbjct: 126 AGIKIIQVACGHYHSVALSEDGQVFSWGTNSH--GQLGLGKEFPSQASPQRVRS-LEGIP 182

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGAL---GHGDRSSTSVPREVETLKELKTVMAS 461
           ++ +  G  H+ A++ +G  F +G  + G L   G+        P  +  LK L  V  S
Sbjct: 183 LAQVAAGGHHSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSIS 242

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDIS 520
           CG  HTA + +              K+FT+GD + GQLGH   AE R   L  ++   +S
Sbjct: 243 CGYKHTAVLTQ------------DGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVS 290

Query: 521 FCKVACGHSITIA-LTATGQVFSMG 544
             ++ CG   T+A +  TGQV S G
Sbjct: 291 --QIDCGSDHTLAYIYTTGQVVSFG 313


>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
          Length = 393

 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 190/420 (45%), Gaps = 69/420 (16%)

Query: 262 LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWG 321
            GNG  G   + +E +S +     LP+V+ + + +  +++ACG  H   V   G +++WG
Sbjct: 8   FGNGDCGRLGHSLEYASEE-----LPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWG 62

Query: 322 EGSGGKLGH-------GVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG- 373
               G+LGH       G+  +V+ P+ + AL+         G +HT  V  SG ++++G 
Sbjct: 63  LNDKGQLGHDSEDSEVGLPGEVAMPERVVALS--------AGYYHTLCVGESGSVWSFGC 114

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
           +G   LGL   V  +    PR V   ++  ++ ++  G  H+ A+T+ G+++++G+   G
Sbjct: 115 NGKGQLGLGKDVVLVRE--PRLVK-SLQDNKVVAVAAGMEHSLALTAGGEVYSWGNAANG 171

Query: 434 ALGHGD--------RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            LGHG          S   +PR V   + L+    S G  H+AA V  AG          
Sbjct: 172 RLGHGSATPRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAA-VSTAGDA-------- 222

Query: 486 KKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
              F WG G   QLG G  E    P V+P         S   VACG   ++AL   G V 
Sbjct: 223 ---FLWGYGKFHQLGFGSDEDLAGPTVLPPLKG-----STAAVACGSLHSLALQYGGHVL 274

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG----- 596
           + G+   G LG      + P R    +     E IA G  H A V+   ++YTWG     
Sbjct: 275 AWGTNQNGVLGQGHEKQQQPKRPS-KVPGVSAEQIAAGWKHSAAVTGSGKLYTWGWGGSQ 333

Query: 597 ---------KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC-LHKGVSI 646
                     G  GQLGHG++ +  +P  V+ L   +   V CG N TAAI  L  GVS+
Sbjct: 334 GTALSFEGRTGTGGQLGHGNDFDYWSPHHVDWLSLTETDLVACGMNHTAAIVELDSGVSL 393



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 158/333 (47%), Gaps = 30/333 (9%)

Query: 317 IFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           + ++G G  G+LGH +E A    P+++ AL G  +  VACG  HT AV  SG +YTW  G
Sbjct: 5   LATFGNGDCGRLGHSLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTW--G 62

Query: 376 IHNLGLLGQVSEISH-WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
           +++ G LG  SE S   +P +V+      ++ ++  G +HT  +  +G +++FG    G 
Sbjct: 63  LNDKGQLGHDSEDSEVGLPGEVAMPE---RVVALSAGYYHTLCVGESGSVWSFGCNGKGQ 119

Query: 435 LGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG G D      PR V++L++ K V  + G+ H+ A+             +  ++++WG+
Sbjct: 120 LGLGKDVVLVREPRLVKSLQDNKVVAVAAGMEHSLALT------------AGGEVYSWGN 167

Query: 494 GAEGQLGHGDAEPR--------VVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
            A G+LGHG A PR         +P  V+  + +   +V+ G   + A++  G  F  G 
Sbjct: 168 AANGRLGHGSATPRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMHSAAVSTAGDAFLWGY 227

Query: 546 ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
             + QLG           +   +K      +ACGS H   +     V  WG   NG LG 
Sbjct: 228 GKFHQLGFGSDEDLAGPTVLPPLKGS-TAAVACGSLHSLALQYGGHVLAWGTNQNGVLGQ 286

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G +E +Q P     +     + +  G   +AA+
Sbjct: 287 G-HEKQQQPKRPSKVPGVSAEQIAAGWKHSAAV 318



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 118/240 (49%), Gaps = 31/240 (12%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRR-----DALLPKVLESTVVLDAQSIACGSKH 307
           G+V+ WG    NG LG        S+  RR        LP+++ +   L  + ++ G  H
Sbjct: 160 GEVYSWGNA-ANGRLG------HGSATPRRLFGSSIEFLPRLVRAFEALRVEQVSAGQMH 212

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
           +  V+  G  F WG G   +LG G + D++ P ++  L GS    VACG  H+ A+   G
Sbjct: 213 SAAVSTAGDAFLWGYGKFHQLGFGSDEDLAGPTVLPPLKGSTA-AVACGSLHSLALQYGG 271

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            +  W  G +  G+LGQ  E     P++ S ++ G+    I  G  H+AA+T +GKL+T+
Sbjct: 272 HVLAW--GTNQNGVLGQGHEKQQ-QPKRPS-KVPGVSAEQIAAGWKHSAAVTGSGKLYTW 327

Query: 428 G--------------DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           G               GT G LGHG+      P  V+ L   +T + +CG+ HTAAIVE+
Sbjct: 328 GWGGSQGTALSFEGRTGTGGQLGHGNDFDYWSPHHVDWLSLTETDLVACGMNHTAAIVEL 387


>gi|302803630|ref|XP_002983568.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
 gi|300148811|gb|EFJ15469.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
          Length = 413

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 201/410 (49%), Gaps = 58/410 (14%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           V +WG G   G LG + +G +       + +L + LES    +  S++CG  H +++T +
Sbjct: 30  VALWGNG-DQGRLGLSESGSQF------EPVLCRALESH---EPCSVSCGGAHTLILTDK 79

Query: 315 GQIFSWGEGSGGKLGHGVEADVSY-PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           G++F+ G  S G+LG  ++++ S+ P  +       +H +A G +H+ A+T SG+ Y WG
Sbjct: 80  GRVFATGLNSSGQLGVPLKSESSFDPVEVHGFPDPCVH-IAAGRYHSAAITSSGETYVWG 138

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
                   LG+ ++  +  P+K+   + G+++ ++  G  H+  +   G++ ++G   FG
Sbjct: 139 RNSEGQLGLGKRAKSVYITPQKME-SLAGMRLKALALGTDHSLGLAETGQVLSWGTNRFG 197

Query: 434 ALGHGDR---------SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
            LGHG+          ++   PR +  L++L+    S G+ H+A   +            
Sbjct: 198 CLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQVRSVSAGLVHSACADD------------ 245

Query: 485 SKKLFTWGDGAEGQLGHGD----AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
           S  ++++G G+  QLG G+    ++P  +P   +VS       ++CG   T A+T  G +
Sbjct: 246 SGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLPRVS------SISCGGYHTGAITQDGDI 299

Query: 541 FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
           ++ GS ++G LGS       P R+E ++   ++ +I+CG  H A + S   +++WG G +
Sbjct: 300 YTWGSNEHGCLGSGFRASSKPLRLE-SLAEAFMSEISCGWKHTAAI-SDGYIFSWGWGGS 357

Query: 601 ------------GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
                       GQLG G + +   P  +E         V CG N TAAI
Sbjct: 358 YGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAI 407



 Score =  102 bits (254), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 89/304 (29%), Positives = 140/304 (46%), Gaps = 50/304 (16%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+ ++WG     G LG       +    +   + P+ +ES   +  +++A G+ H++ + 
Sbjct: 132 GETYVWGRN-SEGQLG-------LGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLA 183

Query: 313 KQGQIFSWGEGSGGKLGHG---------VEADVSYPKLIDALNGSNIHMVACGEFHTCAV 363
           + GQ+ SWG    G LGHG          + +   P++I  L    +  V+ G  H+   
Sbjct: 184 ETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQVRSVSAGLVHSACA 243

Query: 364 TLSGDLYTWGDG-IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
             SG +Y++G G +  LGL G  ++ S   P       +  ++SSI CG +HT AIT  G
Sbjct: 244 DDSGTIYSFGQGSMCQLGL-GNNNDASQPCPIP-----DLPRVSSISCGGYHTGAITQDG 297

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            ++T+G    G LG G R+S S P  +E+L E      SCG  HTAAI            
Sbjct: 298 DIYTWGSNEHGCLGSGFRAS-SKPLRLESLAEAFMSEISCGWKHTAAI------------ 344

Query: 483 LSSKKLFTWGDGAE------------GQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
            S   +F+WG G              GQLG G       P+ +++ D +S   V+CG + 
Sbjct: 345 -SDGYIFSWGWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNH 403

Query: 531 TIAL 534
           T A+
Sbjct: 404 TAAI 407



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 106/232 (45%), Gaps = 20/232 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V  WG      L  G + G      D  +   P+++     L  +S++ G  H+    
Sbjct: 186 GQVLSWGTNRFGCLGHGEMTGFFDFFKDTNE-YTPRIIHCLEKLQVRSVSAGLVHSACAD 244

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G I+S+G+GS  +LG G   D S P  I  L    +  ++CG +HT A+T  GD+YTW
Sbjct: 245 DSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDL--PRVSSISCGGYHTGAITQDGDIYTW 302

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---- 428
           G   H  G LG     S   P ++    E   +S I CG  HTAAI S G +F++G    
Sbjct: 303 GSNEH--GCLGSGFRASS-KPLRLESLAEAF-MSEISCGWKHTAAI-SDGYIFSWGWGGS 357

Query: 429 DGTF--------GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
            GT+        G LG G       P  +E    L  +  SCG  HTAAI+E
Sbjct: 358 YGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAILE 409



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 12/172 (6%)

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
           VEV+GK         + +  WG+G +G+LG  ++  +  P+  +  +    C V+CG + 
Sbjct: 19  VEVSGKAG------KRWVALWGNGDQGRLGLSESGSQFEPVLCRALESHEPCSVSCGGAH 72

Query: 531 TIALTATGQVFSMGSADYGQLGSP-GSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSS 588
           T+ LT  G+VF+ G    GQLG P  S   F P  + G         IA G YH A ++S
Sbjct: 73  TLILTDKGRVFATGLNSSGQLGVPLKSESSFDPVEVHGFPDP--CVHIAAGRYHSAAITS 130

Query: 589 KSEVYTWGKGANGQLGHGDNENKQ--TPTLVEALRDKQVKSVVCGSNFTAAI 638
             E Y WG+ + GQLG G        TP  +E+L   ++K++  G++ +  +
Sbjct: 131 SGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGL 182


>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 866

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 140/498 (28%), Positives = 211/498 (42%), Gaps = 78/498 (15%)

Query: 170 LVAYENSPQNRLG-------------KAFSEVLSFTAAAK---AYTRAESVSKSLNFVAS 213
           L A+ N+P  +LG             +  ++V+S +A A+   A T   SV  +    A 
Sbjct: 166 LWAWGNNPSGQLGNGQRTQRNAPTRVRGLNQVVSASAGAEHSVAVTEDGSV-WTWGSNAY 224

Query: 214 GGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNG 273
           G L D  +           +S  V+ ++ GS        G V+ WG           +N 
Sbjct: 225 GQLGDGTNTLRAVPVQVPGMSDVVAVAAAGSRTVALKADGTVWTWG-----------INS 273

Query: 274 V-EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV 332
             E+       +LLP  ++   +    +IA G  H + V K G  +SWG  + G+LG G 
Sbjct: 274 SGELGDGTTTHSLLP--IQVPNLSGVTNIAAGLWHTLAVKKDGSAWSWGNNAYGQLGDGT 331

Query: 333 EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI 392
             +   P L+  L G  +  ++ G  HT A+   G    WG G ++ G LG  +  +  I
Sbjct: 332 TLNRLRPVLVAGLTG--VRALSGGVVHTVALKWDGT--AWGWGYNSAGQLGNGTTTNSSI 387

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
           P +V+   + ++I +   G +HT A    G L+ +GD  +GALG G+ +S+SVP +V  L
Sbjct: 388 PVQVAALTQAVEIDA---GGYHTLARRQDGTLYAWGDNFYGALGTGNTTSSSVPVQVP-L 443

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC 512
             ++        W  A       +    N      LF WG    G+LG G    R  P  
Sbjct: 444 SGVR--------WFGAGYYYSVAERKKVNMAQVHTLFAWGHNTNGELGDGTTTQRTSPTA 495

Query: 513 VKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS------------PGSTGKF 560
           V VS      K A G + ++AL A G V++ G   YGQLG+            PG +G  
Sbjct: 496 VVVS---GIVKTAGGSAHSVALGAGGAVWTWGYNAYGQLGNGTTTQVVTPTQLPGMSG-- 550

Query: 561 PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
                       + D+A G  H   +S+   V  WG  A GQLG+G   N+ TP  V  L
Sbjct: 551 ------------VIDVAAGVNHTVALSADGTVAAWGYNAYGQLGNGTTANQLTPQSVPEL 598

Query: 621 RDKQVKSVVCGSNFTAAI 638
               V ++  GS  T A+
Sbjct: 599 --DGVTAISAGSTHTVAL 614



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 160/325 (49%), Gaps = 27/325 (8%)

Query: 292 STVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH 351
           + VV      A GS H+V +   G +++WG  + G+LG+G    V  P  +  ++G  + 
Sbjct: 495 AVVVSGIVKTAGGSAHSVALGAGGAVWTWGYNAYGQLGNGTTTQVVTPTQLPGMSG--VI 552

Query: 352 MVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCG 411
            VA G  HT A++  G +  WG   +  G LG  +  +   P+ V  +++G  +++I  G
Sbjct: 553 DVAAGVNHTVALSADGTVAAWG--YNAYGQLGNGTTANQLTPQSVP-ELDG--VTAISAG 607

Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIV 471
             HT A+ + G ++ +G   +G LG G  +  S P +V +L+ + ++ A  G +HT A+ 
Sbjct: 608 STHTVALKADGTVWAWGSNLYGQLGDGTFTHRSSPVQVPSLENVVSIAA--GHFHTVAV- 664

Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
               K  G+       L+ WG G +GQLG G    + VP  V+VS       +A G   T
Sbjct: 665 ----KGDGT-------LWVWGYGPQGQLGLGTTTNQSVP--VQVSGLGHAVAIAAGGYHT 711

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           +AL A GQV++ G    GQLG      ++ P  + G      +  +A G Y  AV+    
Sbjct: 712 VALLANGQVWTWGYNSSGQLGDATIIQRYSPVLVPGLTN---VIALAAGGYTTAVLKRDG 768

Query: 591 EVYTWGKGANGQLGHGDNENKQTPT 615
            V+ +G   NGQLG G   ++ +PT
Sbjct: 769 TVWAFGYNPNGQLGDGTTTSRSSPT 793



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 149/322 (46%), Gaps = 30/322 (9%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           +A G  H V ++  G + +WG  + G+LG+G  A+   P+ +  L+G  +  ++ G  HT
Sbjct: 554 VAAGVNHTVALSADGTVAAWGYNAYGQLGNGTTANQLTPQSVPELDG--VTAISAGSTHT 611

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ-ISSICCGPWHTAAIT 419
            A+   G ++ WG  ++  G LG     +H   R    Q+  L+ + SI  G +HT A+ 
Sbjct: 612 VALKADGTVWAWGSNLY--GQLGD-GTFTH---RSSPVQVPSLENVVSIAAGHFHTVAVK 665

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G L+ +G G  G LG G  ++ SVP +V  L     V  + G +HT A+         
Sbjct: 666 GDGTLWVWGYGPQGQLGLGTTTNQSVPVQVSGLGH--AVAIAAGGYHTVAL--------- 714

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
              L++ +++TWG  + GQLG      R  P+ V    ++    +A G   T  L   G 
Sbjct: 715 ---LANGQVWTWGYNSSGQLGDATIIQRYSPVLVPGLTNV--IALAAGGYTTAVLKRDGT 769

Query: 540 VFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           V++ G    GQLG   +T +  PT    N     + D++ G  H+  +   + V   G  
Sbjct: 770 VWAFGYNPNGQLGDGTTTSRSSPTATLMN----SVVDLSSGVNHMMGLRKDAWVRACGYN 825

Query: 599 ANGQLGHGDNENKQTPTLVEAL 620
           + GQLG G    + TP  V  L
Sbjct: 826 SAGQLGDGTTTQRPTPVQVTNL 847



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 157/392 (40%), Gaps = 75/392 (19%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           ++++ G  H V +   G  + WG  S G+LG+G   + S P  + AL  +    +  G +
Sbjct: 348 RALSGGVVHTVALKWDGTAWGWGYNSAGQLGNGTTTNSSIPVQVAAL--TQAVEIDAGGY 405

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA- 417
           HT A    G LY WGD  +  G LG  +  S  +P +V   + G++      G +++ A 
Sbjct: 406 HTLARRQDGTLYAWGDNFY--GALGTGNTTSSSVPVQVP--LSGVRW--FGAGYYYSVAE 459

Query: 418 -----ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC---------G 463
                +     LF +G  T G LG G  +  + P  V     +KT   S           
Sbjct: 460 RKKVNMAQVHTLFAWGHNTNGELGDGTTTQRTSPTAVVVSGIVKTAGGSAHSVALGAGGA 519

Query: 464 VW-------------------------HTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEG 497
           VW                           + +++VA   + +  LS+   +  WG  A G
Sbjct: 520 VWTWGYNAYGQLGNGTTTQVVTPTQLPGMSGVIDVAAGVNHTVALSADGTVAAWGYNAYG 579

Query: 498 QLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGST 557
           QLG+G    ++ P  V   D ++   ++ G + T+AL A G V++ GS  YGQLG     
Sbjct: 580 QLGNGTTANQLTPQSVPELDGVT--AISAGSTHTVALKADGTVWAWGSNLYGQLG----- 632

Query: 558 GKFPTRIEGNIKHRY----------IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
                  +G   HR           +  IA G +H   V     ++ WG G  GQLG G 
Sbjct: 633 -------DGTFTHRSSPVQVPSLENVVSIAAGHFHTVAVKGDGTLWVWGYGPQGQLGLGT 685

Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
             N+  P  V  L      ++  G   T A+ 
Sbjct: 686 TTNQSVPVQVSGL--GHAVAIAAGGYHTVALL 715



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 149/323 (46%), Gaps = 30/323 (9%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           +F+WG  + G+LG G     + P  +     S I   A G  H+ A+   G ++TWG   
Sbjct: 471 LFAWGHNTNGELGDGTTTQRTSPTAVVV---SGIVKTAGGSAHSVALGAGGAVWTWG--Y 525

Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
           +  G LG  +      P ++ G M G  +  +  G  HT A+++ G +  +G   +G LG
Sbjct: 526 NAYGQLGNGTTTQVVTPTQLPG-MSG--VIDVAAGVNHTVALSADGTVAAWGYNAYGQLG 582

Query: 437 HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
           +G  ++   P+ V  L  +  +  S G  HT A+     K  G+       ++ WG    
Sbjct: 583 NGTTANQLTPQSVPELDGVTAI--SAGSTHTVAL-----KADGT-------VWAWGSNLY 628

Query: 497 GQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGS 556
           GQLG G    R  P+ V   +++    +A GH  T+A+   G ++  G    GQLG   +
Sbjct: 629 GQLGDGTFTHRSSPVQVPSLENV--VSIAAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTT 686

Query: 557 TGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPT 615
           T +  P ++ G + H     IA G YH   + +  +V+TWG  ++GQLG      + +P 
Sbjct: 687 TNQSVPVQVSG-LGHAVA--IAAGGYHTVALLANGQVWTWGYNSSGQLGDATIIQRYSPV 743

Query: 616 LVEALRDKQVKSVVCGSNFTAAI 638
           LV  L +  V ++  G   TA +
Sbjct: 744 LVPGLTN--VIALAAGGYTTAVL 764



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 141/319 (44%), Gaps = 27/319 (8%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           S++ G  H + V   G +++WG    G+LG+G     + P  +  LN   +   + G  H
Sbjct: 149 SVSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLN--QVVSASAGAEH 206

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           + AVT  G ++TWG   +  G LG  +     +P +V G  + + +++       T A+ 
Sbjct: 207 SVAVTEDGSVWTWGSNAY--GQLGDGTNTLRAVPVQVPGMSDVVAVAAAGS---RTVALK 261

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
           + G ++T+G  + G LG G  + + +P +V  L  +  + A  G+WHT A+     K  G
Sbjct: 262 ADGTVWTWGINSSGELGDGTTTHSLLPIQVPNLSGVTNIAA--GLWHTLAV-----KKDG 314

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
           S        ++WG+ A GQLG G    R+ P+ V     +        H  T+AL   G 
Sbjct: 315 S-------AWSWGNNAYGQLGDGTTLNRLRPVLVAGLTGVRALSGGVVH--TVALKWDGT 365

Query: 540 VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
            +  G    GQLG+  +T    P ++    +   I+    G YH         +Y WG  
Sbjct: 366 AWGWGYNSAGQLGNGTTTNSSIPVQVAALTQAVEID---AGGYHTLARRQDGTLYAWGDN 422

Query: 599 ANGQLGHGDNENKQTPTLV 617
             G LG G+  +   P  V
Sbjct: 423 FYGALGTGNTTSSSVPVQV 441



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 102/215 (47%), Gaps = 20/215 (9%)

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
           S+  G +HT  + S G L+ +G+   G LG+G R+  + P  V  L ++  V AS G  H
Sbjct: 149 SVSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLNQV--VSASAGAEH 206

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           + A+ E               ++TWG  A GQLG G    R VP+ V    D+    VA 
Sbjct: 207 SVAVTE------------DGSVWTWGSNAYGQLGDGTNTLRAVPVQVPGMSDV--VAVAA 252

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAV 585
             S T+AL A G V++ G    G+LG   +T    P ++  N+    + +IA G +H   
Sbjct: 253 AGSRTVALKADGTVWTWGINSSGELGDGTTTHSLLPIQVP-NLSG--VTNIAAGLWHTLA 309

Query: 586 VSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           V      ++WG  A GQLG G   N+  P LV  L
Sbjct: 310 VKKDGSAWSWGNNAYGQLGDGTTLNRLRPVLVAGL 344



 Score = 39.7 bits (91), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 571 RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
           ++   ++ G YH   V S   ++ WG   +GQLG+G    +  PT V  L   QV S   
Sbjct: 145 QFCPSVSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGL--NQVVSASA 202

Query: 631 GSNFTAAIC 639
           G+  + A+ 
Sbjct: 203 GAEHSVAVT 211


>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
          Length = 1010

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 172/350 (49%), Gaps = 32/350 (9%)

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG 356
           + +  ACG +H++L+   G + S G+ + G+LG   +     P LI AL    + +V+CG
Sbjct: 22  EVRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERPGLIKALETLLVGLVSCG 81

Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI--PRKVSGQMEGLQISSICCGPWH 414
           + H+ AV   G ++ WG G  + G LG + E    I  P+K+   + G++I  + CG +H
Sbjct: 82  KEHSLAVCHKGRVFAWGAG--SEGQLG-IEECKEKIFTPKKIK-TLTGIKIIQVSCGHYH 137

Query: 415 TAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           + A++  G+++++G  + G LG G +  S + P+ V +L+ +     + G  H+ A+   
Sbjct: 138 SLALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL--- 194

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQL---GHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
               SG++       F WG    GQL   G+     R  P  +     +    ++CG+  
Sbjct: 195 --SLSGTS-------FGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEH 245

Query: 531 TIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSS 588
           T  LT  G+VF+ G    GQLG +P +  + P ++EG      +  I CGSYH +A V +
Sbjct: 246 TAVLTQNGKVFTFGDNSCGQLGYNPTAKKRGPQQVEG--IDGLVSQIDCGSYHTLAYVYT 303

Query: 589 KSEVYTWGKGAN----GQLGHGDNENKQTPTLVEA--LRDKQVKSVVCGS 632
             EV ++G+G N            EN     L+ A  L D QVK +  G+
Sbjct: 304 TGEVVSFGRGRNCASSPTHSEAQMENFDMSCLISANDLVDVQVKHIFAGT 353



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 148/302 (49%), Gaps = 21/302 (6%)

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
           G+ +   ACGE H+  +   G +++ GD     G LG+  +     P  +   +E L + 
Sbjct: 20  GAEVRQAACGERHSLLLLSDGTVHSCGDNTQ--GQLGRRGKPREERPGLIKA-LETLLVG 76

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGD-RSSTSVPREVETLKELKTVMASCGVW 465
            + CG  H+ A+   G++F +G G+ G LG  + +     P++++TL  +K +  SCG +
Sbjct: 77  LVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQVSCGHY 136

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP-RVVPLCVKVSDDISFCKV 524
           H+ A+ E              ++++WG  ++GQLG G   P +  P  V+  + I   +V
Sbjct: 137 HSLALSE------------DGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGIPLAQV 184

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGS---TGKFPTRIEGNIKHRYIEDIACGSY 581
           A G + + AL+ +G  F  GS + GQL   G+     ++     G +K   +  I+CG  
Sbjct: 185 AAGGAHSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYE 244

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
           H AV++   +V+T+G  + GQLG+     K+ P  VE + D  V  + CGS  T A    
Sbjct: 245 HTAVLTQNGKVFTFGDNSCGQLGYNPTAKKRGPQQVEGI-DGLVSQIDCGSYHTLAYVYT 303

Query: 642 KG 643
            G
Sbjct: 304 TG 305



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/253 (30%), Positives = 127/253 (50%), Gaps = 18/253 (7%)

Query: 227 DSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALL 286
           ++  + L S     S   CH+     G VF WG G    L      G+E     +     
Sbjct: 71  ETLLVGLVSCGKEHSLAVCHK-----GRVFAWGAGSEGQL------GIE---ECKEKIFT 116

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDAL 345
           PK +++   +    ++CG  H++ +++ GQ++SWG+ S G+LG G E    + P+ + +L
Sbjct: 117 PKKIKTLTGIKIIQVSCGHYHSLALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSL 176

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
            G  +  VA G  H+ A++LSG  + WG +    L L G  + +  + P  + G ++ L 
Sbjct: 177 EGIPLAQVAAGGAHSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSI-GALKSLD 235

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +  I CG  HTA +T  GK+FTFGD + G LG+   +    P++VE +  L + +  CG 
Sbjct: 236 VIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGYNPTAKKRGPQQVEGIDGLVSQI-DCGS 294

Query: 465 WHTAAIVEVAGKT 477
           +HT A V   G+ 
Sbjct: 295 YHTLAYVYTTGEV 307



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 135/264 (51%), Gaps = 22/264 (8%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVEADVSYPKLIDAL 345
           P ++++   L    ++CG +H++ V  +G++F+WG GS G+LG    +  +  PK I  L
Sbjct: 64  PGLIKALETLLVGLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIEECKEKIFTPKKIKTL 123

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGLQ 404
            G  I  V+CG +H+ A++  G +Y+WG   ++ G LG   E  S   P++V   +EG+ 
Sbjct: 124 TGIKIIQVSCGHYHSLALSEDGQVYSWGK--NSQGQLGLGKEFPSQASPQRVRS-LEGIP 180

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGAL---GHGDRSSTSVPREVETLKELKTVMAS 461
           ++ +  G  H+ A++ +G  F +G    G L   G+        P  +  LK L  +  S
Sbjct: 181 LAQVAAGGAHSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYIS 240

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
           CG  HTA + +        NG    K+FT+GD + GQLG+     +  P  V+  D +  
Sbjct: 241 CGYEHTAVLTQ--------NG----KVFTFGDNSCGQLGYNPTAKKRGPQQVEGIDGL-V 287

Query: 522 CKVACGHSITIA-LTATGQVFSMG 544
            ++ CG   T+A +  TG+V S G
Sbjct: 288 SQIDCGSYHTLAYVYTTGEVVSFG 311



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 121/279 (43%), Gaps = 42/279 (15%)

Query: 370 YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
           + WG+G       GQ+        R+V     G ++    CG  H+  + S G + + GD
Sbjct: 3   FCWGNG-------GQL--------RRVPTGAGGAEVRQAACGERHSLLLLSDGTVHSCGD 47

Query: 430 GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
            T G LG   +     P  ++ L+ L   + SCG  H+ A+                ++F
Sbjct: 48  NTQGQLGRRGKPREERPGLIKALETLLVGLVSCGKEHSLAVCH------------KGRVF 95

Query: 490 TWGDGAEGQLGHGDAEPRVV-PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
            WG G+EGQLG  + + ++  P  +K    I   +V+CGH  ++AL+  GQV+S G    
Sbjct: 96  AWGAGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQVSCGHYHSLALSEDGQVYSWGKNSQ 155

Query: 549 GQLGSPGSTGK-FPTRIEGNIKHRYIEDI-----ACGSYHIAVVSSKSEVYTWGKGANGQ 602
           GQLG     GK FP++     + R +E I     A G  H   +S     + WG    GQ
Sbjct: 156 GQLG----LGKEFPSQASPQ-RVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNTGQ 210

Query: 603 LGHGDNE---NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           L    N     +  P  + AL+   V  + CG   TA +
Sbjct: 211 LALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAVL 249



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 51/81 (62%), Gaps = 2/81 (2%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
           LD   I+CG +H  ++T+ G++F++G+ S G+LG+   A    P+ ++ ++G  +  + C
Sbjct: 234 LDVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGYNPTAKKRGPQQVEGIDGL-VSQIDC 292

Query: 356 GEFHTCA-VTLSGDLYTWGDG 375
           G +HT A V  +G++ ++G G
Sbjct: 293 GSYHTLAYVYTTGEVVSFGRG 313



 Score = 43.9 bits (102), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 1/75 (1%)

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
           +   ACG  H  ++ S   V++ G    GQLG      ++ P L++AL    V  V CG 
Sbjct: 23  VRQAACGERHSLLLLSDGTVHSCGDNTQGQLGRRGKPREERPGLIKALETLLVGLVSCGK 82

Query: 633 NFTAAICLHKGVSIA 647
             + A+C HKG   A
Sbjct: 83  EHSLAVC-HKGRVFA 96


>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
 gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
          Length = 477

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 156/346 (45%), Gaps = 19/346 (5%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           E+      D+  P  ++        +IA G  H++ VT  G   +WG    G+LG G   
Sbjct: 84  ELGDGTTTDSSTPIAVDLPAGTTITAIAAGHDHSLAVTSAGTALAWGNNLFGQLGDGSTT 143

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
           D S P  +D   G+ +  +A G+ H+ AVT +G    WGD  ++ G LG  +      P 
Sbjct: 144 DSSTPIAVDLPAGTTVTAIAAGDDHSLAVTSAGTALAWGD--NDRGELGDGTTTRRDTPV 201

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
            V     G  +++I  G  H+ A+TSAG + T+G  + G LG G  + +S P  V+ L  
Sbjct: 202 DVD-LPAGTTVTAIAAGIGHSLALTSAGTVLTWGLNSDGQLGDGTTTDSSTPIAVD-LPA 259

Query: 455 LKTVMA-SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
             TV A + G  H+ A+             ++  +  WG+ ++GQLG G       P+ V
Sbjct: 260 GTTVTAIAAGSLHSLAVT------------TAGTILAWGNNSDGQLGDGTTTNSSTPIAV 307

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIK-HRY 572
            +    +   +  G   ++A+T+ G   + G  D GQLG  G+T    T I  N+     
Sbjct: 308 NLPASTTITAIDGGRDHSLAVTSAGSALAWGDNDDGQLGD-GTTTNSSTPIAVNLPADTT 366

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
           +     GS H   V++   +  WG  ++G+LG G   N  TP  V 
Sbjct: 367 VTATTAGSLHSLAVTTAGTILAWGNNSDGRLGDGTTTNSSTPIAVN 412



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 136/304 (44%), Gaps = 19/304 (6%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           + +WG+   G+LG G   D S P  +D   G+ I  +A G  H+ AVT +G    WG+ +
Sbjct: 74  VLAWGDNKDGELGDGTTTDSSTPIAVDLPAGTTITAIAAGHDHSLAVTSAGTALAWGNNL 133

Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
              G LG  S      P  V     G  +++I  G  H+ A+TSAG    +GD   G LG
Sbjct: 134 --FGQLGDGSTTDSSTPIAVD-LPAGTTVTAIAAGDDHSLAVTSAGTALAWGDNDRGELG 190

Query: 437 HGDRSSTSVPREVETLKELKTVMA-SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGA 495
            G  +    P +V+ L    TV A + G+ H+ A+             S+  + TWG  +
Sbjct: 191 DGTTTRRDTPVDVD-LPAGTTVTAIAAGIGHSLALT------------SAGTVLTWGLNS 237

Query: 496 EGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG 555
           +GQLG G       P+ V +    +   +A G   ++A+T  G + + G+   GQLG  G
Sbjct: 238 DGQLGDGTTTDSSTPIAVDLPAGTTVTAIAAGSLHSLAVTTAGTILAWGNNSDGQLGD-G 296

Query: 556 STGKFPTRIEGNIK-HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
           +T    T I  N+     I  I  G  H   V+S      WG   +GQLG G   N  TP
Sbjct: 297 TTTNSSTPIAVNLPASTTITAIDGGRDHSLAVTSAGSALAWGDNDDGQLGDGTTTNSSTP 356

Query: 615 TLVE 618
             V 
Sbjct: 357 IAVN 360



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 142/325 (43%), Gaps = 34/325 (10%)

Query: 217 DDANSRSSTADSFRISLSSAVSSSSQGSCHE-DFDGLGDVFIWGEG----LGNGLLGGAV 271
           D + + SST  +  +   + V++ + G  H       G    WG+     LG+G      
Sbjct: 139 DGSTTDSSTPIAVDLPAGTTVTAIAAGDDHSLAVTSAGTALAWGDNDRGELGDG------ 192

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG 331
                 +  RRD  +   L +   + A  IA G  H++ +T  G + +WG  S G+LG G
Sbjct: 193 ------TTTRRDTPVDVDLPAGTTVTA--IAAGIGHSLALTSAGTVLTWGLNSDGQLGDG 244

Query: 332 VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHW 391
              D S P  +D   G+ +  +A G  H+ AVT +G +  WG+  ++ G LG  +  +  
Sbjct: 245 TTTDSSTPIAVDLPAGTTVTAIAAGSLHSLAVTTAGTILAWGN--NSDGQLGDGTTTNSS 302

Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
            P  V+       I++I  G  H+ A+TSAG    +GD   G LG G  +++S P  V  
Sbjct: 303 TPIAVN-LPASTTITAIDGGRDHSLAVTSAGSALAWGDNDDGQLGDGTTTNSSTPIAVNL 361

Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPL 511
             +      + G  H+ A+             ++  +  WG+ ++G+LG G       P+
Sbjct: 362 PADTTVTATTAGSLHSLAVT------------TAGTILAWGNNSDGRLGDGTTTNSSTPI 409

Query: 512 CVKVSDDISFCKVACGHSITIALTA 536
            V +  D +      G + ++AL A
Sbjct: 410 AVNLPADTTVTATTAGSAHSMALVA 434



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 2/157 (1%)

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
           +S  +  WGD  +G+LG G       P+ V +    +   +A GH  ++A+T+ G   + 
Sbjct: 70  ASDTVLAWGDNKDGELGDGTTTDSSTPIAVDLPAGTTITAIAAGHDHSLAVTSAGTALAW 129

Query: 544 GSADYGQLGSPGSTGKFPTRIEGNIKH-RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
           G+  +GQLG  GST    T I  ++     +  IA G  H   V+S      WG    G+
Sbjct: 130 GNNLFGQLGD-GSTTDSSTPIAVDLPAGTTVTAIAAGDDHSLAVTSAGTALAWGDNDRGE 188

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
           LG G    + TP  V+      V ++  G   + A+ 
Sbjct: 189 LGDGTTTRRDTPVDVDLPAGTTVTAIAAGIGHSLALT 225


>gi|403352385|gb|EJY75705.1| hypothetical protein OXYTRI_02905 [Oxytricha trifallax]
          Length = 923

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/400 (24%), Positives = 176/400 (44%), Gaps = 77/400 (19%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVE 333
           E++    +DALLP+ +     + A+ I+  + H  ++T+ GQI   G    GKLG    +
Sbjct: 179 ELALGVYKDALLPRFVTGVKGMTAKWISSSNHHTAMITQDGQIVVSGSSLHGKLGIESNK 238

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG--------DGIHNLGLLGQV 385
            +++  +++  L       V+CG++HT  +   G +Y +G        D I+        
Sbjct: 239 TNINKFQIVPTLQRKRAKQVSCGDYHTLVLIEDGTVYQFGGSLFKDKKDKINRP--QNPT 296

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG----TFGALGHGDRS 441
            +I+  +P+ V   + G +I  I CG +H+AA+   G L+T+G G      G  GHG  +
Sbjct: 297 QQIAPNVPQPVQA-LYGREIVQIDCGDFHSAALDGNGDLYTWGGGAPSYNKGQCGHGHNN 355

Query: 442 STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH 501
           +   P +V+ L   + +  +CG +HT A+             S  +L+ +G G  G+ G+
Sbjct: 356 ALEYPEKVKYLSSKRIIKVACGGFHTLALT------------SENELYGFGSGNYGECGN 403

Query: 502 GDAEPRVVPLCVK-----------VSDDI-------------------SFCKVACGHSIT 531
           G+      P  +K           V+DD+                        A G   +
Sbjct: 404 GEFMDTSKPKLIKFPNDHLDTKKNVTDDLEEYGHDEEFVLEMYLKEQPQILDFAAGGRHS 463

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
           + +T  G+++S G    GQLG+                   +   A G  H  +++ + +
Sbjct: 464 LIITNKGRLYSFGYGTNGQLGN-------------------VVQCAAGWNHSMILTERGD 504

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
           V++ G G +GQLGHGD E++   T V++L +K +  +  G
Sbjct: 505 VFSCGYGGHGQLGHGDKESRTQFTFVQSLGNKNISKIFAG 544



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 114/285 (40%), Gaps = 70/285 (24%)

Query: 249 FDGLGDVFIWGEG---LGNGLLG-GAVNGVEISSADRRDALLPKVLESTVVLDAQSIACG 304
            DG GD++ WG G      G  G G  N +E            K L S  ++    +ACG
Sbjct: 328 LDGNGDLYTWGGGAPSYNKGQCGHGHNNALEYPEK-------VKYLSSKRII---KVACG 377

Query: 305 SKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVT 364
             H + +T + +++ +G G+ G+ G+G   D S PKLI      N H+            
Sbjct: 378 GFHTLALTSENELYGFGSGNYGECGNGEFMDTSKPKLIKF---PNDHL-------DTKKN 427

Query: 365 LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
           ++ DL  +G   H+   +     +  ++        E  QI     G  H+  IT+ G+L
Sbjct: 428 VTDDLEEYG---HDEEFV-----LEMYL-------KEQPQILDFAAGGRHSLIITNKGRL 472

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           ++FG GT G LG+                    V+     W+ + I+   G         
Sbjct: 473 YSFGYGTNGQLGN--------------------VVQCAAGWNHSMILTERG--------- 503

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHS 529
              +F+ G G  GQLGHGD E R     V+   + +  K+  G S
Sbjct: 504 --DVFSCGYGGHGQLGHGDKESRTQFTFVQSLGNKNISKIFAGGS 546


>gi|223997658|ref|XP_002288502.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975610|gb|EED93938.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 597

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 173/361 (47%), Gaps = 40/361 (11%)

Query: 299 QSIACGSKHAVL--VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
           Q +   +KH  +  + +QG ++  G+ + G+LG G   D     +I +  G ++H V+  
Sbjct: 90  QELELETKHRRIADLEEQGAVYCAGKNNAGQLGLGDWNDRQCFTVIRSTRGKHVHHVSTS 149

Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVS----EISHWIPRKVSGQMEGLQISSICC 410
            G   + A T    ++ WG     +GLLG  S     +    P+ V  ++ G +I     
Sbjct: 150 NGANISFATTHQHQVFVWGGT--GVGLLGFTSSSKQNVMFETPQLVE-ELNGEEIIKTSI 206

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
           G  H  A++  G LF +G+G+FG LG GD ++   P+ + TL ++            A +
Sbjct: 207 GSSHACAVSKGGDLFVWGNGSFGVLGTGDTNNVDTPKCLNTLDKI------------AVV 254

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV-----PLCVKVSDDISFCKVA 525
             V G+       S  +L+ WG  A G+LG G+ +  V      P+ +  S+ + F  +A
Sbjct: 255 DVVTGEKHACIKTSQHELYAWGHCANGRLGIGNNDEAVFLSSPHPIRMPTSEKVRF--IA 312

Query: 526 CGHSITIALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYH- 582
           CG   T+A T++  VFS GS D G+LG  S  S    PT I   +K  ++ D+  G++H 
Sbjct: 313 CGAEHTLACTSS-TVFSWGSGDGGRLGHGSDCSDRWEPTEIVA-LKGSHVLDLGAGTWHS 370

Query: 583 -----IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
                I ++     +YTWG G  GQLG G      TP LV  L D  V +V CGS+  AA
Sbjct: 371 ACVIAIPLMKDSGWLYTWGSGYQGQLGQGTVCKSSTPALVTGLCDAFVSAVFCGSSHNAA 430

Query: 638 I 638
           I
Sbjct: 431 I 431



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 146/305 (47%), Gaps = 26/305 (8%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALL--PKVLESTVVLDAQSIACGSKHAVLVT 312
           VF+WG G G GLLG        +S+ +++ +   P+++E     +    + GS HA  V+
Sbjct: 164 VFVWG-GTGVGLLG-------FTSSSKQNVMFETPQLVEELNGEEIIKTSIGSSHACAVS 215

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           K G +F WG GS G LG G   +V  PK ++ L+   +  V  GE H C  T   +LY W
Sbjct: 216 KGGDLFVWGNGSFGVLGTGDTNNVDTPKCLNTLDKIAVVDVVTGEKHACIKTSQHELYAW 275

Query: 373 G---DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
           G   +G   +G   +   +S   P ++       ++  I CG  HT A TS+  +F++G 
Sbjct: 276 GHCANGRLGIGNNDEAVFLSSPHPIRMPTSE---KVRFIACGAEHTLACTSS-TVFSWGS 331

Query: 430 GTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA-GKTSGSNGLSSKK 487
           G  G LGHG D S    P E+  LK    +    G WH+A ++ +   K SG        
Sbjct: 332 GDGGRLGHGSDCSDRWEPTEIVALKGSHVLDLGAGTWHSACVIAIPLMKDSG-------W 384

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           L+TWG G +GQLG G       P  V    D     V CG S   A+ + G +++ GS  
Sbjct: 385 LYTWGSGYQGQLGQGTVCKSSTPALVTGLCDAFVSAVFCGSSHNAAIASDGNLYTWGSNK 444

Query: 548 YGQLG 552
           +G LG
Sbjct: 445 HGALG 449



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 170/397 (42%), Gaps = 58/397 (14%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGH--GVEADVSY--PKLIDALNGSNIHMVAC 355
           S + G+  +   T Q Q+F WG    G LG     + +V +  P+L++ LNG  I   + 
Sbjct: 147 STSNGANISFATTHQHQVFVWGGTGVGLLGFTSSSKQNVMFETPQLVEELNGEEIIKTSI 206

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
           G  H CAV+  GDL+ WG+G  + G+LG   + ++    K    ++ + +  +  G  H 
Sbjct: 207 GSSHACAVSKGGDLFVWGNG--SFGVLG-TGDTNNVDTPKCLNTLDKIAVVDVVTGEKHA 263

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSST---SVPREVETLKELKTVMASCGVWHTAAIVE 472
              TS  +L+ +G    G LG G+       S P  +      K    +CG  HT A   
Sbjct: 264 CIKTSQHELYAWGHCANGRLGIGNNDEAVFLSSPHPIRMPTSEKVRFIACGAEHTLAC-- 321

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACG--HS 529
                      +S  +F+WG G  G+LGHG D   R  P  +          +  G  HS
Sbjct: 322 -----------TSSTVFSWGSGDGGRLGHGSDCSDRWEPTEIVALKGSHVLDLGAGTWHS 370

Query: 530 ---ITIALTA-TGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHI 583
              I I L   +G +++ GS   GQLG  G+  K   P  + G +   ++  + CGS H 
Sbjct: 371 ACVIAIPLMKDSGWLYTWGSGYQGQLGQ-GTVCKSSTPALVTG-LCDAFVSAVFCGSSHN 428

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQ--TP---------TLVEALRDKQVKSVVCGS 632
           A ++S   +YTWG   +G LG    E     TP         T+V  +     +SV CG 
Sbjct: 429 AAIASDGNLYTWGSNKHGALGRLIEEKSTAFTPHPGIVIEFGTIVNRIGRGLPRSVTCGR 488

Query: 633 NFTAAICLHKGVSIADHSICSGCRNQ----FNFRRRR 665
           ++T          +A H       N+    F+ +RRR
Sbjct: 489 DYTI---------VATHPYHGPTENEALEFFDAKRRR 516



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 117/258 (45%), Gaps = 36/258 (13%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           GD+F+WG G   G+LG         + D  +   PK L +   +    +  G KHA + T
Sbjct: 218 GDLFVWGNG-SFGVLG---------TGDTNNVDTPKCLNTLDKIAVVDVVTGEKHACIKT 267

Query: 313 KQGQIFSWGEGSGGKLGHGVEAD---VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
            Q ++++WG  + G+LG G   +   +S P  I       +  +ACG  HT A T S  +
Sbjct: 268 SQHELYAWGHCANGRLGIGNNDEAVFLSSPHPIRMPTSEKVRFIACGAEHTLACT-SSTV 326

Query: 370 YTWGDGIHNLGLLGQVSEIS-HWIPRKVSGQMEGLQISSICCGPWHTAAITS------AG 422
           ++WG G  + G LG  S+ S  W P ++   ++G  +  +  G WH+A + +      +G
Sbjct: 327 FSWGSG--DGGRLGHGSDCSDRWEPTEIVA-LKGSHVLDLGAGTWHSACVIAIPLMKDSG 383

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            L+T+G G  G LG G    +S P  V  L +       CG  H AAI            
Sbjct: 384 WLYTWGSGYQGQLGQGTVCKSSTPALVTGLCDAFVSAVFCGSSHNAAIA----------- 432

Query: 483 LSSKKLFTWGDGAEGQLG 500
            S   L+TWG    G LG
Sbjct: 433 -SDGNLYTWGSNKHGALG 449


>gi|194227810|ref|XP_001917704.1| PREDICTED: LOW QUALITY PROTEIN: x-linked retinitis pigmentosa
           GTPase regulator-like [Equus caballus]
          Length = 915

 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 167/342 (48%), Gaps = 35/342 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           +ACG +H  +VT   +++ +G  + G+LG G E+ VS P  I AL    +  VACG  HT
Sbjct: 40  LACGDEHTAVVTGNNKLYMFGSNNWGQLGLGSESPVSKPTCIKALKPEKVKFVACGRTHT 99

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
              T  G +Y  G   ++ G LG   +       ++       +I  +  G   +AA+T 
Sbjct: 100 IVATEGGKVYATGG--NSEGQLGLGDDEDRNTFHRIKFFTSQHKIKQLSAGSSSSAALTE 157

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            G+LF +GD + G +G  +  +  VP +V   K +  V  SCG +H+A I      T G 
Sbjct: 158 DGELFMWGDNSEGQIGLKNIDNVCVPHQVTIGKPISWV--SCGYYHSAFIT-----TEG- 209

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDA---EPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
                 +L+T+G+   G+LG         R+  L   + + +   +VACG   T+ LT  
Sbjct: 210 ------ELYTFGEPESGKLGLPSKLLINHRIPQLVPGIPEKV--IQVACGGGHTVVLTEN 261

Query: 538 GQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             V++ G   +GQLG     G F      PT IE +IK + I  I+CG  H A+++    
Sbjct: 262 A-VYTFGLGQFGQLG----LGTFIFETSEPTVIE-HIKDQKISYISCGENHTALITDTGL 315

Query: 592 VYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
           +YT+G G +G+LG G  +  N+  PTL  + R   V+ V CG
Sbjct: 316 IYTFGDGRHGKLGLGLENFTNQFVPTLCCSSRRFIVQLVACG 357



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 127/276 (46%), Gaps = 50/276 (18%)

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
           + CG  HTA +T   KL+ FG   +G LG G  S  S P  ++ LK  K    +CG  HT
Sbjct: 40  LACGDEHTAVVTGNNKLYMFGSNNWGQLGLGSESPVSKPTCIKALKPEKVKFVACGRTHT 99

Query: 468 AAIVE------VAGKTSGSNGLSSKK---------------------------------- 487
               E        G + G  GL   +                                  
Sbjct: 100 IVATEGGKVYATGGNSEGQLGLGDDEDRNTFHRIKFFTSQHKIKQLSAGSSSSAALTEDG 159

Query: 488 -LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
            LF WGD +EGQ+G  + +   VP  V +   IS+  V+CG+  +  +T  G++++ G  
Sbjct: 160 ELFMWGDNSEGQIGLKNIDNVCVPHQVTIGKPISW--VSCGYYHSAFITTEGELYTFGEP 217

Query: 547 DYGQLGSPGS---TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           + G+LG P       + P  + G I  + I+ +ACG  H  VV +++ VYT+G G  GQL
Sbjct: 218 ESGKLGLPSKLLINHRIPQLVPG-IPEKVIQ-VACGGGH-TVVLTENAVYTFGLGQFGQL 274

Query: 604 GHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAAI 638
           G G    + + PT++E ++D+++  + CG N TA I
Sbjct: 275 GLGTFIFETSEPTVIEHIKDQKISYISCGENHTALI 310



 Score = 46.2 bits (108), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE--ADVSYPKLIDA 344
           P V+E         I+CG  H  L+T  G I+++G+G  GKLG G+E   +   P L  +
Sbjct: 286 PTVIEHIKDQKISYISCGENHTALITDTGLIYTFGDGRHGKLGLGLENFTNQFVPTLCCS 345

Query: 345 LNGSNIHMVACGEFH 359
                + +VACG  H
Sbjct: 346 SRRFIVQLVACGGCH 360


>gi|66817532|ref|XP_642619.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
 gi|60470703|gb|EAL68677.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
          Length = 849

 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 143/273 (52%), Gaps = 32/273 (11%)

Query: 382 LGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS 441
           LG++ +++  IP ++    E  ++  +  G   +AA+T +G+L+T+G    G LG G+R 
Sbjct: 193 LGKIIDLNQTIPMQIQDIPE--EVVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLGLGNRW 250

Query: 442 STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH 501
             S P+ V+TL ++  V   CG  H  AI +              ++++WG G  GQLGH
Sbjct: 251 FHSTPQLVKTLIDVNIVSVVCGRQHICAITD------------QGEVYSWGLGVFGQLGH 298

Query: 502 GDAE----PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSP--- 554
           G+ +    P+ +   V++++ I+  +VACG + T+  +  G +++ G  +YGQLGS    
Sbjct: 299 GNVKSYLHPKKIQQFVELNERIA--QVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTEET 356

Query: 555 ------GSTGKFPTRIEGNIKH---RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
                 G    F   I   +K    + I+++ACG  H  VV+ ++EVY WG G++G LG 
Sbjct: 357 QHLDFGGRDNHFKYSIPIVVKSLETKKIKNVACGHLHTIVVTDENEVYQWGWGSSGALGL 416

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G+   +  P L+ +L  +++ S+  G   T  +
Sbjct: 417 GNKRFQLVPQLITSLSGEEIASITAGEKHTIVV 449



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 173/394 (43%), Gaps = 53/394 (13%)

Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV-------EA 334
           ++ L P V+E  +         G  H++ V++ G ++SWG    G+LG G          
Sbjct: 20  KECLEPTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVYSWGRSKEGQLGIGQGYGGSDKVM 79

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNL-----GLLGQVSEIS 389
            V+ P LI +L    I  VACG FH+ A+T  G +Y WG  +H L      L  Q +   
Sbjct: 80  FVAKPTLIKSLQHERIIKVACGNFHSLALTDMGKVYEWGQ-LHRLDESQSSLDIQSTNGL 138

Query: 390 HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA----------LGHGD 439
             +PR  S ++    +S    G    A   + G      D    A          LG   
Sbjct: 139 IEMPRLSSQRIIEASVSQYLSGE-KKAYDANGGTKPKDDDEDKEASNSAQSKSKHLGKII 197

Query: 440 RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQL 499
             + ++P +++ + E   V+   G W  +A V  +G           +L+TWG   +GQL
Sbjct: 198 DLNQTIPMQIQDIPE--EVVDVSGGWAFSAAVTKSG-----------RLYTWGFNEKGQL 244

Query: 500 GHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK 559
           G G+      P  VK   D++   V CG     A+T  G+V+S G   +GQLG  G+   
Sbjct: 245 GLGNRWFHSTPQLVKTLIDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQLGH-GNVKS 303

Query: 560 F--PTRIEGNIK-HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG---------- 606
           +  P +I+  ++ +  I  +ACGS    V S +  +Y +G G  GQLG            
Sbjct: 304 YLHPKKIQQFVELNERIAQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGG 363

Query: 607 -DNENKQT-PTLVEALRDKQVKSVVCGSNFTAAI 638
            DN  K + P +V++L  K++K+V CG   T  +
Sbjct: 364 RDNHFKYSIPIVVKSLETKKIKNVACGHLHTIVV 397



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 27/237 (11%)

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           VTK G++++WG    G+LG G     S P+L+  L   NI  V CG  H CA+T  G++Y
Sbjct: 227 VTKSGRLYTWGFNEKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVCGRQHICAITDQGEVY 286

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQME-GLQISSICCGPWHTAAITSAGKLFTFGD 429
           +WG G+   G LG  +  S+  P+K+   +E   +I+ + CG   T   +  G L+ FG 
Sbjct: 287 SWGLGV--FGQLGHGNVKSYLHPKKIQQFVELNERIAQVACGSNFTMVRSVQGLLYAFGH 344

Query: 430 GTFGALGHGDRSS------------TSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           G +G LG  + +              S+P  V++L+  K    +CG  HT  + +     
Sbjct: 345 GEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNVACGHLHTIVVTD----- 399

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                    +++ WG G+ G LG G+   ++VP  +          +  G   TI +
Sbjct: 400 -------ENEVYQWGWGSSGALGLGNKRFQLVPQLITSLSGEEIASITAGEKHTIVV 449



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 152/336 (45%), Gaps = 21/336 (6%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           + S G+   G+LGH    +   P +I+ L G  I     GE H+ AV+  GD+Y+WG   
Sbjct: 3   VLSVGQSKNGQLGHDSIKECLEPTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVYSWGRSK 62

Query: 377 H-NLGL---LGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---- 428
              LG+    G   ++       +   ++  +I  + CG +H+ A+T  GK++ +G    
Sbjct: 63  EGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLALTDMGKVYEWGQLHR 122

Query: 429 -DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTA--AIVEVAGKTSGSNGLSS 485
            D +  +L   D  ST+   E+  L   + + AS   + +      +  G T   +    
Sbjct: 123 LDESQSSL---DIQSTNGLIEMPRLSSQRIIEASVSQYLSGEKKAYDANGGTKPKDDDED 179

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI--SFCKVACGHSITIALTATGQVFSM 543
           K+           LG      + +P+ ++   DI      V+ G + + A+T +G++++ 
Sbjct: 180 KEASNSAQSKSKHLGKIIDLNQTIPMQIQ---DIPEEVVDVSGGWAFSAAVTKSGRLYTW 236

Query: 544 GSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           G  + GQLG          ++   +    I  + CG  HI  ++ + EVY+WG G  GQL
Sbjct: 237 GFNEKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQL 296

Query: 604 GHGDNENKQTPTLVEAL--RDKQVKSVVCGSNFTAA 637
           GHG+ ++   P  ++     ++++  V CGSNFT  
Sbjct: 297 GHGNVKSYLHPKKIQQFVELNERIAQVACGSNFTMV 332



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 45/78 (57%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
           +P V++S      +++ACG  H ++VT + +++ WG GS G LG G +     P+LI +L
Sbjct: 372 IPIVVKSLETKKIKNVACGHLHTIVVTDENEVYQWGWGSSGALGLGNKRFQLVPQLITSL 431

Query: 346 NGSNIHMVACGEFHTCAV 363
           +G  I  +  GE HT  V
Sbjct: 432 SGEEIASITAGEKHTIVV 449



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 9/107 (8%)

Query: 540 VFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           V S+G +  GQLG         PT IEG +  R I+ ++ G  H   VS   +VY+WG+ 
Sbjct: 3   VLSVGQSKNGQLGHDSIKECLEPTVIEGLLGKRIIQTVS-GEAHSLAVSRFGDVYSWGRS 61

Query: 599 ANGQLGHGDNENKQ-------TPTLVEALRDKQVKSVVCGSNFTAAI 638
             GQLG G              PTL+++L+ +++  V CG+  + A+
Sbjct: 62  KEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLAL 108


>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
           porcellus]
          Length = 1016

 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 175/356 (49%), Gaps = 33/356 (9%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G +HA+L+     + + G+ SGG+LG         P+ I AL    + +V+CG+ H+ 
Sbjct: 35  ASGERHALLLLTNQVVHACGDNSGGQLGRRGAPSGKQPEPIQALVNLPVDLVSCGKEHSL 94

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV   G ++ WG G       G+  EI  +IP+K+   + G++I  I CG +H+ A++  
Sbjct: 95  AVCHKGKVFAWGVGSDGQLGTGKFEEIC-FIPQKIKA-LTGIKIIQISCGYYHSLALSKD 152

Query: 422 GKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           G++F++G  + G LG G +  S + P+ V +L+ +     + G  H+ A+       SG+
Sbjct: 153 GQVFSWGKNSHGQLGLGQEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-----SLSGT 207

Query: 481 NGLSSKKLFTWGDGAEGQL---GHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
           +       F WG+ + GQL   G+        P  V    ++    ++CG+  T  LT  
Sbjct: 208 S-------FGWGNNSAGQLAFSGNNVLVQSYKPRSVGALKNLGVVYISCGYEHTAVLTQN 260

Query: 538 GQVFSMGSADYGQLGSPG---STGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVY 593
            QVF+ G   +GQLG  G   +TG  P  +EG      +  I CGSYH +A V +  +V 
Sbjct: 261 DQVFTFGDNSFGQLGHNGVSQTTG--PQLVEG--IGGPVSQIDCGSYHTLAYVYTTGQVV 316

Query: 594 TWGK----GANGQLGHGDNENKQTPTLVEA--LRDKQVKSVVCGSNFTAAICLHKG 643
           ++G+     +N       +EN     L+ A  LRD Q+K +  G+ +   +  H+G
Sbjct: 317 SFGREPSHTSNPTHPETPSENSDISCLISADDLRDIQIKHIFAGT-YADFVTTHQG 371


>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 784

 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 129/413 (31%), Positives = 186/413 (45%), Gaps = 33/413 (7%)

Query: 233 LSSAVSSSSQGSCHE-DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE 291
           L S V++ + G  H       G V+ WG G  +G LG      + S  DR        L 
Sbjct: 313 LPSGVTAIAAGGAHTCALTSSGGVWCWG-GNDSGQLG------DGSYTDRSTPGAVSGLP 365

Query: 292 STVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH 351
           S V     +IA G  H    T  G ++ WG    G+LG G   D S P  +  L  S + 
Sbjct: 366 SGVT----AIAAGGAHTCARTSSGGVWCWGGNFYGQLGDGTTTDRSTPGAVSGLP-SGVT 420

Query: 352 MVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCG 411
            +A G +HTCA+T S  ++ WGD  +  G LG  +  +   P  VSG   G  +++I  G
Sbjct: 421 AIAAGNYHTCALTGSDGVWCWGDNFY--GQLGDGTTTNRSTPGAVSGLPSG--VTAIAAG 476

Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIV 471
            +HT A+TS+G ++ +G    G LG G  ++ S P  V  L    T +A+ G +HT A+ 
Sbjct: 477 NYHTCALTSSGGVWCWGRNDSGQLGDGTTTNRSTPGAVGGLPSGVTAIAA-GDYHTCAL- 534

Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
                      +SS  ++ WG    GQLG G       P+ V          +A G+  T
Sbjct: 535 -----------MSSGGVWCWGLNNRGQLGDGSYTDSSTPVAVGGLPS-GVMAIAAGNYHT 582

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            ALT +  V+  G+   GQLG  G+T    T +  +     +  IA G+YH   ++S   
Sbjct: 583 CALTGSDGVWCWGTNSDGQLGD-GTTTNRSTPVAVSGLPSGVTAIAAGNYHTCALTSSGG 641

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           V+ WG   +GQLG G   N+ TP  V  L    V ++  G   T A+    GV
Sbjct: 642 VWCWGYNLSGQLGDGTTTNRSTPGAVSGL-PSGVTAIAAGDEHTCALTGSGGV 693



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 166/368 (45%), Gaps = 39/368 (10%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
           +  V  S +  +  +IA G  H   +T  G ++ WG+   G+LG G   D S P  +  L
Sbjct: 203 ITPVAVSGLPSEVTAIAAGYAHTCALTGSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGGL 262

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
             S +  +A G  +TCA+T SG ++ WG   ++ G LG  S  +   P  V G   G  +
Sbjct: 263 P-SGVTAIAAGGRYTCALTSSGGVWCWGR--NDSGQLGDGSFTNRSTPGAVGGLPSG--V 317

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
           ++I  G  HT A+TS+G ++ +G    G LG G  +  S P  V  L    T +A+ G  
Sbjct: 318 TAIAAGGAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLPSGVTAIAAGGA- 376

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK-VSDDISFCKV 524
           HT A              SS  ++ WG    GQLG G    R  P  V  +   ++   +
Sbjct: 377 HTCART------------SSGGVWCWGGNFYGQLGDGTTTDRSTPGAVSGLPSGVT--AI 422

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLG--------SPGSTGKFPTRIEGNIKHRYIEDI 576
           A G+  T ALT +  V+  G   YGQLG        +PG+    P+ +           I
Sbjct: 423 AAGNYHTCALTGSDGVWCWGDNFYGQLGDGTTTNRSTPGAVSGLPSGVT---------AI 473

Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTA 636
           A G+YH   ++S   V+ WG+  +GQLG G   N+ TP  V  L    V ++  G   T 
Sbjct: 474 AAGNYHTCALTSSGGVWCWGRNDSGQLGDGTTTNRSTPGAVGGL-PSGVTAIAAGDYHTC 532

Query: 637 AICLHKGV 644
           A+    GV
Sbjct: 533 ALMSSGGV 540



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 128/440 (29%), Positives = 191/440 (43%), Gaps = 57/440 (12%)

Query: 193 AAAKAYTRAESVSKSL-----NFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
           AA  A+T A + S  +     NF   G L D  +   +       L S V++ + G+ H 
Sbjct: 372 AAGGAHTCARTSSGGVWCWGGNFY--GQLGDGTTTDRSTPGAVSGLPSGVTAIAAGNYHT 429

Query: 248 -DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSK 306
               G   V+ WG+    G LG      + ++ +R        L S V     +IA G+ 
Sbjct: 430 CALTGSDGVWCWGDNF-YGQLG------DGTTTNRSTPGAVSGLPSGVT----AIAAGNY 478

Query: 307 HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
           H   +T  G ++ WG    G+LG G   + S P  +  L  S +  +A G++HTCA+  S
Sbjct: 479 HTCALTSSGGVWCWGRNDSGQLGDGTTTNRSTPGAVGGLP-SGVTAIAAGDYHTCALMSS 537

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
           G ++ WG  ++N G LG  S      P  V G   G+   +I  G +HT A+T +  ++ 
Sbjct: 538 GGVWCWG--LNNRGQLGDGSYTDSSTPVAVGGLPSGVM--AIAAGNYHTCALTGSDGVWC 593

Query: 427 FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
           +G  + G LG G  ++ S P  V  L    T +A+ G +HT A+             SS 
Sbjct: 594 WGTNSDGQLGDGTTTNRSTPVAVSGLPSGVTAIAA-GNYHTCALT------------SSG 640

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVK-VSDDISFCKVACGHSITIALTATGQVFSMGS 545
            ++ WG    GQLG G    R  P  V  +   ++   +A G   T ALT +G V+  G 
Sbjct: 641 GVWCWGYNLSGQLGDGTTTNRSTPGAVSGLPSGVT--AIAAGDEHTCALTGSGGVWCWGD 698

Query: 546 ADYGQLG--------SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
             YGQLG        +PG+    P+ +           IA G YH   ++    V  WG 
Sbjct: 699 NYYGQLGDGTTTNRSTPGAVSGLPSGVT---------AIAAGVYHTCALTGSGGVMCWGN 749

Query: 598 GANGQLGHGDNENKQTPTLV 617
             +GQLG G    + TP  V
Sbjct: 750 NGDGQLGDGRPLYRTTPVDV 769



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 153/347 (44%), Gaps = 39/347 (11%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           +IA GS H   +T  G+++ WG    G+LG G   D S P  +  L  S +  +A G  H
Sbjct: 64  AIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPVAVSGLP-SGVTAIAAGGAH 122

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           TCA+T SG +  WG   +  G LG  S      P  VSG   G  +++I  G  HT A+ 
Sbjct: 123 TCALTSSGGVMCWGG--NYFGQLGDGSYTDRSTPVAVSGLPSG--VTAIAAGGAHTCALM 178

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
           S+G ++ +G    G LG G       P  V  L    T +A+ G  HT A+         
Sbjct: 179 SSGGVWCWGYNLSGQLGDGSTIYHITPVAVSGLPSEVTAIAA-GYAHTCALT-------- 229

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV-KVSDDISFCKVACGHSITIALTATG 538
                S  ++ WGD   GQLG G       P  V  +   ++   +A G   T ALT++G
Sbjct: 230 ----GSGGVWCWGDNGFGQLGDGSFTDSSTPAAVGGLPSGVT--AIAAGGRYTCALTSSG 283

Query: 539 QVFSMGSADYGQLG--------SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
            V+  G  D GQLG        +PG+ G  P+          +  IA G  H   ++S  
Sbjct: 284 GVWCWGRNDSGQLGDGSFTNRSTPGAVGGLPSG---------VTAIAAGGAHTCALTSSG 334

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            V+ WG   +GQLG G   ++ TP  V  L    V ++  G   T A
Sbjct: 335 GVWCWGGNDSGQLGDGSYTDRSTPGAVSGL-PSGVTAIAAGGAHTCA 380



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 109/219 (49%), Gaps = 20/219 (9%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
            +IA G+ H   +T    ++ WG  S G+LG G   + S P  +  L  S +  +A G +
Sbjct: 573 MAIAAGNYHTCALTGSDGVWCWGTNSDGQLGDGTTTNRSTPVAVSGLP-SGVTAIAAGNY 631

Query: 359 HTCAVTLSGDLYTWGDGIHNL-GLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           HTCA+T SG ++ WG   +NL G LG  +  +   P  VSG   G  +++I  G  HT A
Sbjct: 632 HTCALTSSGGVWCWG---YNLSGQLGDGTTTNRSTPGAVSGLPSG--VTAIAAGDEHTCA 686

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +T +G ++ +GD  +G LG G  ++ S P  V  L    T +A+ GV+HT A+       
Sbjct: 687 LTGSGGVWCWGDNYYGQLGDGTTTNRSTPGAVSGLPSGVTAIAA-GVYHTCALT------ 739

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
                  S  +  WG+  +GQLG G    R  P+ V  S
Sbjct: 740 ------GSGGVMCWGNNGDGQLGDGRPLYRTTPVDVVTS 772



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 121/288 (42%), Gaps = 61/288 (21%)

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +++I  G WHT A+T +G+++ +G    G LG G  +  S P  V  L    T +A+ G 
Sbjct: 62  VTAIAAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPVAVSGLPSGVTAIAAGGA 121

Query: 465 WHTAAI----------------------------VEVAGKTSGSNG-----------LSS 485
            HT A+                            V V+G  SG              +SS
Sbjct: 122 -HTCALTSSGGVMCWGGNYFGQLGDGSYTDRSTPVAVSGLPSGVTAIAAGGAHTCALMSS 180

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVK-VSDDISFCKVACGHSITIALTATGQVFSMG 544
             ++ WG    GQLG G     + P+ V  +  +++   +A G++ T ALT +G V+  G
Sbjct: 181 GGVWCWGYNLSGQLGDGSTIYHITPVAVSGLPSEVT--AIAAGYAHTCALTGSGGVWCWG 238

Query: 545 SADYGQLG--------SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
              +GQLG        +P + G  P+          +  IA G  +   ++S   V+ WG
Sbjct: 239 DNGFGQLGDGSFTDSSTPAAVGGLPSG---------VTAIAAGGRYTCALTSSGGVWCWG 289

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           +  +GQLG G   N+ TP  V  L    V ++  G   T A+    GV
Sbjct: 290 RNDSGQLGDGSFTNRSTPGAVGGL-PSGVTAIAAGGAHTCALTSSGGV 336


>gi|224008819|ref|XP_002293368.1| guanyl nucleotide exchange factor [Thalassiosira pseudonana
           CCMP1335]
 gi|220970768|gb|EED89104.1| guanyl nucleotide exchange factor [Thalassiosira pseudonana
           CCMP1335]
          Length = 400

 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 165/340 (48%), Gaps = 33/340 (9%)

Query: 275 EISSADRRDALLPKVLESTV---VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG 331
           +    DR D   PK+L   +   V   Q  A G +  +++ K G++ S+G    G LGHG
Sbjct: 14  QCGHGDREDVSEPKLLLGKIGWGVRIVQVAAGGGQLDLMLKKSGRVLSFGTAQYGALGHG 73

Query: 332 VEA-----DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVS 386
            +A     D   P+ IDAL    +  V+ GE H+  VT  GD+YTWG+G    G LG   
Sbjct: 74  YDAGKQLSDCLRPRYIDALKNEKVICVSAGELHSGCVTADGDVYTWGEGF--CGQLGLGD 131

Query: 387 EISHWIPRKVS-GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH-----GDR 440
              H +P +V+ G +E   +S++ CG  HT  +T  G++F++G G +G L        D 
Sbjct: 132 RRPHLLPEQVTLGGLEDECVSNMSCGCRHTLVVTEEGEVFSWGLGRYGVLDALNLTLDDP 191

Query: 441 SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG 500
           S    P+ V+ L   + V  S G  H+  + E  G            L+T+G GA G LG
Sbjct: 192 SDQCFPKLVDALGAFRAVGVSAGHRHSMVLDEHGG------------LYTFGSGASGALG 239

Query: 501 HGDAEPRVVPLCVKV--SDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG 558
           HGD   +  P+ V     +++   +++ G  +++A++ TG V++ G A  G++G   +  
Sbjct: 240 HGDLVGQEFPVKVMQFEENNVRIHQMSAGVDMSMAVSTTGDVYAWGKAKEGRIGLGNNND 299

Query: 559 K-FPTRIE-GNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
              P +++ G+   + + D+ CG  H  ++     VY  G
Sbjct: 300 ICLPRKVDVGDANFKGV-DVECGYVHSLIIGLDGSVYQCG 338



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 131/323 (40%), Gaps = 78/323 (24%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           I SWG    G+ GHG   DVS PKL                                   
Sbjct: 4   IASWGVAKRGQCGHGDREDVSEPKL----------------------------------- 28

Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
               LLG++     W  R V     G Q+  +         +  +G++ +FG   +GALG
Sbjct: 29  ----LLGKIG----WGVRIVQVAAGGGQLDLM---------LKKSGRVLSFGTAQYGALG 71

Query: 437 HGDRSSTSV-----PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           HG  +   +     PR ++ LK  K +  S G  H+  +             +   ++TW
Sbjct: 72  HGYDAGKQLSDCLRPRYIDALKNEKVICVSAGELHSGCVT------------ADGDVYTW 119

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVS--DDISFCKVACGHSITIALTATGQVFSMGSADYG 549
           G+G  GQLG GD  P ++P  V +   +D     ++CG   T+ +T  G+VFS G   YG
Sbjct: 120 GEGFCGQLGLGDRRPHLLPEQVTLGGLEDECVSNMSCGCRHTLVVTEEGEVFSWGLGRYG 179

Query: 550 QLGSPGSTGK------FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
            L +   T        FP  ++     R +  ++ G  H  V+     +YT+G GA+G L
Sbjct: 180 VLDALNLTLDDPSDQCFPKLVDALGAFRAV-GVSAGHRHSMVLDEHGGLYTFGSGASGAL 238

Query: 604 GHGDNENKQTPTLVEALRDKQVK 626
           GHGD   ++ P  V    +  V+
Sbjct: 239 GHGDLVGQEFPVKVMQFEENNVR 261



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 115/250 (46%), Gaps = 34/250 (13%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLD--AQSIACGSKHAVL 310
           GDV+ WGEG             ++   DRR  LLP+ +    + D    +++CG +H ++
Sbjct: 114 GDVYTWGEGFCG----------QLGLGDRRPHLLPEQVTLGGLEDECVSNMSCGCRHTLV 163

Query: 311 VTKQGQIFSWGEGSGG-----KLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTL 365
           VT++G++FSWG G  G      L     +D  +PKL+DAL       V+ G  H+  +  
Sbjct: 164 VTEEGEVFSWGLGRYGVLDALNLTLDDPSDQCFPKLVDALGAFRAVGVSAGHRHSMVLDE 223

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQME--GLQISSICCGPWHTAAITSAGK 423
            G LYT+G G    G LG    +    P KV  Q E   ++I  +  G   + A+++ G 
Sbjct: 224 HGGLYTFGSGAS--GALGHGDLVGQEFPVKVM-QFEENNVRIHQMSAGVDMSMAVSTTGD 280

Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLK-ELKTVMASCGVWHTAAI-----------V 471
           ++ +G    G +G G+ +   +PR+V+      K V   CG  H+  I           V
Sbjct: 281 VYAWGKAKEGRIGLGNNNDICLPRKVDVGDANFKGVDVECGYVHSLIIGLDGSVYQCGGV 340

Query: 472 EVAGKTSGSN 481
            V GK  G N
Sbjct: 341 GVDGKDDGQN 350



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 77/162 (47%), Gaps = 16/162 (9%)

Query: 490 TWGDGAEGQLGHGDAEPRVVP--LCVKVSDDISFCKVACGHS-ITIALTATGQVFSMGSA 546
           +WG    GQ GHGD E    P  L  K+   +   +VA G   + + L  +G+V S G+A
Sbjct: 6   SWGVAKRGQCGHGDREDVSEPKLLLGKIGWGVRIVQVAAGGGQLDLMLKKSGRVLSFGTA 65

Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYI-----EDIAC---GSYHIAVVSSKSEVYTWGKG 598
            YG LG     GK   ++   ++ RYI     E + C   G  H   V++  +VYTWG+G
Sbjct: 66  QYGALGHGYDAGK---QLSDCLRPRYIDALKNEKVICVSAGELHSGCVTADGDVYTWGEG 122

Query: 599 ANGQLGHGDNENKQTPTLVE--ALRDKQVKSVVCGSNFTAAI 638
             GQLG GD      P  V    L D+ V ++ CG   T  +
Sbjct: 123 FCGQLGLGDRRPHLLPEQVTLGGLEDECVSNMSCGCRHTLVV 164


>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 417

 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 177/375 (47%), Gaps = 36/375 (9%)

Query: 275 EISSADRRDALLP-KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGE-GSGGKLGHGV 332
           ++   D  D  LP  V E  V       A G     L+T + +++ WG  G    L    
Sbjct: 65  QLGVGDLEDYQLPVPVQELPVGASYIDAAAGWTQNFLLTTRHELYYWGSSGVYALLPMRR 124

Query: 333 EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI 392
           +  + YP L +      I  +  G  H  A++ +G++Y WG+     G  G  ++ +  +
Sbjct: 125 DKRIYYPTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYIWGN--SEFGQTGLGNKEAQHL 182

Query: 393 PRKVSGQMEGLQ---ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV 449
           P +    ME  +   I  + CG  H+AA++  G+++T+G G  G LGH        P+E+
Sbjct: 183 PIR----MEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNGTEDELKPKEL 238

Query: 450 ETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD----AE 505
             ++       +CG   T  + E  G+           LFT+G+G  GQLGHG+     E
Sbjct: 239 TVIRGEGISRVTCGTDFTGLLNETEGR-----------LFTFGNGEAGQLGHGERGLCLE 287

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTR 563
           P VVPL     D++   +VA G +  +ALT  GQ +S G  + G+LG  G+T  F  P  
Sbjct: 288 PSVVPL-----DNVK--EVAAGGAHMLALTKDGQAWSWGWGEDGRLGH-GATEDFLKPEP 339

Query: 564 IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDK 623
           I        +  ++ G  H   ++   +VY WG  A+G+LG G+  +  TPTL++AL DK
Sbjct: 340 IPTLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGRLGLGNESSVMTPTLIKALADK 399

Query: 624 QVKSVVCGSNFTAAI 638
           +V   +CG + +  I
Sbjct: 400 RVLRAICGLDHSLFI 414



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 120/290 (41%), Gaps = 44/290 (15%)

Query: 253 GDVFIWGE------GLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSK 306
           G+V+IWG       GLGN                +    LP  +E         ++CG  
Sbjct: 159 GEVYIWGNSEFGQTGLGN----------------KEAQHLPIRMEFFRDKSIVDVSCGLD 202

Query: 307 HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG-EFHTCAVTL 365
           H+  V+K G++++WG G  G+LGH    D   PK +  + G  I  V CG +F       
Sbjct: 203 HSAAVSKDGRVWTWGYGIDGQLGHNGTEDELKPKELTVIRGEGISRVTCGTDFTGLLNET 262

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            G L+T+G+G    G LG         P  V        +  +  G  H  A+T  G+ +
Sbjct: 263 EGRLFTFGNG--EAGQLGHGERGLCLEPSVVPLD----NVKEVAAGGAHMLALTKDGQAW 316

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETL-KELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           ++G G  G LGHG       P  + TL   +  V  S G  H+ A+ E            
Sbjct: 317 SWGWGEDGRLGHGATEDFLKPEPIPTLGPAVGVVSVSAGGGHSLALTE------------ 364

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITI 532
           S +++ WG  A G+LG G+    + P  +K   D    +  CG  HS+ I
Sbjct: 365 SGQVYGWGFNASGRLGLGNESSVMTPTLIKALADKRVLRAICGLDHSLFI 414



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 14/217 (6%)

Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
           ++T G G    LG GD     +P  V+ L    + + +   W    ++            
Sbjct: 55  VYTCGTGRNAQLGVGDLEDYQLPVPVQELPVGASYIDAAAGWTQNFLLT----------- 103

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVV-PLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
           +  +L+ WG      L     + R+  P   + +  +   K+  G    IAL+  G+V+ 
Sbjct: 104 TRHELYYWGSSGVYALLPMRRDKRIYYPTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYI 163

Query: 543 MGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
            G++++GQ G      +  P R+E   + + I D++CG  H A VS    V+TWG G +G
Sbjct: 164 WGNSEFGQTGLGNKEAQHLPIRME-FFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDG 222

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           QLGH   E++  P  +  +R + +  V CG++FT  +
Sbjct: 223 QLGHNGTEDELKPKELTVIRGEGISRVTCGTDFTGLL 259



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 37/65 (56%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           S++ G  H++ +T+ GQ++ WG  + G+LG G E+ V  P LI AL    +    CG  H
Sbjct: 351 SVSAGGGHSLALTESGQVYGWGFNASGRLGLGNESSVMTPTLIKALADKRVLRAICGLDH 410

Query: 360 TCAVT 364
           +  +T
Sbjct: 411 SLFIT 415


>gi|340505322|gb|EGR31664.1| hypothetical protein IMG5_104860 [Ichthyophthirius multifiliis]
          Length = 1126

 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 141/275 (51%), Gaps = 26/275 (9%)

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           L    I  +ACG  HT  +  +  LY++G G    GLLG        IP++++ + + +Q
Sbjct: 18  LQDKEIIYIACGHHHTLIIDENNQLYSFGMG--KTGLLGNEHLEDVKIPQQLNLKQKFVQ 75

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           ++   CG  H+ A+T +G +F++G    G LGHG+++    P+EV    ++      CG 
Sbjct: 76  VA---CGATHSLALTISGIIFSWGKNLRGQLGHGNQNDCLKPKEV-IQNDIIAEYIDCGD 131

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
            H+A + +            +K+L+TWG+G   +LGHG     ++P  V V +D     V
Sbjct: 132 QHSAFVSK------------NKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHV 179

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNI-----KHRYIEDIA 577
           +CG + T+ +T  G V++ G   YG+LG      T   PTR+ G I     K++    +A
Sbjct: 180 SCGMNHTLIVTGEGFVYAWGDGMYGKLGVSEDCKTQTLPTRV-GMICKKFRKNKMYYQVA 238

Query: 578 CGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
            GS H   +S+  +++TWG   +G LG G N++ Q
Sbjct: 239 AGSMHSLALSTNGQIFTWGSSKSGNLGIGYNKDIQ 273



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 132/258 (51%), Gaps = 24/258 (9%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           IACG  H +++ +  Q++S+G G  G LG+    DV  P+ ++         VACG  H+
Sbjct: 26  IACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIPQQLNL--KQKFVQVACGATHS 83

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T+SG +++WG  +   G LG  ++     P++V      +    I CG  H+A ++ 
Sbjct: 84  LALTISGIIFSWGKNLR--GQLGHGNQNDCLKPKEVI--QNDIIAEYIDCGDQHSAFVSK 139

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
             +L+T+G+G +  LGHG  +   +P++V  L++      SCG+ HT  +          
Sbjct: 140 NKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIVT--------G 191

Query: 481 NGLSSKKLFTWGDGAEGQLGHG-DAEPRVVP-----LCVKVSDDISFCKVACGHSITIAL 534
            G     ++ WGDG  G+LG   D + + +P     +C K   +  + +VA G   ++AL
Sbjct: 192 EGF----VYAWGDGMYGKLGVSEDCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLAL 247

Query: 535 TATGQVFSMGSADYGQLG 552
           +  GQ+F+ GS+  G LG
Sbjct: 248 STNGQIFTWGSSKSGNLG 265



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 111/426 (26%), Positives = 178/426 (41%), Gaps = 58/426 (13%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK-VLESTVVLDAQSIACGSKHAVLV 311
           G +F WG+ L  G LG           ++ D L PK V+++ ++  A+ I CG +H+  V
Sbjct: 90  GIIFSWGKNL-RGQLG---------HGNQNDCLKPKEVIQNDII--AEYIDCGDQHSAFV 137

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           +K  ++++WG G   +LGHGV  D   PK +  L    +  V+CG  HT  VT  G +Y 
Sbjct: 138 SKNKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSCGMNHTLIVTGEGFVYA 197

Query: 372 WGDGIHNLGLLGQVSE--ISHWIPRKVSGQMEGLQ----ISSICCGPWHTAAITSAGKLF 425
           WGDG++  G LG VSE   +  +P +V    +  +       +  G  H+ A+++ G++F
Sbjct: 198 WGDGMY--GKLG-VSEDCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLALSTNGQIF 254

Query: 426 TFGDGTFGALGHGDRSST----SVPREVET-LKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           T+G    G LG G         + P+++   L + K +      ++ A +     K   +
Sbjct: 255 TWGSSKSGNLGIGYNKDIQDYYTQPQKISIKLNKDKNLQFFSLQYYQAELNNKLTKAKNN 314

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS----DDISFCKVACGHSITIALTA 536
           N        +  D  E      D  P  +     +      +I FC+ +  +S  +A   
Sbjct: 315 NKNQINLNDSL-DNIEVIQFKIDMYPLYIIDKQLIQRGPPSNIIFCQASQNNSFFLA--N 371

Query: 537 TGQVFSMGSADYG--------------QLGSPGSTGKFPTRIEG--------NIKHRYIE 574
            GQ+F+ GS   G              Q     +T +  T +            K+  I 
Sbjct: 372 NGQIFACGSVKKGIKLNQNSIVSKKLKQQAKTKNTNEIDTDLNDFNRPFQIQYFKNNIIR 431

Query: 575 DIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD--NENKQTPTLVEALRDKQVKSVVCGS 632
            I+C   H   +S K + Y WGK    QLG G   N N     L   L  K +    C  
Sbjct: 432 YISCSYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNYNYIPQKLQGILETKTIIMSACSD 491

Query: 633 NFTAAI 638
            F+A +
Sbjct: 492 KFSALL 497



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 103/208 (49%), Gaps = 22/208 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           +ACG+ H++ +T  G IFSWG+   G+LGHG + D   PK +   N      + CG+ H+
Sbjct: 76  VACGATHSLALTISGIIFSWGKNLRGQLGHGNQNDCLKPKEV-IQNDIIAEYIDCGDQHS 134

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
             V+ + +LYTWG+G +    LG        IP+KV   +E   ++ + CG  HT  +T 
Sbjct: 135 AFVSKNKELYTWGNGQY--YRLGHGVTTDELIPKKVVV-LEDYYVTHVSCGMNHTLIVTG 191

Query: 421 AGKLFTFGDGTFGALGHGDRSST-SVPREVETL-----KELKTVMASCGVWHTAAIVEVA 474
            G ++ +GDG +G LG  +   T ++P  V  +     K       + G  H+ A+    
Sbjct: 192 EGFVYAWGDGMYGKLGVSEDCKTQTLPTRVGMICKKFRKNKMYYQVAAGSMHSLAL---- 247

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHG 502
                +NG    ++FTWG    G LG G
Sbjct: 248 ----STNG----QIFTWGSSKSGNLGIG 267



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 119/246 (48%), Gaps = 21/246 (8%)

Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV 458
           +++  +I  I CG  HT  I    +L++FG G  G LG+       +P+++  LK+ K V
Sbjct: 17  ELQDKEIIYIACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIPQQL-NLKQ-KFV 74

Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
             +CG  H+ A+       SG        +F+WG    GQLGHG+    + P  V + +D
Sbjct: 75  QVACGATHSLALT-----ISGI-------IFSWGKNLRGQLGHGNQNDCLKPKEV-IQND 121

Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIAC 578
           I    + CG   +  ++   ++++ G+  Y +LG   +T +   +    ++  Y+  ++C
Sbjct: 122 IIAEYIDCGDQHSAFVSKNKELYTWGNGQYYRLGHGVTTDELIPKKVVVLEDYYVTHVSC 181

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQT-PTLVEAL-----RDKQVKSVVCGS 632
           G  H  +V+ +  VY WG G  G+LG  ++   QT PT V  +     ++K    V  GS
Sbjct: 182 GMNHTLIVTGEGFVYAWGDGMYGKLGVSEDCKTQTLPTRVGMICKKFRKNKMYYQVAAGS 241

Query: 633 NFTAAI 638
             + A+
Sbjct: 242 MHSLAL 247



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/340 (22%), Positives = 136/340 (40%), Gaps = 59/340 (17%)

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-----PKLIDALNGSNIH 351
           + Q  ACGS    +   Q  I S       K  +  E D        P  I     + I 
Sbjct: 372 NGQIFACGSVKKGIKLNQNSIVSKKLKQQAKTKNTNEIDTDLNDFNRPFQIQYFKNNIIR 431

Query: 352 MVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCG 411
            ++C   H  A++  G  Y WG  I+    +G  S   ++IP+K+ G +E   I    C 
Sbjct: 432 YISCSYLHAIAISQKGQAYVWGKNIYYQLGVG-YSCNYNYIPQKLQGILETKTIIMSACS 490

Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL-KTVMASCGVWHTAAI 470
              +A +T  G+++TFG    G LGH +++   VP E + + ++ + +  +CG      +
Sbjct: 491 DKFSALLTDKGEVWTFGTSDCGVLGHQEKNYYVVP-EPKMVNDIPQMIYIACG---PQGM 546

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLG-----------------HGDAE--PRVVPL 511
           V ++           ++L+ WG+   GQLG                 +G  +   ++ P 
Sbjct: 547 VSISA--------HKRQLYAWGNNIYGQLGIKIYRTEMNVNEYDEDKNGKQQNNEQIKP- 597

Query: 512 CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY-GQLG------SPGSTGKFPTRI 564
                +++    V  G   ++A+   G+++S G   Y GQ        + G   +F    
Sbjct: 598 -----EEVQIKSVDMGMFHSVAIDNNGKIYSCGLRIYSGQANVFNVEDAKGIDDQFILIR 652

Query: 565 EGNIKHRYIEDIACGSYHIAVVS--------SKSEVYTWG 596
              ++++    ++C  YH   +S        ++  VY WG
Sbjct: 653 TNELQNQQFIQVSCSEYHTLALSIQEQGEEQAQQYVYAWG 692



 Score = 48.1 bits (113), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 2/121 (1%)

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGS--TGKFPTRIEGNIKHRYIEDIACGSY 581
           ++C +   IA++  GQ +  G   Y QLG   S      P +++G ++ + I   AC   
Sbjct: 433 ISCSYLHAIAISQKGQAYVWGKNIYYQLGVGYSCNYNYIPQKLQGILETKTIIMSACSDK 492

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
             A+++ K EV+T+G    G LGH +      P         Q+  + CG     +I  H
Sbjct: 493 FSALLTDKGEVWTFGTSDCGVLGHQEKNYYVVPEPKMVNDIPQMIYIACGPQGMVSISAH 552

Query: 642 K 642
           K
Sbjct: 553 K 553



 Score = 46.6 bits (109), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 88/248 (35%), Gaps = 48/248 (19%)

Query: 439 DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ 498
           D +  + P +++  K       SC   H  AI +              + + WG     Q
Sbjct: 412 DLNDFNRPFQIQYFKNNIIRYISCSYLHAIAISQKG------------QAYVWGKNIYYQ 459

Query: 499 LGHG-DAEPRVVPLCVK-VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG---- 552
           LG G       +P  ++ + +  +    AC    +  LT  G+V++ G++D G LG    
Sbjct: 460 LGVGYSCNYNYIPQKLQGILETKTIIMSACSDKFSALLTDKGEVWTFGTSDCGVLGHQEK 519

Query: 553 ------SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS-KSEVYTWGKGANGQLG- 604
                  P      P  I           IACG   +  +S+ K ++Y WG    GQLG 
Sbjct: 520 NYYVVPEPKMVNDIPQMIY----------IACGPQGMVSISAHKRQLYAWGNNIYGQLGI 569

Query: 605 ------------HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSIC 652
                         D   KQ         + Q+KSV  G   + AI  +  +      I 
Sbjct: 570 KIYRTEMNVNEYDEDKNGKQQNNEQIKPEEVQIKSVDMGMFHSVAIDNNGKIYSCGLRIY 629

Query: 653 SGCRNQFN 660
           SG  N FN
Sbjct: 630 SGQANVFN 637



 Score = 43.9 bits (102), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 4/86 (4%)

Query: 251 GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
           G G V+ WG+G+   L  G     +  +   R  ++ K      +     +A GS H++ 
Sbjct: 191 GEGFVYAWGDGMYGKL--GVSEDCKTQTLPTRVGMICKKFRKNKMY--YQVAAGSMHSLA 246

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADV 336
           ++  GQIF+WG    G LG G   D+
Sbjct: 247 LSTNGQIFTWGSSKSGNLGIGYNKDI 272



 Score = 39.7 bits (91), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 2/76 (2%)

Query: 565 EGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ 624
           E  ++ + I  IACG +H  ++   +++Y++G G  G LG+   E+ + P  +  L+ K 
Sbjct: 15  ELELQDKEIIYIACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIPQQLN-LKQKF 73

Query: 625 VKSVVCGSNFTAAICL 640
           V+ V CG+  + A+ +
Sbjct: 74  VQ-VACGATHSLALTI 88


>gi|348567198|ref|XP_003469388.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Cavia porcellus]
          Length = 780

 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 163/342 (47%), Gaps = 35/342 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H  +VT   +++ +G  + G+LG G ++DV  P  + AL    +   ACG  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSDVKKPTCVKALKPEKVQFAACGRNHT 99

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
             +T+ G++Y  G   +N G LG           ++S       I  +  G   +AA++ 
Sbjct: 100 LILTVVGNVYAAGG--NNEGQLGLGDTEERNTFHRISFFTSEHNIKQLSAGSNTSAALSE 157

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            G+LF +GD + G +G  D  S  VP +V   K +  +  SCG +H +A V + G     
Sbjct: 158 DGRLFMWGDNSEGQIGLNDVISVCVPHQVNIGKPISWI--SCGYYH-SAFVTMDG----- 209

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDA---EPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
                 +L+T+G+   G+LG         R   L   + + +   +VACG   T+ LT  
Sbjct: 210 ------ELYTFGEPESGKLGLPKELLINHRTPQLVAGIPEKV--IQVACGGGHTVVLTEK 261

Query: 538 GQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
             V++ G   +GQLG     G F      P  IE  IK++ I  I+CG  H A++S    
Sbjct: 262 A-VYTFGLGQFGQLG----LGTFCFETLEPKVIE-QIKNQKITYISCGENHTALISDIGL 315

Query: 592 VYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
           +YT+G G +G+LG G  +  N+  P L        V+ V CG
Sbjct: 316 MYTFGDGRHGKLGLGLENFSNQFFPILCSEFLRFTVQLVACG 357



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 139/292 (47%), Gaps = 31/292 (10%)

Query: 269 GAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKL 328
           G+ N  ++    + D   P  +++      Q  ACG  H +++T  G +++ G  + G+L
Sbjct: 60  GSNNWGQLGLGSKSDVKKPTCVKALKPEKVQFAACGRNHTLILTVVGNVYAAGGNNEGQL 119

Query: 329 GHG-VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           G G  E   ++ ++    +  NI  ++ G   + A++  G L+ WGD  ++ G +G    
Sbjct: 120 GLGDTEERNTFHRISFFTSEHNIKQLSAGSNTSAALSEDGRLFMWGD--NSEGQIGLNDV 177

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS--V 445
           IS  +P +V+    G  IS I CG +H+A +T  G+L+TFG+   G LG       +   
Sbjct: 178 ISVCVPHQVNI---GKPISWISCGYYHSAFVTMDGELYTFGEPESGKLGLPKELLINHRT 234

Query: 446 PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG--- 502
           P+ V  + E K +  +CG  HT  + E             K ++T+G G  GQLG G   
Sbjct: 235 PQLVAGIPE-KVIQVACGGGHTVVLTE-------------KAVYTFGLGQFGQLGLGTFC 280

Query: 503 --DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
               EP+V    ++   +     ++CG + T  ++  G +++ G   +G+LG
Sbjct: 281 FETLEPKV----IEQIKNQKITYISCGENHTALISDIGLMYTFGDGRHGKLG 328



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 41/72 (56%)

Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           ++CG  H AVV+  +++Y +G    GQLG G   + + PT V+AL+ ++V+   CG N T
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSDVKKPTCVKALKPEKVQFAACGRNHT 99

Query: 636 AAICLHKGVSIA 647
             + +   V  A
Sbjct: 100 LILTVVGNVYAA 111



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE--ADVSYPK 340
           + L PKV+E         I+CG  H  L++  G ++++G+G  GKLG G+E  ++  +P 
Sbjct: 282 ETLEPKVIEQIKNQKITYISCGENHTALISDIGLMYTFGDGRHGKLGLGLENFSNQFFPI 341

Query: 341 LIDALNGSNIHMVACG 356
           L        + +VACG
Sbjct: 342 LCSEFLRFTVQLVACG 357


>gi|354465912|ref|XP_003495420.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Cricetulus griseus]
          Length = 1136

 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 168/354 (47%), Gaps = 59/354 (16%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H  +VT   +++ +G  + G+LG G ++ +S P  I AL    + + ACG  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137

Query: 361 CAVTLSGDLYTWGDGIHNLGLLG--------QVSEISHWIPRKVSGQMEGLQISSICCGP 412
              T  G +Y  G   +N G LG           +I  + P+          I  +  G 
Sbjct: 138 LVSTDKGSVYAAGG--NNEGQLGLGDTDDRDTFHQIGFFTPKD--------NIKQLSAGA 187

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
             +AA+T  GKLF +GD + G +G  ++S+  +P EV   K +  +  SCG +H +A V 
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWI--SCGYYH-SAFVT 244

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-------AEPRVVPLCVKVSDDISFCKVA 525
           V G           +L+T+G+   G+LG  +       +  RV+ +  KV       +VA
Sbjct: 245 VDG-----------ELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPEKV------IQVA 287

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACG 579
           CG   T+ LT    V++ G   +GQLG     G F      P  IE  IK + I  I+CG
Sbjct: 288 CGGGHTVVLTDK-VVYAFGLGQFGQLG----LGTFLFETSEPKVIE-RIKDQKISYISCG 341

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
             H A+++    +YT+G G +G+LG G  +  N+  PTL        V+ + CG
Sbjct: 342 ENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFTVQLIACG 395



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 20/218 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F+WG+    G +G           ++ +  +P   E TV      I+CG  H+  VT
Sbjct: 197 GKLFMWGDN-SEGQIG---------LKNKSNVCIPH--EVTVGKPISWISCGYYHSAFVT 244

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
             G+++++GE   GKLG   +  +++  P+ +  +    I  VACG  HT  +T   D  
Sbjct: 245 VDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPEKVIQ-VACGGGHTVVLT---DKV 300

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +  G+   G LG  + +      KV  +++  +IS I CG  HTA +T  G ++TFGDG
Sbjct: 301 VYAFGLGQFGQLGLGTFLFETSEPKVIERIKDQKISYISCGENHTALMTDIGLMYTFGDG 360

Query: 431 TFGALGHGDRSSTS--VPREVETLKELKTVMASCGVWH 466
             G LG G  + T+   P            + +CG  H
Sbjct: 361 RHGKLGLGMENFTNQFFPTLCSNFLRFTVQLIACGGCH 398



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 11/111 (9%)

Query: 252 LGDVFIWGEGLGN-GLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
           L D  ++  GLG  G LG      E S         PKV+E         I+CG  H  L
Sbjct: 296 LTDKVVYAFGLGQFGQLGLGTFLFETSE--------PKVIERIKDQKISYISCGENHTAL 347

Query: 311 VTKQGQIFSWGEGSGGKLGHGVE--ADVSYPKLIDALNGSNIHMVACGEFH 359
           +T  G ++++G+G  GKLG G+E   +  +P L        + ++ACG  H
Sbjct: 348 MTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFTVQLIACGGCH 398



 Score = 49.7 bits (117), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 14/145 (9%)

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG    GQ    +   RV P        I F         ++ +  TG VF+ G   + +
Sbjct: 7   WGPRGLGQYLRPN---RVAPAVFPKQVQIPFKVFGMAEPESL-VPDTGAVFTFGKTKFAE 62

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
                     P++     K+     ++CG  H A+V+  +++Y +G    GQLG G    
Sbjct: 63  --------NIPSKFW--FKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSA 112

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFT 635
              PT ++AL+ ++VK   CG N T
Sbjct: 113 ISKPTCIKALKPEKVKLAACGRNHT 137


>gi|302784100|ref|XP_002973822.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
 gi|300158154|gb|EFJ24777.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
          Length = 413

 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 200/410 (48%), Gaps = 58/410 (14%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           V +WG G   G LG + +G +       + +L + LES    +  S++CG  H +++T +
Sbjct: 30  VALWGNG-DQGRLGLSESGSQF------EPVLCRALESH---EPCSVSCGGAHTLILTDK 79

Query: 315 GQIFSWGEGSGGKLGHGVEADVSY-PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           G++F+ G  S G+LG  ++ + S+ P  +       +H +A G +H+ A+T SG+ Y WG
Sbjct: 80  GRVFATGLNSSGQLGVPLKRESSFDPVEVHGFPDPCVH-IAAGRYHSAAITSSGETYVWG 138

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
                   LG+ ++  +  P+K+   + G+++ ++  G  H+  +   G++ ++G   FG
Sbjct: 139 RNSEGQLGLGKRAKSVYITPQKME-SLAGMRLKALALGTDHSLGLAETGQVLSWGTNRFG 197

Query: 434 ALGHGDR---------SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
            LGHG+          ++   PR +  L++L+    S G+ H+A   +            
Sbjct: 198 CLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQIRSVSAGLVHSACADD------------ 245

Query: 485 SKKLFTWGDGAEGQLGHGD----AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
           S  ++++G G+  QLG G+    ++P  +P   +VS       ++CG   T A+T  G +
Sbjct: 246 SGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLPRVS------SISCGGYHTGAITQDGDI 299

Query: 541 FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
           ++ GS ++G LGS       P R+E ++   ++ +I+CG  H A + S   +++WG G +
Sbjct: 300 YTWGSNEHGCLGSGFRASSKPLRLE-SLAEAFMSEISCGWKHTAAI-SDGYIFSWGWGGS 357

Query: 601 ------------GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
                       GQLG G + +   P  +E         V CG N TAAI
Sbjct: 358 YGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAI 407



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 140/304 (46%), Gaps = 50/304 (16%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+ ++WG     G LG       +    +   + P+ +ES   +  +++A G+ H++ + 
Sbjct: 132 GETYVWGRN-SEGQLG-------LGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLA 183

Query: 313 KQGQIFSWGEGSGGKLGHG---------VEADVSYPKLIDALNGSNIHMVACGEFHTCAV 363
           + GQ+ SWG    G LGHG          + +   P++I  L    I  V+ G  H+   
Sbjct: 184 ETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQIRSVSAGLVHSACA 243

Query: 364 TLSGDLYTWGDG-IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
             SG +Y++G G +  LGL G  ++ S   P       +  ++SSI CG +HT AIT  G
Sbjct: 244 DDSGTIYSFGQGSMCQLGL-GNNNDASQPCPIP-----DLPRVSSISCGGYHTGAITQDG 297

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            ++T+G    G LG G R+S S P  +E+L E      SCG  HTAAI            
Sbjct: 298 DIYTWGSNEHGCLGSGFRAS-SKPLRLESLAEAFMSEISCGWKHTAAI------------ 344

Query: 483 LSSKKLFTWGDGAE------------GQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
            S   +F+WG G              GQLG G       P+ +++ D +S   V+CG + 
Sbjct: 345 -SDGYIFSWGWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNH 403

Query: 531 TIAL 534
           T A+
Sbjct: 404 TAAI 407



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 106/232 (45%), Gaps = 20/232 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V  WG      L  G + G      D  +   P+++     L  +S++ G  H+    
Sbjct: 186 GQVLSWGTNRFGCLGHGEMTGFFDFFKDTNE-YTPRIIHCLEKLQIRSVSAGLVHSACAD 244

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G I+S+G+GS  +LG G   D S P  I  L    +  ++CG +HT A+T  GD+YTW
Sbjct: 245 DSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDL--PRVSSISCGGYHTGAITQDGDIYTW 302

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG---- 428
           G   H  G LG     S   P ++    E   +S I CG  HTAAI S G +F++G    
Sbjct: 303 GSNEH--GCLGSGFRASS-KPLRLESLAEAF-MSEISCGWKHTAAI-SDGYIFSWGWGGS 357

Query: 429 DGTF--------GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
            GT+        G LG G       P  +E    L  +  SCG  HTAAI+E
Sbjct: 358 YGTYATQAESSGGQLGVGTDFDFFEPVPIEMDDRLSALHVSCGFNHTAAILE 409



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 8/170 (4%)

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
           VE++GK         + +  WG+G +G+LG  ++  +  P+  +  +    C V+CG + 
Sbjct: 19  VELSGKAG------KRWVALWGNGDQGRLGLSESGSQFEPVLCRALESHEPCSVSCGGAH 72

Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           T+ LT  G+VF+ G    GQLG P         +E +        IA G YH A ++S  
Sbjct: 73  TLILTDKGRVFATGLNSSGQLGVPLKRESSFDPVEVHGFPDPCVHIAAGRYHSAAITSSG 132

Query: 591 EVYTWGKGANGQLGHGDNENKQ--TPTLVEALRDKQVKSVVCGSNFTAAI 638
           E Y WG+ + GQLG G        TP  +E+L   ++K++  G++ +  +
Sbjct: 133 ETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGL 182


>gi|403355741|gb|EJY77458.1| hypothetical protein OXYTRI_00911 [Oxytricha trifallax]
          Length = 922

 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 124/511 (24%), Positives = 215/511 (42%), Gaps = 106/511 (20%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVE 333
           E++    +DALLP+ +     + A+ I+  + H  ++T+ GQI   G    GKLG    +
Sbjct: 179 ELALGVYKDALLPRFVTGVKGMTAKWISSSNHHTAMITQDGQIVVSGSSLHGKLGIESNK 238

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG--------DGIHNLGLLGQV 385
            +++  +++  L       V+CG++HT  +   G +Y +G        D I+        
Sbjct: 239 TNINKFQIVPTLQRKRAKQVSCGDYHTLVLIEDGTVYQFGGSLFKDKKDKINRP--QNPT 296

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG----TFGALGHGDRS 441
            +I+  +P+ V   + G +I  I CG +H+AA+   G L+T+G G      G  GHG  +
Sbjct: 297 QQIAPNVPQPVQA-LYGREIVQIDCGDFHSAALDGNGDLYTWGGGAPSYNKGQCGHGHNN 355

Query: 442 STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH 501
           +   P +V+ L   + V  +CG +HT A+             S  +L+ +G G  G+ G+
Sbjct: 356 ALEYPEKVKYLSSKRIVKVACGGFHTLALT------------SENELYGFGSGNYGECGN 403

Query: 502 GDAEPRVVPLCVK-----------VSDDI-------------------SFCKVACGHSIT 531
           G+      P  +K           V+DD+                        A G   +
Sbjct: 404 GEFMDTSKPKLIKFPNDHLDTKKNVTDDLEEYGHDEEFVLEMYLKEQPQILDFAAGGRHS 463

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
           + +T  G+++S G    GQLG+                   +   A G  H  +++ + +
Sbjct: 464 LIITNKGRLYSFGYGTNGQLGN-------------------VVQCAAGWNHSMILTERGD 504

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSI 651
           V++ G G +GQLGHGD +++   T V++L +K +  +  G + +  +         D  +
Sbjct: 505 VFSCGYGGHGQLGHGDKDSRTQFTFVQSLGNKNISKIFAGGSHSWVVL--------DSVV 556

Query: 652 CSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTS 711
            +  R+++      HN          L SSKKS         N P R  +D     N+ S
Sbjct: 557 PT--RDKWTAPSPNHN----------LVSSKKSQSN------NTPIRPIND--FGNNSLS 596

Query: 712 ESGSNSQIPRNSS-GLFQNCKRVTEKENMNS 741
           +S       RNS    +QN     E +N NS
Sbjct: 597 QSKGAYNNGRNSGISPYQNKFSANENDNQNS 627



 Score = 70.1 bits (170), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 114/285 (40%), Gaps = 70/285 (24%)

Query: 249 FDGLGDVFIWGEG---LGNGLLG-GAVNGVEISSADRRDALLPKVLESTVVLDAQSIACG 304
            DG GD++ WG G      G  G G  N +E            K L S  ++    +ACG
Sbjct: 328 LDGNGDLYTWGGGAPSYNKGQCGHGHNNALEYPEK-------VKYLSSKRIV---KVACG 377

Query: 305 SKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVT 364
             H + +T + +++ +G G+ G+ G+G   D S PKLI      N H+            
Sbjct: 378 GFHTLALTSENELYGFGSGNYGECGNGEFMDTSKPKLIKF---PNDHL-------DTKKN 427

Query: 365 LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
           ++ DL  +G   H+   +     +  ++        E  QI     G  H+  IT+ G+L
Sbjct: 428 VTDDLEEYG---HDEEFV-----LEMYL-------KEQPQILDFAAGGRHSLIITNKGRL 472

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           ++FG GT G LG+                    V+     W+ + I+   G         
Sbjct: 473 YSFGYGTNGQLGN--------------------VVQCAAGWNHSMILTERG--------- 503

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHS 529
              +F+ G G  GQLGHGD + R     V+   + +  K+  G S
Sbjct: 504 --DVFSCGYGGHGQLGHGDKDSRTQFTFVQSLGNKNISKIFAGGS 546


>gi|328704350|ref|XP_001948518.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Acyrthosiphon pisum]
          Length = 1053

 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 188/410 (45%), Gaps = 44/410 (10%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK-VLESTVVLDAQSIACGSKHAVLVTK 313
           ++ WG  + NG LG  + G+E         L P+ ++    V + +S+ACG+ H + VT+
Sbjct: 1   MYCWGNTI-NGELG--LGGIE-----ENYILSPEEIVNFESVNNIKSVACGNNHTLAVTE 52

Query: 314 QGQIFSWGEGSGGKLGH-GVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            GQ+++ G    G+LGH G    +     +++L  ++   VACGE H+ A+   G LYTW
Sbjct: 53  DGQLYACGSNDFGQLGHDGCRTKLQKIPGVESLVMTS---VACGEAHSMALNEWGQLYTW 109

Query: 373 G-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           G D    LGL  +  E   + P K+   +  + +  I CG  H  A+T+ G+L+T+G   
Sbjct: 110 GSDSCGQLGL--ETDEGIQYKP-KIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNE 166

Query: 432 FGALGHGDRS-STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
           FG LG G    + S P  V +L  L     +CG +H+  + +            S  +F 
Sbjct: 167 FGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSK------------SGAVFG 214

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG    GQLG         P  +K    +    +A G   ++ LT  G VF+ G+  YGQ
Sbjct: 215 WGKNDFGQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQ 274

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG    + +   R    +    +  + CG  H + +V SK  VY++G G+ GQLG   + 
Sbjct: 275 LGHGSFSNEIVPRKVLELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQLGTKSSI 334

Query: 610 NKQTPTLV-------------EALRDKQVKSVVCGSNFTAAICLHKGVSI 646
           N  TP LV             E  +   VKS+  G +       HK + I
Sbjct: 335 NSNTPQLVLGPWLSPSGTSMIETNKQYVVKSIYAGGDQCFVRVTHKSLDI 384


>gi|449456530|ref|XP_004146002.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 463

 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 175/368 (47%), Gaps = 75/368 (20%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA--------------------- 354
           Q+ SWG GS G+LG G+E    YP  +  L+  NIH +A                     
Sbjct: 60  QLLSWGRGSSGQLGGGIEEIRLYPSPVANLSVPNIHNLALAPGQLPSFSGDNQDSGDDGS 119

Query: 355 ------CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSI 408
                 CG FH+ ++ ++G ++ WG G  + G LG   E   ++P  ++ ++E   +  I
Sbjct: 120 FELGISCGLFHS-SLLVNGKVWIWGKG--DGGRLGFGHENPVFVP-TLNSRLE--SVRCI 173

Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE-----TLKELKTVMASCG 463
             G  H+ A+ + G++FT+G G FGALGH       VPR VE      +K + T  A   
Sbjct: 174 ALGGLHSVALNALGQVFTWGYGGFGALGHSVYHRELVPRLVEGSWRGRIKHIATSGA--- 230

Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQL------------GHGDAEP-RVVP 510
             HTAAI E            S +++TWG   EG              G G + P RV  
Sbjct: 231 --HTAAITE------------SGEVYTWGR-DEGDGRLGLGPGRGPNEGGGLSIPCRVRA 275

Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH 570
           L   V+       V+CG   T+AL   G++++ G+    +LG   + G +  +   +++ 
Sbjct: 276 LPAPVA------AVSCGGFFTMALGVDGKLWNWGANTNFELGRGNNIGGWEPKPVPSLED 329

Query: 571 RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
             I  I CG YH  V++   +V +WG G +GQLGH   +N++ P +++AL DK+V  + C
Sbjct: 330 TPIIQIVCGGYHSLVLTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVIYIAC 389

Query: 631 GSNFTAAI 638
             + +AA+
Sbjct: 390 CGSSSAAV 397



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 157/341 (46%), Gaps = 36/341 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+IWG+G G  L  G  N V + + + R       LES      + IA G  H+V + 
Sbjct: 137 GKVWIWGKGDGGRLGFGHENPVFVPTLNSR-------LESV-----RCIALGGLHSVALN 184

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             GQ+F+WG G  G LGH V      P+L++      I  +A    HT A+T SG++YTW
Sbjct: 185 ALGQVFTWGYGGFGALGHSVYHRELVPRLVEGSWRGRIKHIATSGAHTAAITESGEVYTW 244

Query: 373 ----GDGIHNLGLLGQVSEISHW-IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
               GDG   LG     +E     IP +V        ++++ CG + T A+   GKL+ +
Sbjct: 245 GRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPA--PVAAVSCGGFFTMALGVDGKLWNW 302

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           G  T   LG G+      P+ V +L++   +   CG +H+  +                K
Sbjct: 303 GANTNFELGRGNNIGGWEPKPVPSLEDTPIIQIVCGGYHSLVLT------------GDGK 350

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + +WG G  GQLGH   +   VP  +    D     +AC  S + A+TA G+++  G+A 
Sbjct: 351 VLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVIYIACCGSSSAAVTAEGKLYMWGNAK 410

Query: 548 YGQLGSPGSTGKFPTRIEGNIKHRYI-EDIACGSYHIAVVS 587
             QLG PG     P      ++  ++ ED   G YH+  V+
Sbjct: 411 DSQLGVPG----LPEVQTSPVEVIFLTEDDGLGPYHVLSVA 447



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 164/362 (45%), Gaps = 43/362 (11%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+CG  H+ L+   G+++ WG+G GG+LG G E  V  P L   L   ++  +A G  H+
Sbjct: 124 ISCGLFHSSLLV-NGKVWIWGKGDGGRLGFGHENPVFVPTLNSRLE--SVRCIALGGLHS 180

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+   G ++TWG G    G LG        +PR V G   G +I  I     HTAAIT 
Sbjct: 181 VALNALGQVFTWGYG--GFGALGHSVYHRELVPRLVEGSWRG-RIKHIATSGAHTAAITE 237

Query: 421 AGKLFTFG-------DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           +G+++T+G        G     G  +    S+P  V  L        SCG + T A+   
Sbjct: 238 SGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPA-PVAAVSCGGFFTMAL--- 293

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGD----AEPRVVPLCVKVSDDISFCKVACGHS 529
                G +G    KL+ WG     +LG G+     EP+ VP      +D    ++ CG  
Sbjct: 294 -----GVDG----KLWNWGANTNFELGRGNNIGGWEPKPVPSL----EDTPIIQIVCGGY 340

Query: 530 ITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
            ++ LT  G+V S G   +GQLG S     K P  I+     R I    CGS   A V++
Sbjct: 341 HSLVLTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVIYIACCGSSS-AAVTA 399

Query: 589 KSEVYTWGKGANGQLG-HGDNENKQTPTLV------EALRDKQVKSVVCGSNFTAAICLH 641
           + ++Y WG   + QLG  G  E + +P  V      + L    V SV  G++    + L 
Sbjct: 400 EGKLYMWGNAKDSQLGVPGLPEVQTSPVEVIFLTEDDGLGPYHVLSVAVGASHAMCLVLR 459

Query: 642 KG 643
           +G
Sbjct: 460 RG 461


>gi|190610056|gb|ACE79739.1| At5g60870 [Arabidopsis thaliana]
          Length = 376

 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 169/355 (47%), Gaps = 35/355 (9%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+CG  H+ L T  G ++ WG+G GG+LG G E  V  P L       +I  +A G  H+
Sbjct: 37  ISCGLFHSGL-TIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHS 95

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T  GD++TWG G    G LG        +PR+V    +  +IS+I     HTAAIT 
Sbjct: 96  VALTHQGDVFTWGYG--GFGALGHKVYTRELVPRRVDDSWD-CKISAIATSGTHTAAITE 152

Query: 421 AGKLFTFG-------DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           +G+L+ +G        G     G  +    SVP +V+ L  +     SCG + T A+ + 
Sbjct: 153 SGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALT-VPVASVSCGGFFTMALTK- 210

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
                        +L+ WG  +  +LG GD      P+ V   + +   ++ACG   ++A
Sbjct: 211 -----------EGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLA 259

Query: 534 LTATGQVFSMGSADYGQLGSPG-STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
           LT  G+V S G   +GQLGS      K PT IE  +  + I  IA G    A ++   E+
Sbjct: 260 LTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEA-LADKKIVFIASGGSSSAAITDGGEL 318

Query: 593 YTWGKGANGQLG-HGDNENKQTPTLVEALRDK------QVKSVVCGSNFTAAICL 640
           + WG   + QLG  G  E + TP  V  L ++      +V S+  G+  + A+CL
Sbjct: 319 WMWGNAKDFQLGVPGLPEIQTTPVEVNFLTEEDECQPHKVISISIGA--SHALCL 371



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 159/314 (50%), Gaps = 38/314 (12%)

Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
           P  IDA + S    ++CG FH+  +T+ GDL+ WG G  + G LG   E S ++P  ++ 
Sbjct: 23  PGRIDADSSSFRIGISCGLFHS-GLTIDGDLWIWGKG--DGGRLGFGQENSVFVP-NLNP 78

Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK-T 457
             E   I  I  G  H+ A+T  G +FT+G G FGALGH   +   VPR V+   + K +
Sbjct: 79  LFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKIS 138

Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQL------------GHGDAE 505
            +A+ G  HTAAI E            S +L+ WG   EG              G G + 
Sbjct: 139 AIATSGT-HTAAITE------------SGELYMWGR-EEGDGRLGLGPGRGPNEGGGLSV 184

Query: 506 P-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRI 564
           P +V  L V V+       V+CG   T+ALT  GQ+++ G+    +LG   + G +    
Sbjct: 185 PSKVKALTVPVA------SVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMP 238

Query: 565 EGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ 624
             +++   I  IACG YH   ++ + +V +WG G +GQLG     N++ PT +EAL DK+
Sbjct: 239 VPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKK 298

Query: 625 VKSVVCGSNFTAAI 638
           +  +  G + +AAI
Sbjct: 299 IVFIASGGSSSAAI 312



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 182/400 (45%), Gaps = 54/400 (13%)

Query: 206 KSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNG 265
           +S +   + G  DA+S      SFRI +S        G  H      GD++IWG+G G  
Sbjct: 15  QSFSLAQTPGRIDADS-----SSFRIGISC-------GLFHSGLTIDGDLWIWGKGDGGR 62

Query: 266 LLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSG 325
           L  G  N V + +      L P   E ++    + IA G  H+V +T QG +F+WG G  
Sbjct: 63  LGFGQENSVFVPN------LNPLFEEHSI----RCIALGGLHSVALTHQGDVFTWGYGGF 112

Query: 326 GKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW----GDGIHNLGL 381
           G LGH V      P+ +D      I  +A    HT A+T SG+LY W    GDG   LG 
Sbjct: 113 GALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 172

Query: 382 LGQVSE---ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG 438
               +E   +S  +P KV      + ++S+ CG + T A+T  G+L+ +G  +   LG G
Sbjct: 173 GRGPNEGGGLS--VPSKVKALT--VPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRG 228

Query: 439 DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ 498
           D      P  V +L+ ++    +CG +H+ A+ E              K+ +WG G  GQ
Sbjct: 229 DNLGGWEPMPVPSLEGVRITQIACGGYHSLALTE------------EGKVLSWGHGGHGQ 276

Query: 499 LGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG 558
           LG      + VP  ++   D     +A G S + A+T  G+++  G+A   QLG PG   
Sbjct: 277 LGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPE 336

Query: 559 KFPTRIEGNI--------KHRYIEDIACGSYHIAVVSSKS 590
              T +E N          H+ I  I+ G+ H   + S+S
Sbjct: 337 IQTTPVEVNFLTEEDECQPHKVI-SISIGASHALCLVSRS 375


>gi|328704352|ref|XP_003242465.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Acyrthosiphon pisum]
          Length = 893

 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 188/410 (45%), Gaps = 44/410 (10%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK-VLESTVVLDAQSIACGSKHAVLVTK 313
           ++ WG  + NG LG  + G+E         L P+ ++    V + +S+ACG+ H + VT+
Sbjct: 20  MYCWGNTI-NGELG--LGGIE-----ENYILSPEEIVNFESVNNIKSVACGNNHTLAVTE 71

Query: 314 QGQIFSWGEGSGGKLGH-GVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            GQ+++ G    G+LGH G    +     +++L  ++   VACGE H+ A+   G LYTW
Sbjct: 72  DGQLYACGSNDFGQLGHDGCRTKLQKIPGVESLVMTS---VACGEAHSMALNEWGQLYTW 128

Query: 373 G-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           G D    LGL  +  E   + P K+   +  + +  I CG  H  A+T+ G+L+T+G   
Sbjct: 129 GSDSCGQLGL--ETDEGIQYKP-KIVKTLASMLLVQISCGYKHCMALTNHGELYTWGSNE 185

Query: 432 FGALGHGDRS-STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
           FG LG G    + S P  V +L  L     +CG +H+  + +            S  +F 
Sbjct: 186 FGQLGLGLGPGNVSKPTLVNSLVGLPISFIACGGYHSFVVSK------------SGAVFG 233

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG    GQLG         P  +K    +    +A G   ++ LT  G VF+ G+  YGQ
Sbjct: 234 WGKNDFGQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQ 293

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNE 609
           LG    + +   R    +    +  + CG  H + +V SK  VY++G G+ GQLG   + 
Sbjct: 294 LGHGSFSNEIVPRKVLELMGSTVTQVTCGRRHTLTLVPSKGRVYSFGLGSVGQLGTKSSI 353

Query: 610 NKQTPTLV-------------EALRDKQVKSVVCGSNFTAAICLHKGVSI 646
           N  TP LV             E  +   VKS+  G +       HK + I
Sbjct: 354 NSNTPQLVLGPWLSPSGTSMIETNKQYVVKSIYAGGDQCFVRVTHKSLDI 403



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 6/175 (3%)

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV--PLCVKVSDDISFCK-VACG 527
           +E +  T+ + G     ++ WG+   G+LG G  E   +  P  +   + ++  K VACG
Sbjct: 3   IETSHNTTENKGFRRLTMYCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACG 62

Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
           ++ T+A+T  GQ+++ GS D+GQLG  G   K   +I G ++   +  +ACG  H   ++
Sbjct: 63  NNHTLAVTEDGQLYACGSNDFGQLGHDGCRTKL-QKIPG-VESLVMTSVACGEAHSMALN 120

Query: 588 SKSEVYTWGKGANGQLGHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAAICLH 641
              ++YTWG  + GQLG   +E  Q  P +V+ L    +  + CG     A+  H
Sbjct: 121 EWGQLYTWGSDSCGQLGLETDEGIQYKPKIVKTLASMLLVQISCGYKHCMALTNH 175


>gi|403263569|ref|XP_003924096.1| PREDICTED: uncharacterized protein LOC101049856 [Saimiri
           boliviensis boliviensis]
          Length = 1170

 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 173/349 (49%), Gaps = 43/349 (12%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
           A  ++CG +H+ +VT   +++ +G  + G+LG G ++ VS P  + AL    + + ACG 
Sbjct: 37  AVHLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGR 96

Query: 358 FHTCAVTLSGDLY-TWGDGIHNLGLLGQVSE------ISHWIPRKVSGQMEGLQISSICC 410
            HT   T  G++Y T G+    LG LG   E      IS + P+         +I  +  
Sbjct: 97  NHTLVSTEGGNVYATGGNDEGQLG-LGDTEERTTFHLISFFTPQH--------KIKQLSA 147

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
           G   +AA+T  G+LF +GD + G +G  D  +  VP +V T K +  +  SCG +H+A +
Sbjct: 148 GSNTSAALTEDGRLFMWGDNSEGQIGLPDMPNACVPHQVTTGKPVSWI--SCGYYHSAFV 205

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLG---HGDAEPRVVPLCVKVSDDISFCKVACG 527
                 T G       +L+ +G+   G+LG      +  R+  L  ++ + +   +VACG
Sbjct: 206 T-----TDG-------ELYIFGEPENGKLGLPYELLSNHRIPQLVPEIPEKV--IQVACG 251

Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT---RIEGNIKHRYIEDIACGSYHIA 584
              ++ LT    +++ G   +GQLG    T  F T   R+  +IK R I  I+CG  H A
Sbjct: 252 GEHSVVLTEN-DLYTFGLGKFGQLGL--GTFLFETSEPRVVESIKGRKISYISCGENHAA 308

Query: 585 VVSSKSEVYTWGKGANGQLG--HGDNENKQTPTLVEALRDKQVKSVVCG 631
           +++    +YT+G G +G+LG    +  N+  P L   L   +VK V CG
Sbjct: 309 LLTDTGLMYTFGDGRHGKLGLELENFTNQFIPILCSYLLKYKVKLVACG 357



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 10/102 (9%)

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
           +  +G VF  G + + +     + GKF        K+     ++CG  H AVV+  +++Y
Sbjct: 8   MPDSGAVFVFGKSKFTE----NTPGKF------WFKNDVAVHLSCGDEHSAVVTGNNKLY 57

Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
            +G    GQLG G       PT V+AL+ ++VK   CG N T
Sbjct: 58  VFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE--ADVSYPKLIDA 344
           P+V+ES        I+CG  HA L+T  G ++++G+G  GKLG  +E   +   P L   
Sbjct: 286 PRVVESIKGRKISYISCGENHAALLTDTGLMYTFGDGRHGKLGLELENFTNQFIPILCSY 345

Query: 345 LNGSNIHMVACGEFH 359
           L    + +VACG  H
Sbjct: 346 LLKYKVKLVACGGCH 360


>gi|18073943|emb|CAC86116.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
          Length = 815

 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 175/358 (48%), Gaps = 38/358 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H+ +VT   +++ +G  + G+LG G ++ +S P  + AL    + + ACG  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 361 CAVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
              T  G++Y T G+    LG LG   E + +    +S      +I  +  G   +AA+T
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG-LGDTEERNTF--HVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G+LF +GD + G +G  + S+  VP++V     +  +  SCG +H+A +      T G
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGNPVSWI--SCGYYHSAFVT-----TDG 209

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
                  +L+ +G+   G+LG  +      R   L  ++ + +   +VACG   T+ LT 
Sbjct: 210 -------ELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV--IQVACGGEHTVVLTE 260

Query: 537 TGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
              V++ G   +GQLG     G F      P  IE NI+ + I  I+CG  H A+++   
Sbjct: 261 NA-VYTFGLGQFGQLG----LGTFLFETSEPKVIE-NIRDQTISYISCGENHTALITDIG 314

Query: 591 EVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCGS-NFTAAICLHKGVS 645
            +YT+G G +G+LG G  +  N   PTL        VK V CG  +       H+GV+
Sbjct: 315 LMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAPHRGVA 372



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDA 344
           PKV+E+        I+CG  H  L+T  G ++++G+G  GKLG G+E   ++  P L   
Sbjct: 286 PKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSN 345

Query: 345 LNGSNIHMVACGEFH 359
                + +VACG  H
Sbjct: 346 FLRFIVKLVACGGCH 360


>gi|332243760|ref|XP_003271040.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Nomascus
           leucogenys]
          Length = 814

 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 170/343 (49%), Gaps = 37/343 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H+ +VT   +++ +G  + G+LG G ++ VS P  + AL    + + ACG  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99

Query: 361 CAVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
              T  G++Y T G+    LG LG   E + +    +S      +I  +  G   +AA+T
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG-LGDTEERNTF--HVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G+LF +GD + G +G  + ++  VP++V   K +  +  SCG +H+A +      T G
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVTNVCVPQQVTIGKPVSWI--SCGYYHSAFVT-----TDG 209

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
                  +L+ +G+   G+LG  +      R   L  ++ + +   +VACG   T+ LT 
Sbjct: 210 -------ELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV--IQVACGGEHTVVLTE 260

Query: 537 TGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
              V++ G   +GQLG     G F      P  IE NI+ + I  I+CG  H A+++   
Sbjct: 261 NA-VYTFGLGQFGQLG----LGTFLFETSDPKVIE-NIRDQTISYISCGESHTALITDIG 314

Query: 591 EVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
            +YT+G G +G+LG G  +  N   PTL        VK V CG
Sbjct: 315 LMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFSRFIVKLVACG 357



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 142/327 (43%), Gaps = 64/327 (19%)

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
           + CG  H+A +T   KL+ FG   +G LG G +S+ S P  V+ LK  K  +A+CG  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99

Query: 468 AAIVE------VAGKTSGSNGLSSK----------------------------------- 486
               E        G   G  GL                                      
Sbjct: 100 LVSTEGGNVYATGGNNEGQLGLGDTEERNTFHVISFFTSEHKIKQLSAGSNTSAALTEDG 159

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           +LF WGD +EGQ+G  +     VP  V +   +S+  ++CG+  +  +T  G+++  G  
Sbjct: 160 RLFMWGDNSEGQIGLKNVTNVCVPQQVTIGKPVSW--ISCGYYHSAFVTTDGELYVFGEP 217

Query: 547 DYGQLGSPGST-GKFPT-RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
           + G+LG P    G   T ++   I  + I+ +ACG  H  VV +++ VYT+G G  GQLG
Sbjct: 218 ENGKLGLPNQLLGNHRTPQLVSEIPEKVIQ-VACGGEH-TVVLTENAVYTFGLGQFGQLG 275

Query: 605 HGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAAIC---------------LHKGV-SIA 647
            G    + + P ++E +RD+ +  + CG + TA I                L  G+ +  
Sbjct: 276 LGTFLFETSDPKVIENIRDQTISYISCGESHTALITDIGLMYTFGDGRHGKLGLGLENFT 335

Query: 648 DHSICSGCRNQFNFRRRRHNCYNCGLV 674
           +H I + C N   F  +   C  C +V
Sbjct: 336 NHFIPTLCSNFSRFIVKLVACGGCHMV 362



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 10/102 (9%)

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
           +  +G VF+ G + + +     + GKF        K+     ++CG  H AVV+  +++Y
Sbjct: 8   MPDSGAVFTFGKSKFAE----DNPGKFW------FKNDVPVHLSCGDEHSAVVTGNNKLY 57

Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
            +G    GQLG G       PT V+AL+ ++VK   CG N T
Sbjct: 58  MFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99



 Score = 48.9 bits (115), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDA 344
           PKV+E+        I+CG  H  L+T  G ++++G+G  GKLG G+E   ++  P L   
Sbjct: 286 PKVIENIRDQTISYISCGESHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSN 345

Query: 345 LNGSNIHMVACGEFH 359
            +   + +VACG  H
Sbjct: 346 FSRFIVKLVACGGCH 360


>gi|345323514|ref|XP_003430715.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Ornithorhynchus anatinus]
          Length = 806

 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 162/339 (47%), Gaps = 29/339 (8%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H   VT   +++  G  + G+LG G +  V+ P  + AL    +   ACG  HT
Sbjct: 126 LSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKFAACGRNHT 185

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
              T  G++Y  G        LG   E + +   ++S      +I  +  G   +AA+T 
Sbjct: 186 LVCTEGGNVYAAGGNSDGQLGLGDTEERTTF--HQISFFTSRYKIKQLSAGSNTSAALTE 243

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            G+L+ +GD + G +G    S+  VP  V   K +  V  SCG +H+A +      T G 
Sbjct: 244 DGELYMWGDNSEGQIGLASESNVCVPCRVVIGKPVSWV--SCGYYHSALVT-----TDG- 295

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAE---PRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
                 +L+T+G+   G+LG    +    R+  L   +S  ++  +VACG   T+ALT  
Sbjct: 296 ------ELYTFGEPENGKLGLSSEQLKNHRIPQLVPGISGKVN--QVACGGGHTVALTEE 347

Query: 538 GQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH---RYIEDIACGSYHIAVVSSKSEVYT 594
             V++ G  ++GQLG    T  F T +   ++H   + I  +ACG  H A++S    +YT
Sbjct: 348 -DVYTFGLGEFGQLGL--GTCIFETSVPKVVEHLRKQKIHYVACGENHTALISDTGLMYT 404

Query: 595 WGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCG 631
           +G G +G+LG G+    N+  PTL        V  V CG
Sbjct: 405 FGDGRHGKLGLGEENFTNQFIPTLCSNFLRFSVHLVACG 443



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 136/318 (42%), Gaps = 63/318 (19%)

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
           SG ++T+G            S+ +  IP K    +    ++ + CG  HTA +T   KL+
Sbjct: 97  SGAVFTFGK-----------SKFAENIPSKF--WLRNDTLAQLSCGDEHTAFVTGNSKLY 143

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE------VAGKTSG 479
             G   +G LG G +++ + P  V+ LK  K   A+CG  HT    E        G + G
Sbjct: 144 MLGSNNWGQLGLGSKTTVNKPTCVKALKPEKVKFAACGRNHTLVCTEGGNVYAAGGNSDG 203

Query: 480 SNGLSSKK-----------------------------------LFTWGDGAEGQLGHGDA 504
             GL   +                                   L+ WGD +EGQ+G    
Sbjct: 204 QLGLGDTEERTTFHQISFFTSRYKIKQLSAGSNTSAALTEDGELYMWGDNSEGQIGLASE 263

Query: 505 EPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGS---TGKFP 561
               VP  V +   +S+  V+CG+  +  +T  G++++ G  + G+LG         + P
Sbjct: 264 SNVCVPCRVVIGKPVSW--VSCGYYHSALVTTDGELYTFGEPENGKLGLSSEQLKNHRIP 321

Query: 562 TRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD-NENKQTPTLVEAL 620
             + G I  + +  +ACG  H  V  ++ +VYT+G G  GQLG G        P +VE L
Sbjct: 322 QLVPG-ISGK-VNQVACGGGH-TVALTEEDVYTFGLGEFGQLGLGTCIFETSVPKVVEHL 378

Query: 621 RDKQVKSVVCGSNFTAAI 638
           R +++  V CG N TA I
Sbjct: 379 RKQKIHYVACGENHTALI 396



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 29/221 (13%)

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIAC 578
           +  +++CG   T  +T   +++ +GS ++GQLG    +T   PT ++  +K   ++  AC
Sbjct: 122 TLAQLSCGDEHTAFVTGNSKLYMLGSNNWGQLGLGSKTTVNKPTCVKA-LKPEKVKFAAC 180

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDK-QVKSVVCGSNFTAA 637
           G  H  V +    VY  G  ++GQLG GD E + T   +     + ++K +  GSN +AA
Sbjct: 181 GRNHTLVCTEGGNVYAAGGNSDGQLGLGDTEERTTFHQISFFTSRYKIKQLSAGSNTSAA 240

Query: 638 ICLHKGVSI------------ADHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSM 685
           +     + +            ++ ++C  CR       +  +  +CG  +  L ++   +
Sbjct: 241 LTEDGELYMWGDNSEGQIGLASESNVCVPCRVVIG---KPVSWVSCGYYHSALVTTDGEL 297

Query: 686 KTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRNSSGL 726
            T   PE             KL  +SE   N +IP+   G+
Sbjct: 298 YTFGEPENG-----------KLGLSSEQLKNHRIPQLVPGI 327



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 11/107 (10%)

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           +G VF+ G + + +          P++    +++  +  ++CG  H A V+  S++Y  G
Sbjct: 97  SGAVFTFGKSKFAE--------NIPSKFW--LRNDTLAQLSCGDEHTAFVTGNSKLYMLG 146

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
               GQLG G       PT V+AL+ ++VK   CG N T  +C   G
Sbjct: 147 SNNWGQLGLGSKTTVNKPTCVKALKPEKVKFAACGRNHT-LVCTEGG 192



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE--ADVSYPKLID 343
           +PKV+E         +ACG  H  L++  G ++++G+G  GKLG G E   +   P L  
Sbjct: 371 VPKVVEHLRKQKIHYVACGENHTALISDTGLMYTFGDGRHGKLGLGEENFTNQFIPTLCS 430

Query: 344 ALNGSNIHMVACGEFHTCAVTL 365
                ++H+VACG  H     +
Sbjct: 431 NFLRFSVHLVACGGCHMLVFAI 452


>gi|390479661|ref|XP_002762827.2| PREDICTED: LOW QUALITY PROTEIN: X-linked retinitis pigmentosa
           GTPase regulator, partial [Callithrix jacchus]
          Length = 817

 Score =  132 bits (332), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 174/343 (50%), Gaps = 31/343 (9%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
           A  ++CG +H+ +VT   +++ +G  + G+LG G ++ VS P  + AL    + + ACG 
Sbjct: 37  AVHLSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGR 96

Query: 358 FHTCAVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            HT   T  G++Y T G+    LG LG   E + +   +VS      +I  +  G   +A
Sbjct: 97  NHTLVSTEGGNVYATGGNDEGQLG-LGDTEERTTF--HRVSFFTSQHKIKQLSAGSNTSA 153

Query: 417 AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           A+T  G+LF +GD + G +G  +  +  VP +V   K +  +  SCG +H+A +      
Sbjct: 154 ALTEDGRLFMWGDNSEGQIGLPNILNACVPHQVTIGKPVSWI--SCGYYHSAFVT----- 206

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCKVACGHSITIA 533
           T G       +L+ +G+   G+LG  +   +  R+  L  ++ + +   +VACG   ++ 
Sbjct: 207 TDG-------ELYIFGESENGKLGLPNELLSNHRIPQLVPEIPEKV--IQVACGGEHSVV 257

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKFPT---RIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           LT    V++ G   +GQLG    T  F T   ++  NI ++ I  I+CG  H A+++   
Sbjct: 258 LTEDA-VYTFGLGQFGQLGL--GTLLFETSEPKVVENIGNKTISYISCGENHAALLTDNG 314

Query: 591 EVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
            +YT+G G +G+LG G  +  N+ TPTL        VK V CG
Sbjct: 315 LMYTFGDGRHGKLGLGLENFTNQFTPTLCCNFLKFVVKLVACG 357



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 35/60 (58%)

Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           ++CG  H AVV+  +++Y +G    GQLG G       PT V+AL+ ++VK   CG N T
Sbjct: 40  LSCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHT 99



 Score = 47.0 bits (110), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE--ADVSYPKLIDA 344
           PKV+E+        I+CG  HA L+T  G ++++G+G  GKLG G+E   +   P L   
Sbjct: 286 PKVVENIGNKTISYISCGENHAALLTDNGLMYTFGDGRHGKLGLGLENFTNQFTPTLCCN 345

Query: 345 LNGSNIHMVACGEFH 359
                + +VACG  H
Sbjct: 346 FLKFVVKLVACGGCH 360


>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
 gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
          Length = 727

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 165/344 (47%), Gaps = 39/344 (11%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+CG +H VLVT  G+++ +G  + G+LG    + +S P  + AL    +   +CG  HT
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHT 101

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
              T  G LY+ G        LG  S  + +  +++S      +I  +  G   +AA+T 
Sbjct: 102 LLYTEQGKLYSSGGNSEGQLGLGDTSGRTSF--QEISFFNTQYKIKQLSAGSNTSAALTV 159

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            GKLF +GD + G LG    +  S P++++  K +  +  SCG +H+A + +        
Sbjct: 160 DGKLFMWGDNSEGQLGLEKEAIYSTPQKIDIGKPISWI--SCGYYHSAFVTQDG------ 211

Query: 481 NGLSSKKLFTWGDGAEGQLG--------HGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
                 +L+T+G+   G+LG        H   + RV  L  KV        V+CG   TI
Sbjct: 212 ------ELYTFGEPENGKLGLPSDKLKKHKKPQ-RVSGLSGKVK------IVSCGGEHTI 258

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIK---HRYIEDIACGSYHIAVVSSK 589
           A+T   +V++ G   +GQLG    T  F T++   +     + I  + CG  H AV++ K
Sbjct: 259 AVTEK-EVYTFGLGQFGQLGH--GTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDK 315

Query: 590 SEVYTWGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCG 631
             +YT+G G +G+LG G+    N+  P L        V+SV CG
Sbjct: 316 GLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACG 359



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 138/290 (47%), Gaps = 23/290 (7%)

Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
           ++CG+ HT  VT +G LY +G   +N G LG  +  +   P  V   ++  ++    CG 
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGS--NNWGQLGLEAGSAISKPTCVKA-LKSEKVVFASCGR 98

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
            HT   T  GKL++ G  + G LG GD S  +  +E+        +       +T+A + 
Sbjct: 99  NHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALT 158

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
           V GK           LF WGD +EGQLG         P  + +   IS+  ++CG+  + 
Sbjct: 159 VDGK-----------LFMWGDNSEGQLGLEKEAIYSTPQKIDIGKPISW--ISCGYYHSA 205

Query: 533 ALTATGQVFSMGSADYGQLGSPGST---GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
            +T  G++++ G  + G+LG P       K P R+ G      ++ ++CG  H   V+ K
Sbjct: 206 FVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSG--LSGKVKIVSCGGEHTIAVTEK 263

Query: 590 SEVYTWGKGANGQLGHGDN-ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            EVYT+G G  GQLGHG      Q P  V+ L  K +  V CG N TA I
Sbjct: 264 -EVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVI 312



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 127/242 (52%), Gaps = 26/242 (10%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + ++ GS  +  +T  G++F WG+ S G+LG   EA  S P+ ID   G  I  ++CG +
Sbjct: 145 KQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDI--GKPISWISCGYY 202

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSE--ISHWIPRKVSGQMEGLQISSICCGPWHTA 416
           H+  VT  G+LYT+G+  +  G LG  S+    H  P++VSG    ++I  + CG  HT 
Sbjct: 203 HSAFVTQDGELYTFGEPEN--GKLGLPSDKLKKHKKPQRVSGLSGKVKI--VSCGGEHTI 258

Query: 417 AITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+T   +++TFG G FG LGHG     T +P+ V+ L +   +  +CG  HTA I +   
Sbjct: 259 AVTEK-EVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITD--- 314

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAE--PRVVPLCVKVSDDISFCKVACG--HSIT 531
                 GL    L+T+GDG  G+LG G+     + VP+        +   VACG  H + 
Sbjct: 315 -----KGL----LYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHMLV 365

Query: 532 IA 533
            A
Sbjct: 366 FA 367


>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
          Length = 727

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 165/344 (47%), Gaps = 39/344 (11%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+CG +H VLVT  G+++ +G  + G+LG    + +S P  + AL    +   +CG  HT
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHT 101

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
              T  G LY+ G        LG  S  + +  +++S      +I  +  G   +AA+T 
Sbjct: 102 LLYTEQGKLYSSGGNSEGQLGLGDTSGRTSF--QEISFFNTQYKIKQLSAGSNTSAALTV 159

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            GKLF +GD + G LG    +  S P++++  K +  +  SCG +H+A + +        
Sbjct: 160 DGKLFMWGDNSEGQLGLEKEAIYSTPQKIDIGKPISWI--SCGYYHSAFVTQDG------ 211

Query: 481 NGLSSKKLFTWGDGAEGQLG--------HGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
                 +L+T+G+   G+LG        H   + RV  L  KV        V+CG   TI
Sbjct: 212 ------ELYTFGEPENGKLGLPSDKLKKHKKPQ-RVSGLSGKVK------IVSCGGEHTI 258

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIK---HRYIEDIACGSYHIAVVSSK 589
           A+T   +V++ G   +GQLG    T  F T++   +     + I  + CG  H AV++ K
Sbjct: 259 AVTEK-EVYTFGLGQFGQLGH--GTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITDK 315

Query: 590 SEVYTWGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCG 631
             +YT+G G +G+LG G+    N+  P L        V+SV CG
Sbjct: 316 GLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACG 359



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 138/290 (47%), Gaps = 23/290 (7%)

Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
           ++CG+ HT  VT +G LY +G   +N G LG  +  +   P  V   ++  ++    CG 
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGS--NNWGQLGLEAGSAISKPTCVKA-LKSEKVVFASCGR 98

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
            HT   T  GKL++ G  + G LG GD S  +  +E+        +       +T+A + 
Sbjct: 99  NHTLLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALT 158

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
           V GK           LF WGD +EGQLG         P  + +   IS+  ++CG+  + 
Sbjct: 159 VDGK-----------LFMWGDNSEGQLGLEKEAIYSTPQKIDIGKPISW--ISCGYYHSA 205

Query: 533 ALTATGQVFSMGSADYGQLGSPGST---GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
            +T  G++++ G  + G+LG P       K P R+ G      ++ ++CG  H   V+ K
Sbjct: 206 FVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSG--LSGKVKIVSCGGEHTIAVTEK 263

Query: 590 SEVYTWGKGANGQLGHGDN-ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            EVYT+G G  GQLGHG      Q P  V+ L  K +  V CG N TA I
Sbjct: 264 -EVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVI 312



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 127/242 (52%), Gaps = 26/242 (10%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + ++ GS  +  +T  G++F WG+ S G+LG   EA  S P+ ID   G  I  ++CG +
Sbjct: 145 KQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDI--GKPISWISCGYY 202

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSE--ISHWIPRKVSGQMEGLQISSICCGPWHTA 416
           H+  VT  G+LYT+G+  +  G LG  S+    H  P++VSG    ++I  + CG  HT 
Sbjct: 203 HSAFVTQDGELYTFGEPEN--GKLGLPSDKLKKHKKPQRVSGLSGKVKI--VSCGGEHTI 258

Query: 417 AITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A+T   +++TFG G FG LGHG     T +P+ V+ L +   +  +CG  HTA I +   
Sbjct: 259 AVTEK-EVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTILYVTCGENHTAVITD--- 314

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAE--PRVVPLCVKVSDDISFCKVACG--HSIT 531
                 GL    L+T+GDG  G+LG G+     + VP+        +   VACG  H + 
Sbjct: 315 -----KGL----LYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCHMLV 365

Query: 532 IA 533
            A
Sbjct: 366 FA 367


>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 166/349 (47%), Gaps = 39/349 (11%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDA 344
           LP+ +++   L+   ++CG +H++ V  +G++F+WG GS G+LG G   ++S+ PK I  
Sbjct: 65  LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGL 403
           LNG  I  V+CG +H+ A++    +++WG   H  G LG   E+ S   P++V   +EG+
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEVPSQASPQRVRS-LEGI 181

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS---STSVPREVETLKELKTVMA 460
            ++ +  G  H+ A++  G  F +G  + G L    R+    ++ P  +  LK L  +  
Sbjct: 182 PLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYI 241

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
           SCG  HTA +++              K+FT+GD + GQLG+     +  P  V+  D + 
Sbjct: 242 SCGDEHTAVLIQ------------DGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGL- 288

Query: 521 FCKVACGHSITIALT-ATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIA 577
             ++ CG   T+A    TGQV S G         P  T K   P  + GN       DI 
Sbjct: 289 VSQIDCGSYHTLAYVHTTGQVISFGHG-------PSDTSKPTHPEALTGNF------DIR 335

Query: 578 CGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP--TLVEALRDKQ 624
           C      +V  + +    G  AN    H D  +   P  TL E  R  Q
Sbjct: 336 CLISAEDLVDVQVKHIFAGTYANFVTTHQDTSSTSAPGKTLPEISRISQ 384



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 169/351 (48%), Gaps = 36/351 (10%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G +H++L+    ++ S G+ S G+LG         P+ I AL   N+ +V+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSL 88

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV   G ++ WG G      +G+  EIS + P+K++  + G++I  + CG +H+ A++  
Sbjct: 89  AVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIT-TLNGIKIIQVSCGHYHSLALSKD 146

Query: 422 GKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            ++F++G  + G LG G +  S + P+ V +L+ +     + G  H+ A+  + G +   
Sbjct: 147 SQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-SLCGTS--- 202

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVV---PLCVKVSDDISFCKVACGHSITIALTAT 537
                   F WG  + GQL        V    PL +    ++    ++CG   T  L   
Sbjct: 203 --------FGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQD 254

Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPT---RIEGNIKHRYIEDIACGSYH-IAVVSSKSEV 592
           G+VF+ G    GQLG SP    + P    RI+G      +  I CGSYH +A V +  +V
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQV 309

Query: 593 YTWGKGAN--GQLGHGD----NENKQTPTLVEALRDKQVKSVVCGS--NFT 635
            ++G G +   +  H +    N + +     E L D QVK +  G+  NF 
Sbjct: 310 ISFGHGPSDTSKPTHPEALTGNFDIRCLISAEDLVDVQVKHIFAGTYANFV 360



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 115/255 (45%), Gaps = 23/255 (9%)

Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
           + R+ + +  G ++     G  H+  + +  ++ + GD + G LG        +P  ++ 
Sbjct: 12  LQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQA 71

Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVP 510
           L+ L   + SCG  H+ A+                ++F WG G+EGQLG G+  E    P
Sbjct: 72  LETLNVDLVSCGKEHSLAVCH------------KGRVFAWGAGSEGQLGIGEFKEISFTP 119

Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG----SPGSTGKFPTRIEG 566
             +   + I   +V+CGH  ++AL+   QVFS G   +GQLG     P      P R+  
Sbjct: 120 KKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQAS--PQRVR- 176

Query: 567 NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG-HGDNENKQT--PTLVEALRDK 623
           +++   +  +A G  H   +S     + WG  + GQL   G N   Q+  P  + AL++ 
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNL 236

Query: 624 QVKSVVCGSNFTAAI 638
            V  + CG   TA +
Sbjct: 237 GVIYISCGDEHTAVL 251


>gi|171847108|gb|AAI62028.1| Rpgr protein [Rattus norvegicus]
          Length = 677

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 168/351 (47%), Gaps = 53/351 (15%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H  +VT   +++ +G  + G+LG G ++ +S P  I AL    + + ACG  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137

Query: 361 CAVTLSGDLYTWGDGIHNLGLLG--------QVSEISHWIPRKVSGQMEGLQISSICCGP 412
              T +G +Y  G   +N G LG           +I  + P  +        I  +  G 
Sbjct: 138 LVSTDTGGVYAAGG--NNEGQLGLGDTDDRDTFHQIGFFTPSDI--------IKQLSAGA 187

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
             +AA+T  GKLF +GD + G +G  ++S+  +P EV   K +  +  SCG +H+A +  
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT- 244

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-------AEPRVVPLCVKVSDDISFCKVA 525
                      +  +L+T+G+   G+LG  +       +  RV+ +  KV       +VA
Sbjct: 245 -----------TDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKV------IQVA 287

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT---RIEGNIKHRYIEDIACGSYH 582
           CG   T+ LT    V++ G   +GQLG    T  F T   +I   IK + I  I+CG  H
Sbjct: 288 CGGGHTVVLTEK-VVYAFGLGQFGQLGL--GTFLFETSEPKIIDRIKDQKISHISCGENH 344

Query: 583 IAVVSSKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
            A+++    +YT+G G +G+LG G  +  N+  PTL        V+ + CG
Sbjct: 345 TALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACG 395



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 20/218 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F+WG+           +  +I   ++ +  +P   E TV      I+CG  H+  VT
Sbjct: 197 GKLFMWGDN----------SEGQIGLKNKSNVCIPH--EVTVGKPISWISCGYYHSAFVT 244

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
             G+++++GE   GKLG   +  +++  P+ +  +    I  VACG  HT  +T   +  
Sbjct: 245 TDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKVIQ-VACGGGHTVVLT---EKV 300

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +  G+   G LG  + +      K+  +++  +IS I CG  HTA +T  G ++TFGDG
Sbjct: 301 VYAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALMTDIGLMYTFGDG 360

Query: 431 TFGALGHGDRSSTS--VPREVETLKELKTVMASCGVWH 466
             G LG G  + T+   P       +    + +CG  H
Sbjct: 361 RHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGCH 398



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 14/145 (9%)

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG G  GQ    +   RV P        I F         ++ +  TG VF+ G   + +
Sbjct: 7   WGTGGLGQYLRPN---RVAPAVFPKQAQIPFAAFGMAEPESL-VPDTGAVFTFGKTKFAE 62

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
                     P++     K+     ++CG  H A+V+  +++Y +G    GQLG G    
Sbjct: 63  --------NIPSKFW--FKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSA 112

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFT 635
              PT ++AL+ ++VK   CG N T
Sbjct: 113 ISKPTCIKALKPEKVKLAACGRNHT 137


>gi|449518441|ref|XP_004166250.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 463

 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 174/368 (47%), Gaps = 75/368 (20%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA--------------------- 354
           Q+ SWG GS G+LG G+E    YP  +  L+  NIH +A                     
Sbjct: 60  QLLSWGRGSSGQLGGGIEEIRLYPSPVANLSVPNIHTLALAPGQLPSFSGDNQDSGDDGS 119

Query: 355 ------CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSI 408
                 CG FH+ ++ ++G ++ WG G  + G LG   E   ++P  ++ ++E   +  I
Sbjct: 120 FELGISCGLFHS-SLLVNGKVWIWGKG--DGGRLGFGHENPVFVP-TLNSRLE--SVRCI 173

Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-----LKELKTVMASCG 463
             G  H+ A+ + G++FT+G G FGALGH       VPR VE      +K + T  A   
Sbjct: 174 ALGGLHSVALNALGQVFTWGYGGFGALGHSVYHRELVPRLVEGSWRGRIKHIATSGA--- 230

Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQL------------GHGDAEP-RVVP 510
             HTAAI E            S +++TWG   EG              G G + P RV  
Sbjct: 231 --HTAAITE------------SGEVYTWGR-DEGDGRLGLGPGRGPNEGGGLSIPCRVRA 275

Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH 570
           L   V+       V+CG   T+AL   G++++ G+    +LG   + G +  +   +++ 
Sbjct: 276 LPAPVA------AVSCGGFFTMALGVDGKLWNWGANTNFELGRGNNIGGWEPKPVPSLED 329

Query: 571 RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
             I  I CG YH   ++   +V +WG G +GQLGH   +N++ P +++AL DK+V  + C
Sbjct: 330 TPIIQIVCGGYHSLALTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVSYIAC 389

Query: 631 GSNFTAAI 638
             + +AA+
Sbjct: 390 CGSSSAAV 397



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 158/341 (46%), Gaps = 36/341 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+IWG+G G  L  G  N V + + + R       LES      + IA G  H+V + 
Sbjct: 137 GKVWIWGKGDGGRLGFGHENPVFVPTLNSR-------LESV-----RCIALGGLHSVALN 184

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             GQ+F+WG G  G LGH V      P+L++      I  +A    HT A+T SG++YTW
Sbjct: 185 ALGQVFTWGYGGFGALGHSVYHRELVPRLVEGSWRGRIKHIATSGAHTAAITESGEVYTW 244

Query: 373 ----GDGIHNLGLLGQVSEISHW-IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
               GDG   LG     +E     IP +V        ++++ CG + T A+   GKL+ +
Sbjct: 245 GRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPA--PVAAVSCGGFFTMALGVDGKLWNW 302

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           G  T   LG G+      P+ V +L++   +   CG +H+ A+                K
Sbjct: 303 GANTNFELGRGNNIGGWEPKPVPSLEDTPIIQIVCGGYHSLALT------------GDGK 350

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + +WG G  GQLGH   +   VP  +    D     +AC  S + A+TA G+++  G+A 
Sbjct: 351 VLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVSYIACCGSSSAAVTAEGKLYMWGNAK 410

Query: 548 YGQLGSPGSTGKFPTRIEGNIKHRYI-EDIACGSYHIAVVS 587
             QLG PG     P      ++  ++ ED   G YH+  V+
Sbjct: 411 DSQLGVPG----LPEVQTSPVEVIFLTEDDGLGPYHVLSVA 447



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 164/361 (45%), Gaps = 41/361 (11%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+CG  H+ L+   G+++ WG+G GG+LG G E  V  P L   L   ++  +A G  H+
Sbjct: 124 ISCGLFHSSLLV-NGKVWIWGKGDGGRLGFGHENPVFVPTLNSRLE--SVRCIALGGLHS 180

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+   G ++TWG G    G LG        +PR V G   G +I  I     HTAAIT 
Sbjct: 181 VALNALGQVFTWGYG--GFGALGHSVYHRELVPRLVEGSWRG-RIKHIATSGAHTAAITE 237

Query: 421 AGKLFTFG-------DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           +G+++T+G        G     G  +    S+P  V  L        SCG + T A+   
Sbjct: 238 SGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPA-PVAAVSCGGFFTMAL--- 293

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGD----AEPRVVPLCVKVSDDISFCKVACGHS 529
                G +G    KL+ WG     +LG G+     EP+ VP      +D    ++ CG  
Sbjct: 294 -----GVDG----KLWNWGANTNFELGRGNNIGGWEPKPVPSL----EDTPIIQIVCGGY 340

Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
            ++ALT  G+V S G   +GQLG      +   R+   +  + +  IAC     A V+++
Sbjct: 341 HSLALTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVSYIACCGSSSAAVTAE 400

Query: 590 SEVYTWGKGANGQLG-HGDNENKQTPTLV------EALRDKQVKSVVCGSNFTAAICLHK 642
            ++Y WG   + QLG  G  E + +P  V      + L    V SV  G++    + L +
Sbjct: 401 GKLYMWGNAKDSQLGVPGLPEVQTSPVEVIFLTEDDGLGPYHVLSVAVGASHAMCLVLRR 460

Query: 643 G 643
           G
Sbjct: 461 G 461


>gi|255539128|ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
           communis]
 gi|223551330|gb|EEF52816.1| guanine nucleotide exchange factor P532, putative [Ricinus
           communis]
          Length = 450

 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 157/319 (49%), Gaps = 33/319 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLD-AQSIACGSKHAVLV 311
           G+++IWG+G G  L  G  N V + + +               LD A+ +A G  H+V +
Sbjct: 125 GNIWIWGKGDGGRLGFGHENPVFVPTLNPN-------------LDPAKCVALGGVHSVAL 171

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           T  GQ+F+WG G  G LGH V      P+L+  ++   I  +A    HT A+T +G++YT
Sbjct: 172 TSLGQVFTWGYGGFGALGHCVYHRELLPRLVQGISNEKIRHIATSGTHTAAITETGEVYT 231

Query: 372 W----GDGIHNLGLLGQVSEISHW-IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
           W    GDG   LG     +E     IP KV      + ++++ CG + TA +T  G+++ 
Sbjct: 232 WGRDEGDGRLGLGPGRGPNEGGGLSIPSKVKALT--VPVAAVFCGGFFTAVLTEEGQIWN 289

Query: 427 FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
           +G  +   LG G+++    P+ +  L+ ++ +  + G +H+ A+ +              
Sbjct: 290 WGANSNYELGRGNKTGGWQPKPIPNLEGVRVIQIASGGYHSLALTD------------EG 337

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
           K+ +WG G  GQLGH   + + +P+ +    D     +ACG S + A+T  G+++  G+A
Sbjct: 338 KVLSWGFGGHGQLGHPSIQNQKIPMVIDALADQRVVYIACGGSTSAAITDEGKLYMWGNA 397

Query: 547 DYGQLGSPGSTGKFPTRIE 565
              QLG PG     P  +E
Sbjct: 398 KDSQLGVPGLPEVQPCPVE 416



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 171/368 (46%), Gaps = 75/368 (20%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM----------------------- 352
           Q+ SWG GS G+LG G+E    YP  +     +N+H                        
Sbjct: 48  QLLSWGRGSSGQLGGGIEETRLYPSPV-----ANLHALPSSFSLSPTPGQLLIKNQNSTI 102

Query: 353 ---------VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
                    ++CG FH+ A+ + G+++ WG G  + G LG   E   ++P  ++  ++  
Sbjct: 103 TKQEAIEVGISCGLFHS-ALLVDGNIWIWGKG--DGGRLGFGHENPVFVP-TLNPNLD-- 156

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
               +  G  H+ A+TS G++FT+G G FGALGH       +PR V+ +   K    +  
Sbjct: 157 PAKCVALGGVHSVALTSLGQVFTWGYGGFGALGHCVYHRELLPRLVQGISNEKIRHIATS 216

Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQL------------GHGDAEP-RVVP 510
             HTAAI E            + +++TWG   EG              G G + P +V  
Sbjct: 217 GTHTAAITE------------TGEVYTWGR-DEGDGRLGLGPGRGPNEGGGLSIPSKVKA 263

Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH 570
           L V V+       V CG   T  LT  GQ+++ G+    +LG    TG +  +   N++ 
Sbjct: 264 LTVPVA------AVFCGGFFTAVLTEEGQIWNWGANSNYELGRGNKTGGWQPKPIPNLEG 317

Query: 571 RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
             +  IA G YH   ++ + +V +WG G +GQLGH   +N++ P +++AL D++V  + C
Sbjct: 318 VRVIQIASGGYHSLALTDEGKVLSWGFGGHGQLGHPSIQNQKIPMVIDALADQRVVYIAC 377

Query: 631 GSNFTAAI 638
           G + +AAI
Sbjct: 378 GGSTSAAI 385



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 162/355 (45%), Gaps = 37/355 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+CG  H+ L+   G I+ WG+G GG+LG G E  V  P L   L+ +    VA G  H+
Sbjct: 112 ISCGLFHSALLV-DGNIWIWGKGDGGRLGFGHENPVFVPTLNPNLDPAKC--VALGGVHS 168

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T  G ++TWG G    G LG        +PR V G +   +I  I     HTAAIT 
Sbjct: 169 VALTSLGQVFTWGYG--GFGALGHCVYHRELLPRLVQG-ISNEKIRHIATSGTHTAAITE 225

Query: 421 AGKLFTFG-------DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
            G+++T+G        G     G  +    S+P +V+ L  +      CG + TA + E 
Sbjct: 226 TGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPSKVKALT-VPVAAVFCGGFFTAVLTE- 283

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
                        +++ WG  +  +LG G+      P  +   + +   ++A G   ++A
Sbjct: 284 -----------EGQIWNWGANSNYELGRGNKTGGWQPKPIPNLEGVRVIQIASGGYHSLA 332

Query: 534 LTATGQVFSMGSADYGQLGSPG-STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
           LT  G+V S G   +GQLG P     K P  I+     R +  IACG    A ++ + ++
Sbjct: 333 LTDEGKVLSWGFGGHGQLGHPSIQNQKIPMVIDALADQRVVY-IACGGSTSAAITDEGKL 391

Query: 593 YTWGKGANGQLG-HGDNENKQTPTLV------EALRDKQVKSVVCGSNFTAAICL 640
           Y WG   + QLG  G  E +  P  V      + L   +V SV  G+  + A+CL
Sbjct: 392 YMWGNAKDSQLGVPGLPEVQPCPVEVVFLMEDDGLGPHKVLSVAVGA--SHAMCL 444


>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
           CCMP2712]
          Length = 413

 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 144/284 (50%), Gaps = 15/284 (5%)

Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAV 363
           G++H ++VT  GQ++S G  + G+LG G         L+++L    +   +C   H+  V
Sbjct: 144 GAEHVLVVTSAGQVYSCGCNNHGQLGLGSTKMSPSLLLVESLKHVRVLSASCSYHHSVVV 203

Query: 364 TLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGK 423
           +  G  +++G  +++ G LG  +  +  +P +V      L +    CG +HT  +T  G 
Sbjct: 204 SSDGSAFSFG--LNDCGQLGIGTRPNQLLPHRVELPSPHL-VRLAACGQYHTIFLTEEGM 260

Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
           +F+ G    G LG G RSST+VP  +  L+E    M +CG  HT  ++E           
Sbjct: 261 VFSCGKNLNGQLGLGSRSSTNVPTLIAALQERPASMIACGYSHTCVVLE----------- 309

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
              KLFT+G   +GQLG G  +    P+ V+   ++   K++CG   T  L+ +G+++S 
Sbjct: 310 -DGKLFTFGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLSESGELWSF 368

Query: 544 GSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
           G   +GQLG   ST +    +  ++  + + +IACG +H+  +S
Sbjct: 369 GCNCHGQLGLGDSTDRLVPVLVPSMTKKNLSEIACGFHHLVAIS 412



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 168/352 (47%), Gaps = 32/352 (9%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLG---HGVEADVS--YPKLIDALNG----SNIH 351
           +A GS+ +  +T++G+++  G  S G+L    H   A+ S  Y   I+ + G      + 
Sbjct: 78  VAAGSETSYFLTEEGKVYCCGLNSTGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVV 137

Query: 352 MVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ-MEGLQISSI 408
            V+C  G  H   VT +G +Y+ G   +N G LG  S  +   P  +  + ++ +++ S 
Sbjct: 138 QVSCFNGAEHVLVVTSAGQVYSCG--CNNHGQLGLGS--TKMSPSLLLVESLKHVRVLSA 193

Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTA 468
            C   H+  ++S G  F+FG    G LG G R +  +P  VE        +A+CG +HT 
Sbjct: 194 SCSYHHSVVVSSDGSAFSFGLNDCGQLGIGTRPNQLLPHRVELPSPHLVRLAACGQYHTI 253

Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH 528
            + E               +F+ G    GQLG G      VP  +    +     +ACG+
Sbjct: 254 FLTE------------EGMVFSCGKNLNGQLGLGSRSSTNVPTLIAALQERPASMIACGY 301

Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVV 586
           S T  +   G++F+ G    GQLG  G T     P ++E  +++  +  I+CG++   V+
Sbjct: 302 SHTCVVLEDGKLFTFGYNHQGQLG-LGHTDSVSSPMQVE-TLRNVKVVKISCGTHFTCVL 359

Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           S   E++++G   +GQLG GD+ ++  P LV ++  K +  + CG +   AI
Sbjct: 360 SESGELWSFGCNCHGQLGLGDSTDRLVPVLVPSMTKKNLSEIACGFHHLVAI 411



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 125/252 (49%), Gaps = 18/252 (7%)

Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
           LL + L+   VL A   +C   H+V+V+  G  FS+G    G+LG G   +   P  ++ 
Sbjct: 180 LLVESLKHVRVLSA---SCSYHHSVVVSSDGSAFSFGLNDCGQLGIGTRPNQLLPHRVEL 236

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
            +   + + ACG++HT  +T  G +++ G  ++  G LG  S  S  +P  ++   E   
Sbjct: 237 PSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLN--GQLGLGSRSSTNVPTLIAALQE-RP 293

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
            S I CG  HT  +   GKLFTFG    G LG G   S S P +VETL+ +K V  SCG 
Sbjct: 294 ASMIACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGT 353

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
             T  + E            S +L+++G    GQLG GD+  R+VP+ V      +  ++
Sbjct: 354 HFTCVLSE------------SGELWSFGCNCHGQLGLGDSTDRLVPVLVPSMTKKNLSEI 401

Query: 525 ACGHSITIALTA 536
           ACG    +A++ 
Sbjct: 402 ACGFHHLVAISG 413



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 154/336 (45%), Gaps = 32/336 (9%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           +F+ G+   G+LGH    +     L+ +L    I  VA G   +  +T  G +Y  G   
Sbjct: 42  VFACGQNRKGELGHSTFREQVEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYCCG--- 98

Query: 377 HNLGLLGQVSEISHWIPRKVSGQ-------MEGL----QISSICC--GPWHTAAITSAGK 423
             L   GQ++  +H      S +       MEGL    ++  + C  G  H   +TSAG+
Sbjct: 99  --LNSTGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQ 156

Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
           +++ G    G LG G    +     VE+LK ++ + ASC  +H + +V   G        
Sbjct: 157 VYSCGCNNHGQLGLGSTKMSPSLLLVESLKHVRVLSASCS-YHHSVVVSSDGSA------ 209

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
                F++G    GQLG G    +++P  V++         ACG   TI LT  G VFS 
Sbjct: 210 -----FSFGLNDCGQLGIGTRPNQLLPHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSC 264

Query: 544 GSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
           G    GQLG    S+   PT I   ++ R    IACG  H  VV    +++T+G    GQ
Sbjct: 265 GKNLNGQLGLGSRSSTNVPTLIAA-LQERPASMIACGYSHTCVVLEDGKLFTFGYNHQGQ 323

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           LG G  ++  +P  VE LR+ +V  + CG++FT  +
Sbjct: 324 LGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVL 359



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 95/196 (48%), Gaps = 3/196 (1%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           ++    R + LLP  +E       +  ACG  H + +T++G +FS G+   G+LG G  +
Sbjct: 219 QLGIGTRPNQLLPHRVELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQLGLGSRS 278

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
             + P LI AL      M+ACG  HTC V   G L+T+G        LG    +S   P 
Sbjct: 279 STNVPTLIAALQERPASMIACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHTDSVSS--PM 336

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           +V   +  +++  I CG   T  ++ +G+L++FG    G LG GD +   VP  V ++ +
Sbjct: 337 QVE-TLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQLGLGDSTDRLVPVLVPSMTK 395

Query: 455 LKTVMASCGVWHTAAI 470
                 +CG  H  AI
Sbjct: 396 KNLSEIACGFHHLVAI 411


>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
           mulatta]
          Length = 1020

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 165/347 (47%), Gaps = 35/347 (10%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDA 344
           LP+ +++   L+   ++CG +H++ V  +G++F+WG GS G+LG G   ++S+ PK I  
Sbjct: 65  LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGL 403
           LNG  I  V+CG +H+ A++    +++WG   H  G LG   E+ S   P++V   +EG+
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEVPSQASPQRVRS-LEGI 181

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS---STSVPREVETLKELKTVMA 460
            ++ +  G  H+ A++  G  F +G  + G L    R+    ++ P  +  LK L  +  
Sbjct: 182 PLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYI 241

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
           SCG  HTA +++              K+FT+GD + GQLG+     +  P  V+  D + 
Sbjct: 242 SCGDEHTAVLIQ------------DGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGL- 288

Query: 521 FCKVACGHSITIALT-ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
             ++ CG   T+A    TGQV S G        S  S    P  + GN       DI C 
Sbjct: 289 VSQIDCGSYHTLAYVHTTGQVISFGHGP-----SDKSKPTHPEALTGNF------DIRCL 337

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP--TLVEALRDKQ 624
                +V  + +    G  AN    H D  +   P  TL E  R  Q
Sbjct: 338 ISAEDLVDVQVKHIFAGTYANFVTTHQDTSSTSAPGKTLPEISRISQ 384



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 168/351 (47%), Gaps = 36/351 (10%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G +H++L+    ++ S G+ S G+LG         P+ I AL   N+ +V+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSL 88

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV   G ++ WG G      +G+  EIS + P+K++  + G++I  + CG +H+ A++  
Sbjct: 89  AVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIT-TLNGIKIIQVSCGHYHSLALSKD 146

Query: 422 GKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            ++F++G  + G LG G +  S + P+ V +L+ +     + G  H+ A+  + G +   
Sbjct: 147 SQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-SLCGTS--- 202

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVV---PLCVKVSDDISFCKVACGHSITIALTAT 537
                   F WG  + GQL        V    PL +    ++    ++CG   T  L   
Sbjct: 203 --------FGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQD 254

Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPT---RIEGNIKHRYIEDIACGSYH-IAVVSSKSEV 592
           G+VF+ G    GQLG SP    + P    RI+G      +  I CGSYH +A V +  +V
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQV 309

Query: 593 YTWGKGANGQLGHGDNE----NKQTPTLV--EALRDKQVKSVVCGS--NFT 635
            ++G G + +      E    N     L+  E L D QVK +  G+  NF 
Sbjct: 310 ISFGHGPSDKSKPTHPEALTGNFDIRCLISAEDLVDVQVKHIFAGTYANFV 360



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 115/255 (45%), Gaps = 23/255 (9%)

Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
           + R+ + +  G ++     G  H+  + +  ++ + GD + G LG        +P  ++ 
Sbjct: 12  LQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQA 71

Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVP 510
           L+ L   + SCG  H+ A+                ++F WG G+EGQLG G+  E    P
Sbjct: 72  LETLNVDLVSCGKEHSLAVCHKG------------RVFAWGAGSEGQLGIGEFKEISFTP 119

Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG----SPGSTGKFPTRIEG 566
             +   + I   +V+CGH  ++AL+   QVFS G   +GQLG     P      P R+  
Sbjct: 120 KKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQAS--PQRVR- 176

Query: 567 NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG-HGDNENKQT--PTLVEALRDK 623
           +++   +  +A G  H   +S     + WG  + GQL   G N   Q+  P  + AL++ 
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNL 236

Query: 624 QVKSVVCGSNFTAAI 638
            V  + CG   TA +
Sbjct: 237 GVIYISCGDEHTAVL 251


>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
          Length = 1020

 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 165/347 (47%), Gaps = 35/347 (10%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDA 344
           LP+ +++   L+   ++CG +H++ V  +G++F+WG GS G+LG G   ++S+ PK I  
Sbjct: 65  LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGL 403
           LNG  I  V+CG +H+ A++    +++WG   H  G LG   E+ S   P++V   +EG+
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEVPSQASPQRVRS-LEGI 181

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS---STSVPREVETLKELKTVMA 460
            ++ +  G  H+ A++  G  F +G  + G L    R+    ++ P  +  LK L  +  
Sbjct: 182 PLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYI 241

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
           SCG  HTA +++              K+FT+GD + GQLG+     +  P  V+  D + 
Sbjct: 242 SCGDEHTAVLIQ------------DGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGL- 288

Query: 521 FCKVACGHSITIALT-ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
             ++ CG   T+A    TGQV S G        S  S    P  + GN       DI C 
Sbjct: 289 VSQIDCGSYHTLAYVHTTGQVISFGHGP-----SDKSKPTHPEALTGNF------DIRCL 337

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP--TLVEALRDKQ 624
                +V  + +    G  AN    H D  +   P  TL E  R  Q
Sbjct: 338 ISAEDLVDVQVKHIFAGTYANFVTTHQDTSSTSAPGKTLPEISRISQ 384



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 168/351 (47%), Gaps = 36/351 (10%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G +H++L+    ++ S G+ S G+LG         P+ I AL   N+ +V+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSL 88

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV   G ++ WG G      +G+  EIS + P+K++  + G++I  + CG +H+ A++  
Sbjct: 89  AVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIT-TLNGIKIIQVSCGHYHSLALSKD 146

Query: 422 GKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            ++F++G  + G LG G +  S + P+ V +L+ +     + G  H+ A+  + G +   
Sbjct: 147 SQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-SLCGTS--- 202

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVV---PLCVKVSDDISFCKVACGHSITIALTAT 537
                   F WG  + GQL        V    PL +    ++    ++CG   T  L   
Sbjct: 203 --------FGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQD 254

Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPT---RIEGNIKHRYIEDIACGSYH-IAVVSSKSEV 592
           G+VF+ G    GQLG SP    + P    RI+G      +  I CGSYH +A V +  +V
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQV 309

Query: 593 YTWGKGANGQLGHGDNE----NKQTPTLV--EALRDKQVKSVVCGS--NFT 635
            ++G G + +      E    N     L+  E L D QVK +  G+  NF 
Sbjct: 310 ISFGHGPSDKSKPTHPEALTGNFDIRCLISAEDLVDVQVKHIFAGTYANFV 360



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 115/255 (45%), Gaps = 23/255 (9%)

Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
           + R+ + +  G ++     G  H+  + +  ++ + GD + G LG        +P  ++ 
Sbjct: 12  LQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQA 71

Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVP 510
           L+ L   + SCG  H+ A+                ++F WG G+EGQLG G+  E    P
Sbjct: 72  LETLNVDLVSCGKEHSLAVCHKG------------RVFAWGAGSEGQLGIGEFKEISFTP 119

Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG----SPGSTGKFPTRIEG 566
             +   + I   +V+CGH  ++AL+   QVFS G   +GQLG     P      P R+  
Sbjct: 120 KKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQAS--PQRVR- 176

Query: 567 NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG-HGDNENKQT--PTLVEALRDK 623
           +++   +  +A G  H   +S     + WG  + GQL   G N   Q+  P  + AL++ 
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNL 236

Query: 624 QVKSVVCGSNFTAAI 638
            V  + CG   TA +
Sbjct: 237 GVIYISCGDEHTAVL 251


>gi|5823976|emb|CAB54002.1| RPGR protein [Homo sapiens]
 gi|119579848|gb|EAW59444.1| retinitis pigmentosa GTPase regulator, isoform CRA_d [Homo sapiens]
          Length = 646

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 175/358 (48%), Gaps = 38/358 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H+ +VT   +++ +G  + G+LG G ++ +S P  + AL    + + ACG  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 361 CAVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
              T  G++Y T G+    LG LG   E + +    +S      +I  +  G   +AA+T
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG-LGDTEERNTF--HVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G+LF +GD + G +G  + S+  VP++V   K +  +  SCG +H+A +         
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVT-------- 206

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
               +  +L+ +G+   G+LG  +      R   L  ++ + +   +VACG   T+ LT 
Sbjct: 207 ----TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV--IQVACGGEHTVVLTE 260

Query: 537 TGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
              V++ G   +GQLG     G F      P  IE NI+ + I  I+CG  H A+++   
Sbjct: 261 NA-VYTFGLGQFGQLG----LGTFLFETSEPKVIE-NIRDQTISYISCGENHTALITDIG 314

Query: 591 EVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCGS-NFTAAICLHKGVS 645
            +YT+G G +G+LG G  +  N   PTL        VK V CG  +       H+GV+
Sbjct: 315 LMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAPHRGVA 372



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDA 344
           PKV+E+        I+CG  H  L+T  G ++++G+G  GKLG G+E   ++  P L   
Sbjct: 286 PKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSN 345

Query: 345 LNGSNIHMVACGEFH 359
                + +VACG  H
Sbjct: 346 FLRFIVKLVACGGCH 360


>gi|159038540|ref|YP_001537793.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157917375|gb|ABV98802.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 579

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 154/357 (43%), Gaps = 19/357 (5%)

Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
           L+  VL  T V  A+ +A G   A      G   +WG  S G+LG G   D S P  ++ 
Sbjct: 31  LVAIVLGVTSVGAARVLAQGVPSAA-AGPPGTGLAWGTNSAGRLGDGTTTDSSSPVSVNV 89

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGL 403
             G+ I  VA G  H+ AVT +G    WGD  +  G LG  + I S   P  V     G 
Sbjct: 90  PAGTTITAVAGGAGHSLAVTSAGTALAWGD--NAFGQLGDGTTIPSSSTPVAVD-VPAGT 146

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
            ++++  G  H  A+TSAG    +GD  +G LG G  + +  P  V           + G
Sbjct: 147 TVTALSGGGVHNLAVTSAGTALAWGDNFWGQLGDGSTTRSRTPVAVNVPAGTTITAVAAG 206

Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
             H+ A+             S+     WGD + GQLG G A    +P+   V    +   
Sbjct: 207 QGHSLAVT------------SAGTALAWGDNSSGQLGDGTATDSSIPVAADVPAGTTITA 254

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH-RYIEDIACGSYH 582
           VA G   ++ALT+ G V + G+   GQLG  G+T    T +  ++     +  +A G  H
Sbjct: 255 VAAGGLHSLALTSGGDVLAWGANGSGQLGD-GTTTSSSTPVAVDVPAGTTVTAVAAGGRH 313

Query: 583 IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
              V+S  +V  WG    GQLG G   +  TP  V       + +V  GS  + A+ 
Sbjct: 314 SLAVTSAGDVLAWGDNTAGQLGDGSTTHSSTPVAVNVPAGTTITAVATGSGHSLAVT 370



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 150/342 (43%), Gaps = 18/342 (5%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEF 358
           ++A G+ H++ VT  G   +WG+ + G+LG G      S P  +D   G+ +  ++ G  
Sbjct: 97  AVAGGAGHSLAVTSAGTALAWGDNAFGQLGDGTTIPSSSTPVAVDVPAGTTVTALSGGGV 156

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
           H  AVT +G    WGD     G LG  S      P  V+    G  I+++  G  H+ A+
Sbjct: 157 HNLAVTSAGTALAWGDNF--WGQLGDGSTTRSRTPVAVN-VPAGTTITAVAAGQGHSLAV 213

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           TSAG    +GD + G LG G  + +S+P   +          + G  H+ A+      TS
Sbjct: 214 TSAGTALAWGDNSSGQLGDGTATDSSIPVAADVPAGTTITAVAAGGLHSLAL------TS 267

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
           G +      +  WG    GQLG G       P+ V V    +   VA G   ++A+T+ G
Sbjct: 268 GGD------VLAWGANGSGQLGDGTTTSSSTPVAVDVPAGTTVTAVAAGGRHSLAVTSAG 321

Query: 539 QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH-RYIEDIACGSYHIAVVSSKSEVYTWGK 597
            V + G    GQLG  GST    T +  N+     I  +A GS H   V+S      WG 
Sbjct: 322 DVLAWGDNTAGQLGD-GSTTHSSTPVAVNVPAGTTITAVATGSGHSLAVTSTDTALAWGD 380

Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
              GQLG G   +   P  V+      V ++  GS  + AI 
Sbjct: 381 NTFGQLGDGSTTSSIIPVAVDLPAGTTVTAIAGGSFHSLAIV 422



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 162/378 (42%), Gaps = 28/378 (7%)

Query: 217 DDANSRSSTADSFRISLSSAVSSSSQGSCHE-DFDGLGDVFIWGEGLGNGLLGGAVNGVE 275
           D   + SS+  S  +   + +++ + G+ H       G    WG+    G LG   +G  
Sbjct: 75  DGTTTDSSSPVSVNVPAGTTITAVAGGAGHSLAVTSAGTALAWGDN-AFGQLG---DGTT 130

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           I S+    A+   V   T V    +++ G  H + VT  G   +WG+   G+LG G    
Sbjct: 131 IPSSSTPVAV--DVPAGTTV---TALSGGGVHNLAVTSAGTALAWGDNFWGQLGDGSTTR 185

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRK 395
              P  ++   G+ I  VA G+ H+ AVT +G    WGD  ++ G LG  +     IP  
Sbjct: 186 SRTPVAVNVPAGTTITAVAAGQGHSLAVTSAGTALAWGD--NSSGQLGDGTATDSSIPVA 243

Query: 396 VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
                 G  I+++  G  H+ A+TS G +  +G    G LG G  +S+S P  V+     
Sbjct: 244 AD-VPAGTTITAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGTTTSSSTPVAVDVPAGT 302

Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
                + G  H+ A+             S+  +  WGD   GQLG G       P+ V V
Sbjct: 303 TVTAVAAGGRHSLAVT------------SAGDVLAWGDNTAGQLGDGSTTHSSTPVAVNV 350

Query: 516 SDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIE 574
               +   VA G   ++A+T+T    + G   +GQLG   +T    P  ++       + 
Sbjct: 351 PAGTTITAVATGSGHSLAVTSTDTALAWGDNTFGQLGDGSTTSSIIPVAVD-LPAGTTVT 409

Query: 575 DIACGSYH-IAVVSSKSE 591
            IA GS+H +A+V S S 
Sbjct: 410 AIAGGSFHSLAIVPSTST 427


>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
           [Ornithorhynchus anatinus]
          Length = 1006

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 148/321 (46%), Gaps = 24/321 (7%)

Query: 344 ALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
           AL+  NI  V+CG+ HT A+   G +Y WG D    LGL G    I   +PR +   +  
Sbjct: 29  ALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIR--VPRNIKS-LSD 85

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMAS 461
           +QI  + CG +H+ A++   ++F++G   +G LG G +    + P+ +++L  +  +  +
Sbjct: 86  IQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIA 145

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
            G  H+  +              S  +F WG    GQLG  D   R VP  +K       
Sbjct: 146 AGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKI 193

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
             + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +  +ACG  
Sbjct: 194 VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQ 253

Query: 582 HI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA---LRDKQVKSVVCGSNFTAA 637
           H  A V S   +Y++G G NGQLG G   N+++P  V+       +Q  S + G  +   
Sbjct: 254 HTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYSEQDPSNIDGEQYY-- 311

Query: 638 ICLHKGVSIADHSICSGCRNQ 658
            C+ +  S  D S    C  Q
Sbjct: 312 -CVKRIFSGGDQSFSHYCSPQ 331



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 142/284 (50%), Gaps = 22/284 (7%)

Query: 291 ESTVVLDAQSI---ACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVEADVSYPKLIDALN 346
           E  V LDAQ+I   +CG  H + +  +GQ+++WG  + G+LG  G E  +  P+ I +L+
Sbjct: 25  EQVVALDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLS 84

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
              I  V+CG +H+ A++   ++++WG   +  G LG   E       ++   + G+   
Sbjct: 85  DIQIVQVSCGYYHSLALSKGSEVFSWGQ--NKYGQLGLGFEFKKQTSPQLIKSLLGIPFM 142

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            I  G  H+  +T +G +F +G   FG LG  D +   VP  +++L+  K V   CG  H
Sbjct: 143 QIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 202

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           TAA+ +  G            +FT+G G  GQLGH      + P  V         +VAC
Sbjct: 203 TAALTKEGG------------VFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVAC 250

Query: 527 GHSITIALT-ATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGN 567
           G   T A   ++G+++S G    GQLG+ GST   K P  ++GN
Sbjct: 251 GRQHTSAFVPSSGRIYSFGLGGNGQLGT-GSTSNRKSPFTVKGN 293



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 118/230 (51%), Gaps = 15/230 (6%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDA 344
           +P+ ++S   +    ++CG  H++ ++K  ++FSWG+   G+LG G E    + P+LI +
Sbjct: 76  VPRNIKSLSDIQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKS 135

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           L G     +A G  H+  +TLSG ++ WG   +  G LG   E   ++P  +   +   +
Sbjct: 136 LLGIPFMQIAAGGAHSFVLTLSGAIFGWGR--NKFGQLGLNDENDRYVPNLLKS-LRSQK 192

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           I  ICCG  HTAA+T  G +FTFG G +G LGH   S    PR+V  L        +CG 
Sbjct: 193 IVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGR 252

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
            HT+A V            SS +++++G G  GQLG G    R  P  VK
Sbjct: 253 QHTSAFVP-----------SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 291



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 98/200 (49%), Gaps = 16/200 (8%)

Query: 448 EVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG-HGDAEP 506
           +V  L     V  SCG  HT A+ +              +++ WG   +GQLG  G  E 
Sbjct: 26  QVVALDAQNIVAVSCGDAHTLALND------------KGQVYAWGLDTDGQLGLPGTEEC 73

Query: 507 RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK--FPTRI 564
             VP  +K   DI   +V+CG+  ++AL+   +VFS G   YGQLG      K   P  I
Sbjct: 74  IRVPRNIKSLSDIQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLI 133

Query: 565 EGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ 624
           +  +   +++ IA G  H  V++    ++ WG+   GQLG  D  ++  P L+++LR ++
Sbjct: 134 KSLLGIPFMQ-IAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK 192

Query: 625 VKSVVCGSNFTAAICLHKGV 644
           +  + CG + TAA+    GV
Sbjct: 193 IVYICCGEDHTAALTKEGGV 212


>gi|405964700|gb|EKC30153.1| Serine/threonine-protein kinase Nek8 [Crassostrea gigas]
          Length = 774

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 157/341 (46%), Gaps = 48/341 (14%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYP-KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           +F WG G            VS P KL    + + +  V+ G     AVT +G L+ W   
Sbjct: 314 VFFWGIG------------VSSPVKLPLPSSDTQVTQVSTGRTQKAAVTKNGRLFVWESS 361

Query: 376 IHNLG---LLGQVSEISH---WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
             N+G   L+   +E SH   ++PR + GQ  G+ I  + CG   TA +T  G L TFG 
Sbjct: 362 --NVGTDTLIPGATE-SHTLTYVPRYLEGQ-SGVNIQQVACGDLFTACLTDRGILMTFGS 417

Query: 430 GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
           G +G LGHG+ +  +  + VE L   + V  SCG  H  A+             +  ++F
Sbjct: 418 GVYGCLGHGNYNDVAQAKIVEDLLGYEVVQVSCGASHVLAVT------------NEHEVF 465

Query: 490 TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
           +WG G  G+LG GD E    P  V + + +    V CG   ++ LT   ++   GS  Y 
Sbjct: 466 SWGRGDNGRLGLGDQESHSSPRPVVIPEPLRPSSVHCGVDCSMILTLDNKLLCCGSNRYN 525

Query: 550 QLG-----SPGSTGKFPTRIEGNIK-------HRYIEDIACGSYHIAVVSSKSEVYTWGK 597
           +L      + G+  K    I   ++       +  ++ +A G+ H A V+ + + YT+G 
Sbjct: 526 KLALDVIATDGTCMKLVDEIHTFVQTASHPIGNLLVKGVAMGTSHTAAVTVEGQCYTFGT 585

Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
              GQLG+  N ++Q P  V+  + ++V  V CG  FT  +
Sbjct: 586 NQFGQLGNQTNNSRQ-PQEVKIAQTQKVAMVACGDTFTVIV 625



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 178/402 (44%), Gaps = 64/402 (15%)

Query: 230 RISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKV 289
           R  LS+  S + + +       L  VF WG G+ + +       + + S+D +       
Sbjct: 289 RSRLSTRGSMTPRDALSAKPPALSSVFFWGIGVSSPV------KLPLPSSDTQ------- 335

Query: 290 LESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK----LGHGVEADVSY-PKLIDA 344
                      ++ G      VTK G++F W   + G      G      ++Y P+ ++ 
Sbjct: 336 --------VTQVSTGRTQKAAVTKNGRLFVWESSNVGTDTLIPGATESHTLTYVPRYLEG 387

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
            +G NI  VACG+  T  +T  G L T+G G++     G  ++++     K+   + G +
Sbjct: 388 QSGVNIQQVACGDLFTACLTDRGILMTFGSGVYGCLGHGNYNDVAQ---AKIVEDLLGYE 444

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +  + CG  H  A+T+  ++F++G G  G LG GD+ S S PR V   + L+     CGV
Sbjct: 445 VVQVSCGASHVLAVTNEHEVFSWGRGDNGRLGLGDQESHSSPRPVVIPEPLRPSSVHCGV 504

Query: 465 WHTAAIVEVAGKT--SGSNGLSSKKL-FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI-S 520
              + I+ +  K    GSN  +   L     DG                 C+K+ D+I +
Sbjct: 505 -DCSMILTLDNKLLCCGSNRYNKLALDVIATDGT----------------CMKLVDEIHT 547

Query: 521 FCK-------------VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN 567
           F +             VA G S T A+T  GQ ++ G+  +GQLG+  +  + P  ++  
Sbjct: 548 FVQTASHPIGNLLVKGVAMGTSHTAAVTVEGQCYTFGTNQFGQLGNQTNNSRQPQEVK-I 606

Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
            + + +  +ACG     +V+ + EVY++G  + G+LG  + +
Sbjct: 607 AQTQKVAMVACGDTFTVIVADEGEVYSFGNQSRGRLGRPEED 648



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 147/327 (44%), Gaps = 41/327 (12%)

Query: 253 GDVFIW-GEGLG-NGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
           G +F+W    +G + L+ GA     ++        +P+ LE    ++ Q +ACG      
Sbjct: 353 GRLFVWESSNVGTDTLIPGATESHTLT-------YVPRYLEGQSGVNIQQVACGDLFTAC 405

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           +T +G + ++G G  G LGHG   DV+  K+++ L G  +  V+CG  H  AVT   +++
Sbjct: 406 LTDRGILMTFGSGVYGCLGHGNYNDVAQAKIVEDLLGYEVVQVSCGASHVLAVTNEHEVF 465

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WG G  + G LG   + SH  PR V    E L+ SS+ CG   +  +T   KL   G  
Sbjct: 466 SWGRG--DNGRLGLGDQESHSSPRPVVIP-EPLRPSSVHCGVDCSMILTLDNKLLCCGSN 522

Query: 431 TFGALG----HGDRSSTSVPREVETLKE--------LKTVMASCGVWHTAAIVEVAGKTS 478
            +  L       D +   +  E+ T  +        L     + G  HTAA V V G+  
Sbjct: 523 RYNKLALDVIATDGTCMKLVDEIHTFVQTASHPIGNLLVKGVAMGTSHTAA-VTVEGQC- 580

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
                     +T+G    GQLG+     R  P  VK++       VACG + T+ +   G
Sbjct: 581 ----------YTFGTNQFGQLGNQTNNSR-QPQEVKIAQTQKVAMVACGDTFTVIVADEG 629

Query: 539 QVFSMGSADYGQLG----SPGSTGKFP 561
           +V+S G+   G+LG     P   GK P
Sbjct: 630 EVYSFGNQSRGRLGRPEEDPTEPGKVP 656



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 5/171 (2%)

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQ--LGHGDAEPRV---VPLCVKVSDDISFCKVACGHS 529
           G+T  +    + +LF W     G   L  G  E      VP  ++    ++  +VACG  
Sbjct: 342 GRTQKAAVTKNGRLFVWESSNVGTDTLIPGATESHTLTYVPRYLEGQSGVNIQQVACGDL 401

Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
            T  LT  G + + GS  YG LG          +I  ++    +  ++CG+ H+  V+++
Sbjct: 402 FTACLTDRGILMTFGSGVYGCLGHGNYNDVAQAKIVEDLLGYEVVQVSCGASHVLAVTNE 461

Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            EV++WG+G NG+LG GD E+  +P  V      +  SV CG + +  + L
Sbjct: 462 HEVFSWGRGDNGRLGLGDQESHSSPRPVVIPEPLRPSSVHCGVDCSMILTL 512


>gi|78190492|ref|NP_001030025.1| X-linked retinitis pigmentosa GTPase regulator isoform C [Homo
           sapiens]
          Length = 1152

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 175/358 (48%), Gaps = 38/358 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H+ +VT   +++ +G  + G+LG G ++ +S P  + AL    + + ACG  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 361 CAVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
              T  G++Y T G+    LG LG   E + +    +S      +I  +  G   +AA+T
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG-LGDTEERNTF--HVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G+LF +GD + G +G  + S+  VP++V   K +  +  SCG +H+A +         
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVT-------- 206

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
               +  +L+ +G+   G+LG  +      R   L  ++ + +   +VACG   T+ LT 
Sbjct: 207 ----TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV--IQVACGGEHTVVLTE 260

Query: 537 TGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
              V++ G   +GQLG     G F      P  IE NI+ + I  I+CG  H A+++   
Sbjct: 261 NA-VYTFGLGQFGQLG----LGTFLFETSEPKVIE-NIRDQTISYISCGENHTALITDIG 314

Query: 591 EVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCGS-NFTAAICLHKGVS 645
            +YT+G G +G+LG G  +  N   PTL        VK V CG  +       H+GV+
Sbjct: 315 LMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAPHRGVA 372



 Score = 47.0 bits (110), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDA 344
           PKV+E+        I+CG  H  L+T  G ++++G+G  GKLG G+E   ++  P L   
Sbjct: 286 PKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSN 345

Query: 345 LNGSNIHMVACGEFH 359
                + +VACG  H
Sbjct: 346 FLRFIVKLVACGGCH 360


>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
          Length = 1020

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 166/349 (47%), Gaps = 39/349 (11%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDA 344
           LP+ +++   L+   ++CG +H++ V  +G++F+WG GS G+LG G   ++S+ PK I  
Sbjct: 65  LPEPIQALETLNVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGL 403
           LNG  I  V+CG +H+ A++    +++WG   H  G LG   E+ S   P++V   +EG+
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEVPSQASPQRVRS-LEGI 181

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS---STSVPREVETLKELKTVMA 460
            ++ +  G  H+ A++  G  F +G  + G L    R+    ++ P  +  LK L  +  
Sbjct: 182 PLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYI 241

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
           SCG  HTA +++              K+FT+GD + GQLG+     +  P  V+  D + 
Sbjct: 242 SCGDEHTAVLIQ------------DGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGL- 288

Query: 521 FCKVACGHSITIALT-ATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIA 577
             ++ CG   T+A    TGQV S G         P  T K   P  + GN       DI 
Sbjct: 289 VSQIDCGSYHTLAYVHTTGQVISFGHG-------PSDTSKPTHPEALTGNF------DIR 335

Query: 578 CGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP--TLVEALRDKQ 624
           C      +V  + +    G  AN    H D  +   P  TL E  R  Q
Sbjct: 336 CLISAEDLVDVQVKHIFAGTYANFVTTHQDTSSTGAPGKTLPEISRISQ 384



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 169/351 (48%), Gaps = 36/351 (10%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G +H++L+    ++ S G+ S G+LG         P+ I AL   N+ +V+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQALETLNVDLVSCGKEHSL 88

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV   G ++ WG G      +G+  EIS + P+K++  + G++I  + CG +H+ A++  
Sbjct: 89  AVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIT-TLNGIKIIQVSCGHYHSLALSKD 146

Query: 422 GKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            ++F++G  + G LG G +  S + P+ V +L+ +     + G  H+ A+  + G +   
Sbjct: 147 SQVFSWGKNSHGQLGLGKEVPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-SLCGTS--- 202

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVV---PLCVKVSDDISFCKVACGHSITIALTAT 537
                   F WG  + GQL        V    PL +    ++    ++CG   T  L   
Sbjct: 203 --------FGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNLGVIYISCGDEHTAVLIQD 254

Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPT---RIEGNIKHRYIEDIACGSYH-IAVVSSKSEV 592
           G+VF+ G    GQLG SP    + P    RI+G      +  I CGSYH +A V +  +V
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQV 309

Query: 593 YTWGKGAN--GQLGHGD----NENKQTPTLVEALRDKQVKSVVCGS--NFT 635
            ++G G +   +  H +    N + +     E L D QVK +  G+  NF 
Sbjct: 310 ISFGHGPSDTSKPTHPEALTGNFDIRCLISAEDLVDVQVKHIFAGTYANFV 360



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 115/255 (45%), Gaps = 23/255 (9%)

Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
           + R+ + +  G ++     G  H+  + +  ++ + GD + G LG        +P  ++ 
Sbjct: 12  LQRRRTERSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRRAPRGELPEPIQA 71

Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVP 510
           L+ L   + SCG  H+ A+                ++F WG G+EGQLG G+  E    P
Sbjct: 72  LETLNVDLVSCGKEHSLAVCH------------KGRVFAWGAGSEGQLGIGEFKEISFTP 119

Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG----SPGSTGKFPTRIEG 566
             +   + I   +V+CGH  ++AL+   QVFS G   +GQLG     P      P R+  
Sbjct: 120 KKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEVPSQAS--PQRVR- 176

Query: 567 NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG-HGDNENKQT--PTLVEALRDK 623
           +++   +  +A G  H   +S     + WG  + GQL   G N   Q+  P  + AL++ 
Sbjct: 177 SLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIGALKNL 236

Query: 624 QVKSVVCGSNFTAAI 638
            V  + CG   TA +
Sbjct: 237 GVIYISCGDEHTAVL 251


>gi|77403863|tpg|DAA05713.1| TPA_exp: RPGR ORF15 isoform [Homo sapiens]
          Length = 1152

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 175/358 (48%), Gaps = 38/358 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H+ +VT   +++ +G  + G+LG G ++ +S P  + AL    + + ACG  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 361 CAVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
              T  G++Y T G+    LG LG   E + +    +S      +I  +  G   +AA+T
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG-LGDTEERNTF--HVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G+LF +GD + G +G  + S+  VP++V   K +  +  SCG +H+A +         
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVT-------- 206

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
               +  +L+ +G+   G+LG  +      R   L  ++ + +   +VACG   T+ LT 
Sbjct: 207 ----TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV--IQVACGGEHTVVLTE 260

Query: 537 TGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
              V++ G   +GQLG     G F      P  IE NI+ + I  I+CG  H A+++   
Sbjct: 261 NA-VYTFGLGQFGQLG----LGTFLFETSEPKVIE-NIRDQTISYISCGENHTALITDIG 314

Query: 591 EVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCGS-NFTAAICLHKGVS 645
            +YT+G G +G+LG G  +  N   PTL        VK V CG  +       H+GV+
Sbjct: 315 LMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAPHRGVA 372



 Score = 47.0 bits (110), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDA 344
           PKV+E+        I+CG  H  L+T  G ++++G+G  GKLG G+E   ++  P L   
Sbjct: 286 PKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSN 345

Query: 345 LNGSNIHMVACGEFH 359
                + +VACG  H
Sbjct: 346 FLRFIVKLVACGGCH 360


>gi|344292741|ref|XP_003418084.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Loxodonta africana]
          Length = 1100

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 168/349 (48%), Gaps = 49/349 (14%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H  L+T   +++ +G  + G+LG G ++ V  P  + AL    + + ACG  HT
Sbjct: 36  LSCGDEHTALITGNNKLYMFGSNNWGQLGLGSKSAVYRPICVKALKSEKVKLAACGRNHT 95

Query: 361 CAVTLSGDLY-TWGDGIHNLGLLGQVSE------ISHWIPRKVSGQMEGLQISSICCGPW 413
              T  G++Y T G+    LG LG   E      IS +  R         +I  +  G  
Sbjct: 96  LVSTEGGNVYATGGNNEGQLG-LGDTEERNSFHLISFFTSRH--------KIKQLSAGAN 146

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
            +AA+T  G+LF +GD + G +G    S+  VPR+V   K +  +  SCG +H+ A V +
Sbjct: 147 ISAALTEDGELFMWGDNSEGQIGLNSISNVYVPRQVTVGKPISWI--SCGYYHS-AFVTM 203

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE---PRVVPLCVKVSDDISFCKVACGHSI 530
            G           KL+T+G+   G+LG    +    R   L   +S+ +   +VACG   
Sbjct: 204 EG-----------KLYTFGEPECGKLGLPSEQLINHRKPQLVSGISEKV--IQVACGGGH 250

Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIA 584
           T+ LT    V++ G   +GQLG     G F      P  +E ++K + I  I+CG  H A
Sbjct: 251 TVVLTEKA-VYTFGQGRFGQLG----LGSFIFQAPEPAILE-HVKDQKIRHISCGENHTA 304

Query: 585 VVSSKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
           +++    +YT+G G +G+LG G  +  N+  PTL        +  V CG
Sbjct: 305 LITDVGHMYTFGDGRHGKLGLGLENFTNQFVPTLCSHFSKFIIHLVACG 353



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 2/81 (2%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE--ADVSYPKLIDA 344
           P +LE       + I+CG  H  L+T  G ++++G+G  GKLG G+E   +   P L   
Sbjct: 282 PAILEHVKDQKIRHISCGENHTALITDVGHMYTFGDGRHGKLGLGLENFTNQFVPTLCSH 341

Query: 345 LNGSNIHMVACGEFHTCAVTL 365
            +   IH+VACG  H     +
Sbjct: 342 FSKFIIHLVACGGCHMLIFAI 362



 Score = 46.2 bits (108), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 34/60 (56%)

Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           ++CG  H A+++  +++Y +G    GQLG G       P  V+AL+ ++VK   CG N T
Sbjct: 36  LSCGDEHTALITGNNKLYMFGSNNWGQLGLGSKSAVYRPICVKALKSEKVKLAACGRNHT 95


>gi|307107146|gb|EFN55390.1| hypothetical protein CHLNCDRAFT_57991 [Chlorella variabilis]
          Length = 596

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 175/376 (46%), Gaps = 65/376 (17%)

Query: 279 ADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG--VEADV 336
           A  RD  +P    +   +    ++ GS H+  ++++G++++WG  S G+LGHG     +V
Sbjct: 204 AVERDVKVPLYQGAPDDIHLAVVSAGSSHSASISRRGELYTWGLASSGELGHGGWTPIEV 263

Query: 337 SYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG---------IHNLGLLGQVSE 387
           S P++I +L  + I  V+CG  HT A++ +G L++ G G          H+ GLL  V  
Sbjct: 264 SCPRMITSLQRTRIVSVSCGANHTLAISETGQLWSCGRGRHGQLGHGHFHDEGLLMLVDT 323

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS------ 441
           I H             ++ S+  G  H+ A+ + GK+FT+GD + G LGH   +      
Sbjct: 324 IRHE------------RVVSVAAGRAHSVALAADGKIFTWGDASKGQLGHAQLAAVMQGP 371

Query: 442 -----STSVPREVETLKELK-------TVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
                S   P+ +++L+  +       T +A+ G  H+ A V VAG            L 
Sbjct: 372 NPQPLSIPFPQAIQSLEPARLKPPARVTAIAAGGD-HSMA-VTVAGA-----------LL 418

Query: 490 TWGDGAEGQ--LGHGDAEPRVVPLCVKVSDD------ISFCKVACGHSITIALTAT---G 538
            +G    GQ  LG GD   R++P  V ++ +      +   +V CG   T+AL       
Sbjct: 419 AFGSNKHGQARLGTGDTLDRMIPTEVPLALESEGGQLVRAMQVHCGAQHTLALVQVQGHH 478

Query: 539 QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           QV S+G   YG+LG      +        +K + I  ++ G +H A +     +Y WG+G
Sbjct: 479 QVRSVGGNSYGELGLGDRLERHRFHPIPALKGKSIVCVSVGDWHNAAICQDGRLYVWGRG 538

Query: 599 ANGQLGHGDNENKQTP 614
             GQLG GD+ N+  P
Sbjct: 539 DCGQLGLGDDRNRWAP 554



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 181/422 (42%), Gaps = 78/422 (18%)

Query: 275 EISSADRRDALLPKVL-ESTVVLDAQSIACGSKHAVLVTKQGQ-------IFSWGEGSGG 326
           EIS  +    LL  V  +S       +IA G+ H V +  Q +       +++ G G  G
Sbjct: 127 EISKGESYVTLLNFVTGQSNAAAQGTAIALGTYHTVGLLCQPEQAAPEYAMYAMGRGFHG 186

Query: 327 KLG-------------HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           +LG               VE DV  P    A +  ++ +V+ G  H+ +++  G+LYTWG
Sbjct: 187 QLGLEQFDNQEQPQRVGAVERDVKVPLYQGAPDDIHLAVVSAGSSHSASISRRGELYTWG 246

Query: 374 DGIHNLGLLGQVSEISH--WIPRKVS-----GQMEGLQISSICCGPWHTAAITSAGKLFT 426
                   L    E+ H  W P +VS       ++  +I S+ CG  HT AI+  G+L++
Sbjct: 247 --------LASSGELGHGGWTPIEVSCPRMITSLQRTRIVSVSCGANHTLAISETGQLWS 298

Query: 427 FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            G G  G LGHG      +   V+T++  + V  + G  H+ A+             +  
Sbjct: 299 CGRGRHGQLGHGHFHDEGLLMLVDTIRHERVVSVAAGRAHSVALA------------ADG 346

Query: 487 KLFTWGDGAEGQLGHGDAE-----PRVVPLCVKVSDDIS------------FCKVACGHS 529
           K+FTWGD ++GQLGH         P   PL +     I                +A G  
Sbjct: 347 KIFTWGDASKGQLGHAQLAAVMQGPNPQPLSIPFPQAIQSLEPARLKPPARVTAIAAGGD 406

Query: 530 ITIALTATGQVFSMGSADYGQ--LGSPGSTGKF-PTRI------EGNIKHRYIEDIACGS 580
            ++A+T  G + + GS  +GQ  LG+  +  +  PT +      EG    R ++ + CG+
Sbjct: 407 HSMAVTVAGALLAFGSNKHGQARLGTGDTLDRMIPTEVPLALESEGGQLVRAMQ-VHCGA 465

Query: 581 YH---IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            H   +  V    +V + G  + G+LG GD   +     + AL+ K +  V  G    AA
Sbjct: 466 QHTLALVQVQGHHQVRSVGGNSYGELGLGDRLERHRFHPIPALKGKSIVCVSVGDWHNAA 525

Query: 638 IC 639
           IC
Sbjct: 526 IC 527



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 147/350 (42%), Gaps = 48/350 (13%)

Query: 227 DSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALL 286
           D   +++ SA SS S           G+++ WG      L  G    +E+S         
Sbjct: 219 DDIHLAVVSAGSSHS-----ASISRRGELYTWGLASSGELGHGGWTPIEVSC-------- 265

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+++ S       S++CG+ H + +++ GQ++S G G  G+LGHG   D     L+D + 
Sbjct: 266 PRMITSLQRTRIVSVSCGANHTLAISETGQLWSCGRGRHGQLGHGHFHDEGLLMLVDTIR 325

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV-----------SEISHWIPRK 395
              +  VA G  H+ A+   G ++TWGD   + G LG               +S   P+ 
Sbjct: 326 HERVVSVAAGRAHSVALAADGKIFTWGDA--SKGQLGHAQLAAVMQGPNPQPLSIPFPQA 383

Query: 396 VSGQMEG-----LQISSICCGPWHTAAITSAGKLFTFGDGTFGA--LGHGDRSSTSVPRE 448
           +            ++++I  G  H+ A+T AG L  FG    G   LG GD     +P E
Sbjct: 384 IQSLEPARLKPPARVTAIAAGGDHSMAVTVAGALLAFGSNKHGQARLGTGDTLDRMIPTE 443

Query: 449 VETLKE------LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG 502
           V    E      ++ +   CG  HT A+V+V G           ++ + G  + G+LG G
Sbjct: 444 VPLALESEGGQLVRAMQVHCGAQHTLALVQVQGH---------HQVRSVGGNSYGELGLG 494

Query: 503 DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
           D   R     +      S   V+ G     A+   G+++  G  D GQLG
Sbjct: 495 DRLERHRFHPIPALKGKSIVCVSVGDWHNAAICQDGRLYVWGRGDCGQLG 544



 Score = 59.3 bits (142), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 93/219 (42%), Gaps = 29/219 (13%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNG-----VEISSADRRDALLPKVLESTVVLDAQSIAC 303
           G +F WG+     LG+  L   + G     + I       +L P  L+    + A  IA 
Sbjct: 346 GKIFTWGDASKGQLGHAQLAAVMQGPNPQPLSIPFPQAIQSLEPARLKPPARVTA--IAA 403

Query: 304 GSKHAVLVTKQGQIFSWGEGSGG--KLGHGVEAD----VSYPKLIDALNGSNIH--MVAC 355
           G  H++ VT  G + ++G    G  +LG G   D       P  +++  G  +    V C
Sbjct: 404 GGDHSMAVTVAGALLAFGSNKHGQARLGTGDTLDRMIPTEVPLALESEGGQLVRAMQVHC 463

Query: 356 GEFHTCA-VTLSGDLYTWGDGIHNLGLLGQVSEIS----HWIPRKVSGQMEGLQISSICC 410
           G  HT A V + G       G ++ G LG    +     H IP      ++G  I  +  
Sbjct: 464 GAQHTLALVQVQGHHQVRSVGGNSYGELGLGDRLERHRFHPIP-----ALKGKSIVCVSV 518

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV 449
           G WH AAI   G+L+ +G G  G LG GD  +   P+++
Sbjct: 519 GDWHNAAICQDGRLYVWGRGDCGQLGLGDDRNRWAPKQL 557


>gi|74177548|dbj|BAB30989.3| unnamed protein product [Mus musculus]
          Length = 596

 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 166/328 (50%), Gaps = 28/328 (8%)

Query: 318 FSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH 377
           +S G+ S G+LG   +     P+ I ALN  ++ +V+CG+ H+ AV   G ++ WG G  
Sbjct: 1   YSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAGSE 60

Query: 378 NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH 437
               +G+  EIS ++P K+   + G++I  + CG +H+ A++  G +F++G  + G LG 
Sbjct: 61  GQLGIGEFKEIS-FMPTKIKA-LAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGL 118

Query: 438 GDRS-STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
           G  S S ++P++V++L+ +     + G  H+ A+       +G++       F WG    
Sbjct: 119 GKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL-----SLTGTS-------FGWGSNRS 166

Query: 497 GQL---GHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG- 552
           GQL   G+   E    P  +    ++S   ++CG+  T  LT  GQVF+ G    GQL  
Sbjct: 167 GQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQP 226

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKG----ANGQLGHGD 607
           SP S  + P  IEG I  R +  I C SYH IA V +  +V + G+G    +N       
Sbjct: 227 SPRSGQRGPQLIEG-IGGR-VSQIECASYHTIAYVYTTGQVVSLGRGPSHTSNPTHQEAP 284

Query: 608 NENKQTPTLV--EALRDKQVKSVVCGSN 633
            EN     L+  E L D +VK +  G++
Sbjct: 285 AENSDITCLLAAEDLVDIEVKDIFAGAH 312



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 131/263 (49%), Gaps = 20/263 (7%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDAL 345
           P+ +++   L    ++CG +H+V V  +G++F WG GS G+LG G   ++S+ P  I AL
Sbjct: 22  PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFPWGAGSEGQLGIGEFKEISFMPTKIKAL 81

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
            G  I  V+CG +H+ A++  G +++WG        LG+ S  S  IP+KV   +EG+ +
Sbjct: 82  AGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSR-SQAIPQKVKS-LEGIPL 139

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGAL---GHGDRSSTSVPREVETLKELKTVMASC 462
           + +  G  H+ A++  G  F +G    G L   G+  +     P  +  LK L  +  SC
Sbjct: 140 AQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISC 199

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK-VSDDISF 521
           G  HTA + E              ++FT+G  + GQL       +  P  ++ +   +S 
Sbjct: 200 GYEHTAVLTE------------EGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQ 247

Query: 522 CKVACGHSITIALTATGQVFSMG 544
            + A  H+I    T TGQV S+G
Sbjct: 248 IECASYHTIAYVYT-TGQVVSLG 269



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 116/253 (45%), Gaps = 18/253 (7%)

Query: 227 DSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALL 286
           +   + L S     S   CH+     G VF WG G   G LG            +  + +
Sbjct: 29  NDLHVDLVSCGKEHSVAVCHK-----GKVFPWGAG-SEGQLG--------IGEFKEISFM 74

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDAL 345
           P  +++   +    ++CG  H++ +++ G +FSWG  S G+LG G  +   + P+ + +L
Sbjct: 75  PTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL 134

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQ 404
            G  +  VA G  H+ A++L+G  + WG      L L G   +   + P  + G ++ L 
Sbjct: 135 EGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSI-GALKNLS 193

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +  I CG  HTA +T  G++FTFG  + G L    RS    P+ +E +   +     C  
Sbjct: 194 VIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECAS 252

Query: 465 WHTAAIVEVAGKT 477
           +HT A V   G+ 
Sbjct: 253 YHTIAYVYTTGQV 265



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 2/81 (2%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
           L    I+CG +H  ++T++GQ+F++G  S G+L     +    P+LI+ + G  +  + C
Sbjct: 192 LSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGG-RVSQIEC 250

Query: 356 GEFHTCA-VTLSGDLYTWGDG 375
             +HT A V  +G + + G G
Sbjct: 251 ASYHTIAYVYTTGQVVSLGRG 271


>gi|354485549|ref|XP_003504946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
           [Cricetulus griseus]
          Length = 887

 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 180/367 (49%), Gaps = 31/367 (8%)

Query: 278 SADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS 337
           +AD R    P+ L     L+    A G +H++L+    +++S G+ S G+LG   E +  
Sbjct: 6   AADSRQ---PRRLNGRDGLELLQAASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTE 62

Query: 338 YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
            P+ I AL   +I +V+CG+ H+ AV   G ++ WG G      +G+  EI+  +P ++ 
Sbjct: 63  QPEPIQALGTLDIDLVSCGKEHSIAVCHKGRVFAWGAGSEGQLGIGEFKEIN-LMPMRIK 121

Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-PREVETLKELK 456
             + G++I  + CG +H+ A++  G++F++G  + G LG G +SS+   P++V +L+ + 
Sbjct: 122 -TLGGIKIIQVSCGHYHSLALSEDGQVFSWGKNSQGQLGLGMQSSSQASPQKVTSLEGIP 180

Query: 457 TVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV---PLCV 513
               + G  H+ A+  + G + G           WG  + GQL        V    P  +
Sbjct: 181 LAQVAAGGSHSFAL-SLTGTSYG-----------WGSNSVGQLALSGENSTVQISKPHSI 228

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL-GSPGSTGKFPTRIEGNIKHRY 572
               ++    ++CG+  T  LT  GQVF+ G    GQL  +P    + P  +EG IK + 
Sbjct: 229 DALKNLGVIYISCGYEHTAVLTKDGQVFTFGDNSSGQLQNNPRGKRRGPQLVEG-IKGQ- 286

Query: 573 IEDIACGSYH-IAVVSSKSEVYTWGKG----ANGQLGHGDNENKQTPTLVEA--LRDKQV 625
           +  I CGSYH IA V +  +V + G G    +N        E+     L+ A  L D +V
Sbjct: 287 VSKIECGSYHTIAYVYTTGQVVSLGHGPRPTSNPTHQKAPAESSDIICLLSAADLVDVKV 346

Query: 626 KSVVCGS 632
           K +  G+
Sbjct: 347 KDIFAGA 353



 Score = 42.7 bits (99), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 2/87 (2%)

Query: 561 PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           P R+ G      ++  A G  H  ++ S   VY+ G  + GQLG    +N + P  ++AL
Sbjct: 12  PRRLNGRDGLELLQ-AASGERHSLLLFSNHRVYSCGDNSLGQLGQKREQNTEQPEPIQAL 70

Query: 621 RDKQVKSVVCGSNFTAAICLHKGVSIA 647
               +  V CG   + A+C HKG   A
Sbjct: 71  GTLDIDLVSCGKEHSIAVC-HKGRVFA 96


>gi|55742244|ref|NP_001006906.1| NIMA-related kinase 8 [Xenopus (Silurana) tropicalis]
 gi|49670682|gb|AAH75274.1| NIMA (never in mitosis gene a)- related kinase 8 [Xenopus
           (Silurana) tropicalis]
          Length = 697

 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 149/339 (43%), Gaps = 42/339 (12%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           +++WG G            +S P  +  LN + +  V+ G      VT SG L  W    
Sbjct: 321 VYTWGSG------------ISTPLRLPMLN-TEVVQVSAGRTQKAGVTKSGRLIMWEATP 367

Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEG---LQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
              G       I H  P+ +S  +EG   + I  + CG   TA +T  G + TFG G+ G
Sbjct: 368 VGTGAPSLPGSIEHAQPQFISRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNG 427

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
            LGH + +  + P+ VE L   + V  SCG  H  A+         SN    K++F+WG 
Sbjct: 428 CLGHANFNDVTQPKIVEDLLGYEIVHVSCGASHAIAV---------SN---EKEVFSWGR 475

Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS 553
           G  G+LG G  E    P  V +  +    +V CG   ++ LT   Q+ + GS  + +LG 
Sbjct: 476 GDNGRLGLGSQESYNSPQQVIIPPEYEAQRVVCGIDSSMILTVANQLLACGSNRFNKLGF 535

Query: 554 PGSTGKFPTRIEGNIKHRYI-----------EDIAC---GSYHIAVVSSKSEVYTWGKGA 599
                      E  ++  Y            E I C   G+ H AVV++  + YT+G   
Sbjct: 536 DRILSASEPSSEDQVEEAYTFTPIQSAPLNQEAILCADVGTSHSAVVTALGQCYTFGSNQ 595

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +GQLG   + N + P LV AL+  +V  V CG  +T A+
Sbjct: 596 HGQLGTSAHRNSRVPCLVSALQGVKVTMVACGDAYTVAV 634



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 144/313 (46%), Gaps = 8/313 (2%)

Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
            + + LE    +  + ++CG      +T +G I ++G GS G LGH    DV+ PK+++ 
Sbjct: 386 FISRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHANFNDVTQPKIVED 445

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           L G  I  V+CG  H  AV+   ++++WG G  + G LG  S+ S+  P++V    E  +
Sbjct: 446 LLGYEIVHVSCGASHAIAVSNEKEVFSWGRG--DNGRLGLGSQESYNSPQQVIIPPE-YE 502

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV--MASC 462
              + CG   +  +T A +L   G   F  LG     S S P   + ++E  T   + S 
Sbjct: 503 AQRVVCGIDSSMILTVANQLLACGSNRFNKLGFDRILSASEPSSEDQVEEAYTFTPIQSA 562

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
            +   A +    G +  +   +  + +T+G    GQLG        VP  V     +   
Sbjct: 563 PLNQEAILCADVGTSHSAVVTALGQCYTFGSNQHGQLGTSAHRNSRVPCLVSALQGVKVT 622

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIAC--G 579
            VACG + T+A+ A GQVF+ G    G+LG        P  ++    H Y +  +AC  G
Sbjct: 623 MVACGDAYTVAVGAEGQVFTWGKGARGRLGRRDEGIGIPKIVQLEENHSYVVTSVACCHG 682

Query: 580 SYHIAVVSSKSEV 592
           +  +AV  S  ++
Sbjct: 683 NTLLAVKPSLEDI 695



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 135/297 (45%), Gaps = 44/297 (14%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +  +G G  NG LG          A+  D   PK++E  +  +   ++CG+ HA+ V+
Sbjct: 416 GIIMTFGSG-SNGCLG---------HANFNDVTQPKIVEDLLGYEIVHVSCGASHAIAVS 465

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            + ++FSWG G  G+LG G +   + P+ +          V CG   +  +T++  L   
Sbjct: 466 NEKEVFSWGRGDNGRLGLGSQESYNSPQQVIIPPEYEAQRVVCGIDSSMILTVANQLLAC 525

Query: 373 GDGIHN-LGL-----------LGQVSEISHWIPRKVSGQMEGLQISSICC---GPWHTAA 417
           G    N LG              QV E   + P     Q   L   +I C   G  H+A 
Sbjct: 526 GSNRFNKLGFDRILSASEPSSEDQVEEAYTFTPI----QSAPLNQEAILCADVGTSHSAV 581

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +T+ G+ +TFG    G LG     ++ VP  V  L+ +K  M +CG  +T A+       
Sbjct: 582 VTALGQCYTFGSNQHGQLGTSAHRNSRVPCLVSALQGVKVTMVACGDAYTVAV------- 634

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC--KVACGHSITI 532
            G+ G    ++FTWG GA G+LG  D E   +P  V++ ++ S+    VAC H  T+
Sbjct: 635 -GAEG----QVFTWGKGARGRLGRRD-EGIGIPKIVQLEENHSYVVTSVACCHGNTL 685



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 173/397 (43%), Gaps = 53/397 (13%)

Query: 252 LGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           L  V+ WG G              IS+  R   L  +V++         ++ G      V
Sbjct: 318 LSSVYTWGSG--------------ISTPLRLPMLNTEVVQ---------VSAGRTQKAGV 354

Query: 312 TKQGQIFSW-----GEGSG---GKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAV 363
           TK G++  W     G G+    G + H     +S  + ++  +G  I  V+CG+  T  +
Sbjct: 355 TKSGRLIMWEATPVGTGAPSLPGSIEHAQPQFIS--RFLEGQSGVTIKHVSCGDLFTACL 412

Query: 364 TLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGK 423
           T  G + T+G G +  G LG  +  +     K+   + G +I  + CG  H  A+++  +
Sbjct: 413 TDRGIIMTFGSGSN--GCLGH-ANFNDVTQPKIVEDLLGYEIVHVSCGASHAIAVSNEKE 469

Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK--TSGSN 481
           +F++G G  G LG G + S + P++V    E +     CG+  ++ I+ VA +    GSN
Sbjct: 470 VFSWGRGDNGRLGLGSQESYNSPQQVIIPPEYEAQRVVCGI-DSSMILTVANQLLACGSN 528

Query: 482 GLSS----KKLFTWGDGAEGQL--GHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
             +     + L      +E Q+   +     +  PL     + I    V   HS  +  T
Sbjct: 529 RFNKLGFDRILSASEPSSEDQVEEAYTFTPIQSAPLN---QEAILCADVGTSHSAVV--T 583

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
           A GQ ++ GS  +GQLG+          +   ++   +  +ACG  +   V ++ +V+TW
Sbjct: 584 ALGQCYTFGSNQHGQLGTSAHRNSRVPCLVSALQGVKVTMVACGDAYTVAVGAEGQVFTW 643

Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQ--VKSVVC 630
           GKGA G+LG  D E    P +V+   +    V SV C
Sbjct: 644 GKGARGRLGRRD-EGIGIPKIVQLEENHSYVVTSVAC 679



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 97/200 (48%), Gaps = 18/200 (9%)

Query: 470 IVEV-AGKTSGSNGLSSKKLFTW-----GDGAE---GQLGHGDAEPRVVPLCVKVSDDIS 520
           +V+V AG+T  +    S +L  W     G GA    G + H  A+P+ +   ++    ++
Sbjct: 341 VVQVSAGRTQKAGVTKSGRLIMWEATPVGTGAPSLPGSIEH--AQPQFISRFLEGQSGVT 398

Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS 580
              V+CG   T  LT  G + + GS   G LG          +I  ++    I  ++CG+
Sbjct: 399 IKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHANFNDVTQPKIVEDLLGYEIVHVSCGA 458

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
            H   VS++ EV++WG+G NG+LG G  E+  +P  V    + + + VVCG + +  +  
Sbjct: 459 SHAIAVSNEKEVFSWGRGDNGRLGLGSQESYNSPQQVIIPPEYEAQRVVCGIDSSMIL-- 516

Query: 641 HKGVSIADHSICSGCRNQFN 660
               ++A+  +  G  N+FN
Sbjct: 517 ----TVANQLLACG-SNRFN 531


>gi|449446943|ref|XP_004141229.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 491

 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 158/339 (46%), Gaps = 24/339 (7%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGH-GVEADVSYPKLIDALNGSNIHMVACG 356
            + ++    HA  VT+ GQ+F+ G+ S    GH      +  P+L++ALNG     V+ G
Sbjct: 165 VEQVSASHNHAAFVTQSGQVFTCGDNSSFCCGHRDTSCRIFRPRLVEALNGIPCKQVSVG 224

Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
              +  +T  G +YT G   +  G LG  + +    P+ V   +E   +  I  GP +  
Sbjct: 225 HNFSVFLTRQGHVYTCGTNTY--GQLGHGNTLEGPTPKIVQRLVEIGSVIQIAAGPSYVL 282

Query: 417 AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET--LKELKTVMASCGVWHTAAIVEVA 474
           A+ + G++++FG G+   LGHG++ +   PR ++T  LK +  V  S G  H  A+    
Sbjct: 283 AVVNDGRVYSFGSGSNFCLGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVAL---- 338

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                SNGL    ++TWG G  G LGHGD   + +P  +    +    +V      T  L
Sbjct: 339 ----DSNGL----VYTWGKGYCGALGHGDEIDKTIPQPLNSLKNHLAVQVCARKRKTFVL 390

Query: 535 TATGQVFSMGSADYGQLGSP--GSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
             TG V+  G   +G LG P  G + K   P  ++    HR +  I+ G YH  VV+ K 
Sbjct: 391 VDTGIVYGFGWMGFGSLGFPDRGVSDKVLRPRSLDSLRVHR-VSQISTGLYHTVVVTEKG 449

Query: 591 EVYTWGKGANGQLGHGDNENKQTPT--LVEALRDKQVKS 627
           +++ +G     QLGH        PT   +  L D+ + S
Sbjct: 450 KIFGFGDNERAQLGHESLRGCLEPTEIFIHDLDDESIVS 488



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 112/237 (47%), Gaps = 21/237 (8%)

Query: 287 PKVLESTVVLDAQ-SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
           PK+++  V + +   IA G  + + V   G+++S+G GS   LGHG + +   P+++   
Sbjct: 259 PKIVQRLVEIGSVIQIAAGPSYVLAVVNDGRVYSFGSGSNFCLGHGEQHNEFQPRVLQTF 318

Query: 346 NGSNIHMVAC--GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
              NIH+V+   G+ H  A+  +G +YTWG G    G LG   EI   IP+ ++     L
Sbjct: 319 RLKNIHVVSVSAGDEHAVALDSNGLVYTWGKGY--CGALGHGDEIDKTIPQPLNSLKNHL 376

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV---PREVETLKELKTVMA 460
            +  +C     T  +   G ++ FG   FG+LG  DR  +     PR +++L+  +    
Sbjct: 377 AV-QVCARKRKTFVLVDTGIVYGFGWMGFGSLGFPDRGVSDKVLRPRSLDSLRVHRVSQI 435

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
           S G++HT  + E              K+F +GD    QLGH      + P  + + D
Sbjct: 436 STGLYHTVVVTE------------KGKIFGFGDNERAQLGHESLRGCLEPTEIFIHD 480



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 135/283 (47%), Gaps = 18/283 (6%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+++E+   +  + ++ G   +V +T+QG +++ G  + G+LGHG   +   PK++  L 
Sbjct: 207 PRLVEALNGIPCKQVSVGHNFSVFLTRQGHVYTCGTNTYGQLGHGNTLEGPTPKIVQRLV 266

Query: 347 --GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV-SGQMEGL 403
             GS I  +A G  +  AV   G +Y++G G +    LG   + + + PR + + +++ +
Sbjct: 267 EIGSVIQ-IAAGPSYVLAVVNDGRVYSFGSGSNF--CLGHGEQHNEFQPRVLQTFRLKNI 323

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
            + S+  G  H  A+ S G ++T+G G  GALGHGD    ++P+ + +LK    V     
Sbjct: 324 HVVSVSAGDEHAVALDSNGLVYTWGKGYCGALGHGDEIDKTIPQPLNSLKNHLAVQVCAR 383

Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTW-GDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
              T  +V+  G   G         F W G G+ G    G ++  + P  +         
Sbjct: 384 KRKTFVLVD-TGIVYG---------FGWMGFGSLGFPDRGVSDKVLRPRSLDSLRVHRVS 433

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRI 564
           +++ G   T+ +T  G++F  G  +  QLG     G   PT I
Sbjct: 434 QISTGLYHTVVVTEKGKIFGFGDNERAQLGHESLRGCLEPTEI 476



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 114/252 (45%), Gaps = 30/252 (11%)

Query: 384 QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           Q+ E S  I     G M+      I  G +HT  I S G +++ G    G LGHG  ++ 
Sbjct: 98  QLVEKSSNIVETSEGNMQ------IATGRYHTLLI-SNGSVYSCGSSLCGVLGHGSETTQ 150

Query: 444 SVP-REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG 502
            V    +     +     S    H A + +            S ++FT GD +    GH 
Sbjct: 151 CVTFTRINFPPSIYVEQVSASHNHAAFVTQ------------SGQVFTCGDNSSFCCGHR 198

Query: 503 DAEPRVV-PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFP 561
           D   R+  P  V+  + I   +V+ GH+ ++ LT  G V++ G+  YGQLG  G+T + P
Sbjct: 199 DTSCRIFRPRLVEALNGIPCKQVSVGHNFSVFLTRQGHVYTCGTNTYGQLGH-GNTLEGP 257

Query: 562 TRIEGNIKHRYIE-----DIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTL 616
           T     I  R +E      IA G  ++  V +   VY++G G+N  LGHG+  N+  P +
Sbjct: 258 TP---KIVQRLVEIGSVIQIAAGPSYVLAVVNDGRVYSFGSGSNFCLGHGEQHNEFQPRV 314

Query: 617 VEALRDKQVKSV 628
           ++  R K +  V
Sbjct: 315 LQTFRLKNIHVV 326



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 70/188 (37%), Gaps = 13/188 (6%)

Query: 190 SFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDF 249
           S+  A     R  S     NF    G      +     +FR+     VS S+        
Sbjct: 279 SYVLAVVNDGRVYSFGSGSNFCLGHGEQHNEFQPRVLQTFRLKNIHVVSVSAGDEHAVAL 338

Query: 250 DGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAV 309
           D  G V+ WG+G    L             D  D  +P+ L S     A  +    +   
Sbjct: 339 DSNGLVYTWGKGYCGAL----------GHGDEIDKTIPQPLNSLKNHLAVQVCARKRKTF 388

Query: 310 LVTKQGQIFSWGEGSGGKLG---HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
           ++   G ++ +G    G LG    GV   V  P+ +D+L    +  ++ G +HT  VT  
Sbjct: 389 VLVDTGIVYGFGWMGFGSLGFPDRGVSDKVLRPRSLDSLRVHRVSQISTGLYHTVVVTEK 448

Query: 367 GDLYTWGD 374
           G ++ +GD
Sbjct: 449 GKIFGFGD 456


>gi|145508381|ref|XP_001440140.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124407346|emb|CAK72743.1| unnamed protein product [Paramecium tetraurelia]
          Length = 887

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 147/325 (45%), Gaps = 49/325 (15%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLD----AQSIACGSKHAVL 310
           +F+  EGL N    G ++ +     D  D    +   +    D     ++I  G KH V 
Sbjct: 41  LFVIEEGLDNQ---GIISTLHSPEHDEYDQTFSQDSNNLQSFDFKGSIKTIVTGKKHTVF 97

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           ++ QG I+S+G G  G LGHG   ++S PK I  +  S +  +ACGE+HT A++ +GD++
Sbjct: 98  LSDQGDIYSYGYGEYGALGHGGIIELSIPKKIIRI--SKVDTIACGEYHTLALS-NGDIF 154

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            WG G    G LG   ++               +I  I CG +H+ A+   G L+ +G+ 
Sbjct: 155 AWGRGFE--GQLGIRKDVETAASPMFLSYFYKNRIQLIACGAYHSLAVDQQGALYGWGEA 212

Query: 431 TFGALGHGDRSSTSVPREVETLKE-------------------LKTVMASCGVWHTAAIV 471
            FG LG G + S  +P  ++ L E                    + V  S G  H+AA+ 
Sbjct: 213 RFGQLGTGRKVSEQLPSRIDFLLEKPMNQSELRVGKFLPQETSFQVVSISGGYGHSAAVT 272

Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS------FCKVA 525
                       S+ +L+TWG    GQLG+GD + +      ++  DIS      F KV 
Sbjct: 273 ------------STGELYTWGFNQRGQLGNGDKDKKSSYYPKRLMQDISGIQLPGFSKVM 320

Query: 526 CGHSITIALTATGQVFSMGSADYGQ 550
           CG+  T A+   G ++S G  + G 
Sbjct: 321 CGYYTTYAIDQKGGLWSWGGGNLGH 345



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 41/260 (15%)

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           I +I  G  HT  ++  G ++++G G +GALGHG     S+P+++  + ++ T+  +CG 
Sbjct: 85  IKTIVTGKKHTVFLSDQGDIYSYGYGEYGALGHGGIIELSIPKKIIRISKVDTI--ACGE 142

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCK 523
           +HT A             LS+  +F WG G EGQLG   D E    P+ +          
Sbjct: 143 YHTLA-------------LSNGDIFAWGRGFEGQLGIRKDVETAASPMFLSYFYKNRIQL 189

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRY---------- 572
           +ACG   ++A+   G ++  G A +GQLG+      + P+RI+  ++             
Sbjct: 190 IACGAYHSLAVDQQGALYGWGEARFGQLGTGRKVSEQLPSRIDFLLEKPMNQSELRVGKF 249

Query: 573 --------IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ 624
                   +  I+ G  H A V+S  E+YTWG    GQLG+GD + K +      ++D  
Sbjct: 250 LPQETSFQVVSISGGYGHSAAVTSTGELYTWGFNQRGQLGNGDKDKKSSYYPKRLMQDIS 309

Query: 625 ------VKSVVCGSNFTAAI 638
                    V+CG   T AI
Sbjct: 310 GIQLPGFSKVMCGYYTTYAI 329



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 102/221 (46%), Gaps = 38/221 (17%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           GD+F WG G   G LG           D   A  P  L        Q IACG+ H++ V 
Sbjct: 151 GDIFAWGRGF-EGQLG--------IRKDVETAASPMFLSYFYKNRIQLIACGAYHSLAVD 201

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL-----NGSNIHM--------------V 353
           +QG ++ WGE   G+LG G +     P  ID L     N S + +              +
Sbjct: 202 QQGALYGWGEARFGQLGTGRKVSEQLPSRIDFLLEKPMNQSELRVGKFLPQETSFQVVSI 261

Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQ--VSEISHWIPRKVSGQMEGLQI---SSI 408
           + G  H+ AVT +G+LYTW  G +  G LG     + S + P+++   + G+Q+   S +
Sbjct: 262 SGGYGHSAAVTSTGELYTW--GFNQRGQLGNGDKDKKSSYYPKRLMQDISGIQLPGFSKV 319

Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV 449
            CG + T AI   G L+++G G    LGH +     +PR++
Sbjct: 320 MCGYYTTYAIDQKGGLWSWGGGN---LGHQNDKLVDLPRKI 357



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/323 (23%), Positives = 142/323 (43%), Gaps = 48/323 (14%)

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
           I  +  G+ HT  ++  GD+Y++G G +  G LG    I   IP+K+   +   ++ +I 
Sbjct: 85  IKTIVTGKKHTVFLSDQGDIYSYGYGEY--GALGHGGIIELSIPKKI---IRISKVDTIA 139

Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALG-HGDRSSTSVPREVETLKELKTVMASCGVWHTA 468
           CG +HT A+ S G +F +G G  G LG   D  + + P  +    + +  + +CG +H+ 
Sbjct: 140 CGEYHTLAL-SNGDIFAWGRGFEGQLGIRKDVETAASPMFLSYFYKNRIQLIACGAYHSL 198

Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK-------------- 514
           A+ +               L+ WG+   GQLG G      +P  +               
Sbjct: 199 AVDQQGA------------LYGWGEARFGQLGTGRKVSEQLPSRIDFLLEKPMNQSELRV 246

Query: 515 ---VSDDISF--CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK---FPTRIEG 566
              +  + SF    ++ G+  + A+T+TG++++ G    GQLG+     K   +P R+  
Sbjct: 247 GKFLPQETSFQVVSISGGYGHSAAVTSTGELYTWGFNQRGQLGNGDKDKKSSYYPKRLMQ 306

Query: 567 NIKHRYI---EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDK 623
           +I    +     + CG Y    +  K  +++WG    G LGH +++    P  +  L D+
Sbjct: 307 DISGIQLPGFSKVMCGYYTTYAIDQKGGLWSWG---GGNLGHQNDKLVDLPRKI-VLEDR 362

Query: 624 QVKSVVCGSNFTAAICLHKGVSI 646
           +  ++       A     + +S+
Sbjct: 363 KFTNMYANGQAAAFFASLRTISM 385


>gi|42573750|ref|NP_974971.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332010006|gb|AED97389.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 383

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 159/314 (50%), Gaps = 38/314 (12%)

Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
           P  IDA + S    ++CG FH+  +T+ GDL+ WG G  + G LG   E S ++P  ++ 
Sbjct: 23  PGRIDADSSSFRIGISCGLFHS-GLTIDGDLWIWGKG--DGGRLGFGQENSVFVP-NLNP 78

Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELK-T 457
             E   I  I  G  H+ A+T  G +FT+G G FGALGH   +   VPR V+   + K +
Sbjct: 79  LFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKIS 138

Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQL------------GHGDAE 505
            +A+ G  HTAAI E            S +L+ WG   EG              G G + 
Sbjct: 139 AIATSGT-HTAAITE------------SGELYMWGR-EEGDGRLGLGPGRGPNEGGGLSV 184

Query: 506 P-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRI 564
           P +V  L V V+       V+CG   T+ALT  GQ+++ G+    +LG   + G +    
Sbjct: 185 PSKVKALTVPVA------SVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMP 238

Query: 565 EGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ 624
             +++   I  IACG YH   ++ + +V +WG G +GQLG     N++ PT +EAL DK+
Sbjct: 239 VPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKK 298

Query: 625 VKSVVCGSNFTAAI 638
           +  +  G + +AAI
Sbjct: 299 IVFIASGGSSSAAI 312



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 182/407 (44%), Gaps = 61/407 (14%)

Query: 206 KSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNG 265
           +S +   + G  DA+S      SFRI +S        G  H      GD++IWG+G G  
Sbjct: 15  QSFSLAQTPGRIDADS-----SSFRIGISC-------GLFHSGLTIDGDLWIWGKGDGGR 62

Query: 266 LLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSG 325
           L  G  N V + +      L P   E ++    + IA G  H+V +T QG +F+WG G  
Sbjct: 63  LGFGQENSVFVPN------LNPLFEEHSI----RCIALGGLHSVALTHQGDVFTWGYGGF 112

Query: 326 GKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW----GDGIHNLGL 381
           G LGH V      P+ +D      I  +A    HT A+T SG+LY W    GDG   LG 
Sbjct: 113 GALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYMWGREEGDGRLGLGP 172

Query: 382 LGQVSE---ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG 438
               +E   +S  +P KV      + ++S+ CG + T A+T  G+L+ +G  +   LG G
Sbjct: 173 GRGPNEGGGLS--VPSKVKALT--VPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRG 228

Query: 439 DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ 498
           D      P  V +L+ ++    +CG +H+ A+ E              K+ +WG G  GQ
Sbjct: 229 DNLGGWEPMPVPSLEGVRITQIACGGYHSLALTE------------EGKVLSWGHGGHGQ 276

Query: 499 LGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIA-------LTATGQVFSMGSADYGQL 551
           LG      + VP  ++   D     +A G S + A       LT  G+++  G+A   QL
Sbjct: 277 LGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITGWDWFLTDGGELWMWGNAKDFQL 336

Query: 552 GSPGSTGKFPTRIEGNI--------KHRYIEDIACGSYHIAVVSSKS 590
           G PG      T +E N          H+ I  I+ G+ H   + S+S
Sbjct: 337 GVPGLPEIQTTPVEVNFLTEEDECQPHKVI-SISIGASHALCLVSRS 382


>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
           carolinensis]
          Length = 526

 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 152/295 (51%), Gaps = 21/295 (7%)

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF-HTCAVTLS 366
            + VT+  ++F+ G    G LG G   +   P+ +D L G  I  ++ G   H    T  
Sbjct: 34  VLYVTENNEVFALGTNCSGCLGVGDTQNSVEPRRLDTLCGKKITCLSYGSGPHVVVATAE 93

Query: 367 GDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
           G++YTWG   HN    LG  +  +  +P ++S  +   +++ + CG  H+  +TS G+++
Sbjct: 94  GEVYTWG---HNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEVY 150

Query: 426 TFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           T+G    G +G G  ++ ++PR V + L+    V  +CG   + A+VE        NG  
Sbjct: 151 TWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVE--------NG-- 200

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
             +++ WG    GQLG G++  +  P  +     I   +VACG++ T+ LT  GQ+++ G
Sbjct: 201 --EVYVWGYNGNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAWG 258

Query: 545 SADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSK-SEVYTWGK 597
           +  YGQLG+   + + +P  I  + K R IE  AC S H +   ++ S+VY WG+
Sbjct: 259 ANSYGQLGTGNRSNQSYPVPITVD-KDRVIEIAACHSAHTSAAKTQGSQVYMWGQ 312



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 111/226 (49%), Gaps = 19/226 (8%)

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +T   ++F  G    G LG GD  ++  PR ++TL   K    S G      +    G+ 
Sbjct: 37  VTENNEVFALGTNCSGCLGVGDTQNSVEPRRLDTLCGKKITCLSYGSGPHVVVATAEGE- 95

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI---SFCKVACGHSITIAL 534
                     ++TWG  A  QLG+G     ++P   ++S ++      +VACG   ++ L
Sbjct: 96  ----------VYTWGHNAYSQLGNGTTNNSLLP--CQISTNLVNKKVTEVACGSHHSMIL 143

Query: 535 TATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
           T+ G+V++ G  + GQ+GS GST     P R+   ++++   +IACG      V    EV
Sbjct: 144 TSDGEVYTWGYNNSGQVGS-GSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAVVENGEV 202

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           Y WG   NGQLG G++ N+ TP  + AL+  +V+ V CG   T  +
Sbjct: 203 YVWGYNGNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVL 248



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 128/271 (47%), Gaps = 23/271 (8%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGS----KHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           D ++++ P+ L++   L  + I C S     H V+ T +G++++WG  +  +LG+G   +
Sbjct: 58  DTQNSVEPRRLDT---LCGKKITCLSYGSGPHVVVATAEGEVYTWGHNAYSQLGNGTTNN 114

Query: 336 VSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
              P  I   L    +  VACG  H+  +T  G++YTWG   +N G +G  S  +  IPR
Sbjct: 115 SLLPCQISTNLVNKKVTEVACGSHHSMILTSDGEVYTWG--YNNSGQVGSGSTANQAIPR 172

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           +V+  ++     +I CG   + A+   G+++ +G    G LG G+  +   P  +  L+ 
Sbjct: 173 RVTSCLQNKIAVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQG 232

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
           ++    +CG  HT  + +              +++ WG  + GQLG G+   +  P+ + 
Sbjct: 233 IRVQRVACGYAHTLVLTD------------EGQMYAWGANSYGQLGTGNRSNQSYPVPIT 280

Query: 515 VSDDISFCKVACGHSITIALTATG-QVFSMG 544
           V  D      AC  + T A    G QV+  G
Sbjct: 281 VDKDRVIEIAACHSAHTSAAKTQGSQVYMWG 311



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 118/234 (50%), Gaps = 25/234 (10%)

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAA 469
           GP H    T+ G+++T+G   +  LG+G  +++ +P ++ T L   K    +CG  H+  
Sbjct: 84  GP-HVVVATAEGEVYTWGHNAYSQLGNGTTNNSLLPCQISTNLVNKKVTEVACGSHHSMI 142

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG----DAEPRVVPLCVKVSDDISFCKVA 525
           +             S  +++TWG    GQ+G G     A PR V  C++    ++   +A
Sbjct: 143 LT------------SDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKIAVN---IA 187

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHI 583
           CG   ++A+   G+V+  G    GQLG  G++G  PT  RI   ++   ++ +ACG  H 
Sbjct: 188 CGQMCSMAVVENGEVYVWGYNGNGQLGL-GNSGNQPTPCRIAA-LQGIRVQRVACGYAHT 245

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            V++ + ++Y WG  + GQLG G+  N+  P  +   +D+ ++   C S  T+A
Sbjct: 246 LVLTDEGQMYAWGANSYGQLGTGNRSNQSYPVPITVDKDRVIEIAACHSAHTSA 299



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 15/178 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLD-AQSIACGSKHAVLV 311
           G+V+ WG            N  ++ S    +  +P+ + S +    A +IACG   ++ V
Sbjct: 147 GEVYTWGYN----------NSGQVGSGSTANQAIPRRVTSCLQNKIAVNIACGQMCSMAV 196

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            + G+++ WG    G+LG G   +   P  I AL G  +  VACG  HT  +T  G +Y 
Sbjct: 197 VENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQMYA 256

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT-AAITSAGKLFTFG 428
           WG   +     G  S  S+ +P  V  +   ++I++  C   HT AA T   +++ +G
Sbjct: 257 WGANSYGQLGTGNRSNQSYPVPITVD-KDRVIEIAA--CHSAHTSAAKTQGSQVYMWG 311


>gi|50978834|ref|NP_001003126.1| X-linked retinitis pigmentosa GTPase regulator [Canis lupus
           familiaris]
 gi|23396836|sp|Q9N1T2.1|RPGR_CANFA RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
           Flags: Precursor
 gi|8131936|gb|AAF73144.1|AF148801_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 1003

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 168/348 (48%), Gaps = 47/348 (13%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H  +VT   +++ +G  + G+LG G ++ VS P  + AL    +   ACG  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEIS--HWIPRKVSGQMEGLQISSICCGPWHTAAI 418
              T  G +Y  G        LG   E S  H I    S +    +I  +  G   +AA+
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQR----KIKQLSAGSNTSAAL 155

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           T  G+LF +GD + G +G  + ++  VP++V   K +  +  SCG +H+A +      T 
Sbjct: 156 TEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWI--SCGYYHSAFVT-----TE 208

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDA------EPRVVP-LCVKVSDDISFCKVACGHSIT 531
           G       +L+T+G+   G+LG  +        P+ VP +  KV       +VACG   T
Sbjct: 209 G-------QLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKV------VQVACGGGHT 255

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAV 585
           + LT    V++ G   +GQLG     G F      P  IE +IK + I  IACG  H A+
Sbjct: 256 VVLTEKA-VYTFGLGQFGQLG----LGTFLFETSVPKAIE-HIKDQKISFIACGENHTAL 309

Query: 586 VSSKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
           ++    +YT+G G +G+LG G  ++ N+  PTL        V+ V CG
Sbjct: 310 ITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCG 357



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 126/276 (45%), Gaps = 50/276 (18%)

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
           + CG  HTA +T   KL+ FG   +G LG G +S+ S P  V+ LK  K   A+CG  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 468 AAIVE------VAGKTSGSNGL----------------SSKK------------------ 487
               E        G   G  GL                S +K                  
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDG 159

Query: 488 -LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
            LF WGD +EGQ+G  +     VP  V V   IS+  ++CG+  +  +T  GQ+++ G  
Sbjct: 160 ELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISW--ISCGYYHSAFVTTEGQLYTFGEP 217

Query: 547 DYGQLGSPGS---TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           + G+LG P       + P  + G I  + ++ +ACG  H  V++ K+ VYT+G G  GQL
Sbjct: 218 ECGKLGLPNQLLVNHRMPQPVPG-IPGKVVQ-VACGGGHTVVLTEKA-VYTFGLGQFGQL 274

Query: 604 GHGDNE-NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G G        P  +E ++D+++  + CG N TA I
Sbjct: 275 GLGTFLFETSVPKAIEHIKDQKISFIACGENHTALI 310



 Score = 48.9 bits (115), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS--YPKLID 343
           +PK +E         IACG  H  L+T  G ++++G+G  GKLG G+E   +   P L  
Sbjct: 285 VPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCS 344

Query: 344 ALNGSNIHMVACGEFHT 360
                 + +V+CG  HT
Sbjct: 345 NFLRFIVQLVSCGGCHT 361


>gi|237840751|ref|XP_002369673.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211967337|gb|EEB02533.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221503319|gb|EEE29017.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii VEG]
          Length = 1015

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 158/374 (42%), Gaps = 75/374 (20%)

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
           +++ P+L+DAL   N   V+ G      V  SG+LY W  G ++ G LG        +PR
Sbjct: 120 EMASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMW--GANSEGQLGTGDRRDASVPR 177

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG-HGDRSSTSV-------- 445
            V   + G  + ++ C   HT      G  + +G    G LG HG    +S         
Sbjct: 178 LVK-ALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPA 236

Query: 446 ----------------PREVETLKELKTVMASCGVWHTAAI-VEVAGKTSGSNGLSSKKL 488
                           PR +E+L        +CG +H+A + +    +TS         L
Sbjct: 237 TGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTS---------L 287

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           FT G G  G+LGHGD E R +P  V   ++++   +ACG   T  +T+ G +++ G A +
Sbjct: 288 FTCGLGLNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAF 347

Query: 549 GQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ---- 602
           G+LG   + G    P  + G ++++ +  +A GS H A V++  E+YTWG+G  G     
Sbjct: 348 GKLGLGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGRRGNLTRF 407

Query: 603 ------------------------------LGHGDNE-NKQTPTLVEALRDKQVKSVVCG 631
                                         LGHGD E     P  + AL  K V  + C 
Sbjct: 408 FRGAWRRSLVSSSSTSFAETPTLHASSKTILGHGDPEVPPNRPACLRALNGKGVVQLSCA 467

Query: 632 SNFTAAICLHKGVS 645
           S FT A C  + VS
Sbjct: 468 STFTVAFCDPQRVS 481



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 148/348 (42%), Gaps = 91/348 (26%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++++WG          A +  ++ + DRRDA +P+++++      +++AC  +H V   
Sbjct: 152 GELYMWG----------ANSEGQLGTGDRRDASVPRLVKALHGKVVKAVACSQEHTVCCL 201

Query: 313 KQGQIFSWGEGSGGKLG-HGVEAD------------------------VSYPKLIDALNG 347
             G  ++WG    G+LG HG+                           V  P+++++L G
Sbjct: 202 DDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATGARPEPLASACAVCTPRVLESLCG 261

Query: 348 SNIHMVACGEFHTCAVTL----SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
             I  VACG +H+  + +       L+T G G++  G LG   E    +P  V   +E +
Sbjct: 262 YFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLN--GRLGHGDEEDRHLPTAVH-ALENV 318

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGD-RSSTSVPREVE-TLKELKTVMAS 461
            I++I CG  HTA +TSAG L+T+G   FG LG G  R S  +P+ V   L+    V  +
Sbjct: 319 NITAIACGAHHTACVTSAGTLYTWGGAAFGKLGLGSTRGSQLLPKHVSGPLRNKAVVSVA 378

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ----------------------- 498
            G  H+A +             +  +L+TWG G  G                        
Sbjct: 379 LGSQHSACVT------------TDGELYTWGQGRRGNLTRFFRGAWRRSLVSSSSTSFAE 426

Query: 499 -----------LGHGDAE-PRVVPLCVKVSDDISFCKVACGHSITIAL 534
                      LGHGD E P   P C++  +     +++C  + T+A 
Sbjct: 427 TPTLHASSKTILGHGDPEVPPNRPACLRALNGKGVVQLSCASTFTVAF 474



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 64/140 (45%), Gaps = 17/140 (12%)

Query: 243 GSCHEDFDGLGD-----VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLD 297
           G  H  F G+ +     +F  G GL NG LG           D  D  LP  + +   ++
Sbjct: 270 GPYHSAFLGIYEQDRTSLFTCGLGL-NGRLG---------HGDEEDRHLPTAVHALENVN 319

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDA-LNGSNIHMVAC 355
             +IACG+ H   VT  G +++WG  + GKLG G        PK +   L    +  VA 
Sbjct: 320 ITAIACGAHHTACVTSAGTLYTWGGAAFGKLGLGSTRGSQLLPKHVSGPLRNKAVVSVAL 379

Query: 356 GEFHTCAVTLSGDLYTWGDG 375
           G  H+  VT  G+LYTWG G
Sbjct: 380 GSQHSACVTTDGELYTWGQG 399


>gi|221482889|gb|EEE21220.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii GT1]
          Length = 1020

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 158/374 (42%), Gaps = 75/374 (20%)

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
           +++ P+L+DAL   N   V+ G      V  SG+LY W  G ++ G LG        +PR
Sbjct: 120 EMASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMW--GANSEGQLGTGDRRDASVPR 177

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG-HGDRSSTSV-------- 445
            V   + G  + ++ C   HT      G  + +G    G LG HG    +S         
Sbjct: 178 LVK-ALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPA 236

Query: 446 ----------------PREVETLKELKTVMASCGVWHTAAI-VEVAGKTSGSNGLSSKKL 488
                           PR +E+L        +CG +H+A + +    +TS         L
Sbjct: 237 TGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTS---------L 287

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           FT G G  G+LGHGD E R +P  V   ++++   +ACG   T  +T+ G +++ G A +
Sbjct: 288 FTCGLGLNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSAGTLYTWGGAAF 347

Query: 549 GQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ---- 602
           G+LG   + G    P  + G ++++ +  +A GS H A V++  E+YTWG+G  G     
Sbjct: 348 GKLGLGSTRGSQLLPKHVSGPLRNKAVVSVALGSQHSACVTTDGELYTWGQGRRGNLTRF 407

Query: 603 ------------------------------LGHGDNE-NKQTPTLVEALRDKQVKSVVCG 631
                                         LGHGD E     P  + AL  K V  + C 
Sbjct: 408 FRGAWRRSLVSSSSTSFAETPTLHASSKTILGHGDPEVPPNRPACLRALNGKGVVQLSCA 467

Query: 632 SNFTAAICLHKGVS 645
           S FT A C  + VS
Sbjct: 468 STFTVAFCDPQRVS 481



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 148/348 (42%), Gaps = 91/348 (26%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++++WG          A +  ++ + DRRDA +P+++++      +++AC  +H V   
Sbjct: 152 GELYMWG----------ANSEGQLGTGDRRDASVPRLVKALHGKVVKAVACSQEHTVCCL 201

Query: 313 KQGQIFSWGEGSGGKLG-HGVEAD------------------------VSYPKLIDALNG 347
             G  ++WG    G+LG HG+                           V  P+++++L G
Sbjct: 202 DDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATGARPEPLASACAVCTPRVLESLCG 261

Query: 348 SNIHMVACGEFHTCAVTL----SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
             I  VACG +H+  + +       L+T G G++  G LG   E    +P  V   +E +
Sbjct: 262 YFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLN--GRLGHGDEEDRHLPTAVH-ALENV 318

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGD-RSSTSVPREVE-TLKELKTVMAS 461
            I++I CG  HTA +TSAG L+T+G   FG LG G  R S  +P+ V   L+    V  +
Sbjct: 319 NITAIACGAHHTACVTSAGTLYTWGGAAFGKLGLGSTRGSQLLPKHVSGPLRNKAVVSVA 378

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ----------------------- 498
            G  H+A +             +  +L+TWG G  G                        
Sbjct: 379 LGSQHSACVT------------TDGELYTWGQGRRGNLTRFFRGAWRRSLVSSSSTSFAE 426

Query: 499 -----------LGHGDAE-PRVVPLCVKVSDDISFCKVACGHSITIAL 534
                      LGHGD E P   P C++  +     +++C  + T+A 
Sbjct: 427 TPTLHASSKTILGHGDPEVPPNRPACLRALNGKGVVQLSCASTFTVAF 474



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 64/140 (45%), Gaps = 17/140 (12%)

Query: 243 GSCHEDFDGLGD-----VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLD 297
           G  H  F G+ +     +F  G GL NG LG           D  D  LP  + +   ++
Sbjct: 270 GPYHSAFLGIYEQDRTSLFTCGLGL-NGRLG---------HGDEEDRHLPTAVHALENVN 319

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDA-LNGSNIHMVAC 355
             +IACG+ H   VT  G +++WG  + GKLG G        PK +   L    +  VA 
Sbjct: 320 ITAIACGAHHTACVTSAGTLYTWGGAAFGKLGLGSTRGSQLLPKHVSGPLRNKAVVSVAL 379

Query: 356 GEFHTCAVTLSGDLYTWGDG 375
           G  H+  VT  G+LYTWG G
Sbjct: 380 GSQHSACVTTDGELYTWGQG 399


>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1036

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 134/281 (47%), Gaps = 17/281 (6%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           + CG KH V +   G +++ G    G+LGH  E     P+ + AL+   I  V+CGE HT
Sbjct: 39  VGCGLKHTVFLLDDGTVYTCGCNDLGQLGH--EKSRKKPEHVVALDAQIIVAVSCGESHT 96

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+   G +++WG G +    L    E    +PR +   +  +QI+ + CG WH+ A++ 
Sbjct: 97  LALNDKGQVFSWGLGSNGQLGLNNFEECVR-VPRNIKC-LSDVQIAQVACGYWHSHALSK 154

Query: 421 AGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
            G++F++G   FG LG G   SS S P+ +++L+ +     S G  H+ AI         
Sbjct: 155 GGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAIT-------- 206

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                S  +F WG    GQLG  D + R  P  +K         V+CG   T ALT    
Sbjct: 207 ----LSGAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAALTKLRG 262

Query: 540 VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGS 580
           VF+ G+  YGQLG   +  +   R    +    +  I+CGS
Sbjct: 263 VFTFGAGGYGQLGHNCTNHEINPRKVFELMGNVVTQISCGS 303



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 155/320 (48%), Gaps = 21/320 (6%)

Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           +  WG  S G+LG G   E  V  P+  +  +G  +  V CG  HT  +   G +YT G 
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCG- 59

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             ++LG LG   E S   P  V   ++   I ++ CG  HT A+   G++F++G G+ G 
Sbjct: 60  -CNDLGQLGH--EKSRKKPEHVVA-LDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQ 115

Query: 435 LGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
           LG  +      VPR ++ L +++    +CG WH+ A+         S G    ++F+WG 
Sbjct: 116 LGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHAL---------SKG---GQVFSWGQ 163

Query: 494 GAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              GQLG G     +  P  ++    I F +++ G + + A+T +G VF  G   +GQLG
Sbjct: 164 NQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLG 223

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
              +  ++   +  +++ + +  ++CG  H A ++    V+T+G G  GQLGH    ++ 
Sbjct: 224 LNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLGHNCTNHEI 283

Query: 613 TPTLVEALRDKQVKSVVCGS 632
            P  V  L    V  + CGS
Sbjct: 284 NPRKVFELMGNVVTQISCGS 303



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 142/305 (46%), Gaps = 28/305 (9%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +  WG+  +    LG + E     PRK      G ++  + CG  HT  +   G ++T G
Sbjct: 1   MLCWGNASYGQLGLGGIDEEIVVEPRKCEF-FHGKRVCDVGCGLKHTVFLLDDGTVYTCG 59

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
               G LGH    S   P  V  L     V  SCG  HT A+ +              ++
Sbjct: 60  CNDLGQLGH--EKSRKKPEHVVALDAQIIVAVSCGESHTLALND------------KGQV 105

Query: 489 FTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           F+WG G+ GQLG  + E  V VP  +K   D+   +VACG+  + AL+  GQVFS G   
Sbjct: 106 FSWGLGSNGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQ 165

Query: 548 YGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
           +GQLG    GS+   P  I+ +++      ++ G  H   ++    V+ WGK   GQLG 
Sbjct: 166 FGQLGLGMHGSSISTPQIIQ-SLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQLGL 224

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRR 665
            D +++  P L+++LR ++V  V CG + TAA+   +GV     +  +G   Q       
Sbjct: 225 NDTKDRWFPALLKSLRSQRVIFVSCGEDHTAALTKLRGV----FTFGAGGYGQLG----- 275

Query: 666 HNCYN 670
           HNC N
Sbjct: 276 HNCTN 280



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 120/228 (52%), Gaps = 24/228 (10%)

Query: 291 ESTVVLDAQ---SIACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVEADVSYPKLIDALN 346
           E  V LDAQ   +++CG  H + +  +GQ+FSWG GS G+LG +  E  V  P+ I  L+
Sbjct: 76  EHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIKCLS 135

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
              I  VACG +H+ A++  G +++WG +    LGL    S IS   P+ +   ++G+  
Sbjct: 136 DVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIS--TPQIIQS-LQGIPF 192

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
           + +  G  H+ AIT +G +F +G   FG LG  D      P  +++L+  + +  SCG  
Sbjct: 193 AQLSAGGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGED 252

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG----DAEPRVV 509
           HTAA+ ++ G            +FT+G G  GQLGH     +  PR V
Sbjct: 253 HTAALTKLRG------------VFTFGAGGYGQLGHNCTNHEINPRKV 288



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 70/212 (33%), Positives = 106/212 (50%), Gaps = 13/212 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG G  NG LG  +N  E          +P+ ++    +    +ACG  H+  ++
Sbjct: 103 GQVFSWGLG-SNGQLG--LNNFE------ECVRVPRNIKCLSDVQIAQVACGYWHSHALS 153

Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           K GQ+FSWG+   G+LG G+  + +S P++I +L G     ++ G  H+ A+TLSG ++ 
Sbjct: 154 KGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFG 213

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   +  G LG       W P  +   +   ++  + CG  HTAA+T    +FTFG G 
Sbjct: 214 WGK--NKFGQLGLNDTKDRWFPALLKS-LRSQRVIFVSCGEDHTAALTKLRGVFTFGAGG 270

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCG 463
           +G LGH   +    PR+V  L        SCG
Sbjct: 271 YGQLGHNCTNHEINPRKVFELMGNVVTQISCG 302


>gi|395855000|ref|XP_003799962.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Otolemur
           garnettii]
          Length = 816

 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 165/342 (48%), Gaps = 35/342 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H+ +VT   +++ +G  + G+LG G +A V+ P  I AL    +   ACG  HT
Sbjct: 40  LSCGDEHSAIVTGNNKLYMFGSNNWGQLGLGSKAAVNKPTCIKALKPEKVKFAACGRTHT 99

Query: 361 CAVTLSGDLY-TWGDGIHNLGLLGQVSE--ISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
              T  G++Y T G+    LG LG   E    H I    S      +I  +  G   +AA
Sbjct: 100 IISTEGGNVYATGGNNEGQLG-LGDTDERDTFHLISFFTSQH----KIKQLSAGSNTSAA 154

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +T  G+LF +GD + G +G  D ++  VP +V   K +  +  SCG +H +A V + G  
Sbjct: 155 LTEDGQLFMWGDNSEGQIGLKDVTNVCVPHQVTIGKPISWI--SCGYYH-SAFVTIDG-- 209

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                    +L+T+G+   G+LG         R+  L   + D +   +VACG   T+ L
Sbjct: 210 ---------ELYTFGESESGKLGLPSQLLTNHRIPQLVSSIPDKV--IQVACGGGHTLVL 258

Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPT---RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
           T    V++ G   +GQLG    T  F T   ++   +K   I  I+CG  H A+++    
Sbjct: 259 TEE-SVYAFGLGQFGQLGL--GTFIFETSEPKVLEYVKGEKIISISCGENHTAMITDTGG 315

Query: 592 VYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
           +YT+G G +G+LG G  +  N+  PT         V+ V CG
Sbjct: 316 IYTFGDGRHGKLGLGLENFTNRFFPTPCSVFLKFMVQLVACG 357



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 121/247 (48%), Gaps = 26/247 (10%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + ++ GS  +  +T+ GQ+F WG+ S G++G     +V  P  +    G  I  ++CG +
Sbjct: 143 KQLSAGSNTSAALTEDGQLFMWGDNSEGQIGLKDVTNVCVPHQVTI--GKPISWISCGYY 200

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEI--SHWIPRKVSGQMEGLQISSICCGPWHTA 416
           H+  VT+ G+LYT+G+     G LG  S++  +H IP+ VS   +  ++  + CG  HT 
Sbjct: 201 HSAFVTIDGELYTFGES--ESGKLGLPSQLLTNHRIPQLVSSIPD--KVIQVACGGGHTL 256

Query: 417 AITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            +T    ++ FG G FG LG G     TS P+ +E +K  K +  SCG  HTA I +  G
Sbjct: 257 VLTEE-SVYAFGLGQFGQLGLGTFIFETSEPKVLEYVKGEKIISISCGENHTAMITDTGG 315

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHG--DAEPRVVPLCVKVSDDISFCKVACG--HSIT 531
                       ++T+GDG  G+LG G  +   R  P    V        VACG  H + 
Sbjct: 316 ------------IYTFGDGRHGKLGLGLENFTNRFFPTPCSVFLKFMVQLVACGGCHMLV 363

Query: 532 IALTATG 538
            A    G
Sbjct: 364 FATPQAG 370



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 6/124 (4%)

Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIED 575
           D   C ++CG   +  +T   +++  GS ++GQLG  S  +  K PT I+  +K   ++ 
Sbjct: 35  DTPIC-LSCGDEHSAIVTGNNKLYMFGSNNWGQLGLGSKAAVNK-PTCIKA-LKPEKVKF 91

Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDK-QVKSVVCGSNF 634
            ACG  H  + +    VY  G    GQLG GD + + T  L+     + ++K +  GSN 
Sbjct: 92  AACGRTHTIISTEGGNVYATGGNNEGQLGLGDTDERDTFHLISFFTSQHKIKQLSAGSNT 151

Query: 635 TAAI 638
           +AA+
Sbjct: 152 SAAL 155



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE--ADVSYPKLIDA 344
           PKVLE        SI+CG  H  ++T  G I+++G+G  GKLG G+E   +  +P     
Sbjct: 286 PKVLEYVKGEKIISISCGENHTAMITDTGGIYTFGDGRHGKLGLGLENFTNRFFPTPCSV 345

Query: 345 LNGSNIHMVACGEFH 359
                + +VACG  H
Sbjct: 346 FLKFMVQLVACGGCH 360


>gi|449081281|sp|Q9R0X5.2|RPGR_MOUSE RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
           Short=mRpgr; Flags: Precursor
          Length = 1001

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 167/354 (47%), Gaps = 59/354 (16%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H  +VT   +++ +G  + G+LG G +A +  P  I AL    + + ACG  HT
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99

Query: 361 CAVTLSGDLYTWGDGIHNLGLLG--------QVSEISHWIPRKVSGQMEGLQISSICCGP 412
              T +G +Y  G   +N G LG           +I  + P           I  +  G 
Sbjct: 100 LVSTDTGGVYAAGG--NNEGQLGLGDTDDRDTFHQIVFFTPADT--------IKQLSAGA 149

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
             +AA+T  GKLF +GD + G +G  D+S+  +P EV   K +  +  SCG +H +A V 
Sbjct: 150 NTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYH-SAFVT 206

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-------AEPRVVPLCVKVSDDISFCKVA 525
           + G           +L+T+G+   G+LG  +       +  RV+ +  +V       +VA
Sbjct: 207 MDG-----------ELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERV------IQVA 249

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACG 579
           CG   T+ LT    V++ G   +GQLG     G F      P  IE  IK + I  I+CG
Sbjct: 250 CGGGHTVVLTEK-VVYAFGLGQFGQLG----LGTFLFETSEPKIIE-RIKDQKICHISCG 303

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
             H A+++    +YT+G G +G+LG G  +  N+  PTL        V+ + CG
Sbjct: 304 ENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 357



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 143/297 (48%), Gaps = 33/297 (11%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDALNGSNIHMVACGEFHT 360
           ACG  H ++ T  G +++ G  + G+LG G   D  ++ +++       I  ++ G   +
Sbjct: 93  ACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTS 152

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T  G L+ WGD  ++ G +G   + +  IP +V+    G  IS I CG +H+A +T 
Sbjct: 153 AALTEDGKLFMWGD--NSEGQIGLEDKSNVCIPHEVTV---GKPISWISCGYYHSAFVTM 207

Query: 421 AGKLFTFGDGTFGALGHGDR--SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
            G+L+TFG+   G LG  +    +   P+ V  + E + +  +CG  HT  + E      
Sbjct: 208 DGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTE------ 260

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHG-----DAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
                  K ++ +G G  GQLG G      +EP++    ++   D   C ++CG + T  
Sbjct: 261 -------KVVYAFGLGQFGQLGLGTFLFETSEPKI----IERIKDQKICHISCGENHTAL 309

Query: 534 LTATGQVFSMGSADYGQ--LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
           +T  G +++ G   +G+  LG    T +F   +  N     ++ IACG  H+ V ++
Sbjct: 310 MTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFAT 366



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 20/218 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F+WG+    G +G           D+ +  +P   E TV      I+CG  H+  VT
Sbjct: 159 GKLFMWGDN-SEGQIG---------LEDKSNVCIPH--EVTVGKPISWISCGYYHSAFVT 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
             G+++++GE   GKLG   E  +++  P+ +  +    I  VACG  HT  +T   +  
Sbjct: 207 MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVLT---EKV 262

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +  G+   G LG  + +      K+  +++  +I  I CG  HTA +T  G L+TFGDG
Sbjct: 263 VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDG 322

Query: 431 TFGALGHGDRSSTS--VPREVETLKELKTVMASCGVWH 466
             G LG G  + T+   P            + +CG  H
Sbjct: 323 RHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH 360



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 38/72 (52%)

Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           ++CG  H A+V+  +++Y +G    GQLG G       PT ++AL+ ++VK   CG N T
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99

Query: 636 AAICLHKGVSIA 647
                  GV  A
Sbjct: 100 LVSTDTGGVYAA 111


>gi|47085959|ref|NP_998341.1| protein RCC2 homolog [Danio rerio]
 gi|71152032|sp|Q6NYE2.1|RCC2_DANRE RecName: Full=Protein RCC2 homolog
 gi|42744570|gb|AAH66628.1| Zgc:77115 [Danio rerio]
          Length = 495

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 170/363 (46%), Gaps = 51/363 (14%)

Query: 305 SKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVT 364
           + H++++T +G+++SWG    G+LGHG    +  PKLI+ L    I   ACG  HT A+T
Sbjct: 132 AAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALT 191

Query: 365 LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            +G +YT+G+  + LG LGQ ++    +    + Q  G  I  + CG   +  +   G L
Sbjct: 192 ENGTVYTFGE--NKLGQLGQGNQTDA-VLSPATIQYNGQPIVKVACGAEFSMIVDCKGNL 248

Query: 425 FTFGDGTFGALGHG------------DRSSTSVPREVETLKE---------LKTVMA--- 460
           ++FG   +G LGH             +     +PR V    E         +  V+A   
Sbjct: 249 YSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDV 308

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD--D 518
           +CG  HT  +             S K++F+WG G  G+LGH + +  +VP  VK+ D   
Sbjct: 309 ACGANHTLVLD------------SQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPG 356

Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIAC 578
               ++ CG+  + AL+  G +F  G  +  +      +  +P  ++ ++    I  +AC
Sbjct: 357 RGATQIYCGYQCSFALSEMGGLFFWGVTNTSR-----ESTMYPKAVQ-DLCGWKIRSLAC 410

Query: 579 GSYHIAVVSSKSEVYTWGKGAN-GQLGHGDNENKQTPTL--VEALRDKQVKSVVCGSNFT 635
           G   I V +  S + +WG     G+LG+GDN+ K + T   V+ L     + VV G + +
Sbjct: 411 GKSSIIVAADDSTI-SWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHS 469

Query: 636 AAI 638
             I
Sbjct: 470 LVI 472



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 86/343 (25%), Positives = 139/343 (40%), Gaps = 49/343 (14%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           ++   D +    PK++E        + ACG  H + +T+ G ++++GE   G+LG G + 
Sbjct: 154 QLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQT 213

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE------- 387
           D          NG  I  VACG   +  V   G+LY++  G    G LG  S+       
Sbjct: 214 DAVLSPATIQYNGQPIVKVACGAEFSMIVDCKGNLYSF--GCPEYGQLGHNSDGKFIARA 271

Query: 388 -----ISHWIPRKVS--------GQ---MEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
                    IPR+V+        GQ   +  +    + CG  HT  + S  ++F++G G 
Sbjct: 272 QRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGG 331

Query: 432 FGALGHGDRSSTSVPREVETLK--ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
           +G LGH ++    VPR V+             CG   + A+ E+ G            LF
Sbjct: 332 YGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCSFALSEMGG------------LF 379

Query: 490 TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG-SADY 548
            WG      + +   E  + P  V+         +ACG S +I + A     S G S  +
Sbjct: 380 FWG------VTNTSRESTMYPKAVQDLCGWKIRSLACGKS-SIIVAADDSTISWGPSPTF 432

Query: 549 GQLGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSK 589
           G+LG   +  K  T  +    +   Y E +  G  H  V++ +
Sbjct: 433 GELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVIARQ 475


>gi|18076889|emb|CAC86115.1| retinitis pigmentosa GTPase regulator [Mus musculus]
          Length = 1001

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 167/354 (47%), Gaps = 59/354 (16%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H  +VT   +++ +G  + G+LG G +A +  P  I AL    + + ACG  HT
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99

Query: 361 CAVTLSGDLYTWGDGIHNLGLLG--------QVSEISHWIPRKVSGQMEGLQISSICCGP 412
              T +G +Y  G   +N G LG           +I  + P           I  +  G 
Sbjct: 100 LVSTDTGGVYAAGG--NNEGQLGLGDTDDRDTFHQIVFFTPADT--------IKQLSAGA 149

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
             +AA+T  GKLF +GD + G +G  D+S+  +P EV   K +  +  SCG +H +A V 
Sbjct: 150 NTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYH-SAFVT 206

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLG-------HGDAEPRVVPLCVKVSDDISFCKVA 525
           + G           +L+T+G+   G+LG       +  +  RV+ +  +V       +VA
Sbjct: 207 MDG-----------ELYTFGEPENGKLGLPSELLMNHRSPQRVLGIPERV------IQVA 249

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACG 579
           CG   T+ LT    V++ G   +GQLG     G F      P  IE  IK + I  I+CG
Sbjct: 250 CGGGHTVVLTEK-VVYAFGLGQFGQLG----LGTFLFETSEPKIIE-RIKDQKICHISCG 303

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
             H A+++    +YT+G G +G+LG G  +  N+  PTL        V+ + CG
Sbjct: 304 ENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 357



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 142/297 (47%), Gaps = 33/297 (11%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDALNGSNIHMVACGEFHT 360
           ACG  H ++ T  G +++ G  + G+LG G   D  ++ +++       I  ++ G   +
Sbjct: 93  ACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTS 152

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T  G L+ WGD  ++ G +G   + +  IP +V+    G  IS I CG +H+A +T 
Sbjct: 153 AALTEDGKLFMWGD--NSEGQIGLEDKSNVCIPHEVTV---GKPISWISCGYYHSAFVTM 207

Query: 421 AGKLFTFGDGTFGALGHGDR--SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
            G+L+TFG+   G LG       +   P+ V  + E + +  +CG  HT  + E      
Sbjct: 208 DGELYTFGEPENGKLGLPSELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTE------ 260

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHG-----DAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
                  K ++ +G G  GQLG G      +EP++    ++   D   C ++CG + T  
Sbjct: 261 -------KVVYAFGLGQFGQLGLGTFLFETSEPKI----IERIKDQKICHISCGENHTAL 309

Query: 534 LTATGQVFSMGSADYGQ--LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
           +T  G +++ G   +G+  LG    T +F   +  N     ++ IACG  H+ V ++
Sbjct: 310 MTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFAT 366



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 20/218 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F+WG+    G +G           D+ +  +P   E TV      I+CG  H+  VT
Sbjct: 159 GKLFMWGDN-SEGQIG---------LEDKSNVCIPH--EVTVGKPISWISCGYYHSAFVT 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
             G+++++GE   GKLG   E  +++  P+ +  +    I  VACG  HT  +T   +  
Sbjct: 207 MDGELYTFGEPENGKLGLPSELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVLT---EKV 262

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +  G+   G LG  + +      K+  +++  +I  I CG  HTA +T  G L+TFGDG
Sbjct: 263 VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDG 322

Query: 431 TFGALGHGDRSSTS--VPREVETLKELKTVMASCGVWH 466
             G LG G  + T+   P            + +CG  H
Sbjct: 323 RHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH 360



 Score = 48.5 bits (114), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 38/72 (52%)

Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           ++CG  H A+V+  +++Y +G    GQLG G       PT ++AL+ ++VK   CG N T
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99

Query: 636 AAICLHKGVSIA 647
                  GV  A
Sbjct: 100 LVSTDTGGVYAA 111


>gi|27923092|gb|AAO27483.1| HERC2 [Homo sapiens]
          Length = 409

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 117/226 (51%), Gaps = 14/226 (6%)

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           H+A +T+AG L+T+G G +G LGH D      P+ VE L+  + V  +CG      +   
Sbjct: 6   HSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 65

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
              T          +++WGDG  G+LG G ++   VP+ +     +   KV CG   ++A
Sbjct: 66  DDDT----------VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVA 115

Query: 534 LTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
           LT +G V++ G  DY +LG  GS    + P +++G ++ + +  IA GS H    +   E
Sbjct: 116 LTKSGAVYTWGKGDYHRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGE 173

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           VYTWG    GQLG G     Q P LV AL+ K+V  V CGS  T A
Sbjct: 174 VYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 219



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 131/277 (47%), Gaps = 34/277 (12%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G  H+  VT  G +++WG+G  G+LGH    D   PKL++AL G  +  +ACG     
Sbjct: 1   AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQ 60

Query: 362 AVTLSGD--LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
            + L+ D  +++WGDG  + G LG+       +P K+   + GL +  + CG   + A+T
Sbjct: 61  TLCLTDDDTVWSWGDG--DYGKLGRGGSDGCKVPMKID-SLTGLGVVKVECGSQFSVALT 117

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
            +G ++T+G G +  LGHG       PR+V+ L+  K +  + G  H     E       
Sbjct: 118 KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTE------- 170

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                  +++TWGD  EGQLG G       P  V         +VACG + T+A + +  
Sbjct: 171 -----DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTS-- 223

Query: 540 VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDI 576
                         P S GK P ++   +++ ++++I
Sbjct: 224 -------------KPASAGKLPAQVP--MEYNHLQEI 245



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 111/219 (50%), Gaps = 15/219 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA--VL 310
           GD++ WG+G   G LG          +D  D L PK++E+        IACGS  A  + 
Sbjct: 14  GDLYTWGKGR-YGRLG---------HSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLC 63

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           +T    ++SWG+G  GKLG G       P  ID+L G  +  V CG   + A+T SG +Y
Sbjct: 64  LTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVY 123

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           TWG G ++   LG  S+     PR+V G ++G ++ +I  G  H    T  G+++T+GD 
Sbjct: 124 TWGKGDYH--RLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDN 180

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA 469
             G LG G  ++   PR V  L+  K    +CG  HT A
Sbjct: 181 DEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 219



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 95/192 (49%), Gaps = 21/192 (10%)

Query: 238 SSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLD 297
           S  +Q  C  D D    V+ WG+G    L  G  +G ++          P  ++S   L 
Sbjct: 56  SGDAQTLCLTDDD---TVWSWGDGDYGKLGRGGSDGCKV----------PMKIDSLTGLG 102

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
              + CGS+ +V +TK G +++WG+G   +LGHG +  V  P+ +  L G  +  +A G 
Sbjct: 103 VVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGS 162

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCG-----P 412
            H    T  G++YTWGD  ++ G LG  +  +   PR V+  ++G +++ + CG      
Sbjct: 163 LHCVCCTEDGEVYTWGD--NDEGQLGDGTTNAIQRPRLVAA-LQGKKVNRVACGSAHTLA 219

Query: 413 WHTAAITSAGKL 424
           W T+   SAGKL
Sbjct: 220 WSTSKPASAGKL 231



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 41/64 (64%)

Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTA 636
           A G  H A V++  ++YTWGKG  G+LGH D+E++  P LVEAL+  +V  + CGS    
Sbjct: 1   AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQ 60

Query: 637 AICL 640
            +CL
Sbjct: 61  TLCL 64



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 4/117 (3%)

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--Y 581
           A G + +  +TA G +++ G   YG+LG   S  +  P  +E    HR + DIACGS   
Sbjct: 1   AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDA 59

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               ++    V++WG G  G+LG G ++  + P  +++L    V  V CGS F+ A+
Sbjct: 60  QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 116


>gi|392355475|ref|XP_003752052.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
           norvegicus]
          Length = 608

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 168/351 (47%), Gaps = 53/351 (15%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H  +VT   +++ +G  + G+LG G ++ +S P  I AL    + + ACG  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCIKALKPEKVKLAACGRNHT 137

Query: 361 CAVTLSGDLYTWGDGIHNLGLLG--------QVSEISHWIPRKVSGQMEGLQISSICCGP 412
              T +G +Y  G   +N G LG           +I  + P  +        I  +  G 
Sbjct: 138 LVSTDTGGVYAAGG--NNEGQLGLGDTDDRDTFHQIGFFTPSDI--------IKQLSAGA 187

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
             +AA+T  GKLF +GD + G +G  ++S+  +P EV   K +  +  SCG +H+A +  
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLKNKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT- 244

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-------AEPRVVPLCVKVSDDISFCKVA 525
                      +  +L+T+G+   G+LG  +       +  RV+ +  KV       +VA
Sbjct: 245 -----------TDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKV------IQVA 287

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT---RIEGNIKHRYIEDIACGSYH 582
           CG   T+ LT    V++ G   +GQLG    T  F T   +I   IK + I  I+CG  H
Sbjct: 288 CGGGHTVVLTEK-VVYAFGLGQFGQLGL--GTFLFETSEPKIIDRIKDQKISHISCGENH 344

Query: 583 IAVVSSKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
            A+++    +YT+G G +G+LG G  +  N+  PTL        V+ + CG
Sbjct: 345 TALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACG 395



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 102/218 (46%), Gaps = 20/218 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F+WG+           +  +I   ++ +  +P   E TV      I+CG  H+  VT
Sbjct: 197 GKLFMWGDN----------SEGQIGLKNKSNVCIPH--EVTVGKPISWISCGYYHSAFVT 244

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
             G+++++GE   GKLG   +  +++  P+ +  +    I  VACG  HT  +T   +  
Sbjct: 245 TDGELYTFGEPENGKLGLPNQLLINHRSPQRVLGIPDKVIQ-VACGGGHTVVLT---EKV 300

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +  G+   G LG  + +      K+  +++  +IS I CG  HTA +T  G ++TFGDG
Sbjct: 301 VYAFGLGQFGQLGLGTFLFETSEPKIIDRIKDQKISHISCGENHTALMTDIGLMYTFGDG 360

Query: 431 TFGALGHGDRSSTS--VPREVETLKELKTVMASCGVWH 466
             G LG G  + T+   P       +    + +CG  H
Sbjct: 361 RHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGCH 398



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 14/145 (9%)

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG G  GQ    +   RV P        I F         ++ +  TG VF+ G   + +
Sbjct: 7   WGTGGLGQYLRPN---RVAPAVFPKQAQIPFAAFGMAEPESL-VPDTGAVFTFGKTKFAE 62

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
                     P++     K+     ++CG  H A+V+  +++Y +G    GQLG G    
Sbjct: 63  --------NIPSKFW--FKNDVPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSA 112

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFT 635
              PT ++AL+ ++VK   CG N T
Sbjct: 113 ISKPTCIKALKPEKVKLAACGRNHT 137


>gi|5824124|emb|CAB54041.1| RPGR protein [Mus musculus]
          Length = 1001

 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 167/354 (47%), Gaps = 59/354 (16%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H  +VT   +++ +G  + G+LG G +A +  P  I AL    + + ACG  HT
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99

Query: 361 CAVTLSGDLYTWGDGIHNLGLLG--------QVSEISHWIPRKVSGQMEGLQISSICCGP 412
              T +G +Y  G   +N G LG           +I  + P           I  +  G 
Sbjct: 100 LVSTDTGGVYAAGG--NNEGQLGLGDTDDRDTFHQIVFFTPADT--------IKQLSAGA 149

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
             +AA+T  GKLF +GD + G +G  D+S+  +P EV   K +  +  SCG +H +A V 
Sbjct: 150 NTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYH-SAFVT 206

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-------AEPRVVPLCVKVSDDISFCKVA 525
           + G           +L+T+G+   G+LG  +       +  RV+ +  +V       +VA
Sbjct: 207 MDG-----------ELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERV------IQVA 249

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACG 579
           CG   T+ LT    V++ G   +GQLG     G F      P  IE  IK + I  I+CG
Sbjct: 250 CGGGHTVVLTEK-VVYAFGLGQFGQLG----LGTFLFETSEPKIIE-RIKDQKICHISCG 303

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
             H A+++    +YT+G G +G+LG G  +  N+  PTL        V+ + CG
Sbjct: 304 ENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 357



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 143/297 (48%), Gaps = 33/297 (11%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDALNGSNIHMVACGEFHT 360
           ACG  H ++ T  G +++ G  + G+LG G   D  ++ +++       I  ++ G   +
Sbjct: 93  ACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTS 152

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T  G L+ WGD  ++ G +G   + +  IP +V+    G  IS I CG +H+A +T 
Sbjct: 153 AALTEDGKLFMWGD--NSEGQIGLEDKSNVCIPHEVTV---GKPISWISCGYYHSAFVTM 207

Query: 421 AGKLFTFGDGTFGALGHGDR--SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
            G+L+TFG+   G LG  +    +   P+ V  + E + +  +CG  HT  + E      
Sbjct: 208 DGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTE------ 260

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHG-----DAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
                  K ++ +G G  GQLG G      +EP++    ++   D   C ++CG + T  
Sbjct: 261 -------KVVYAFGLGQFGQLGLGTFLFETSEPKI----IERIKDQKICHISCGENHTAL 309

Query: 534 LTATGQVFSMGSADYGQ--LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
           +T  G +++ G   +G+  LG    T +F   +  N     ++ IACG  H+ V ++
Sbjct: 310 MTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFAT 366



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 20/218 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F+WG+    G +G           D+ +  +P   E TV      I+CG  H+  VT
Sbjct: 159 GKLFMWGDN-SEGQIG---------LEDKSNVCIPH--EVTVGKPISWISCGYYHSAFVT 206

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
             G+++++GE   GKLG   E  +++  P+ +  +    I  VACG  HT  +T   +  
Sbjct: 207 MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVLT---EKV 262

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +  G+   G LG  + +      K+  +++  +I  I CG  HTA +T  G L+TFGDG
Sbjct: 263 VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDG 322

Query: 431 TFGALGHGDRSSTS--VPREVETLKELKTVMASCGVWH 466
             G LG G  + T+   P            + +CG  H
Sbjct: 323 RHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH 360



 Score = 48.5 bits (114), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 38/72 (52%)

Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           ++CG  H A+V+  +++Y +G    GQLG G       PT ++AL+ ++VK   CG N T
Sbjct: 40  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99

Query: 636 AAICLHKGVSIA 647
                  GV  A
Sbjct: 100 LVSTDTGGVYAA 111


>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
          Length = 992

 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 167/344 (48%), Gaps = 34/344 (9%)

Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAV 363
           G  H++L+   G + S G+ S G+LG         P+ I AL   ++ +V+CG+ H+ AV
Sbjct: 3   GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAV 62

Query: 364 TLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGK 423
              G ++ WG        +G++ E + +IP+K+   +  ++I  + CG +H+ A++  G+
Sbjct: 63  CHKGRVFAWGAASEGQLGIGELKETT-FIPKKIK-TLADIKIIQVACGHYHSLALSEDGQ 120

Query: 424 LFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           +F++G  + G LG G +  S + P+ V +L+ +     + G  H+ A+       SG++ 
Sbjct: 121 VFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-----SLSGTS- 174

Query: 483 LSSKKLFTWGDGAEGQLG-HGDAEP--RVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                 F WG    GQL   G+  P  R  P+ V     +S   ++CG+  T  LT  G+
Sbjct: 175 ------FGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVLTQDGK 228

Query: 540 VFSMGSADYGQLGSPGSTGK----FPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
           VF+ G   YGQLG   +  K       RIEG      +  I CGSYH +A V +  +V +
Sbjct: 229 VFTFGDNSYGQLGHDSTAEKRGPQLVERIEG-----LVSQIDCGSYHTLAYVYTTGQVVS 283

Query: 595 WGKGA----NGQLGHGDNENKQTPTLVEA--LRDKQVKSVVCGS 632
           +G+G     +        E+     L+ A  L D QVK +  G+
Sbjct: 284 FGRGPGCTRSSPHPEALAESSDVSCLISANDLEDVQVKHIFAGT 327



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 132/262 (50%), Gaps = 26/262 (9%)

Query: 222 RSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWG---EG-LGNGLLGGAVNGVEIS 277
           R    ++  ++L S     S   CH+     G VF WG   EG LG G L          
Sbjct: 40  RIPALETLHVALVSCGKEHSLAVCHK-----GRVFAWGAASEGQLGIGEL---------- 84

Query: 278 SADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADV 336
              +    +PK +++   +    +ACG  H++ +++ GQ+FSWG+ S G+LG G E    
Sbjct: 85  ---KETTFIPKKIKTLADIKIIQVACGHYHSLALSEDGQVFSWGKNSHGQLGLGKEFPSQ 141

Query: 337 SYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRK 395
           + P+ + +L G  +  VA G  H+ A++LSG  + WG +    L L G  + +  + P  
Sbjct: 142 ASPQRVRSLEGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVL 201

Query: 396 VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL 455
           V G ++ L +  I CG  HTA +T  GK+FTFGD ++G LGH   +    P+ VE ++ L
Sbjct: 202 V-GALKTLSVVFISCGYEHTAVLTQDGKVFTFGDNSYGQLGHDSTAEKRGPQLVERIEGL 260

Query: 456 KTVMASCGVWHTAAIVEVAGKT 477
            + +  CG +HT A V   G+ 
Sbjct: 261 VSQI-DCGSYHTLAYVYTTGQV 281



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 133/265 (50%), Gaps = 24/265 (9%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDAL 345
           P+ + +   L    ++CG +H++ V  +G++F+WG  S G+LG G   + ++ PK I  L
Sbjct: 38  PERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGELKETTFIPKKIKTL 97

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGLQ 404
               I  VACG +H+ A++  G +++WG   H  G LG   E  S   P++V   +EG+ 
Sbjct: 98  ADIKIIQVACGHYHSLALSEDGQVFSWGKNSH--GQLGLGKEFPSQASPQRVRS-LEGIP 154

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGAL---GHGDRSSTSVPREVETLKELKTVMAS 461
           ++ +  G  H+ A++ +G  F +G    G L   G+        P  V  LK L  V  S
Sbjct: 155 LAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFIS 214

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDIS 520
           CG  HTA + +              K+FT+GD + GQLGH   AE R   L  ++   +S
Sbjct: 215 CGYEHTAVLTQ------------DGKVFTFGDNSYGQLGHDSTAEKRGPQLVERIEGLVS 262

Query: 521 FCKVACGHSITIA-LTATGQVFSMG 544
             ++ CG   T+A +  TGQV S G
Sbjct: 263 --QIDCGSYHTLAYVYTTGQVVSFG 285



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 106/238 (44%), Gaps = 27/238 (11%)

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
           G  H+  + S G + + GD + G LG         P  +  L+ L   + SCG  H+ A+
Sbjct: 3   GEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSLAV 62

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA-EPRVVPLCVKVSDDISFCKVACGHS 529
                           ++F WG  +EGQLG G+  E   +P  +K   DI   +VACGH 
Sbjct: 63  CH------------KGRVFAWGAASEGQLGIGELKETTFIPKKIKTLADIKIIQVACGHY 110

Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDI-----ACGSYHI 583
            ++AL+  GQVFS G   +GQLG     GK FP++     + R +E I     A G  H 
Sbjct: 111 HSLALSEDGQVFSWGKNSHGQLG----LGKEFPSQASPQ-RVRSLEGIPLAQVAAGGAHS 165

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNE---NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             +S     + WG    GQL    N     +  P LV AL+   V  + CG   TA +
Sbjct: 166 FALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVL 223


>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 6906

 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 140/290 (48%), Gaps = 20/290 (6%)

Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLGH-GVEADVSYPKLIDALNGSNIHMVACGEFHTCA 362
           G +H + +T  G  +SWG    G+LGH  V   +  PKLI+++    +   A    H+  
Sbjct: 444 GCEHLIAITDTGLAYSWGYNDRGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHSAL 503

Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
           V++SG+LYT+G  +++ G LG +    H    ++   + G  +S + CG +H    T +G
Sbjct: 504 VSVSGELYTFG--MNDCGQLG-LDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISG 560

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           ++FT G    G LG G      VP +V    EL   +A CG +H  AI         S G
Sbjct: 561 EVFTCGKNDHGQLGLGHNKQVKVPTQVVLPNELVCFVA-CGYYHATAIT--------STG 611

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
           L+    +++G    GQLG G    + +P+ + +S +      ACG   T+ ++ +GQVF 
Sbjct: 612 LT----YSFGRNDYGQLGIGSKIHQNIPIALTISSNTRMVHAACGCYHTLLMSDSGQVFV 667

Query: 543 MGSADYGQLGSPGSTGKF---PTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
            G  + GQLG+ G+T      P ++      R    IA G Y  +++  +
Sbjct: 668 FGRNNKGQLGNRGNTDSLLPVPLKVRPEKNMRRCLHIAAGFYTTSLIVER 717



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 156/332 (46%), Gaps = 20/332 (6%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVAC-- 355
           + +  G++   ++T  G + + G    G+ GHG  +  V   + I AL    +  +    
Sbjct: 384 RQVVSGNEILAILTSDGVVLTCGLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASN 443

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
           G  H  A+T +G  Y+WG   ++ G LG  +  +     K+   ++  ++ S      H+
Sbjct: 444 GCEHLIAITDTGLAYSWG--YNDRGQLGHENVGTKLYLPKLIESIKEKKMKSAAVSYHHS 501

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A ++ +G+L+TFG    G LG       S P+ V+ L      M SCG++H   +  ++G
Sbjct: 502 ALVSVSGELYTFGMNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMV-LCTISG 560

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
           +           +FT G    GQLG G  +   VP  V + +++  C VACG+    A+T
Sbjct: 561 E-----------VFTCGKNDHGQLGLGHNKQVKVPTQVVLPNEL-VCFVACGYYHATAIT 608

Query: 536 ATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
           +TG  +S G  DYGQLG      +  P  +  +   R +   ACG YH  ++S   +V+ 
Sbjct: 609 STGLTYSFGRNDYGQLGIGSKIHQNIPIALTISSNTRMVH-AACGCYHTLLMSDSGQVFV 667

Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVK 626
           +G+   GQLG+  N +   P  ++   +K ++
Sbjct: 668 FGRNNKGQLGNRGNTDSLLPVPLKVRPEKNMR 699



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 149/324 (45%), Gaps = 37/324 (11%)

Query: 299  QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVAC-- 355
            QSIA G++  V++ K G +F+ G    G+ G G  +  +  P  I AL+G  I MVA   
Sbjct: 3169 QSIAGGNEVLVVLMKDGAVFTCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAASN 3228

Query: 356  GEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
            G  H  A++  G +Y+WG +    LGL   VS+ SH  PR +    E   I+       H
Sbjct: 3229 GCEHMLAISHDGAVYSWGYNDRGQLGLGTTVSK-SH-TPRVIESLREKYFITFAAVSYHH 3286

Query: 415  TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            +A +++ G L TFG    G LG         P+ VETL   K    +CG++HT AIV+  
Sbjct: 3287 SAVVSNNGDLLTFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVD-- 3344

Query: 475  GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS--------DDIS-FCKVA 525
                         ++++G    GQLG    +   VP+ VK+         D ++   +V 
Sbjct: 3345 ----------DGDVYSFGKNEYGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVY 3394

Query: 526  CGHSITIALTATGQVFSMGSADYGQLG----SPGSTGKF-PTRIEGNIKHRYIEDIACGS 580
            CG+  T+ +   G+V + G  DYGQLG       S  +F P  +   +K       +CG 
Sbjct: 3395 CGYYHTVTILECGKVVTWGRNDYGQLGIGSKEHKSIAQFVPLPLTSRVKRA-----SCGC 3449

Query: 581  YHIAVVSSKSEVYTWGKGANGQLG 604
            YH  ++        +G+   GQLG
Sbjct: 3450 YHTLLLLVNGRPMVFGRNNKGQLG 3473



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 117/230 (50%), Gaps = 16/230 (6%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
           LPK++ES      +S A    H+ LV+  G+++++G    G+LG       S P+L+ AL
Sbjct: 479 LPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHTQHQSTPQLVKAL 538

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
            G ++ MV+CG +H    T+SG+++T G   H    LG   ++   +P +V    E   +
Sbjct: 539 LGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNKQVK--VPTQVVLPNE--LV 594

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
             + CG +H  AITS G  ++FG   +G LG G +   ++P  +      + V A+CG +
Sbjct: 595 CFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSKIHQNIPIALTISSNTRMVHAACGCY 654

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
           HT  + +            S ++F +G   +GQLG+      ++P+ +KV
Sbjct: 655 HTLLMSD------------SGQVFVFGRNNKGQLGNRGNTDSLLPVPLKV 692



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 150/353 (42%), Gaps = 49/353 (13%)

Query: 313  KQGQIFSWGEGSGGKL--GHGVEAD-------VSYPKLIDALNGSNIHMVAC---GEFHT 360
            ++ +IFS G+ + G+L  GH    +        SY K I ++ G N  +V     G   T
Sbjct: 3131 EECEIFSCGQNNYGELCLGHCNPTNKLERASFFSY-KSIQSIAGGNEVLVVLMKDGAVFT 3189

Query: 361  CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC--GPWHTAAI 418
            C +  SG     G G  +  L+         +P  +   + G+ I+ +    G  H  AI
Sbjct: 3190 CGLNKSGQC---GIGNFDERLI---------VPSPIPA-LSGIPITMVAASNGCEHMLAI 3236

Query: 419  TSAGKLFTFGDGTFGALGHGDRSSTS-VPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
            +  G ++++G    G LG G   S S  PR +E+L+E   +  +   +H +A+V      
Sbjct: 3237 SHDGAVYSWGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVV------ 3290

Query: 478  SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
              +NG     L T+G    GQLG    + +  P  V+        +VACG   T+A+   
Sbjct: 3291 -SNNG----DLLTFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDD 3345

Query: 538  GQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRY--------IEDIACGSYHIAVVSS 588
            G V+S G  +YGQLG S     K P  ++     R            + CG YH   +  
Sbjct: 3346 GDVYSFGKNEYGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILE 3405

Query: 589  KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
              +V TWG+   GQLG G  E+K     V      +VK   CG   T  + ++
Sbjct: 3406 CGKVVTWGRNDYGQLGIGSKEHKSIAQFVPLPLTSRVKRASCGCYHTLLLLVN 3458



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 147/327 (44%), Gaps = 24/327 (7%)

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG- 373
           G+++S G+ S G+LG G + +      +      +I  V  G      +T  G + T G 
Sbjct: 348 GELYSCGQNSYGELGLGDDIERHQLTSVPLCGWDHIRQVVSGNEILAILTSDGVVLTCGL 407

Query: 374 --DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
              G    G   +   +   I    S +++ +  S+ C    H  AIT  G  +++G   
Sbjct: 408 NKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGC---EHLIAITDTGLAYSWGYND 464

Query: 432 FGALGHGDR-SSTSVPREVETLKELKTVMASCGV-WHTAAIVEVAGKTSGSNGLSSKKLF 489
            G LGH +  +   +P+ +E++KE K  M S  V +H +A+V V+G+           L+
Sbjct: 465 RGQLGHENVGTKLYLPKLIESIKEKK--MKSAAVSYHHSALVSVSGE-----------LY 511

Query: 490 TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
           T+G    GQLG    + +  P  VK         V+CG    +  T +G+VF+ G  D+G
Sbjct: 512 TFGMNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCGLYHMVLCTISGEVFTCGKNDHG 571

Query: 550 QLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           QLG       K PT++   + +  +  +ACG YH   ++S    Y++G+   GQLG G  
Sbjct: 572 QLGLGHNKQVKVPTQVV--LPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSK 629

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFT 635
            ++  P  +    + ++    CG   T
Sbjct: 630 IHQNIPIALTISSNTRMVHAACGCYHT 656



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 17/239 (7%)

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGD-RSSTSVPREVETLK--ELKTVMA 460
            I  +  G    A +TS G + T G    G  GHG+      + R ++ L+   +K + A
Sbjct: 382 HIRQVVSGNEILAILTSDGVVLTCGLNKSGQCGHGNFDERVMLLRPIQALRSHRVKYINA 441

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDI 519
           S G  H  AI +         GL+    ++WG    GQLGH +   ++ +P  ++   + 
Sbjct: 442 SNGCEHLIAITD--------TGLA----YSWGYNDRGQLGHENVGTKLYLPKLIESIKEK 489

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
                A  +  +  ++ +G++++ G  D GQLG   +  +   ++   +   ++  ++CG
Sbjct: 490 KMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHTQHQSTPQLVKALLGHHVSMVSCG 549

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            YH+ + +   EV+T GK  +GQLG G N+  + PT V  L ++ V  V CG     AI
Sbjct: 550 LYHMVLCTISGEVFTCGKNDHGQLGLGHNKQVKVPTQV-VLPNELVCFVACGYYHATAI 607



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 114/257 (44%), Gaps = 32/257 (12%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGS-KHAVLV 311
            G V+ WG     G LG    G  +S +       P+V+ES       + A  S  H+ +V
Sbjct: 3240 GAVYSWGYN-DRGQLGL---GTTVSKSHT-----PRVIESLREKYFITFAAVSYHHSAVV 3290

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
            +  G + ++G    G+LG         P+L++ L+   +  VACG +HT A+   GD+Y+
Sbjct: 3291 SNNGDLLTFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACGLYHTVAIVDDGDVYS 3350

Query: 372  WGDGIHNLGLLG-------QVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGK 423
            +G   +  G LG       +V  +    P   +  ++ + +   + CG +HT  I   GK
Sbjct: 3351 FGK--NEYGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGK 3408

Query: 424  LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
            + T+G   +G LG G +   S+ + V      +   ASCG +HT  +            L
Sbjct: 3409 VVTWGRNDYGQLGIGSKEHKSIAQFVPLPLTSRVKRASCGCYHTLLL------------L 3456

Query: 484  SSKKLFTWGDGAEGQLG 500
             + +   +G   +GQLG
Sbjct: 3457 VNGRPMVFGRNNKGQLG 3473


>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 371

 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 127/245 (51%), Gaps = 17/245 (6%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQ-IFSWGEGSGGKLGHGVE 333
           ++   D  D LLP  L +    D  S+ CG+ + V  +K G+ ++SWG G  G+LGHG  
Sbjct: 135 QLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDP 194

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +D+  P  I AL G  I  ++CG+ H  AVT+   + +WG   +    LG   + SH +P
Sbjct: 195 SDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKD-SH-VP 252

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           +K+    EG++I  +  G  H+ AIT  G L+ +G G +G LG GD +   +P +V    
Sbjct: 253 QKILA-FEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDG 311

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
           + K VM SCG  HT +I             SS  L+T G    GQLGHGD E  +VP  V
Sbjct: 312 D-KIVMVSCGWRHTISIS------------SSGGLYTHGWSKYGQLGHGDFEDCLVPRKV 358

Query: 514 KVSDD 518
           +   D
Sbjct: 359 QALSD 363



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 121/237 (51%), Gaps = 17/237 (7%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG-DLYTWGDG 375
           + SWG G  G+LGHG   D   P  + A +G +I  V CG  +T A + SG D+Y+WG G
Sbjct: 125 VCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWG 184

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
             + G LG       +IP  +   ++GL+I  I CG  H  A+T   K+ ++G    G L
Sbjct: 185 --DFGRLGHGDPSDLFIPHPIRA-LQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGEL 241

Query: 436 GHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGA 495
           G G    + VP+++   + ++  M + G  H+ AI E               L+ WG G 
Sbjct: 242 GLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITE------------DGDLYGWGWGR 289

Query: 496 EGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            G LG GD   R++P  V +  D     V+CG   TI+++++G +++ G + YGQLG
Sbjct: 290 YGNLGLGDTNDRLIPEKVNIDGD-KIVMVSCGWRHTISISSSGGLYTHGWSKYGQLG 345



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 132/275 (48%), Gaps = 20/275 (7%)

Query: 358 FHTCAVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
           F++    +SG++  +WG G    G LG        +P K+S   +G  I S+ CG  +T 
Sbjct: 113 FNSIQNQVSGNVVCSWGRG--EDGQLGHGDTDDRLLPTKLSA-FDGQDIVSVTCGADYTV 169

Query: 417 AITSAGK-LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
           A + +GK ++++G G FG LGHGD S   +P  +  L+ L+    SCG  H  A+     
Sbjct: 170 ARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVT---- 225

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
                      K+ +WG    G+LG G  +   VP  +   + I    VA G   ++A+T
Sbjct: 226 --------MENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAIT 277

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
             G ++  G   YG LG   +  +  P ++  NI    I  ++CG  H   +SS   +YT
Sbjct: 278 EDGDLYGWGWGRYGNLGLGDTNDRLIPEKV--NIDGDKIVMVSCGWRHTISISSSGGLYT 335

Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVV 629
            G    GQLGHGD E+   P  V+AL DK +  V+
Sbjct: 336 HGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQVI 370



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/206 (37%), Positives = 108/206 (52%), Gaps = 24/206 (11%)

Query: 254 DVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAV 309
           DV+ WG G    LG+G              D  D  +P  + +   L  + I+CG  H +
Sbjct: 177 DVYSWGWGDFGRLGHG--------------DPSDLFIPHPIRALQGLRIKQISCGDCHCL 222

Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
            VT + ++ SWG    G+LG G   D   P+ I A  G  I MVA G  H+ A+T  GDL
Sbjct: 223 AVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDL 282

Query: 370 YTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           Y WG G + NLG LG  ++    IP KV+  ++G +I  + CG  HT +I+S+G L+T G
Sbjct: 283 YGWGWGRYGNLG-LGDTND--RLIPEKVN--IDGDKIVMVSCGWRHTISISSSGGLYTHG 337

Query: 429 DGTFGALGHGDRSSTSVPREVETLKE 454
              +G LGHGD     VPR+V+ L +
Sbjct: 338 WSKYGQLGHGDFEDCLVPRKVQALSD 363



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 1/159 (0%)

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ- 539
           N +S   + +WG G +GQLGHGD + R++P  +   D      V CG   T+A + +G+ 
Sbjct: 118 NQVSGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKD 177

Query: 540 VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
           V+S G  D+G+LG    +  F       ++   I+ I+CG  H   V+ +++V +WG+  
Sbjct: 178 VYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQ 237

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           NG+LG G  ++   P  + A    ++K V  G+  + AI
Sbjct: 238 NGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAI 276



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 10/121 (8%)

Query: 540 VFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS-YHIAVVSSKSEVYTWGK 597
           V S G  + GQLG   +  +  PT++      + I  + CG+ Y +A   S  +VY+WG 
Sbjct: 125 VCSWGRGEDGQLGHGDTDDRLLPTKLSA-FDGQDIVSVTCGADYTVARSKSGKDVYSWGW 183

Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRN 657
           G  G+LGHGD  +   P  + AL+  ++K + CG     A+ +       ++ + S  RN
Sbjct: 184 GDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTM-------ENKVLSWGRN 236

Query: 658 Q 658
           Q
Sbjct: 237 Q 237



 Score = 40.0 bits (92), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 19/105 (18%)

Query: 253 GDVFIWGEG-LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI---ACGSKHA 308
           GD++ WG G  GN  LG           D  D L+P+     V +D   I   +CG +H 
Sbjct: 280 GDLYGWGWGRYGNLGLG-----------DTNDRLIPE----KVNIDGDKIVMVSCGWRHT 324

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMV 353
           + ++  G +++ G    G+LGHG   D   P+ + AL+   I  V
Sbjct: 325 ISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQV 369


>gi|295789055|ref|NP_001171421.1| X-linked retinitis pigmentosa GTPase regulator isoform 1 [Mus
           musculus]
          Length = 1039

 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 167/354 (47%), Gaps = 59/354 (16%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H  +VT   +++ +G  + G+LG G +A +  P  I AL    + + ACG  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137

Query: 361 CAVTLSGDLYTWGDGIHNLGLLG--------QVSEISHWIPRKVSGQMEGLQISSICCGP 412
              T +G +Y  G   +N G LG           +I  + P           I  +  G 
Sbjct: 138 LVSTDTGGVYAAGG--NNEGQLGLGDTDDRDTFHQIVFFTPADT--------IKQLSAGA 187

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
             +AA+T  GKLF +GD + G +G  D+S+  +P EV   K +  +  SCG +H +A V 
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYH-SAFVT 244

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-------AEPRVVPLCVKVSDDISFCKVA 525
           + G           +L+T+G+   G+LG  +       +  RV+ +  +V       +VA
Sbjct: 245 MDG-----------ELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERV------IQVA 287

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACG 579
           CG   T+ LT    V++ G   +GQLG     G F      P  IE  IK + I  I+CG
Sbjct: 288 CGGGHTVVLTEK-VVYAFGLGQFGQLG----LGTFLFETSEPKIIE-RIKDQKICHISCG 341

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
             H A+++    +YT+G G +G+LG G  +  N+  PTL        V+ + CG
Sbjct: 342 ENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 143/297 (48%), Gaps = 33/297 (11%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDALNGSNIHMVACGEFHT 360
           ACG  H ++ T  G +++ G  + G+LG G   D  ++ +++       I  ++ G   +
Sbjct: 131 ACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTS 190

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T  G L+ WGD  ++ G +G   + +  IP +V+    G  IS I CG +H+A +T 
Sbjct: 191 AALTEDGKLFMWGD--NSEGQIGLEDKSNVCIPHEVTV---GKPISWISCGYYHSAFVTM 245

Query: 421 AGKLFTFGDGTFGALGHGDR--SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
            G+L+TFG+   G LG  +    +   P+ V  + E + +  +CG  HT  + E      
Sbjct: 246 DGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTE------ 298

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHG-----DAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
                  K ++ +G G  GQLG G      +EP++    ++   D   C ++CG + T  
Sbjct: 299 -------KVVYAFGLGQFGQLGLGTFLFETSEPKI----IERIKDQKICHISCGENHTAL 347

Query: 534 LTATGQVFSMGSADYGQ--LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
           +T  G +++ G   +G+  LG    T +F   +  N     ++ IACG  H+ V ++
Sbjct: 348 MTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFAT 404



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 35/264 (13%)

Query: 215 GLDDANSRSS--------TADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGL 266
           GL D + R +         AD+ +  LS+  ++S+  +  ED    G +F+WG+    G 
Sbjct: 158 GLGDTDDRDTFHQIVFFTPADTIK-QLSAGANTSA--ALTED----GKLFMWGDN-SEGQ 209

Query: 267 LGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGG 326
           +G           D+ +  +P   E TV      I+CG  H+  VT  G+++++GE   G
Sbjct: 210 IG---------LEDKSNVCIPH--EVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENG 258

Query: 327 KLGHGVEADVSY--PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQ 384
           KLG   E  +++  P+ +  +    I  VACG  HT  +T   +   +  G+   G LG 
Sbjct: 259 KLGLPNELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVLT---EKVVYAFGLGQFGQLGL 314

Query: 385 VSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS 444
            + +      K+  +++  +I  I CG  HTA +T  G L+TFGDG  G LG G  + T+
Sbjct: 315 GTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTN 374

Query: 445 --VPREVETLKELKTVMASCGVWH 466
              P            + +CG  H
Sbjct: 375 QFFPTLCSNFLRFAVQLIACGGCH 398



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 11/141 (7%)

Query: 507 RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEG 566
           RV P        I F       S ++ +  TG VF+ G   + +          P++   
Sbjct: 20  RVAPAIFPKQAQIPFAGFGMAESESL-VPDTGAVFTFGKTKFAE--------NIPSKFW- 69

Query: 567 NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVK 626
             K+     ++CG  H A+V+  +++Y +G    GQLG G       PT ++AL+ ++VK
Sbjct: 70  -FKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVK 128

Query: 627 SVVCGSNFTAAICLHKGVSIA 647
              CG N T       GV  A
Sbjct: 129 LAACGRNHTLVSTDTGGVYAA 149


>gi|21619468|gb|AAH31624.1| RPGR protein [Homo sapiens]
 gi|119579847|gb|EAW59443.1| retinitis pigmentosa GTPase regulator, isoform CRA_c [Homo sapiens]
 gi|325464495|gb|ADZ16018.1| retinitis pigmentosa GTPase regulator [synthetic construct]
          Length = 480

 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 175/358 (48%), Gaps = 38/358 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H+ +VT   +++ +G  + G+LG G ++ +S P  + AL    + + ACG  HT
Sbjct: 40  LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99

Query: 361 CAVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
              T  G++Y T G+    LG LG   E + +    +S      +I  +  G   +AA+T
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG-LGDTEERNTF--HVISFFTSEHKIKQLSAGSNTSAALT 156

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G+LF +GD + G +G  + S+  VP++V   K +  +  SCG +H+A +         
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVT-------- 206

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
               +  +L+ +G+   G+LG  +      R   L  ++ + +   +VACG   T+ LT 
Sbjct: 207 ----TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV--IQVACGGEHTVVLTE 260

Query: 537 TGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
              V++ G   +GQLG     G F      P  IE NI+ + I  I+CG  H A+++   
Sbjct: 261 NA-VYTFGLGQFGQLG----LGTFLFETSEPKVIE-NIRDQTISYISCGENHTALITDIG 314

Query: 591 EVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCGS-NFTAAICLHKGVS 645
            +YT+G G +G+LG G  +  N   PTL        VK V CG  +       H+GV+
Sbjct: 315 LMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAPHRGVA 372



 Score = 47.4 bits (111), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDA 344
           PKV+E+        I+CG  H  L+T  G ++++G+G  GKLG G+E   ++  P L   
Sbjct: 286 PKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSN 345

Query: 345 LNGSNIHMVACGEFH 359
                + +VACG  H
Sbjct: 346 FLRFIVKLVACGGCH 360


>gi|328865201|gb|EGG13587.1| hypothetical protein DFA_11348 [Dictyostelium fasciculatum]
          Length = 628

 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 169/351 (48%), Gaps = 50/351 (14%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           ++ + D+ +   P  +         S++CG++H++ ++  G+++SWG G+GG+ GHG EA
Sbjct: 163 QLGTGDQTNRATPTPIAIATPTVFTSVSCGAQHSMALSNYGELYSWGCGTGGRTGHGSEA 222

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
               P+++ AL G  I  +A G  H+ A  L G +YTW  G +  G LG  +   H  P 
Sbjct: 223 PSLSPQVVSALVGKQITSMAGGMLHSAATDLRGSVYTW--GWNKYGQLGNNTAKKHLSPN 280

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           K+   ME   +  + CG  HT  +T+ G +++FG    G LG G  + +  P++V+  + 
Sbjct: 281 KLR-DMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLGVGGYADSQQPKKVDLPEH 339

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-----AEPRVV 509
              +++  G +HT  +             +   +++WG  ++G LG GD     ++P+++
Sbjct: 340 AVDIVS--GYYHTLCLT------------NKGNVYSWGYMSDGALGLGDIAGHQSKPKLI 385

Query: 510 PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIK 569
           P                       L+     +S     Y  +   G  G  P   +G++ 
Sbjct: 386 P-----------------------LSHIRHNYSDSMDSYNSIYESGGEGTNPRYAKGDVA 422

Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN-ENKQTPTLVEA 619
               E IA G+++ A++++  ++Y +G G + ++G+G N E++  P  V++
Sbjct: 423 ----EKIAAGAWNSAIITTSGKLYCFGFGDSYRIGNGTNTEDQDIPCQVKS 469



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 150/307 (48%), Gaps = 23/307 (7%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD-LYTW 372
           QI+SWG    G+     ++ +  P  ++ L    + ++A   G+ H  A+   G+ +Y W
Sbjct: 97  QIYSWGYNYFGQCASNSQSIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVHPGNQVYAW 156

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
             G +  G LG   + +   P  ++     +  +S+ CG  H+ A+++ G+L+++G GT 
Sbjct: 157 --GCNRWGQLGTGDQTNRATPTPIAIATPTV-FTSVSCGAQHSMALSNYGELYSWGCGTG 213

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           G  GHG  + +  P+ V  L   +    + G+ H+AA  ++ G            ++TWG
Sbjct: 214 GRTGHGSEAPSLSPQVVSALVGKQITSMAGGMLHSAA-TDLRG-----------SVYTWG 261

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
               GQLG+  A+  + P  ++  +     KV CG + T  LTA G ++S G    GQLG
Sbjct: 262 WNKYGQLGNNTAKKHLSPNKLRDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLG 321

Query: 553 SPG-STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
             G +  + P +++      +  DI  G YH   +++K  VY+WG  ++G LG GD    
Sbjct: 322 VGGYADSQQPKKVD---LPEHAVDIVSGYYHTLCLTNKGNVYSWGYMSDGALGLGDIAGH 378

Query: 612 QT-PTLV 617
           Q+ P L+
Sbjct: 379 QSKPKLI 385



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 13/215 (6%)

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETL--KELKTVMASCGVWHTAAIVEVAGKTSGS 480
           +++++G   FG      +S   +P  VE L   +L+ +  + G  H  AIV         
Sbjct: 97  QIYSWGYNYFGQCASNSQSIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVH-------- 148

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
                 +++ WG    GQLG GD   R  P  + ++    F  V+CG   ++AL+  G++
Sbjct: 149 ---PGNQVYAWGCNRWGQLGTGDQTNRATPTPIAIATPTVFTSVSCGAQHSMALSNYGEL 205

Query: 541 FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
           +S G    G+ G          ++   +  + I  +A G  H A    +  VYTWG    
Sbjct: 206 YSWGCGTGGRTGHGSEAPSLSPQVVSALVGKQITSMAGGMLHSAATDLRGSVYTWGWNKY 265

Query: 601 GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           GQLG+   +   +P  +  +    V  V CG N T
Sbjct: 266 GQLGNNTAKKHLSPNKLRDMEKHHVVKVTCGKNHT 300



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 17/226 (7%)

Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHE-DFDGLGDVFIWGEGLGNGLLGGAVNG 273
           G  D  +R+ T     I+  +  +S S G+ H       G+++ WG G G    G   +G
Sbjct: 165 GTGDQTNRA-TPTPIAIATPTVFTSVSCGAQHSMALSNYGELYSWGCGTG----GRTGHG 219

Query: 274 VEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
            E  S      L P+V+ + V     S+A G  H+     +G +++WG    G+LG+   
Sbjct: 220 SEAPS------LSPQVVSALVGKQITSMAGGMLHSAATDLRGSVYTWGWNKYGQLGNNTA 273

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
                P  +  +   ++  V CG+ HT  +T  G +Y++G  +   G LG         P
Sbjct: 274 KKHLSPNKLRDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNV--CGQLGVGGYADSQQP 331

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGD 439
           +KV      + I S   G +HT  +T+ G ++++G  + GALG GD
Sbjct: 332 KKVDLPEHAVDIVS---GYYHTLCLTNKGNVYSWGYMSDGALGLGD 374


>gi|8131930|gb|AAF73141.1|AF148798_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 683

 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 167/346 (48%), Gaps = 43/346 (12%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H  +VT   +++ +G  + G+LG G ++ VS P  + AL    +   ACG  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
              T  G +Y  G        LG   E S +    +S      +I  +  G   +AA+T 
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTF--HLISFFTSQRKIKQLSAGSNTSAALTE 157

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            G+LF +GD + G +G  + ++  VP++V   K +  +  SCG +H+A +      T G 
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWI--SCGYYHSAFVT-----TEG- 209

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDA------EPRVVP-LCVKVSDDISFCKVACGHSITIA 533
                 +L+T+G+   G+LG  +        P+ VP +  KV       +VACG   T+ 
Sbjct: 210 ------QLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKV------VQVACGGGHTVV 257

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAVVS 587
           LT    V++ G   +GQLG     G F      P  IE +IK + I  IACG  H A+++
Sbjct: 258 LTEKA-VYTFGLGQFGQLG----LGTFLFETSVPKAIE-HIKDQKISFIACGENHTALIT 311

Query: 588 SKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
               +YT+G G +G+LG G  ++ N+  PTL        V+ V CG
Sbjct: 312 DMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCG 357



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 124/276 (44%), Gaps = 50/276 (18%)

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
           + CG  HTA +T   KL+ FG   +G LG G +S+ S P  V+ LK  K   A+CG  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 468 AAIVE------VAGKTSGSNGLSSKK---------------------------------- 487
               E        G   G  GL   +                                  
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDG 159

Query: 488 -LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
            LF WGD +EGQ+G  +     VP  V V   IS+  ++CG+  +  +T  GQ+++ G  
Sbjct: 160 ELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISW--ISCGYYHSAFVTTEGQLYTFGEP 217

Query: 547 DYGQLGSPGS---TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           + G+LG P       + P  + G I  + ++ +ACG  H  V++ K+ VYT+G G  GQL
Sbjct: 218 ECGKLGLPNQLLVNHRMPQPVPG-IPGKVVQ-VACGGGHTVVLTEKA-VYTFGLGQFGQL 274

Query: 604 GHGDNE-NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G G        P  +E ++D+++  + CG N TA I
Sbjct: 275 GLGTFLFETSVPKAIEHIKDQKISFIACGENHTALI 310



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS--YPKLID 343
           +PK +E         IACG  H  L+T  G ++++G+G  GKLG G+E   +   P L  
Sbjct: 285 VPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCS 344

Query: 344 ALNGSNIHMVACGEFHT 360
                 + +V+CG  HT
Sbjct: 345 NFLRFIVQLVSCGGCHT 361


>gi|198435791|ref|XP_002121699.1| PREDICTED: similar to NEK (NEver in mitosis Kinase) Like family
           member (nekl-1) [Ciona intestinalis]
          Length = 1265

 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 141/306 (46%), Gaps = 39/306 (12%)

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ---IS 406
           I  VA G  H   VT    +Y+WG+  +  G LG      H  P      +E L+   I+
Sbjct: 583 IRQVAVGTNHVVVVTTERVVYSWGENAY--GQLGH----GHLEPVAKPHVIEALKGKPIT 636

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
           +  CG   +  +T  G L T GDG+ G LG G+ SST+ P  VE L  +     +CG  H
Sbjct: 637 TTSCGSNFSVFVTDNGILLTCGDGSQGCLGQGNLSSTTRPSMVEPLLSVDVSTVACGDAH 696

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
             A+             S  +++ WG G++G+LG G  +  + P  V ++  I    V C
Sbjct: 697 VVALS------------SEGEIYAWGCGSQGRLGTGHDDHCIEPHRVAINQAIR--DVRC 742

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIE------------ 574
           GH  T+ +T  G + + G+  Y +LG    TG F       +K   +E            
Sbjct: 743 GHDGTMFITDVGTLLACGNNQYNKLGLNERTG-FIMMFNNRLKKTEVECRKTPTVVKSIK 801

Query: 575 ---DIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
              D+A G +H  V++  ++V   G    GQ+G GDN+ + +P LV+ ++D  V  V CG
Sbjct: 802 GVVDVAMGRHHTTVLTESNQVLMLGSNKEGQMGTGDNKLRTSPYLVKCIKDYDVMVVACG 861

Query: 632 SNFTAA 637
           + +TA 
Sbjct: 862 NTYTAV 867



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 146/304 (48%), Gaps = 15/304 (4%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + +A G+ H V+VT +  ++SWGE + G+LGHG    V+ P +I+AL G  I   +CG  
Sbjct: 584 RQVAVGTNHVVVVTTERVVYSWGENAYGQLGHGHLEPVAKPHVIEALKGKPITTTSCGSN 643

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
            +  VT +G L T GDG  + G LGQ +  S   P  V   +  + +S++ CG  H  A+
Sbjct: 644 FSVFVTDNGILLTCGDG--SQGCLGQGNLSSTTRPSMVEPLL-SVDVSTVACGDAHVVAL 700

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           +S G+++ +G G+ G LG G       P  V   + ++ V   CG   T  I +V    +
Sbjct: 701 SSEGEIYAWGCGSQGRLGTGHDDHCIEPHRVAINQAIRDV--RCGHDGTMFITDVGTLLA 758

Query: 479 GSN------GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
             N      GL+ +  F        +L   + E R  P  VK    +    VA G   T 
Sbjct: 759 CGNNQYNKLGLNERTGFIM--MFNNRLKKTEVECRKTPTVVKSIKGV--VDVAMGRHHTT 814

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
            LT + QV  +GS   GQ+G+  +  +    +   IK   +  +ACG+ + AV +S + V
Sbjct: 815 VLTESNQVLMLGSNKEGQMGTGDNKLRTSPYLVKCIKDYDVMVVACGNTYTAVGTSNNIV 874

Query: 593 YTWG 596
             WG
Sbjct: 875 LYWG 878



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 121/267 (45%), Gaps = 19/267 (7%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P V+E+       + +CGS  +V VT  G + + G+GS G LG G  +  + P +++ L 
Sbjct: 624 PHVIEALKGKPITTTSCGSNFSVFVTDNGILLTCGDGSQGCLGQGNLSSTTRPSMVEPLL 683

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
             ++  VACG+ H  A++  G++Y WG G  + G LG   +     P +V+       I 
Sbjct: 684 SVDVSTVACGDAHVVALSSEGEIYAWGCG--SQGRLGTGHDDHCIEPHRVAINQ---AIR 738

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-------PREVETLKELKTVM 459
            + CG   T  IT  G L   G+  +  LG  +R+   +         EVE  K    V 
Sbjct: 739 DVRCGHDGTMFITDVGTLLACGNNQYNKLGLNERTGFIMMFNNRLKKTEVECRKTPTVVK 798

Query: 460 ASCGVWHTAAIVEVA-GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
           +  GV      V+VA G+   +    S ++   G   EGQ+G GD + R  P  VK   D
Sbjct: 799 SIKGV------VDVAMGRHHTTVLTESNQVLMLGSNKEGQMGTGDNKLRTSPYLVKCIKD 852

Query: 519 ISFCKVACGHSITIALTATGQVFSMGS 545
                VACG++ T   T+   V   GS
Sbjct: 853 YDVMVVACGNTYTAVGTSNNIVLYWGS 879



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 36/266 (13%)

Query: 390 HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV 449
           H  P  + G    ++I  +  G  H   +T+   ++++G+  +G LGHG     + P  +
Sbjct: 570 HLTP--IEGLPSKVKIRQVAVGTNHVVVVTTERVVYSWGENAYGQLGHGHLEPVAKPHVI 627

Query: 450 ETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV 509
           E LK       SCG   +  + +        NG+    L T GDG++G LG G+      
Sbjct: 628 EALKGKPITTTSCGSNFSVFVTD--------NGI----LLTCGDGSQGCLGQGNLSSTTR 675

Query: 510 PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNI 568
           P  V+    +    VACG +  +AL++ G++++ G    G+LG+        P R+  N 
Sbjct: 676 PSMVEPLLSVDVSTVACGDAHVVALSSEGEIYAWGCGSQGRLGTGHDDHCIEPHRVAIN- 734

Query: 569 KHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN----------------ENKQ 612
             + I D+ CG      ++    +   G     +LG  +                 E ++
Sbjct: 735 --QAIRDVRCGHDGTMFITDVGTLLACGNNQYNKLGLNERTGFIMMFNNRLKKTEVECRK 792

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
           TPT+V+++  K V  V  G + T  +
Sbjct: 793 TPTVVKSI--KGVVDVAMGRHHTTVL 816



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 1/100 (1%)

Query: 562 TRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALR 621
           T IEG      I  +A G+ H+ VV+++  VY+WG+ A GQLGHG  E    P ++EAL+
Sbjct: 572 TPIEGLPSKVKIRQVAVGTNHVVVVTTERVVYSWGENAYGQLGHGHLEPVAKPHVIEALK 631

Query: 622 DKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNF 661
            K + +  CGSNF+  +    G+ +       GC  Q N 
Sbjct: 632 GKPITTTSCGSNFSVFVT-DNGILLTCGDGSQGCLGQGNL 670



 Score = 43.5 bits (101), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 38/84 (45%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           +A G  H  ++T+  Q+   G    G++G G     + P L+  +   ++ +VACG  +T
Sbjct: 806 VAMGRHHTTVLTESNQVLMLGSNKEGQMGTGDNKLRTSPYLVKCIKDYDVMVVACGNTYT 865

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQ 384
              T +  +  WG     L +  Q
Sbjct: 866 AVGTSNNIVLYWGSRFGPLDMTSQ 889


>gi|330802866|ref|XP_003289433.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
 gi|325080475|gb|EGC34029.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
          Length = 1719

 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 162/368 (44%), Gaps = 68/368 (18%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS---NIHMVACGE 357
           I+ G+ H  ++T +G +++WG+G  GKLGHG     S P+L++         +  VA G 
Sbjct: 166 ISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVSVANGG 225

Query: 358 FHTCAVTLSGDLYTW-GDGIHNLGLLGQVSEISHWIPRKVSGQMEGL------------- 403
            HT A+T+ G++Y++ G+    LG LG +S   +  P+ V+ Q                 
Sbjct: 226 KHTVALTVCGNVYSFGGNDSCQLG-LGNISSSYYSTPQLVTFQSPQSLSNSNSSSPIIMS 284

Query: 404 -------------------QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS 444
                              +I  + C    +AAI+  G L+T+G G  G LGHGD    S
Sbjct: 285 NSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQS 344

Query: 445 VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD- 503
            P++V +L     V  S G  H+ A+ +              ++F+WG G  GQLGHG  
Sbjct: 345 TPKQVMSLHGHTIVDMSLGGGHSMALTKRG------------EVFSWGRGENGQLGHGTF 392

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF--- 560
              ++ P  ++   + +   ++ G   +IA+   G +F+ G  DYG LG   S       
Sbjct: 393 TSQQMTPKQIQAFQNKTIKVISAGGYHSIAIDTNGSMFAWGRGDYGVLGVSSSLDSLGDI 452

Query: 561 --PTRIEGNIK------------HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             P  I+                 R+I +++ G  H    +   ++Y+WG G+  +LG  
Sbjct: 453 NSPVLIKSLNNSNGSNNSNSSAGERFI-NVSSGFQHNVAQTENGDLYSWGCGSGNRLGLA 511

Query: 607 DNENKQTP 614
           + EN+  P
Sbjct: 512 NEENQLIP 519



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 124/270 (45%), Gaps = 51/270 (18%)

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE---TLKELKTVMASCGV 464
           I  G  HT+ IT  G L+T+GDG  G LGHG   S S PR VE   T   L+ V  + G 
Sbjct: 166 ISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVSVANGG 225

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD------AEPRVVPL------- 511
            HT A+  V G            ++++G     QLG G+      + P++V         
Sbjct: 226 KHTVALT-VCGN-----------VYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLS 273

Query: 512 ------CVKVSDDIS----------------FCKVACGHSITIALTATGQVFSMGSADYG 549
                  + +S+  S                  K++C  + + A++  G +++ G  D G
Sbjct: 274 NSNSSSPIIMSNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNG 333

Query: 550 QLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           +LG   S  +   +   ++    I D++ G  H   ++ + EV++WG+G NGQLGHG   
Sbjct: 334 RLGHGDSLMQSTPKQVMSLHGHTIVDMSLGGGHSMALTKRGEVFSWGRGENGQLGHGTFT 393

Query: 610 NKQ-TPTLVEALRDKQVKSVVCGSNFTAAI 638
           ++Q TP  ++A ++K +K +  G   + AI
Sbjct: 394 SQQMTPKQIQAFQNKTIKVISAGGYHSIAI 423



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 119/253 (47%), Gaps = 35/253 (13%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++C +  +  ++K G +++WG G  G+LGHG     S PK + +L+G  I  ++ G  H+
Sbjct: 308 LSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQSTPKQVMSLHGHTIVDMSLGGGHS 367

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T  G++++WG G +  G LG  +  S  +  K     +   I  I  G +H+ AI +
Sbjct: 368 MALTKRGEVFSWGRGEN--GQLGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAIDT 425

Query: 421 AGKLFTFGDGTFGALG-------HGDRSSTSVPREVETLKEL---------KTVMASCGV 464
            G +F +G G +G LG        GD +S  + + +               + +  S G 
Sbjct: 426 NGSMFAWGRGDYGVLGVSSSLDSLGDINSPVLIKSLNNSNGSNNSNSSAGERFINVSSGF 485

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
            H  A  E        NG     L++WG G+  +LG  + E +++P   K++D  +  K 
Sbjct: 486 QHNVAQTE--------NG----DLYSWGCGSGNRLGLANEENQLIP--KKLNDRSNNSKP 531

Query: 525 A---CGHSITIAL 534
           A   CG  ITI +
Sbjct: 532 AFFSCGEIITIIV 544



 Score = 45.1 bits (105), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP-KLIDALNGSNIHMVACGEF 358
           +++ G +H V  T+ G ++SWG GSG +LG   E +   P KL D  N S     +CGE 
Sbjct: 480 NVSSGFQHNVAQTENGDLYSWGCGSGNRLGLANEENQLIPKKLNDRSNNSKPAFFSCGEI 539

Query: 359 HTCAV 363
            T  V
Sbjct: 540 ITIIV 544


>gi|291407336|ref|XP_002719873.1| PREDICTED: retinitis pigmentosa GTPase regulator-like [Oryctolagus
           cuniculus]
          Length = 882

 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 167/343 (48%), Gaps = 37/343 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H  +VT   +++ +G  + G+LG G +  ++ P  + AL    +  VACG  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKTTINKPTCVKALKPEKVKYVACGRNHT 99

Query: 361 CAVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
              T  G++Y T G+    LG LG     + + P  +S      +I  +  G   +AA+T
Sbjct: 100 LVSTEEGNVYATGGNNDGQLG-LGDTEGRNTFYP--ISFFTSQHKIKQLSAGSNTSAALT 156

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G+LF +GD + G +G  + ++  VP +V   K +  +  SCG +H +A V + G    
Sbjct: 157 ENGELFMWGDNSEGQIGLKNVTNVCVPHQVTIGKPISWI--SCGYYH-SAFVTMDG---- 209

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDA---EPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
                  +L+T+G+   G+LG  +      +   L  ++ + +   +VACG   T+ LT 
Sbjct: 210 -------ELYTFGECENGKLGLPEELLINHKTPQLVTRIPEKV--IQVACGGGHTVVLTE 260

Query: 537 TGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           T  V++ G   +GQLG     G F      P  IE  IK   I  I+CG  H A+++   
Sbjct: 261 T-IVYTFGLGQFGQLG----LGTFIFETSEPKAIE-YIKDHKISSISCGENHTALITELG 314

Query: 591 EVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
            +YT+G G  G+LG G  +  N+  PTL        ++ V CG
Sbjct: 315 RMYTFGDGRYGKLGLGLENFTNQFVPTLCCDFLRFMIQLVACG 357



 Score = 52.8 bits (125), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 36/60 (60%)

Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           ++CG  H AVV+  +++Y +G    GQLG G       PT V+AL+ ++VK V CG N T
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKTTINKPTCVKALKPEKVKYVACGRNHT 99



 Score = 49.3 bits (116), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 11/111 (9%)

Query: 252 LGDVFIWGEGLGN-GLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
           L +  ++  GLG  G LG      E S         PK +E        SI+CG  H  L
Sbjct: 258 LTETIVYTFGLGQFGQLGLGTFIFETSE--------PKAIEYIKDHKISSISCGENHTAL 309

Query: 311 VTKQGQIFSWGEGSGGKLGHGVE--ADVSYPKLIDALNGSNIHMVACGEFH 359
           +T+ G+++++G+G  GKLG G+E   +   P L        I +VACG  H
Sbjct: 310 ITELGRMYTFGDGRYGKLGLGLENFTNQFVPTLCCDFLRFMIQLVACGGCH 360


>gi|295789057|ref|NP_001171422.1| X-linked retinitis pigmentosa GTPase regulator isoform 2 [Mus
           musculus]
 gi|26325790|dbj|BAC26649.1| unnamed protein product [Mus musculus]
          Length = 972

 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 167/354 (47%), Gaps = 59/354 (16%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H  +VT   +++ +G  + G+LG G +A +  P  I AL    + + ACG  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137

Query: 361 CAVTLSGDLYTWGDGIHNLGLLG--------QVSEISHWIPRKVSGQMEGLQISSICCGP 412
              T +G +Y  G   +N G LG           +I  + P           I  +  G 
Sbjct: 138 LVSTDTGGVYAAGG--NNEGQLGLGDTDDRDTFHQIVFFTPADT--------IKQLSAGA 187

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
             +AA+T  GKLF +GD + G +G  D+S+  +P EV   K +  +  SCG +H +A V 
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYH-SAFVT 244

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-------AEPRVVPLCVKVSDDISFCKVA 525
           + G           +L+T+G+   G+LG  +       +  RV+ +  +V       +VA
Sbjct: 245 MDG-----------ELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERV------IQVA 287

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACG 579
           CG   T+ LT    V++ G   +GQLG     G F      P  IE  IK + I  I+CG
Sbjct: 288 CGGGHTVVLTEK-VVYAFGLGQFGQLG----LGTFLFETSEPKIIE-RIKDQKICHISCG 341

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
             H A+++    +YT+G G +G+LG G  +  N+  PTL        V+ + CG
Sbjct: 342 ENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 143/297 (48%), Gaps = 33/297 (11%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDALNGSNIHMVACGEFHT 360
           ACG  H ++ T  G +++ G  + G+LG G   D  ++ +++       I  ++ G   +
Sbjct: 131 ACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTS 190

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T  G L+ WGD  ++ G +G   + +  IP +V+    G  IS I CG +H+A +T 
Sbjct: 191 AALTEDGKLFMWGD--NSEGQIGLEDKSNVCIPHEVTV---GKPISWISCGYYHSAFVTM 245

Query: 421 AGKLFTFGDGTFGALGHGDR--SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
            G+L+TFG+   G LG  +    +   P+ V  + E + +  +CG  HT  + E      
Sbjct: 246 DGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTE------ 298

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHG-----DAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
                  K ++ +G G  GQLG G      +EP++    ++   D   C ++CG + T  
Sbjct: 299 -------KVVYAFGLGQFGQLGLGTFLFETSEPKI----IERIKDQKICHISCGENHTAL 347

Query: 534 LTATGQVFSMGSADYGQ--LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
           +T  G +++ G   +G+  LG    T +F   +  N     ++ IACG  H+ V ++
Sbjct: 348 MTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFAT 404



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 35/264 (13%)

Query: 215 GLDDANSRSS--------TADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGL 266
           GL D + R +         AD+ +  LS+  ++S+  +  ED    G +F+WG+    G 
Sbjct: 158 GLGDTDDRDTFHQIVFFTPADTIK-QLSAGANTSA--ALTED----GKLFMWGDN-SEGQ 209

Query: 267 LGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGG 326
           +G           D+ +  +P   E TV      I+CG  H+  VT  G+++++GE   G
Sbjct: 210 IG---------LEDKSNVCIPH--EVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENG 258

Query: 327 KLGHGVEADVSY--PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQ 384
           KLG   E  +++  P+ +  +    I  VACG  HT  +T   +   +  G+   G LG 
Sbjct: 259 KLGLPNELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVLT---EKVVYAFGLGQFGQLGL 314

Query: 385 VSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS 444
            + +      K+  +++  +I  I CG  HTA +T  G L+TFGDG  G LG G  + T+
Sbjct: 315 GTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTN 374

Query: 445 --VPREVETLKELKTVMASCGVWH 466
              P            + +CG  H
Sbjct: 375 QFFPTLCSNFLRFAVQLIACGGCH 398



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 11/141 (7%)

Query: 507 RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEG 566
           RV P        I F       S ++ +  TG VF+ G   + +          P++   
Sbjct: 20  RVAPAIFPKQAQIPFAGFGMAESESL-VPDTGAVFTFGKTKFAE--------NIPSKFW- 69

Query: 567 NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVK 626
             K+     ++CG  H A+V+  +++Y +G    GQLG G       PT ++AL+ ++VK
Sbjct: 70  -FKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVK 128

Query: 627 SVVCGSNFTAAICLHKGVSIA 647
              CG N T       GV  A
Sbjct: 129 LAACGRNHTLVSTDTGGVYAA 149


>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
 gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
           DSM 13941]
          Length = 792

 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 172/386 (44%), Gaps = 34/386 (8%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V  WG   G G LG      + ++ DR   +    L S V     +IA G  H   + 
Sbjct: 86  GGVMCWGRN-GFGQLG------DGTTTDRSTPVAVSGLTSGV----TAIAAGYAHTCALM 134

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +  WG+   G+LG G   D S P  +  L  S +  +A G+ HTCA T SG +  W
Sbjct: 135 SSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLA-SGVTAIAAGDDHTCARTSSGGVMCW 193

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           GD  +  G LG  +      P  VSG   G  +++I  G  HT A+ S+G ++ +GD   
Sbjct: 194 GD--NWSGQLGDGTTTDRSTPVAVSGLGSG--VTAIAAGGSHTCALMSSGGVWCWGDNWS 249

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           G LG G  +  S P  V  L    T +A+ G  HT A              SS  +  WG
Sbjct: 250 GQLGDGTTTDRSTPVAVSGLASGVTAIAAGGF-HTCART------------SSGGVMCWG 296

Query: 493 DGAEGQLGHGDAEPRVVPLCVK-VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
               GQLG G    R  P+ V  ++  ++   +A G S T ALT++G V+  G   +GQL
Sbjct: 297 ANWSGQLGDGTTTARSTPVAVSGLASGVT--AIAAGDSHTCALTSSGGVWCWGYNFFGQL 354

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
           G  G+T    T +  +     +  IA G +H   + S   V  WG+  +GQLG G    +
Sbjct: 355 GD-GTTTDRSTPVAVSGLGSGVTAIAAGDFHTCALMSSGGVRCWGRNKDGQLGDGTTTTR 413

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAA 637
            TP  V  L    V ++  G + T A
Sbjct: 414 STPVAVSGLV-SGVTAIAAGDDHTCA 438



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 156/347 (44%), Gaps = 25/347 (7%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           +IA G  H   +T  G +  WG    G+LG G   D S P  +  L  S +  +A G  H
Sbjct: 71  AIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRSTPVAVSGLT-SGVTAIAAGYAH 129

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           TCA+  SG +  WGD  +  G LG  +      P  VSG   G  +++I  G  HT A T
Sbjct: 130 TCALMSSGGVMCWGD--NWSGQLGDGTTTDRSTPVAVSGLASG--VTAIAAGDDHTCART 185

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
           S+G +  +GD   G LG G  +  S P  V  L    T +A+ G  HT A+         
Sbjct: 186 SSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLGSGVTAIAAGGS-HTCAL--------- 235

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK-VSDDISFCKVACGHSITIALTATG 538
              +SS  ++ WGD   GQLG G    R  P+ V  ++  ++   +A G   T A T++G
Sbjct: 236 ---MSSGGVWCWGDNWSGQLGDGTTTDRSTPVAVSGLASGVT--AIAAGGFHTCARTSSG 290

Query: 539 QVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
            V   G+   GQLG   +T +  P  + G      +  IA G  H   ++S   V+ WG 
Sbjct: 291 GVMCWGANWSGQLGDGTTTARSTPVAVSGLASG--VTAIAAGDSHTCALTSSGGVWCWGY 348

Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
              GQLG G   ++ TP  V  L    V ++  G   T A+    GV
Sbjct: 349 NFFGQLGDGTTTDRSTPVAVSGL-GSGVTAIAAGDFHTCALMSSGGV 394



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 177/410 (43%), Gaps = 34/410 (8%)

Query: 213 SGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE-DFDGLGDVFIWGEGLGNGLLGGAV 271
           SG L D  + + +       L+S V++ + G  H       G V+ WG     G LG   
Sbjct: 300 SGQLGDGTTTARSTPVAVSGLASGVTAIAAGDSHTCALTSSGGVWCWGYNF-FGQLG--- 355

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG 331
              + ++ DR   +    L S V     +IA G  H   +   G +  WG    G+LG G
Sbjct: 356 ---DGTTTDRSTPVAVSGLGSGV----TAIAAGDFHTCALMSSGGVRCWGRNKDGQLGDG 408

Query: 332 VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHW 391
                S P  +  L  S +  +A G+ HTCA T SG +  WGD  +  G LG  +     
Sbjct: 409 TTTTRSTPVAVSGLV-SGVTAIAAGDDHTCARTSSGGVMCWGD--NWSGQLGDGTTTDRS 465

Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
            P  VSG   G  +++I  G  HT A+ S+G ++ +G  + G LG G  +    P  V  
Sbjct: 466 TPVAVSGLGSG--VTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDRGTPVAVSG 523

Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPL 511
           L    T +AS GV HT A+             SS  +  WG    GQLG G    R  P+
Sbjct: 524 LPSEVTAIASGGV-HTCALT------------SSGGVMCWGANWSGQLGDGTTTARSTPV 570

Query: 512 CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKH 570
            V          +A G   T ALT++G V+  G+   GQLG   +T +  P  + G    
Sbjct: 571 AVS-GLPSGVMAIAAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTARSTPVAVSG--LP 627

Query: 571 RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
             +  IA GS+H   ++S   V+ WG   +GQLG G   +  TP  V  L
Sbjct: 628 SGVTAIAAGSFHTCALTSSGGVWCWGANWSGQLGDGSYTDSSTPVAVSGL 677



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 148/334 (44%), Gaps = 24/334 (7%)

Query: 289 VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
           V  S +V    +IA G  H    T  G +  WG+   G+LG G   D S P  +  L GS
Sbjct: 417 VAVSGLVSGVTAIAAGDDHTCARTSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGL-GS 475

Query: 349 NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSI 408
            +  +A G  HTCA+  SG ++ WG   ++ G LG  +      P  VSG     ++++I
Sbjct: 476 GVTAIAAGGSHTCALMSSGGVWCWGR--NSSGQLGDGTTTDRGTPVAVSGLPS--EVTAI 531

Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTA 468
             G  HT A+TS+G +  +G    G LG G  ++ S P  V  L      +A+ G  HT 
Sbjct: 532 ASGGVHTCALTSSGGVMCWGANWSGQLGDGTTTARSTPVAVSGLPSGVMAIAA-GDLHTC 590

Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK-VSDDISFCKVACG 527
           A+             SS  ++ WG  + GQLG G    R  P+ V  +   ++   +A G
Sbjct: 591 ALT------------SSGGVWCWGANSSGQLGDGTTTARSTPVAVSGLPSGVT--AIAAG 636

Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGST-GKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
              T ALT++G V+  G+   GQLG    T    P  + G      +  IA G +H    
Sbjct: 637 SFHTCALTSSGGVWCWGANWSGQLGDGSYTDSSTPVAVSG--LPSGVTAIAAGRFHTCAR 694

Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           +    V+ W     GQLG G   +  TP  V  L
Sbjct: 695 TGSGGVWCWASNRYGQLGDGSYTDSSTPVAVSGL 728



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 158/356 (44%), Gaps = 35/356 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V  WG+   +G LG      + ++ DR   +    L S V     +IA G  H   + 
Sbjct: 443 GGVMCWGDNW-SGQLG------DGTTTDRSTPVAVSGLGSGV----TAIAAGGSHTCALM 491

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G ++ WG  S G+LG G   D   P  +  L  S +  +A G  HTCA+T SG +  W
Sbjct: 492 SSGGVWCWGRNSSGQLGDGTTTDRGTPVAVSGLP-SEVTAIASGGVHTCALTSSGGVMCW 550

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           G   +  G LG  +  +   P  VSG   G+   +I  G  HT A+TS+G ++ +G  + 
Sbjct: 551 G--ANWSGQLGDGTTTARSTPVAVSGLPSGVM--AIAAGDLHTCALTSSGGVWCWGANSS 606

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           G LG G  ++ S P  V  L    T +A+ G +HT A+             SS  ++ WG
Sbjct: 607 GQLGDGTTTARSTPVAVSGLPSGVTAIAA-GSFHTCALT------------SSGGVWCWG 653

Query: 493 DGAEGQLGHGDAEPRVVPLCVK-VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
               GQLG G       P+ V  +   ++   +A G   T A T +G V+   S  YGQL
Sbjct: 654 ANWSGQLGDGSYTDSSTPVAVSGLPSGVT--AIAAGRFHTCARTGSGGVWCWASNRYGQL 711

Query: 552 GSPGST-GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
           G    T    P  + G +    +  IA G  H    +S   V  WG  ++GQLG G
Sbjct: 712 GDGSYTDSSTPVAVSGLVSG--VTAIAAGVVHTCARTSSGGVMCWGANSSGQLGDG 765



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 105/234 (44%), Gaps = 18/234 (7%)

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +++I  G  HT A+TS+G +  +G   FG LG G  +  S P  V  L    T +A+ G 
Sbjct: 69  VTAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTTDRSTPVAVSGLTSGVTAIAA-GY 127

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK-VSDDISFCK 523
            HT A+            +SS  +  WGD   GQLG G    R  P+ V  ++  ++   
Sbjct: 128 AHTCAL------------MSSGGVMCWGDNWSGQLGDGTTTDRSTPVAVSGLASGVT--A 173

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHI 583
           +A G   T A T++G V   G    GQLG  G+T    T +  +     +  IA G  H 
Sbjct: 174 IAAGDDHTCARTSSGGVMCWGDNWSGQLGD-GTTTDRSTPVAVSGLGSGVTAIAAGGSHT 232

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             + S   V+ WG   +GQLG G   ++ TP  V  L    V ++  G   T A
Sbjct: 233 CALMSSGGVWCWGDNWSGQLGDGTTTDRSTPVAVSGLA-SGVTAIAAGGFHTCA 285


>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
           carolinensis]
          Length = 1081

 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 169/359 (47%), Gaps = 42/359 (11%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           ++ WGEG    L  G   GV      R     P   +  VVL    +ACG +H +L+   
Sbjct: 2   LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPA--DQAVVL----VACGERHTLLLRDD 55

Query: 315 GQIFSWGEGSGGKLGH----GVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           G + S G+ S G+LG     G E     P+LI AL    +  V+CG+ H+ AV   G +Y
Sbjct: 56  GGVASCGDNSRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVY 115

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WG G    G LG        IP+ ++  +   ++  + CG  H+ A+T+ G++F++G  
Sbjct: 116 SWGAG--TFGQLGTGELGDRLIPKTINA-LSKYKVIQVACGHDHSIALTNDGRIFSWGQN 172

Query: 431 TFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
             G LG G D SS + P++V  L  +     + G  H+ A+  ++G   G          
Sbjct: 173 IHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFAL-SLSGVVYG---------- 221

Query: 490 TWGDGAEGQLGHGDAEPR---VVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
            WG     QLG   A+P+     P  +     +    V+CG   T  LT  G V++ G  
Sbjct: 222 -WGRNNAHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDD 280

Query: 547 DYGQLG-SPGSTGKF-PTRIEGNIKHRYIED----IACGSYHIAV-VSSKSEVYTWGKG 598
             GQLG +  S+ KF P ++E      +I+     +ACGSYH  V +S+  ++ ++G+G
Sbjct: 281 SAGQLGRNSSSSPKFGPQKVE------WIDGPVSLLACGSYHTLVRISTSGQLLSFGRG 333



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 159/332 (47%), Gaps = 29/332 (8%)

Query: 317 IFSWGEGSGGKLG----HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           ++ WGEGS G+LG     GV   V +     A     + +VACGE HT  +   G + + 
Sbjct: 2   LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASC 61

Query: 373 GDGIHNLGLLGQV----SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           GD  ++ G LG+      E   + P  +   +E  ++  + CG  H+ A+ + G+++++G
Sbjct: 62  GD--NSRGQLGRRLPSGQEKRSYGPELIQA-LETQKVVHVSCGKEHSLAVCNKGRVYSWG 118

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
            GTFG LG G+     +P+ +  L + K +  +CG  H+ A+             +  ++
Sbjct: 119 AGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALT------------NDGRI 166

Query: 489 FTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           F+WG    GQLG G D   +  P  V   D I   +VA G + + AL+ +G V+  G  +
Sbjct: 167 FSWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSGVVYGWGRNN 226

Query: 548 YGQLGSPGSTGK---FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
             QLG   +  K   F       ++   +  ++CG+ H AV++    VYT+G  + GQLG
Sbjct: 227 AHQLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSAGQLG 286

Query: 605 HGDNEN-KQTPTLVEALRDKQVKSVVCGSNFT 635
              + + K  P  VE + D  V  + CGS  T
Sbjct: 287 RNSSSSPKFGPQKVEWI-DGPVSLLACGSYHT 317



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 120/231 (51%), Gaps = 23/231 (9%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           G V+ WG G    LG G LG              D L+PK + +        +ACG  H+
Sbjct: 112 GRVYSWGAGTFGQLGTGELG--------------DRLIPKTINALSKYKVIQVACGHDHS 157

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
           + +T  G+IFSWG+   G+LG G + +  + P+ + AL+G  +  VA G  H+ A++LSG
Sbjct: 158 IALTNDGRIFSWGQNIHGQLGLGKDISSQASPQQVSALDGIPLAQVAAGGAHSFALSLSG 217

Query: 368 DLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            +Y WG +  H LGL     +   + P  ++  +  L ++ + CG  HTA +T  G ++T
Sbjct: 218 VVYGWGRNNAHQLGLSQAKPKEQIFKPYSIAA-LRSLDVAFVSCGAEHTAVLTQNGSVYT 276

Query: 427 FGDGTFGALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           FGD + G LG    SS    P++VE +    +++A CG +HT   +  +G+
Sbjct: 277 FGDDSAGQLGRNSSSSPKFGPQKVEWIDGPVSLLA-CGSYHTLVRISTSGQ 326



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 126/280 (45%), Gaps = 23/280 (8%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ-ISSICCGPWHTAAITSAGKLFTF 427
           LY WG+G      LG+   +S  +P +   +    Q +  + CG  HT  +   G + + 
Sbjct: 2   LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASC 61

Query: 428 GDGTFGALGH----GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
           GD + G LG     G    +  P  ++ L+  K V  SCG  H+ A+             
Sbjct: 62  GDNSRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVC------------ 109

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
           +  ++++WG G  GQLG G+   R++P  +         +VACGH  +IALT  G++FS 
Sbjct: 110 NKGRVYSWGAGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSIALTNDGRIFSW 169

Query: 544 GSADYGQ--LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           G   +GQ  LG   S+   P ++   +    +  +A G  H   +S    VY WG+    
Sbjct: 170 GQNIHGQLGLGKDISSQASPQQVSA-LDGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAH 228

Query: 602 QLGHGDNENKQT---PTLVEALRDKQVKSVVCGSNFTAAI 638
           QLG    + K+    P  + ALR   V  V CG+  TA +
Sbjct: 229 QLGLSQAKPKEQIFKPYSIAALRSLDVAFVSCGAEHTAVL 268



 Score = 42.0 bits (97), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 8/108 (7%)

Query: 540 VFSMGSADYGQLG---SPGSTGKFPTRIEGNIK-HRYIEDIACGSYHIAVVSSKSEVYTW 595
           ++  G    GQLG     G +G  P R        + +  +ACG  H  ++     V + 
Sbjct: 2   LYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQAVVLVACGERHTLLLRDDGGVASC 61

Query: 596 GKGANGQLGH----GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
           G  + GQLG     G  +    P L++AL  ++V  V CG   + A+C
Sbjct: 62  GDNSRGQLGRRLPSGQEKRSYGPELIQALETQKVVHVSCGKEHSLAVC 109


>gi|301755358|ref|XP_002913533.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Ailuropoda melanoleuca]
          Length = 1011

 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 164/346 (47%), Gaps = 43/346 (12%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H  +VT   +++ +G  + G+LG G ++ V+ P  + AL    +   ACG  HT
Sbjct: 50  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHT 109

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
              T  G +Y  G        LG   E + +    +S      +I  +  G   +AA+T 
Sbjct: 110 LVSTEGGKVYASGGNNEGQLGLGDTDERNSF--HLISFFTSQRKIKQLSAGSNTSAALTE 167

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            G+LF +GD + G +G  + ++  VP++V   K +  +  SCG +H+A +      T G 
Sbjct: 168 DGELFMWGDNSEGQIGLKNITNVCVPQQVTVGKPISWI--SCGYYHSAFVT-----TEG- 219

Query: 481 NGLSSKKLFTWGDGAEGQLGH------GDAEPRVVP-LCVKVSDDISFCKVACGHSITIA 533
                 +L+T+G+   G+LG           P+ VP +  KV       +VACG   T+ 
Sbjct: 220 ------ELYTFGEPESGKLGLPKQLLVNHRMPQSVPGIPEKV------VQVACGGGHTVV 267

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAVVS 587
           LT    V++ G   +GQLG     G F      P  IE +IK   I  I CG  H A+++
Sbjct: 268 LTEKA-VYTFGLGQFGQLG----LGTFLFETPVPKVIE-HIKDLKISSIFCGENHTALIT 321

Query: 588 SKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
               +YT+G G +G+LG G  +  N+ TPTL        V+ V CG
Sbjct: 322 DLGLMYTFGDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACG 367



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 127/276 (46%), Gaps = 50/276 (18%)

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
           + CG  HTA +T   KL+ FG   +G LG G +S+ + P  V+ LK  K   A+CG  HT
Sbjct: 50  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHT 109

Query: 468 AAIVE------VAGKTSGSNGL----------------SSKK------------------ 487
               E        G   G  GL                S +K                  
Sbjct: 110 LVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQLSAGSNTSAALTEDG 169

Query: 488 -LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
            LF WGD +EGQ+G  +     VP  V V   IS+  ++CG+  +  +T  G++++ G  
Sbjct: 170 ELFMWGDNSEGQIGLKNITNVCVPQQVTVGKPISW--ISCGYYHSAFVTTEGELYTFGEP 227

Query: 547 DYGQLGSPGS---TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           + G+LG P       + P  + G I  + ++ +ACG  H  V++ K+ VYT+G G  GQL
Sbjct: 228 ESGKLGLPKQLLVNHRMPQSVPG-IPEKVVQ-VACGGGHTVVLTEKA-VYTFGLGQFGQL 284

Query: 604 GHGDNE-NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G G        P ++E ++D ++ S+ CG N TA I
Sbjct: 285 GLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALI 320



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE--ADVSYPKLID 343
           +PKV+E    L   SI CG  H  L+T  G ++++G+G  GKLG G+E   +   P L  
Sbjct: 295 VPKVIEHIKDLKISSIFCGENHTALITDLGLMYTFGDGRHGKLGLGLENFTNQFTPTLCS 354

Query: 344 ALNGSNIHMVACGEFHT 360
                 + +VACG  HT
Sbjct: 355 NFLRFIVQLVACGGCHT 371


>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 316

 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 134/270 (49%), Gaps = 18/270 (6%)

Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIF-SWGEGSGGKLGHGVEADVSYPKLID 343
           +L + L ST +L      C   +A  V   G +  SWG G  G+LGHG   D   P  + 
Sbjct: 37  MLARFLISTPLLPESWRLCSKVNASAVNFPGNVVCSWGRGEDGQLGHGDTDDRLLPTKLS 96

Query: 344 ALNGSNIHMVACGEFHTCAVTLSG-DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
           A +G +I  V CG  +T A + SG D+Y+WG G  + G LG       +IP  +   ++G
Sbjct: 97  AFDGQDIVSVTCGADYTVARSKSGKDVYSWGWG--DFGRLGHGDPSDLFIPHPIRA-LQG 153

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
           L+I  I CG  H  A+T   K+ ++G    G LG G    + VP+++   + ++  M + 
Sbjct: 154 LRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAA 213

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
           G  H+ AI E               L+ WG G  G LG GD   R++P  V +  D    
Sbjct: 214 GAEHSVAITE------------DGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGD-KIV 260

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLG 552
            V+CG   TI+++++G +++ G + YGQLG
Sbjct: 261 MVSCGWRHTISISSSGGLYTHGWSKYGQLG 290



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 127/245 (51%), Gaps = 17/245 (6%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQ-IFSWGEGSGGKLGHGVE 333
           ++   D  D LLP  L +    D  S+ CG+ + V  +K G+ ++SWG G  G+LGHG  
Sbjct: 80  QLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDP 139

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +D+  P  I AL G  I  ++CG+ H  AVT+   + +WG   +    LG   + SH +P
Sbjct: 140 SDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKD-SH-VP 197

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           +K+    EG++I  +  G  H+ AIT  G L+ +G G +G LG GD +   +P +V    
Sbjct: 198 QKILA-FEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDG 256

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
           + K VM SCG  HT +I             SS  L+T G    GQLGHGD E  +VP  V
Sbjct: 257 D-KIVMVSCGWRHTISIS------------SSGGLYTHGWSKYGQLGHGDFEDCLVPRKV 303

Query: 514 KVSDD 518
           +   D
Sbjct: 304 QALSD 308



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 132/278 (47%), Gaps = 20/278 (7%)

Query: 355 CGEFHTCAVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
           C + +  AV   G++  +WG G    G LG        +P K+S   +G  I S+ CG  
Sbjct: 55  CSKVNASAVNFPGNVVCSWGRG--EDGQLGHGDTDDRLLPTKLSA-FDGQDIVSVTCGAD 111

Query: 414 HTAAITSAGK-LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           +T A + +GK ++++G G FG LGHGD S   +P  +  L+ L+    SCG  H  A+  
Sbjct: 112 YTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVT- 170

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
                         K+ +WG    G+LG G  +   VP  +   + I    VA G   ++
Sbjct: 171 -----------MENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSV 219

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
           A+T  G ++  G   YG LG   +  +  P ++  NI    I  ++CG  H   +SS   
Sbjct: 220 AITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKV--NIDGDKIVMVSCGWRHTISISSSGG 277

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVV 629
           +YT G    GQLGHGD E+   P  V+AL DK +  V+
Sbjct: 278 LYTHGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQVI 315



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/206 (37%), Positives = 108/206 (52%), Gaps = 24/206 (11%)

Query: 254 DVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAV 309
           DV+ WG G    LG+G              D  D  +P  + +   L  + I+CG  H +
Sbjct: 122 DVYSWGWGDFGRLGHG--------------DPSDLFIPHPIRALQGLRIKQISCGDCHCL 167

Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
            VT + ++ SWG    G+LG G   D   P+ I A  G  I MVA G  H+ A+T  GDL
Sbjct: 168 AVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDL 227

Query: 370 YTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           Y WG G + NLG LG  ++    IP KV+  ++G +I  + CG  HT +I+S+G L+T G
Sbjct: 228 YGWGWGRYGNLG-LGDTND--RLIPEKVN--IDGDKIVMVSCGWRHTISISSSGGLYTHG 282

Query: 429 DGTFGALGHGDRSSTSVPREVETLKE 454
              +G LGHGD     VPR+V+ L +
Sbjct: 283 WSKYGQLGHGDFEDCLVPRKVQALSD 308



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 80/150 (53%), Gaps = 1/150 (0%)

Query: 490 TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ-VFSMGSADY 548
           +WG G +GQLGHGD + R++P  +   D      V CG   T+A + +G+ V+S G  D+
Sbjct: 72  SWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDF 131

Query: 549 GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           G+LG    +  F       ++   I+ I+CG  H   V+ +++V +WG+  NG+LG G  
Sbjct: 132 GRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTT 191

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           ++   P  + A    ++K V  G+  + AI
Sbjct: 192 KDSHVPQKILAFEGIRIKMVAAGAEHSVAI 221



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 10/121 (8%)

Query: 540 VFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS-YHIAVVSSKSEVYTWGK 597
           V S G  + GQLG   +  +  PT++      + I  + CG+ Y +A   S  +VY+WG 
Sbjct: 70  VCSWGRGEDGQLGHGDTDDRLLPTKLSA-FDGQDIVSVTCGADYTVARSKSGKDVYSWGW 128

Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRN 657
           G  G+LGHGD  +   P  + AL+  ++K + CG     A+ +       ++ + S  RN
Sbjct: 129 GDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTM-------ENKVLSWGRN 181

Query: 658 Q 658
           Q
Sbjct: 182 Q 182



 Score = 39.7 bits (91), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 19/105 (18%)

Query: 253 GDVFIWGEG-LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI---ACGSKHA 308
           GD++ WG G  GN  LG           D  D L+P+     V +D   I   +CG +H 
Sbjct: 225 GDLYGWGWGRYGNLGLG-----------DTNDRLIPE----KVNIDGDKIVMVSCGWRHT 269

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMV 353
           + ++  G +++ G    G+LGHG   D   P+ + AL+   I  V
Sbjct: 270 ISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQV 314


>gi|328872806|gb|EGG21173.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 900

 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 191/452 (42%), Gaps = 93/452 (20%)

Query: 252 LGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
            GDV+ +G G   G LG           ++ +   P V+ +        +ACG+ H++ +
Sbjct: 52  FGDVYSFGRG-REGQLG---------HPEKYNTAHPNVITALAHERITRVACGNFHSLAL 101

Query: 312 TKQGQIFSWG------------EGSGGKL---GHGVEADVSYPKLIDALNG--------- 347
           T  G+I+ WG            E   G +   G G  + ++   L   L+G         
Sbjct: 102 TDTGKIYEWGQLHEIDKSAKGLEAPSGLIEMKGIGFASRIAEQSLSQYLSGDKAAYDPTS 161

Query: 348 ---SNIHMVACG------------EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI 392
              SN++  +              EF   A +   D      G H    +G++ +     
Sbjct: 162 KNISNVNSQSAQNEDAEDLTNKDEEFDAAAGSGGDDSQNEQKGKH----IGKIVDRVQLT 217

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
           P  V G ++  Q+  +  G  ++AA+T +GK+FT+G    G LG GDR    +P++V+  
Sbjct: 218 PLLV-GSIKNQQVVDMSAGWAYSAAVTKSGKVFTWGFNEKGQLGLGDRWFHGLPQQVKFF 276

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP-- 510
             +  V  SCG  H   I +               LFTWG G  GQLGHG  +  + P  
Sbjct: 277 TNVHIVSVSCGRQHIGVISD------------QGDLFTWGLGVFGQLGHGKLKSCLHPKK 324

Query: 511 -LCVKVSDDIS--FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG--------- 558
            L    +D ++    +VACG + T+ALT  G+++S G  +YGQLG+              
Sbjct: 325 VLAFSEADQLNQKVRQVACGANFTMALTVDGRLWSFGHGEYGQLGATEENQYRDWNRGGN 384

Query: 559 ------------KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
                         P ++E  +    ++ + CG  H  VV+  ++VY+WG GA+G LG G
Sbjct: 385 GNGNEREAHLQYAVPQQVEA-LASVKVKQVTCGHLHTIVVTEDNDVYSWGWGASGCLGFG 443

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           D + +  P  V AL  + V S+  G   +  +
Sbjct: 444 DRKFQLVPQRVPALSGEIVSSISAGEKHSLVV 475



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 180/428 (42%), Gaps = 81/428 (18%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           ++  A  +D L P V+++   +     ACG  H++ VT+ G ++S+G G  G+LGH  + 
Sbjct: 13  QLGHALEKDHLDPSVIQNLSGMRIVMSACGEAHSLAVTEFGDVYSFGRGREGQLGHPEKY 72

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD---------------GIHNL 379
           + ++P +I AL    I  VACG FH+ A+T +G +Y WG                G+  +
Sbjct: 73  NTAHPNVITALAHERITRVACGNFHSLALTDTGKIYEWGQLHEIDKSAKGLEAPSGLIEM 132

Query: 380 GLLGQVSEISHW-IPRKVSGQMEGL--------QISSICCGPWHTAAITSAGKLFTFGDG 430
             +G  S I+   + + +SG              ++S          +T+  + F    G
Sbjct: 133 KGIGFASRIAEQSLSQYLSGDKAAYDPTSKNISNVNSQSAQNEDAEDLTNKDEEFDAAAG 192

Query: 431 TFGALGHGDRSSTSV----------PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           + G     ++    +          P  V ++K  + V  S G  ++AA+ +        
Sbjct: 193 SGGDDSQNEQKGKHIGKIVDRVQLTPLLVGSIKNQQVVDMSAGWAYSAAVTK-------- 244

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
               S K+FTWG   +GQLG GD     +P  VK   ++    V+CG      ++  G +
Sbjct: 245 ----SGKVFTWGFNEKGQLGLGDRWFHGLPQQVKFFTNVHIVSVSCGRQHIGVISDQGDL 300

Query: 541 FSMGSADYGQLGSPGSTGKF-----PTRI----EGNIKHRYIEDIACGSYHIAVVSSKSE 591
           F+ G   +GQLG     GK      P ++    E +  ++ +  +ACG+     ++    
Sbjct: 301 FTWGLGVFGQLGH----GKLKSCLHPKKVLAFSEADQLNQKVRQVACGANFTMALTVDGR 356

Query: 592 VYTWGKGANGQLGHGDNENKQ---------------------TPTLVEALRDKQVKSVVC 630
           ++++G G  GQLG    EN+                       P  VEAL   +VK V C
Sbjct: 357 LWSFGHGEYGQLG-ATEENQYRDWNRGGNGNGNEREAHLQYAVPQQVEALASVKVKQVTC 415

Query: 631 GSNFTAAI 638
           G   T  +
Sbjct: 416 GHLHTIVV 423



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 130/303 (42%), Gaps = 38/303 (12%)

Query: 232 SLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE 291
           ++S+  S S+Q    ED     + F    G G         G  I     R  L P ++ 
Sbjct: 163 NISNVNSQSAQNEDAEDLTNKDEEFDAAAGSGGDDSQNEQKGKHIGKIVDRVQLTPLLVG 222

Query: 292 STVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH 351
           S        ++ G  ++  VTK G++F+WG    G+LG G       P+ +      +I 
Sbjct: 223 SIKNQQVVDMSAGWAYSAAVTKSGKVFTWGFNEKGQLGLGDRWFHGLPQQVKFFTNVHIV 282

Query: 352 MVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS----S 407
            V+CG  H   ++  GDL+TWG G+   G LG     S   P+KV    E  Q++     
Sbjct: 283 SVSCGRQHIGVISDQGDLFTWGLGV--FGQLGHGKLKSCLHPKKVLAFSEADQLNQKVRQ 340

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS--------------------STSVPR 447
           + CG   T A+T  G+L++FG G +G LG  + +                      +VP+
Sbjct: 341 VACGANFTMALTVDGRLWSFGHGEYGQLGATEENQYRDWNRGGNGNGNEREAHLQYAVPQ 400

Query: 448 EVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR 507
           +VE L  +K    +CG  HT  + E               +++WG GA G LG GD + +
Sbjct: 401 QVEALASVKVKQVTCGHLHTIVVTE------------DNDVYSWGWGASGCLGFGDRKFQ 448

Query: 508 VVP 510
           +VP
Sbjct: 449 LVP 451



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 69/306 (22%), Positives = 117/306 (38%), Gaps = 60/306 (19%)

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
           G++    LG   E  H  P  +   + G++I    CG  H+ A+T  G +++FG G  G 
Sbjct: 7   GVNKQSQLGHALEKDHLDPSVIQN-LSGMRIVMSACGEAHSLAVTEFGDVYSFGRGREGQ 65

Query: 435 LGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG 494
           LGH ++ +T+ P  +  L   +    +CG +H+ A+ +              K++ W   
Sbjct: 66  LGHPEKYNTAHPNVITALAHERITRVACGNFHSLALTDTG------------KIYEW--- 110

Query: 495 AEGQLGHGD--AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
             GQL   D  A+    P  +     I F       S++  L+     +   S +   + 
Sbjct: 111 --GQLHEIDKSAKGLEAPSGLIEMKGIGFASRIAEQSLSQYLSGDKAAYDPTSKNISNVN 168

Query: 553 SPGS----------------------------------TGKFPTRIE------GNIKHRY 572
           S  +                                   GK   R++      G+IK++ 
Sbjct: 169 SQSAQNEDAEDLTNKDEEFDAAAGSGGDDSQNEQKGKHIGKIVDRVQLTPLLVGSIKNQQ 228

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
           + D++ G  + A V+   +V+TWG    GQLG GD      P  V+   +  + SV CG 
Sbjct: 229 VVDMSAGWAYSAAVTKSGKVFTWGFNEKGQLGLGDRWFHGLPQQVKFFTNVHIVSVSCGR 288

Query: 633 NFTAAI 638
                I
Sbjct: 289 QHIGVI 294



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 3/112 (2%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           + S+G     +LGH +E D   P +I  L+G  I M ACGE H+ AVT  GD+Y++G G 
Sbjct: 3   VISFGVNKQSQLGHALEKDHLDPSVIQNLSGMRIVMSACGEAHSLAVTEFGDVYSFGRG- 61

Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
              G LG   + +   P  ++  +   +I+ + CG +H+ A+T  GK++ +G
Sbjct: 62  -REGQLGHPEKYNTAHPNVITA-LAHERITRVACGNFHSLALTDTGKIYEWG 111



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 53/110 (48%)

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           + ++G   + QLGH   +  + P  ++    +     ACG + ++A+T  G V+S G   
Sbjct: 3   VISFGVNKQSQLGHALEKDHLDPSVIQNLSGMRIVMSACGEAHSLAVTEFGDVYSFGRGR 62

Query: 548 YGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
            GQLG P         +   + H  I  +ACG++H   ++   ++Y WG+
Sbjct: 63  EGQLGHPEKYNTAHPNVITALAHERITRVACGNFHSLALTDTGKIYEWGQ 112



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 109/261 (41%), Gaps = 67/261 (25%)

Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
           + +FG      LGH        P  ++ L  ++ VM++CG  H+ A+ E           
Sbjct: 3   VISFGVNKQSQLGHALEKDHLDPSVIQNLSGMRIVMSACGEAHSLAVTEFG--------- 53

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
               ++++G G EGQLGH +      P  +         +VACG+  ++ALT TG+++  
Sbjct: 54  ---DVYSFGRGREGQLGHPEKYNTAHPNVITALAHERITRVACGNFHSLALTDTGKIY-- 108

Query: 544 GSADYGQLGSPGSTGK---------------FPTRIEGNIKHRYIE-DIAC---GSYHIA 584
              ++GQL     + K               F +RI      +Y+  D A     S +I+
Sbjct: 109 ---EWGQLHEIDKSAKGLEAPSGLIEMKGIGFASRIAEQSLSQYLSGDKAAYDPTSKNIS 165

Query: 585 VVSSKS-------------EVYTWGKGANGQLGHGDNENKQ--------------TPTLV 617
            V+S+S             E +    G+ G     D++N+Q              TP LV
Sbjct: 166 NVNSQSAQNEDAEDLTNKDEEFDAAAGSGGD----DSQNEQKGKHIGKIVDRVQLTPLLV 221

Query: 618 EALRDKQVKSVVCGSNFTAAI 638
            +++++QV  +  G  ++AA+
Sbjct: 222 GSIKNQQVVDMSAGWAYSAAV 242


>gi|403331221|gb|EJY64545.1| hypothetical protein OXYTRI_15423 [Oxytricha trifallax]
          Length = 410

 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 160/337 (47%), Gaps = 39/337 (11%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY--PKLID 343
           +P+ +E+   L+ + +  G +H+ ++T+ G+++++G G+ G LGHG E DV +  P+L++
Sbjct: 42  IPQKMEAFDKLNVKKLNIGLRHSAVITEDGKLYTFGSGNWGPLGHGSEKDVKFDNPQLVE 101

Query: 344 ALNGSN--IHMVACGEFHTCAVTLSGDLYTWGDG----------IHNLGLLGQVSEISHW 391
                N  I  V  GE+HT A+T  G++YTWG G             +G LG   +  H+
Sbjct: 102 FFEKRNKKIVEVGLGEYHTAALTSDGEVYTWGYGGKQTLFNWMITQEVGGLGHGDKKHHF 161

Query: 392 IPRKVS-GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
            P+KV   +   +++S I  G +HT AI+  G L+T+G G FG LG+   S +  P   +
Sbjct: 162 FPKKVDFFEKNNIKVSRILAGLYHTIAISDTGDLYTWGRGLFGVLGNASNSYSLTPMLND 221

Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA------ 504
               +K       +      ++VA + +G+  ++   L+ WG    GQLG G        
Sbjct: 222 EFHIMKQEKPDLKI----QKIDVADEYTGAL-MNDGTLYVWGKNDRGQLGTGSGIGIDMI 276

Query: 505 EPRVVPLCVKV---SDDISFCK-VACGHSITIALTATGQVFSMG-SADYGQLGSPGSTGK 559
           E   VP+ + V   +D     K    G +  I       ++ +G   DY    SP     
Sbjct: 277 ESENVPIAITVLDKNDQPHLVKDFHPGQNTMIIRDDEDNIYKVGLKLDY----SPKQVNI 332

Query: 560 FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           F        K   +  ++CG  H  V+++++++  WG
Sbjct: 333 FNEE----FKKEDVTQLSCGRKHYCVLNNQNKLMVWG 365



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 73/235 (31%), Positives = 109/235 (46%), Gaps = 24/235 (10%)

Query: 392 IPRKVSGQMEG---LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV--P 446
           IP+ +  +ME    L +  +  G  H+A IT  GKL+TFG G +G LGHG         P
Sbjct: 38  IPKGIPQKMEAFDKLNVKKLNIGLRHSAVITEDGKLYTFGSGNWGPLGHGSEKDVKFDNP 97

Query: 447 REVETLKEL--KTVMASCGVWHTAAIV---EVAGKTSGSNGLSSKKLFTWGDGAE-GQLG 500
           + VE  ++   K V    G +HTAA+    EV   T G  G   + LF W    E G LG
Sbjct: 98  QLVEFFEKRNKKIVEVGLGEYHTAALTSDGEVY--TWGYGG--KQTLFNWMITQEVGGLG 153

Query: 501 HGDAEPRVVPLCVKV--SDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG 558
           HGD +    P  V     ++I   ++  G   TIA++ TG +++ G   +G LG+  ++ 
Sbjct: 154 HGDKKHHFFPKKVDFFEKNNIKVSRILAGLYHTIAISDTGDLYTWGRGLFGVLGNASNSY 213

Query: 559 KFPTRI--EGNIKHR-----YIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
                +  E +I  +      I+ I     +   + +   +Y WGK   GQLG G
Sbjct: 214 SLTPMLNDEFHIMKQEKPDLKIQKIDVADEYTGALMNDGTLYVWGKNDRGQLGTG 268



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 98/228 (42%), Gaps = 53/228 (23%)

Query: 445 VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA 504
           +P+++E   +L     + G+ H+A I E              KL+T+G G  G LGHG  
Sbjct: 42  IPQKMEAFDKLNVKKLNIGLRHSAVITE------------DGKLYTFGSGNWGPLGHGSE 89

Query: 505 E------PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG--------- 549
           +      P++V    K +  I   +V  G   T ALT+ G+V++ G   YG         
Sbjct: 90  KDVKFDNPQLVEFFEKRNKKI--VEVGLGEYHTAALTSDGEVYTWG---YGGKQTLFNWM 144

Query: 550 ---QLGSPGSTGK----FPTRIE----GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
              ++G  G   K    FP +++     NIK   +  I  G YH   +S   ++YTWG+G
Sbjct: 145 ITQEVGGLGHGDKKHHFFPKKVDFFEKNNIK---VSRILAGLYHTIAISDTGDLYTWGRG 201

Query: 599 ANGQLGHGDNENKQTPTLVEALR-------DKQVKSVVCGSNFTAAIC 639
             G LG+  N    TP L +          D +++ +     +T A+ 
Sbjct: 202 LFGVLGNASNSYSLTPMLNDEFHIMKQEKPDLKIQKIDVADEYTGALM 249


>gi|8131934|gb|AAF73143.1|AF148800_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
           familiaris]
          Length = 918

 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 168/348 (48%), Gaps = 47/348 (13%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H  +VT   +++ +G  + G+LG G ++ VS P  + AL    +   ACG  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEIS--HWIPRKVSGQMEGLQISSICCGPWHTAAI 418
              T  G +Y  G        LG   E S  H I    S +    +I  +  G   +AA+
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQR----KIKQLSAGSNTSAAL 155

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           T  G+LF +GD + G +G  + ++  VP++V   K +  +  SCG +H+A +      T 
Sbjct: 156 TEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWI--SCGYYHSAFVT-----TE 208

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDA------EPRVVP-LCVKVSDDISFCKVACGHSIT 531
           G       +L+T+G+   G+LG  +        P+ VP +  KV       +VACG   T
Sbjct: 209 G-------QLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKV------VQVACGGGHT 255

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAV 585
           + LT    V++ G   +GQLG     G F      P  IE +IK + I  IACG  H A+
Sbjct: 256 VVLTEKA-VYTFGLGQFGQLG----LGTFLFETSVPKAIE-HIKDQKISFIACGENHTAL 309

Query: 586 VSSKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
           ++    +YT+G G +G+LG G  ++ N+  PTL        V+ V CG
Sbjct: 310 ITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCG 357



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 124/276 (44%), Gaps = 50/276 (18%)

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
           + CG  HTA +T   KL+ FG   +G LG G +S+ S P  V+ LK  K   A+CG  HT
Sbjct: 40  LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 468 AAIVE------VAGKTSGSNGLSSKK---------------------------------- 487
               E        G   G  GL   +                                  
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDG 159

Query: 488 -LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
            LF WGD +EGQ+G  +     VP  V V   IS+  ++CG+  +  +T  GQ+++ G  
Sbjct: 160 ELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISW--ISCGYYHSAFVTTEGQLYTFGEP 217

Query: 547 DYGQLGSPGS---TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           + G+LG P       + P  + G I  + ++ +ACG  H  V++ K+ VYT+G G  GQL
Sbjct: 218 ECGKLGLPNQLLVNHRMPQPVPG-IPGKVVQ-VACGGGHTVVLTEKA-VYTFGLGQFGQL 274

Query: 604 GHGDNE-NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G G        P  +E ++D+++  + CG N TA I
Sbjct: 275 GLGTFLFETSVPKAIEHIKDQKISFIACGENHTALI 310



 Score = 48.5 bits (114), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS--YPKLID 343
           +PK +E         IACG  H  L+T  G ++++G+G  GKLG G+E   +   P L  
Sbjct: 285 VPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCS 344

Query: 344 ALNGSNIHMVACGEFHT 360
                 + +V+CG  HT
Sbjct: 345 NFLRFIVQLVSCGGCHT 361


>gi|224083557|ref|XP_002307065.1| predicted protein [Populus trichocarpa]
 gi|222856514|gb|EEE94061.1| predicted protein [Populus trichocarpa]
          Length = 419

 Score =  129 bits (323), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 186/381 (48%), Gaps = 50/381 (13%)

Query: 287 PKVLESTVVLDA--QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY---PKL 341
           PK++ S+   ++  +SI+CG  H + +T+ G++++ G    G+LG  V  + +Y   P  
Sbjct: 54  PKLMNSSSFHNSNLKSISCGGAHTLFLTETGRVYATGLNDFGQLG--VSNNTTYCMEPLE 111

Query: 342 IDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQME 401
           +  L    I  ++ G  H+CA+T+ G+LYTWG   +    LG+ +E    +P KV   + 
Sbjct: 112 VSGLK-KEIVQISAGYHHSCAITVDGELYTWGKNSNGQLGLGKKAENVVPVPTKVE-CLS 169

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGA---------LGHGDRSSTSVPREVETL 452
           G+ I  +     H+ A+T  G+  ++G G  G          LG    SS   PR ++ L
Sbjct: 170 GINIKMVALASEHSIAVTDGGQALSWGGGGSGRLGHGHQSSLLGFFRSSSEYTPRHIKKL 229

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC 512
           + +K    + G+ H+A I E        NG     ++ +G+ A  +L  GDA     P  
Sbjct: 230 EGVKVKNIAAGLLHSACIDE--------NG----SVYIFGEKAVDKLAFGDANNATTPSM 277

Query: 513 VKVSDDISFCK-VACGHSITIALTATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGNIK 569
           +     + + + VACG   T  +T+ G++++ GS + G LG+ GS      P R+EG   
Sbjct: 278 I---GKLPYSQEVACGGYHTCVITSGGELYTWGSNENGCLGN-GSIDVLHIPERVEGPFL 333

Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGAN------------GQLGHGDNENKQTPTLV 617
              +E ++CG  H A +S +  V+TWG G +            GQLGHGD+ +   PTLV
Sbjct: 334 RSPVEKVSCGWKHTAAIS-EGNVFTWGWGGSHGTFSEDGLSSGGQLGHGDDFDYVNPTLV 392

Query: 618 EALRDKQVKSVVCGSNFTAAI 638
              +  +   V CG N T AI
Sbjct: 393 AFEKKMKALEVSCGFNHTGAI 413



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 153/336 (45%), Gaps = 37/336 (11%)

Query: 320 WGEGSGGKLGHGVEADVSYPKLIDA--LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH 377
           WG G  G+LG+G    +  PKL+++   + SN+  ++CG  HT  +T +G +Y    G++
Sbjct: 35  WGNGDYGRLGYGNLDSMWRPKLMNSSSFHNSNLKSISCGGAHTLFLTETGRVYA--TGLN 92

Query: 378 NLGLLGQVSEISHWI-PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
           + G LG  +  ++ + P +VSG  +  +I  I  G  H+ AIT  G+L+T+G  + G LG
Sbjct: 93  DFGQLGVSNNTTYCMEPLEVSGLKK--EIVQISAGYHHSCAITVDGELYTWGKNSNGQLG 150

Query: 437 HGDRSS--TSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG 494
            G ++     VP +VE L  +   M +    H+ A+      T G   LS     +   G
Sbjct: 151 LGKKAENVVPVPTKVECLSGINIKMVALASEHSIAV------TDGGQALSWGGGGSGRLG 204

Query: 495 AEGQ---LGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS------ 545
              Q   LG   +     P  +K  + +    +A G   +  +   G V+  G       
Sbjct: 205 HGHQSSLLGFFRSSSEYTPRHIKKLEGVKVKNIAAGLLHSACIDENGSVYIFGEKAVDKL 264

Query: 546 --ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
              D     +P   GK P          Y +++ACG YH  V++S  E+YTWG   NG L
Sbjct: 265 AFGDANNATTPSMIGKLP----------YSQEVACGGYHTCVITSGGELYTWGSNENGCL 314

Query: 604 GHGDNENKQTPTLVEA-LRDKQVKSVVCGSNFTAAI 638
           G+G  +    P  VE       V+ V CG   TAAI
Sbjct: 315 GNGSIDVLHIPERVEGPFLRSPVEKVSCGWKHTAAI 350



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 19/199 (9%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P+ ++    +  ++IA G  H+  + + G ++ +GE +  KL  G   + + P +I  L 
Sbjct: 223 PRHIKKLEGVKVKNIAAGLLHSACIDENGSVYIFGEKAVDKLAFGDANNATTPSMIGKLP 282

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVS-EISHWIPRKVSGQMEGLQI 405
            S    VACG +HTC +T  G+LYTWG   +  G LG  S ++ H IP +V G      +
Sbjct: 283 YS--QEVACGGYHTCVITSGGELYTWGS--NENGCLGNGSIDVLH-IPERVEGPFLRSPV 337

Query: 406 SSICCGPWHTAAITSAGKLFTFG----DGTF--------GALGHGDRSSTSVPREVETLK 453
             + CG  HTAAI S G +FT+G     GTF        G LGHGD      P  V   K
Sbjct: 338 EKVSCGWKHTAAI-SEGNVFTWGWGGSHGTFSEDGLSSGGQLGHGDDFDYVNPTLVAFEK 396

Query: 454 ELKTVMASCGVWHTAAIVE 472
           ++K +  SCG  HT AI+E
Sbjct: 397 KMKALEVSCGFNHTGAILE 415



 Score = 80.1 bits (196), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 4/153 (2%)

Query: 490 TWGDGAEGQLGHGDAEPRVVPLCVKVSD--DISFCKVACGHSITIALTATGQVFSMGSAD 547
            WG+G  G+LG+G+ +    P  +  S   + +   ++CG + T+ LT TG+V++ G  D
Sbjct: 34  VWGNGDYGRLGYGNLDSMWRPKLMNSSSFHNSNLKSISCGGAHTLFLTETGRVYATGLND 93

Query: 548 YGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
           +GQLG   +T      +E +   + I  I+ G +H   ++   E+YTWGK +NGQLG G 
Sbjct: 94  FGQLGVSNNTTYCMEPLEVSGLKKEIVQISAGYHHSCAITVDGELYTWGKNSNGQLGLGK 153

Query: 608 NENK--QTPTLVEALRDKQVKSVVCGSNFTAAI 638
                   PT VE L    +K V   S  + A+
Sbjct: 154 KAENVVPVPTKVECLSGINIKMVALASEHSIAV 186



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 134/320 (41%), Gaps = 50/320 (15%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +S+    SC    D  G+++ WG+   NG LG       +         +P  +E    +
Sbjct: 122 ISAGYHHSCAITVD--GELYTWGKN-SNGQLG-------LGKKAENVVPVPTKVECLSGI 171

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGK---------LGHGVEADVSYPKLIDALNG 347
           + + +A  S+H++ VT  GQ  SWG G  G+         LG    +    P+ I  L G
Sbjct: 172 NIKMVALASEHSIAVTDGGQALSWGGGGSGRLGHGHQSSLLGFFRSSSEYTPRHIKKLEG 231

Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISS 407
             +  +A G  H+  +  +G +Y +G+   +    G  +  +   P  + G++   Q   
Sbjct: 232 VKVKNIAAGLLHSACIDENGSVYIFGEKAVDKLAFGDANNAT--TPSMI-GKLPYSQ--E 286

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE-TLKELKTVMASCGVWH 466
           + CG +HT  ITS G+L+T+G    G LG+G      +P  VE           SCG  H
Sbjct: 287 VACGGYHTCVITSGGELYTWGSNENGCLGNGSIDVLHIPERVEGPFLRSPVEKVSCGWKH 346

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAE------------GQLGHGDAEPRVVPLCVK 514
           TAAI E               +FTWG G              GQLGHGD    V P  V 
Sbjct: 347 TAAISE-------------GNVFTWGWGGSHGTFSEDGLSSGGQLGHGDDFDYVNPTLVA 393

Query: 515 VSDDISFCKVACGHSITIAL 534
               +   +V+CG + T A+
Sbjct: 394 FEKKMKALEVSCGFNHTGAI 413


>gi|379718300|ref|YP_005310431.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
 gi|378566972|gb|AFC27282.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
          Length = 1239

 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 149/327 (45%), Gaps = 28/327 (8%)

Query: 307  HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
            H + +   G ++ WG    G+LG G     S P  +  L G  + M+A GE HT A+   
Sbjct: 715  HTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTG--MKMIAGGENHTVALRSD 772

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G L+TWG   +  G LG  S  + + P +VS        +++  G  H+ A+ S G ++ 
Sbjct: 773  GTLHTWG--YNGYGQLGDDSTTTRYSPVQVSTLT---NWTAVSAGENHSLALKSDGTVWA 827

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            FG   +G LG G  SS   P +V+ L              T  +   AGK       S  
Sbjct: 828  FGYNGYGQLGDGTTSSQRTPVQVKDL--------------TGVVAIAAGKDFSLALKSDG 873

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             +++WG    G+LG+G      VP+ V +  D+    +A G    +AL   G VF+ G  
Sbjct: 874  TVWSWGQNTYGELGNGTTTRSSVPVQVALLTDVK--AIAAGDYHGVALKKDGSVFAWGYN 931

Query: 547  DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
              G+LG+  ST    T ++  +    I+ IA G YH   + S   V++WG    GQLG+G
Sbjct: 932  GNGELGN-SSTISQSTPVQSGVTG--IKGIAAGPYHTLALKSDGTVWSWGYNGYGQLGNG 988

Query: 607  DNENKQTPTLVEALRDKQVKSVVCGSN 633
            +N ++  P  +  L    + S+  G N
Sbjct: 989  NNTSRSVPAAIPGL--ASIASIAAGEN 1013



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 139/297 (46%), Gaps = 38/297 (12%)

Query: 215  GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGL-GNGLLGGAVNG 273
            G D   +R S      ++  +AVS+    S     DG     +W  G  G G LG     
Sbjct: 787  GDDSTTTRYSPVQVSTLTNWTAVSAGENHSLALKSDGT----VWAFGYNGYGQLG----- 837

Query: 274  VEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
             + +++ +R  +  K L   V     +IA G   ++ +   G ++SWG+ + G+LG+G  
Sbjct: 838  -DGTTSSQRTPVQVKDLTGVV-----AIAAGKDFSLALKSDGTVWSWGQNTYGELGNGTT 891

Query: 334  ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
               S P  +  L  +++  +A G++H  A+   G ++ WG   +  G LG  S IS   P
Sbjct: 892  TRSSVPVQVALL--TDVKAIAAGDYHGVALKKDGSVFAWG--YNGNGELGNSSTISQSTP 947

Query: 394  RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
              V   + G++   I  GP+HT A+ S G ++++G   +G LG+G+ +S SVP  +  L 
Sbjct: 948  --VQSGVTGIK--GIAAGPYHTLALKSDGTVWSWGYNGYGQLGNGNNTSRSVPAAIPGLA 1003

Query: 454  ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
             + ++ A           E      G++G+    L++WG  A GQLG+G      VP
Sbjct: 1004 SIASIAAG----------ENQSIAYGNDGI----LYSWGRNANGQLGNGTTVDTNVP 1046



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 28/201 (13%)

Query: 253  GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            G V+ WG+     LGNG           SS   + ALL          D ++IA G  H 
Sbjct: 873  GTVWSWGQNTYGELGNGT-------TTRSSVPVQVALL---------TDVKAIAAGDYHG 916

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
            V + K G +F+WG    G+LG+      S P +   + G  I  +A G +HT A+   G 
Sbjct: 917  VALKKDGSVFAWGYNGNGELGNSSTISQSTP-VQSGVTG--IKGIAAGPYHTLALKSDGT 973

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +++WG   +  G LG  +  S  +P  + G      I+SI  G   + A  + G L+++G
Sbjct: 974  VWSWG--YNGYGQLGNGNNTSRSVPAAIPGLAS---IASIAAGENQSIAYGNDGILYSWG 1028

Query: 429  DGTFGALGHGDRSSTSVPREV 449
                G LG+G    T+VP +V
Sbjct: 1029 RNANGQLGNGTTVDTNVPHKV 1049



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 8/156 (5%)

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
           S   ++ WG    GQLG G +    VP   KV +      +A G + T+AL + G + + 
Sbjct: 721 SDGTVWGWGYNGHGQLGTGTSNSTSVPG--KVINLTGMKMIAGGENHTVALRSDGTLHTW 778

Query: 544 GSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
           G   YGQLG   +T ++ P ++           ++ G  H   + S   V+ +G    GQ
Sbjct: 779 GYNGYGQLGDDSTTTRYSPVQVS---TLTNWTAVSAGENHSLALKSDGTVWAFGYNGYGQ 835

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           LG G   +++TP  V+ L    V ++  G +F+ A+
Sbjct: 836 LGDGTTSSQRTPVQVKDLTG--VVAIAAGKDFSLAL 869


>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
           africana]
          Length = 1018

 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 141/265 (53%), Gaps = 24/265 (9%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDAL 345
           P ++++   L+   ++CG +H++ V  +G++F+WG GS G+LG G   ++++ P  + AL
Sbjct: 64  PGLIQALETLNVDLLSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKELNFTPMKVKAL 123

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE-ISHWIPRKVSGQMEGLQ 404
            G  I  V+CG +H+ A++  G +++WG+  H  G LG   E +S   P++V   +EG+ 
Sbjct: 124 AGIKIIQVSCGHYHSLALSQDGQVFSWGNNSH--GQLGLGKEFLSQESPQRVKS-LEGIP 180

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGAL---GHGDRSSTSVPREVETLKELKTVMAS 461
           ++ +  G  H+ A++ +G  F +G    G L   G+     +  PR +  LKEL  V  S
Sbjct: 181 LAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYIS 240

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
           CG  HTA + +              K+FT+GD + GQLGHG    +  P  V+  D +  
Sbjct: 241 CGSEHTAVLTQ------------DGKVFTFGDNSSGQLGHGPTAEKRGPQLVEGIDGL-V 287

Query: 522 CKVACG--HSITIALTATGQVFSMG 544
            ++ CG  H++    T T QV S G
Sbjct: 288 SQIDCGSYHTLVYVYT-TRQVISFG 311



 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 167/343 (48%), Gaps = 28/343 (8%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G +H++L+   G + + G+ S G+LG         P LI AL   N+ +++CG+ H+ 
Sbjct: 27  ASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNVDLLSCGKEHSL 86

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV   G ++ WG G      +G+  E+ ++ P KV   + G++I  + CG +H+ A++  
Sbjct: 87  AVCHKGRVFAWGAGSEGQLGIGEFKEL-NFTPMKVKA-LAGIKIIQVSCGHYHSLALSQD 144

Query: 422 GKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           G++F++G+ + G LG G +  S   P+ V++L+ +     + G  H+ A+       SG+
Sbjct: 145 GQVFSWGNNSHGQLGLGKEFLSQESPQRVKSLEGIPLAQVAAGGAHSFAL-----SLSGT 199

Query: 481 NGLSSKKLFTWGDGAEGQLG-HGDAEP--RVVPLCVKVSDDISFCKVACGHSITIALTAT 537
           +       F WG    GQL   G+  P     P  +    ++    ++CG   T  LT  
Sbjct: 200 S-------FGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVLTQD 252

Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAV-VSSKSEVYTW 595
           G+VF+ G    GQLG  P +  + P  +EG      +  I CGSYH  V V +  +V ++
Sbjct: 253 GKVFTFGDNSSGQLGHGPTAEKRGPQLVEG--IDGLVSQIDCGSYHTLVYVYTTRQVISF 310

Query: 596 GKGANGQLGHGDNE----NKQTPTLVEA--LRDKQVKSVVCGS 632
           G+G +       ++    N     L+ A  L + QVK +  G+
Sbjct: 311 GRGPSDTTSSTRSDALTKNSDVSCLISADDLVNVQVKHIFAGT 353



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 114/243 (46%), Gaps = 19/243 (7%)

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G ++     G  H+  + S G +   GD + G LG         P  ++ L+ L   + S
Sbjct: 20  GAELRQAASGERHSLLLLSDGTVHACGDNSCGQLGRRGVPHRKRPGLIQALETLNVDLLS 79

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVPLCVKVSDDIS 520
           CG  H+ A+                ++F WG G+EGQLG G+  E    P+ VK    I 
Sbjct: 80  CGKEHSLAVCH------------KGRVFAWGAGSEGQLGIGEFKELNFTPMKVKALAGIK 127

Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQ--LGSPGSTGKFPTRIEGNIKHRYIEDIAC 578
             +V+CGH  ++AL+  GQVFS G+  +GQ  LG    + + P R++ +++   +  +A 
Sbjct: 128 IIQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVK-SLEGIPLAQVAA 186

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLG-HGDNENKQT--PTLVEALRDKQVKSVVCGSNFT 635
           G  H   +S     + WG    GQL   G+N   Q+  P  + AL++  V  + CGS  T
Sbjct: 187 GGAHSFALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHT 246

Query: 636 AAI 638
           A +
Sbjct: 247 AVL 249



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 9/124 (7%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G  F WG     G L  + N V + S        P+ + +   L    I+CGS+H  ++T
Sbjct: 198 GTSFGWGSN-NAGQLALSGNNVPVQSYK------PRSIGALKELGVVYISCGSEHTAVLT 250

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYT 371
           + G++F++G+ S G+LGHG  A+   P+L++ ++G  +  + CG +HT   V  +  + +
Sbjct: 251 QDGKVFTFGDNSSGQLGHGPTAEKRGPQLVEGIDGL-VSQIDCGSYHTLVYVYTTRQVIS 309

Query: 372 WGDG 375
           +G G
Sbjct: 310 FGRG 313


>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Felis catus]
          Length = 1143

 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 151/290 (52%), Gaps = 31/290 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFH 359
           I CG  H++ ++K G++F+WG+   G+LG G + A ++ P++++ L+G  +  ++ G+ H
Sbjct: 261 ITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAGKAH 320

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTA 416
           + A+++SG++Y+WG   ++ G LG    + H   +     +E L   ++  + CG  HTA
Sbjct: 321 SMALSMSGNIYSWGR--NDFGQLG----LGHTDGKDFPSLIEALDNQKVEFLACGGSHTA 374

Query: 417 AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
            +T  G +FTFG G  G LGH    +   PR V  L   +    +CG  HT A V   G 
Sbjct: 375 LLTKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQHTLAYVSDLG- 433

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV--SDDISF-CKVACGHSITIA 533
                     K+F++G G EGQLG+G    +++PL +K+  +++++F  + +    I IA
Sbjct: 434 ----------KVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELTFESRASEKELIMIA 483

Query: 534 LTATGQVFSMGSAD-YGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
                 +  MG  + Y  L       K PT  EG +K R+I D+    + 
Sbjct: 484 GGNQSILLWMGKKNSYVNLRR-----KIPTLNEGTVK-RWIADVGTKQWQ 527



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 153/347 (44%), Gaps = 37/347 (10%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           PK ++        S+  G+++ ++++  G+ F +               + + +    L 
Sbjct: 207 PKCIKLGKKAKIHSVDQGAEYMLILSSDGKPFEYN------------YSIEHARFQCILQ 254

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQI 405
              I  + CG++H+ A++  G+L+ WG  +H  LG+  Q + I+  IP+ V   + G+ +
Sbjct: 255 EKXIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIA--IPQIVE-NLSGIPL 311

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
             I  G  H+ A++ +G ++++G   FG LG G       P  +E L   K    +CG  
Sbjct: 312 VQISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLACGGS 371

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
           HTA + +        +GL    +FT+G G  GQLGH   +  + P  V         ++A
Sbjct: 372 HTALLTK--------DGL----VFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIA 419

Query: 526 CGHSITIALTA-TGQVFSMGSADYGQLGSPGSTGK---FPTRIEGNIKHRYIEDIACGSY 581
           CG   T+A  +  G+VFS GS   GQLG+ G+  +    P ++  N +    E  A    
Sbjct: 420 CGRQHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSN-EELTFESRASEKE 478

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSV 628
            I +      +  W    N  +    N  ++ PTL E    + +  V
Sbjct: 479 LIMIAGGNQSILLWMGKKNSYV----NLRRKIPTLNEGTVKRWIADV 521



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 100/188 (53%), Gaps = 15/188 (7%)

Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VP 510
           L+E   +  +CG +H+ A+         S G    +LF WG    GQLG G     + +P
Sbjct: 253 LQEKXIIQITCGDYHSLAL---------SKG---GELFAWGQNLHGQLGIGSQFASIAIP 300

Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIK 569
             V+    I   +++ G + ++AL+ +G ++S G  D+GQLG   + GK FP+ IE  + 
Sbjct: 301 QIVENLSGIPLVQISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEA-LD 359

Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVV 629
           ++ +E +ACG  H A+++    V+T+G G +GQLGH   +N+  P LV  L   +V  + 
Sbjct: 360 NQKVEFLACGGSHTALLTKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRVTQIA 419

Query: 630 CGSNFTAA 637
           CG   T A
Sbjct: 420 CGRQHTLA 427



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/195 (32%), Positives = 105/195 (53%), Gaps = 13/195 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++F WG+ L +G LG       I+        +P+++E+   +    I+ G  H++ ++
Sbjct: 275 GELFAWGQNL-HGQLGIGSQFASIA--------IPQIVENLSGIPLVQISAGKAHSMALS 325

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G I+SWG    G+LG G      +P LI+AL+   +  +ACG  HT  +T  G ++T+
Sbjct: 326 MSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTF 385

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G H  G LG  S  +   PR V+ ++ G +++ I CG  HT A ++  GK+F+FG G 
Sbjct: 386 GAGKH--GQLGHNSTQNELRPRLVT-ELAGNRVTQIACGRQHTLAYVSDLGKVFSFGSGK 442

Query: 432 FGALGHGDRSSTSVP 446
            G LG+G   +  +P
Sbjct: 443 EGQLGNGGTHNQLIP 457



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 67/118 (56%), Gaps = 3/118 (2%)

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGS 580
           ++ CG   ++AL+  G++F+ G   +GQLG  S  ++   P  +E N+    +  I+ G 
Sbjct: 260 QITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVE-NLSGIPLVQISAGK 318

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            H   +S    +Y+WG+   GQLG G  + K  P+L+EAL +++V+ + CG + TA +
Sbjct: 319 AHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLACGGSHTALL 376



 Score = 44.3 bits (103), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 15/133 (11%)

Query: 510 PLCVKVSDDISFCKVACGHSITIALTATGQVFSMG-SADYGQLGSPGSTGKFPTRIEGNI 568
           P C+K+        V  G    + L++ G+ F    S ++              R +  +
Sbjct: 207 PKCIKLGKKAKIHSVDQGAEYMLILSSDGKPFEYNYSIEHA-------------RFQCIL 253

Query: 569 KHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN-ENKQTPTLVEALRDKQVKS 627
           + + I  I CG YH   +S   E++ WG+  +GQLG G    +   P +VE L    +  
Sbjct: 254 QEKXIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQ 313

Query: 628 VVCGSNFTAAICL 640
           +  G   + A+ +
Sbjct: 314 ISAGKAHSMALSM 326


>gi|219847607|ref|YP_002462040.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
           9485]
 gi|219541866|gb|ACL23604.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
           DSM 9485]
          Length = 776

 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 185/436 (42%), Gaps = 45/436 (10%)

Query: 216 LDDANSRSSTADSFRISLSSAVSSSSQGSCHE-DFDGLGDVFIWGEG----LGNGLLGGA 270
           L D +   S+       L S V++ + G  H     G G V  WG      LGNGL  G 
Sbjct: 238 LGDGSYTDSSTPVAVSGLPSGVTAIAAGGVHTCALTGSGGVRCWGANYSGQLGNGLTFGR 297

Query: 271 VNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGH 330
                +S        LP            +IA G  H   +T  G ++ WG    G+LG 
Sbjct: 298 STPGAVSG-------LPS--------GVTAIAAGDYHTCALTGSGGVWCWGGNYSGQLGD 342

Query: 331 GVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEIS 389
           G     S P  +  L  S +  +A G++HTCA+  SG +  WG   HN  G LG  +  +
Sbjct: 343 GTTTARSTPVAVSGLP-SGVETIAAGDYHTCALMSSGGVRCWG---HNDRGQLGDGTTTA 398

Query: 390 HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV 449
              P  VSG   G  +++I  G  HT A TS+G ++ +GD + G LG G  + +S P  V
Sbjct: 399 RSTPVAVSGLPSG--VTAIAAGRLHTCARTSSGGVWCWGDNSDGQLGDGSFTDSSTPVAV 456

Query: 450 ETLKE-LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV 508
             L   ++T+ A  G WHT A+              S  ++ WG    GQLG G     +
Sbjct: 457 SGLASGVETIAA--GGWHTCALT------------GSGGVWCWGRNNSGQLGDGSTIYHI 502

Query: 509 VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNI 568
            P+ V          +A G   T ALT +G V+  G    GQLG  G+T    T +  + 
Sbjct: 503 TPVAVS-GLPSGVTAIAAGGVHTCALTGSGGVWCWGGNFAGQLGD-GTTTDRSTPVAVSG 560

Query: 569 KHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSV 628
               +  IA G  H   ++    V+ WG    GQLG G   N+ TP  V  L    V ++
Sbjct: 561 LPSGVTAIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRSTPVAVSGL-PSGVTAI 619

Query: 629 VCGSNFTAAICLHKGV 644
             G  +T A+    GV
Sbjct: 620 AAGLRYTCALTGSGGV 635



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 156/358 (43%), Gaps = 37/358 (10%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           +IA G  H    T  G ++ WG    G+LG G   D S P  +  L  S +  +A G  H
Sbjct: 57  AIAAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSSTPVAVSGLP-SGVTAIAAGGAH 115

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           TCA+T SG+++ WG   +  G LG  S  +   P  VSG   G  +++I  G WHT A T
Sbjct: 116 TCALTSSGEVWCWGSNFY--GQLGDGSYTTRSTPVAVSGLPSG--VTAIAAGGWHTCART 171

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
           S+G ++ +G    G LG G  +  S P  V  L    T +A+ G  HT A          
Sbjct: 172 SSGGVWCWGGNYRGQLGDGTTTDRSTPVAVSGLPSEVTAIAA-GDAHTCAR--------- 221

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
              +SS +++ WG    GQLG G       P+ V          +A G   T ALT +G 
Sbjct: 222 ---MSSGEVWCWGGNNYGQLGDGSYTDSSTPVAVS-GLPSGVTAIAAGGVHTCALTGSGG 277

Query: 540 VFSMGSADYGQLG--------SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
           V   G+   GQLG        +PG+    P+          +  IA G YH   ++    
Sbjct: 278 VRCWGANYSGQLGNGLTFGRSTPGAVSGLPSG---------VTAIAAGDYHTCALTGSGG 328

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADH 649
           V+ WG   +GQLG G    + TP  V  L    V+++  G   T A+    GV    H
Sbjct: 329 VWCWGGNYSGQLGDGTTTARSTPVAVSGL-PSGVETIAAGDYHTCALMSSGGVRCWGH 385



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 153/345 (44%), Gaps = 22/345 (6%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           +IA G  H    T  G ++ WG+ S G+LG G   D S P  +  L  S +  +A G +H
Sbjct: 414 AIAAGRLHTCARTSSGGVWCWGDNSDGQLGDGSFTDSSTPVAVSGLA-SGVETIAAGGWH 472

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           TCA+T SG ++ WG   +N G LG  S I H  P  VSG   G  +++I  G  HT A+T
Sbjct: 473 TCALTGSGGVWCWGR--NNSGQLGDGSTIYHITPVAVSGLPSG--VTAIAAGGVHTCALT 528

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
            +G ++ +G    G LG G  +  S P  V  L    T +A+  + HT A+         
Sbjct: 529 GSGGVWCWGGNFAGQLGDGTTTDRSTPVAVSGLPSGVTAIAAGDI-HTCALT-------- 579

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                S  ++ WG    GQLG G    R  P+ V          +A G   T ALT +G 
Sbjct: 580 ----GSGGVWCWGGNDFGQLGDGTTTNRSTPVAVS-GLPSGVTAIAAGLRYTCALTGSGG 634

Query: 540 VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
           V+  G    GQL    ++   P  + G      +  IA G ++    +S   V  WG   
Sbjct: 635 VWCWGYNLSGQLDDGTTSRSTPVAVSG--LPSGVTAIAAGGWYTCARTSSGGVRCWGANG 692

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           +GQLG G    + TP  V  L    V ++  G   T A+    GV
Sbjct: 693 SGQLGDGTTTKRSTPVAVSGL-PSGVTAIAAGGEHTCALMSSGGV 736



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 146/322 (45%), Gaps = 22/322 (6%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           +IA G  H   +T  G+++ WG    G+LG G     S P  +  L  S +  +A G +H
Sbjct: 108 AIAAGGAHTCALTSSGEVWCWGSNFYGQLGDGSYTTRSTPVAVSGLP-SGVTAIAAGGWH 166

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           TCA T SG ++ WG   +  G LG  +      P  VSG     ++++I  G  HT A  
Sbjct: 167 TCARTSSGGVWCWGG--NYRGQLGDGTTTDRSTPVAVSGLPS--EVTAIAAGDAHTCARM 222

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
           S+G+++ +G   +G LG G  + +S P  V  L    T +A+ GV HT A+       +G
Sbjct: 223 SSGEVWCWGGNNYGQLGDGSYTDSSTPVAVSGLPSGVTAIAAGGV-HTCAL-------TG 274

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
           S G+       WG    GQLG+G    R  P  V          +A G   T ALT +G 
Sbjct: 275 SGGVRC-----WGANYSGQLGNGLTFGRSTPGAVS-GLPSGVTAIAAGDYHTCALTGSGG 328

Query: 540 VFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           V+  G    GQLG   +T +  P  + G      +E IA G YH   + S   V  WG  
Sbjct: 329 VWCWGGNYSGQLGDGTTTARSTPVAVSG--LPSGVETIAAGDYHTCALMSSGGVRCWGHN 386

Query: 599 ANGQLGHGDNENKQTPTLVEAL 620
             GQLG G    + TP  V  L
Sbjct: 387 DRGQLGDGTTTARSTPVAVSGL 408



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 173/400 (43%), Gaps = 48/400 (12%)

Query: 253 GDVFIWGEGLGN--GLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
           G V+ WG   GN  G LG      + ++ DR   +    L S V     +IA G  H   
Sbjct: 174 GGVWCWG---GNYRGQLG------DGTTTDRSTPVAVSGLPSEVT----AIAAGDAHTCA 220

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
               G+++ WG  + G+LG G   D S P  +  L  S +  +A G  HTCA+T SG + 
Sbjct: 221 RMSSGEVWCWGGNNYGQLGDGSYTDSSTPVAVSGLP-SGVTAIAAGGVHTCALTGSGGVR 279

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            WG   +  G LG         P  VSG   G  +++I  G +HT A+T +G ++ +G  
Sbjct: 280 CWG--ANYSGQLGNGLTFGRSTPGAVSGLPSG--VTAIAAGDYHTCALTGSGGVWCWGGN 335

Query: 431 TFGALGHGDRSSTSVPREVETLKE-LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
             G LG G  ++ S P  V  L   ++T+ A  G +HT A+            +SS  + 
Sbjct: 336 YSGQLGDGTTTARSTPVAVSGLPSGVETIAA--GDYHTCAL------------MSSGGVR 381

Query: 490 TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
            WG    GQLG G    R  P+ V          +A G   T A T++G V+  G    G
Sbjct: 382 CWGHNDRGQLGDGTTTARSTPVAVS-GLPSGVTAIAAGRLHTCARTSSGGVWCWGDNSDG 440

Query: 550 QLGSPGSTGKF-----PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
           QLG     G F     P  + G      +E IA G +H   ++    V+ WG+  +GQLG
Sbjct: 441 QLGD----GSFTDSSTPVAVSGLASG--VETIAAGGWHTCALTGSGGVWCWGRNNSGQLG 494

Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
            G      TP  V  L    V ++  G   T A+    GV
Sbjct: 495 DGSTIYHITPVAVSGL-PSGVTAIAAGGVHTCALTGSGGV 533



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 99/326 (30%), Positives = 146/326 (44%), Gaps = 21/326 (6%)

Query: 289 VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
           V  S +    ++IA G  H   +T  G ++ WG  + G+LG G       P  +  L  S
Sbjct: 454 VAVSGLASGVETIAAGGWHTCALTGSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLP-S 512

Query: 349 NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSI 408
            +  +A G  HTCA+T SG ++ WG   +  G LG  +      P  VSG   G  +++I
Sbjct: 513 GVTAIAAGGVHTCALTGSGGVWCWGG--NFAGQLGDGTTTDRSTPVAVSGLPSG--VTAI 568

Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTA 468
             G  HT A+T +G ++ +G   FG LG G  ++ S P  V  L    T +A+ G+ +T 
Sbjct: 569 AAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRSTPVAVSGLPSGVTAIAA-GLRYTC 627

Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH 528
           A+              S  ++ WG    GQL  G    R  P+ V          +A G 
Sbjct: 628 ALT------------GSGGVWCWGYNLSGQLDDGTTS-RSTPVAVS-GLPSGVTAIAAGG 673

Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
             T A T++G V   G+   GQLG  G+T K  T +  +     +  IA G  H   + S
Sbjct: 674 WYTCARTSSGGVRCWGANGSGQLGD-GTTTKRSTPVAVSGLPSGVTAIAAGGEHTCALMS 732

Query: 589 KSEVYTWGKGANGQLGHGDNENKQTP 614
              V+ WG+  +GQLG G    + TP
Sbjct: 733 SGGVWCWGRNDSGQLGDGRPLYRTTP 758



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 92/289 (31%), Positives = 131/289 (45%), Gaps = 39/289 (13%)

Query: 233 LSSAVSSSSQGSCHE-DFDGLGDVFIWGEGLGN--GLLGGAVNGVEISSADRRDALLPKV 289
           L S V++ + G  H     G G V+ WG   GN  G LG      + ++ DR   +    
Sbjct: 510 LPSGVTAIAAGGVHTCALTGSGGVWCWG---GNFAGQLG------DGTTTDRSTPVAVSG 560

Query: 290 LESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN 349
           L S V     +IA G  H   +T  G ++ WG    G+LG G   + S P  +  L  S 
Sbjct: 561 LPSGVT----AIAAGDIHTCALTGSGGVWCWGGNDFGQLGDGTTTNRSTPVAVSGLP-SG 615

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE--ISHWIPRKVSGQMEGLQISS 407
           +  +A G  +TCA+T SG ++ WG   +NL   GQ+ +   S   P  VSG   G  +++
Sbjct: 616 VTAIAAGLRYTCALTGSGGVWCWG---YNL--SGQLDDGTTSRSTPVAVSGLPSG--VTA 668

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
           I  G W+T A TS+G +  +G    G LG G  +  S P  V  L    T +A+ G  HT
Sbjct: 669 IAAGGWYTCARTSSGGVRCWGANGSGQLGDGTTTKRSTPVAVSGLPSGVTAIAAGGE-HT 727

Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
            A+            +SS  ++ WG    GQLG G    R  P+ V  S
Sbjct: 728 CAL------------MSSGGVWCWGRNDSGQLGDGRPLYRTTPVDVVTS 764



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 108/260 (41%), Gaps = 18/260 (6%)

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +++I  G  HT A TS+G ++ +G   FG LG G  + +S P  V  L    T +A+ G 
Sbjct: 55  VTAIAAGGGHTCARTSSGGVWCWGGNDFGRLGDGSYTDSSTPVAVSGLPSGVTAIAAGGA 114

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
            HT A+             SS +++ WG    GQLG G    R  P+ V          +
Sbjct: 115 -HTCALT------------SSGEVWCWGSNFYGQLGDGSYTTRSTPVAVS-GLPSGVTAI 160

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHI 583
           A G   T A T++G V+  G    GQLG   +T +  P  + G      +  IA G  H 
Sbjct: 161 AAGGWHTCARTSSGGVWCWGGNYRGQLGDGTTTDRSTPVAVSGLPSE--VTAIAAGDAHT 218

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
               S  EV+ WG    GQLG G   +  TP  V  L    V ++  G   T A+    G
Sbjct: 219 CARMSSGEVWCWGGNNYGQLGDGSYTDSSTPVAVSGL-PSGVTAIAAGGVHTCALTGSGG 277

Query: 644 VSIADHSICSGCRNQFNFRR 663
           V     +      N   F R
Sbjct: 278 VRCWGANYSGQLGNGLTFGR 297


>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
          Length = 546

 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 128/261 (49%), Gaps = 20/261 (7%)

Query: 294 VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMV 353
           VV  A S   G  H   VT  G +++WG+G  G+LGHG + D   P+ +  + G  +  V
Sbjct: 273 VVFSALSFGAG--HCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIKG-EVKSV 329

Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQME-GLQISSICCGP 412
           + G +HT AVT  G L+TWGDG    G LG        IP  V+  +E G+ +++   G 
Sbjct: 330 SAGFYHTVAVTHHGALFTWGDG--KEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGG 387

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
            HT  +   G++F+FG G  G LGHG+ +    P  +  L+  + V  + G  H+ A+ +
Sbjct: 388 SHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTD 447

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP--LCVKVSDDISFCKVACGHSI 530
                         +++TWG G  G+LGHG     V+P  L +   D I    VA G + 
Sbjct: 448 ------------QGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAH 495

Query: 531 TIALTATGQVFSMGSADYGQL 551
           T    + G + ++G   +G++
Sbjct: 496 TCIFRSEGSLITLGRVSHGRM 516



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 123/256 (48%), Gaps = 18/256 (7%)

Query: 390 HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV 449
           H + R     +  +  S++  G  H AA+T  G ++T+G G +G LGHGD     +P+ V
Sbjct: 260 HRVTRAGLSLLRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPV 319

Query: 450 ETLK-ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV 508
             +K E+K+V  S G +HT A+                 LFTWGDG EG+LGH D   R+
Sbjct: 320 PRIKGEVKSV--SAGFYHTVAVTHHGA------------LFTWGDGKEGKLGHNDNAQRL 365

Query: 509 VPLCVK--VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEG 566
           +P  V   +   +       G S T+ L   GQVFS GS D G+LG      ++      
Sbjct: 366 IPTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLS 425

Query: 567 NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVK 626
            ++      IA G  H   ++ + ++YTWG G  G+LGHG + ++  P  +  +    +K
Sbjct: 426 ALESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIK 485

Query: 627 SVVCGSNFTAAICLHK 642
           ++   +   A  C+ +
Sbjct: 486 AIAVAAG-EAHTCIFR 500



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 130/273 (47%), Gaps = 22/273 (8%)

Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
           ++ G  H  AVT +G +YTWG G    G LG   ++   IP+ V  +++G ++ S+  G 
Sbjct: 278 LSFGAGHCAAVTDTGLVYTWGQG--RYGQLGHGDDVDKIIPQPVP-RIKG-EVKSVSAGF 333

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           +HT A+T  G LFT+GDG  G LGH D +   +P  V    E    +A            
Sbjct: 334 YHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVA------------ 381

Query: 473 VAGKTSGSNGLSSKK---LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHS 529
            A +  GS+ L   +   +F++G G  G+LGHG+   +  P  +   +      +A G +
Sbjct: 382 -AAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFA 440

Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDI--ACGSYHIAVVS 587
            ++ALT  GQ+++ G    G+LG    + +   R    I H  I+ I  A G  H  +  
Sbjct: 441 HSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAHTCIFR 500

Query: 588 SKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           S+  + T G+ ++G++  G        TL  A+
Sbjct: 501 SEGSLITLGRVSHGRMAEGSCAQDMLDTLHTAI 533



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 108/223 (48%), Gaps = 26/223 (11%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           G V+ WG+G    LG+G              D  D ++P+ +   +  + +S++ G  H 
Sbjct: 292 GLVYTWGQGRYGQLGHG--------------DDVDKIIPQPVPR-IKGEVKSVSAGFYHT 336

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN--GSNIHMVACGEFHTCAVTLS 366
           V VT  G +F+WG+G  GKLGH   A    P L+ A    G  +     G  HT  +   
Sbjct: 337 VAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLVLNRR 396

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
           G ++++G G  + G LG  ++   W P  +S  +E  +  SI  G  H+ A+T  G+++T
Sbjct: 397 GQVFSFGSG--DSGRLGHGNDNDQWSPTFLSA-LESERCVSIAAGFAHSVALTDQGQIYT 453

Query: 427 FGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHT 467
           +G G  G LGHG  S   +PR++  +    +K +  + G  HT
Sbjct: 454 WGCGKLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAHT 496



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 15/189 (7%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVV--LDAQSIACGSKHAVL 310
           G +F WG+G   G LG           D    L+P ++ + +   +   +   G  H ++
Sbjct: 343 GALFTWGDG-KEGKLG---------HNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLV 392

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           + ++GQ+FS+G G  G+LGHG + D   P  + AL       +A G  H+ A+T  G +Y
Sbjct: 393 LNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESERCVSIAAGFAHSVALTDQGQIY 452

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSG-QMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
           TWG G   LG LG  S+    +PRK++    + ++  ++  G  HT    S G L T G 
Sbjct: 453 TWGCG--KLGRLGHGSDSDEVLPRKLALISHDTIKAIAVAAGEAHTCIFRSEGSLITLGR 510

Query: 430 GTFGALGHG 438
            + G +  G
Sbjct: 511 VSHGRMAEG 519


>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 279

 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/253 (32%), Positives = 128/253 (50%), Gaps = 17/253 (6%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+ G+ H V +     + SWG G  G+LGHG   D   P  + A +G +I  V CG  +T
Sbjct: 17  ISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYT 76

Query: 361 CAVTLSG-DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
            A + SG D+Y+WG G  + G LG       +IP  +   ++GL+I  I CG  H  A+T
Sbjct: 77  VARSKSGKDVYSWGWG--DFGRLGHGDPSDLFIPHPIR-ALQGLRIKQISCGDCHCLAVT 133

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
              K+ ++G    G LG G    + VP+++   + ++  M + G  H+ AI E       
Sbjct: 134 MENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITE------- 186

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                   L+ WG G  G LG GD   R++P  V +  D     V+CG   TI+++++G 
Sbjct: 187 -----DGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGD-KIVMVSCGWRHTISISSSGG 240

Query: 540 VFSMGSADYGQLG 552
           +++ G + YGQLG
Sbjct: 241 LYTHGWSKYGQLG 253



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 127/245 (51%), Gaps = 17/245 (6%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQ-IFSWGEGSGGKLGHGVE 333
           ++   D  D LLP  L +    D  S+ CG+ + V  +K G+ ++SWG G  G+LGHG  
Sbjct: 43  QLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDP 102

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
           +D+  P  I AL G  I  ++CG+ H  AVT+   + +WG   +    LG   + SH +P
Sbjct: 103 SDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKD-SH-VP 160

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           +K+    EG++I  +  G  H+ AIT  G L+ +G G +G LG GD +   +P +V    
Sbjct: 161 QKIL-AFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDG 219

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
           + K VM SCG  HT +I             SS  L+T G    GQLGHGD E  +VP  V
Sbjct: 220 D-KIVMVSCGWRHTISIS------------SSGGLYTHGWSKYGQLGHGDFEDCLVPRKV 266

Query: 514 KVSDD 518
           +   D
Sbjct: 267 QALSD 271



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 135/283 (47%), Gaps = 19/283 (6%)

Query: 349 NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSI 408
           ++ +++ G  HT A+     + +WG G    G LG        +P K+S   +G  I S+
Sbjct: 13  HVLLISAGASHTVALLTGNVVCSWGRG--EDGQLGHGDTDDRLLPTKLS-AFDGQDIVSV 69

Query: 409 CCGPWHTAAITSAGK-LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
            CG  +T A + +GK ++++G G FG LGHGD S   +P  +  L+ L+    SCG  H 
Sbjct: 70  TCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHC 129

Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
            A+                K+ +WG    G+LG G  +   VP  +   + I    VA G
Sbjct: 130 LAVT------------MENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAG 177

Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVV 586
              ++A+T  G ++  G   YG LG   +  +  P ++  NI    I  ++CG  H   +
Sbjct: 178 AEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKV--NIDGDKIVMVSCGWRHTISI 235

Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVV 629
           SS   +YT G    GQLGHGD E+   P  V+AL DK +  V+
Sbjct: 236 SSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQALSDKLISQVI 278



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/206 (37%), Positives = 108/206 (52%), Gaps = 24/206 (11%)

Query: 254 DVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAV 309
           DV+ WG G    LG+G              D  D  +P  + +   L  + I+CG  H +
Sbjct: 85  DVYSWGWGDFGRLGHG--------------DPSDLFIPHPIRALQGLRIKQISCGDCHCL 130

Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
            VT + ++ SWG    G+LG G   D   P+ I A  G  I MVA G  H+ A+T  GDL
Sbjct: 131 AVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDL 190

Query: 370 YTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           Y WG G + NLG LG  ++    IP KV+  ++G +I  + CG  HT +I+S+G L+T G
Sbjct: 191 YGWGWGRYGNLG-LGDTND--RLIPEKVN--IDGDKIVMVSCGWRHTISISSSGGLYTHG 245

Query: 429 DGTFGALGHGDRSSTSVPREVETLKE 454
              +G LGHGD     VPR+V+ L +
Sbjct: 246 WSKYGQLGHGDFEDCLVPRKVQALSD 271



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 91/183 (49%), Gaps = 13/183 (7%)

Query: 457 TVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
            ++ S G  HT A+            L+   + +WG G +GQLGHGD + R++P  +   
Sbjct: 14  VLLISAGASHTVAL------------LTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAF 61

Query: 517 DDISFCKVACGHSITIALTATGQ-VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIED 575
           D      V CG   T+A + +G+ V+S G  D+G+LG    +  F       ++   I+ 
Sbjct: 62  DGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQ 121

Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           I+CG  H   V+ +++V +WG+  NG+LG G  ++   P  + A    ++K V  G+  +
Sbjct: 122 ISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHS 181

Query: 636 AAI 638
            AI
Sbjct: 182 VAI 184



 Score = 59.3 bits (142), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 10/137 (7%)

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS-Y 581
           ++ G S T+AL     V S G  + GQLG   +  +  PT++      + I  + CG+ Y
Sbjct: 17  ISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSA-FDGQDIVSVTCGADY 75

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
            +A   S  +VY+WG G  G+LGHGD  +   P  + AL+  ++K + CG     A+ + 
Sbjct: 76  TVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTM- 134

Query: 642 KGVSIADHSICSGCRNQ 658
                 ++ + S  RNQ
Sbjct: 135 ------ENKVLSWGRNQ 145


>gi|412992585|emb|CCO18565.1| predicted protein [Bathycoccus prasinos]
          Length = 1257

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 193/471 (40%), Gaps = 99/471 (21%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           D+++WG         G  +G   +       LLP + +    LD   ++ G  H V ++K
Sbjct: 409 DIYVWGN------FQGEDDGENTN-------LLPSMHKGFEHLDPIKVSAGRAHFVGISK 455

Query: 314 QGQIFSWGEGSGGKLGHGV------EADVSYPKLI----DALNGSNIHMVACGEFHTCAV 363
            G ++ WG+    + G  V      + +VS+P  +    D ++ +     ACG+ ++ A+
Sbjct: 456 GGFLYFWGDKQRFQCGDAVTTGFHDKPNVSHPMKLSFPTDDIHRTEFVDCACGDDYSLAL 515

Query: 364 TLSGDLYTWG-DGIHNLGLLGQVSEI--SHWIPRKVSGQMEGL-QISSICCGPWHTAAIT 419
           T  G++  WG  G    G  G+         I   VS +  G  ++S I CGP H AAI 
Sbjct: 516 TRDGEIKAWGATGWVEKGSTGRGGSFGSKRIISVPVSLECVGARKVSKIACGPVHCAAIC 575

Query: 420 SAGK-LFTFGDGTFGALGHGDRSST-SVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
             G+ ++T+G+G F ALGHG+ S T + P+ VE L        SCG WHT A V      
Sbjct: 576 DYGESVYTWGEGVFYALGHGNDSRTLAKPKRVEALVGKTVTAISCGAWHTVACVATNTNR 635

Query: 478 SGSNGLS---------------SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI--- 519
           +G N L+                  ++ WGDG+EGQLG    +   VP  + + +D    
Sbjct: 636 TGGNSLNLANYRSSGVDMVDAFGGDVYVWGDGSEGQLGRRVEKAIKVPTKIYIENDTPSA 695

Query: 520 ----------------------SFCKVACGHSITIALTATGQVFSMGSADYGQLG--SPG 555
                                 S  KVACG + TI L+  G VF  G     +LG  S  
Sbjct: 696 LRNASNADENLVVPERVANVSTSIIKVACGAAYTILLSINGDVFISG-----KLGKYSSK 750

Query: 556 STGKFPTRIEGNIKHRYI-EDIACGSYHIAVVSSKSEV----YTWGKGAN---------- 600
           +    P      I +  +   IA G+ H    +S + V    YT  KG            
Sbjct: 751 TFEIIPELSRSKIGNDLVVTRIAAGTDHCLFAASSTSVMPTSYTARKGDGKKREKRSAKL 810

Query: 601 --------GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKG 643
                   G++G G       P  +E L    +KS+ CG + +AAI    G
Sbjct: 811 FAIGGNKFGKIGDGTLREAAVPIEIEKLSGMSIKSLACGGSVSAAIVAESG 861



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 134/350 (38%), Gaps = 76/350 (21%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++  WG     G +     G   S   +R   +P  LE         IACG  H   + 
Sbjct: 519 GEIKAWG---ATGWVEKGSTGRGGSFGSKRIISVPVSLECVGARKVSKIACGPVHCAAIC 575

Query: 313 KQGQ-IFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHT--CAVT---- 364
             G+ +++WGEG    LGHG ++  ++ PK ++AL G  +  ++CG +HT  C  T    
Sbjct: 576 DYGESVYTWGEGVFYALGHGNDSRTLAKPKRVEALVGKTVTAISCGAWHTVACVATNTNR 635

Query: 365 ---------------------LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV------- 396
                                  GD+Y WGDG    G LG+  E +  +P K+       
Sbjct: 636 TGGNSLNLANYRSSGVDMVDAFGGDVYVWGDGSE--GQLGRRVEKAIKVPTKIYIENDTP 693

Query: 397 ------SGQMEGL-----------QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGD 439
                 S   E L            I  + CG  +T  ++  G +F  G      LG   
Sbjct: 694 SALRNASNADENLVVPERVANVSTSIIKVACGAAYTILLSINGDVFISGK-----LGKYS 748

Query: 440 RSSTSVPREVETLK---ELKTVMASCGVWH------TAAIVEVAGKTSGSNGLS----SK 486
             +  +  E+   K   +L     + G  H      + +++  +      +G      S 
Sbjct: 749 SKTFEIIPELSRSKIGNDLVVTRIAAGTDHCLFAASSTSVMPTSYTARKGDGKKREKRSA 808

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           KLF  G    G++G G      VP+ ++    +S   +ACG S++ A+ A
Sbjct: 809 KLFAIGGNKFGKIGDGTLREAAVPIEIEKLSGMSIKSLACGGSVSAAIVA 858



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 112/298 (37%), Gaps = 92/298 (30%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           V+ WGEG+   L  G          D R    PK +E+ V     +I+CG+ H V     
Sbjct: 581 VYTWGEGVFYALGHGN---------DSRTLAKPKRVEALVGKTVTAISCGAWHTVACVAT 631

Query: 315 ---------------------------GQIFSWGEGSGGKLGHGVEADVSYPKLI----- 342
                                      G ++ WG+GS G+LG  VE  +  P  I     
Sbjct: 632 NTNRTGGNSLNLANYRSSGVDMVDAFGGDVYVWGDGSEGQLGRRVEKAIKVPTKIYIEND 691

Query: 343 --DAL-NGSN-----------------IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLL 382
              AL N SN                 I  VACG  +T  ++++GD++  G        L
Sbjct: 692 TPSALRNASNADENLVVPERVANVSTSIIKVACGAAYTILLSINGDVFISGK-------L 744

Query: 383 GQVSEISHWIPRKVSGQMEG--LQISSICCGPWH---TAAITS----------------- 420
           G+ S  +  I  ++S    G  L ++ I  G  H    A+ TS                 
Sbjct: 745 GKYSSKTFEIIPELSRSKIGNDLVVTRIAAGTDHCLFAASSTSVMPTSYTARKGDGKKRE 804

Query: 421 --AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
             + KLF  G   FG +G G     +VP E+E L  +     +CG   +AAIV  +G+
Sbjct: 805 KRSAKLFAIGGNKFGKIGDGTLREAAVPIEIEKLSGMSIKSLACGGSVSAAIVAESGR 862



 Score = 42.7 bits (99), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 34/172 (19%), Positives = 58/172 (33%), Gaps = 66/172 (38%)

Query: 16  QAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWY---------------------- 53
           +A+    +G  L+KYGRRGKP    F+ SSD + L W                       
Sbjct: 46  EAMTFCVRGGVLIKYGRRGKPHGAEFKFSSDGRALEWQNIKKKTKKKKTKNDERESDFEN 105

Query: 54  ----------------------AGKEEKQLKLSHVSRIIPGQRTAVFQRYPQPEKEYQSF 91
                                  G     L+L  V ++  G+ +A+F R+P    E  SF
Sbjct: 106 EFLERNGGKGASTSKRASSFYSGGSNTSTLQLRDVVKVTKGRDSAIFDRFPNLHDEKCSF 165

Query: 92  SLIY----------------------RNRSLDLICKDKDEAELWFTALRALI 121
            + Y                      + R+L+++ +D+   + W   +   +
Sbjct: 166 FIEYVEGGGGENDVVANIKSGVAKNTKVRTLNVVAEDEQSRDKWMLGIETTL 217


>gi|330796931|ref|XP_003286517.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
 gi|325083498|gb|EGC36949.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
          Length = 815

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 111/436 (25%), Positives = 186/436 (42%), Gaps = 61/436 (13%)

Query: 236 AVSSSSQGSCHED-FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTV 294
            + S S G  H       GDV+ WG G   G LG      E      +  L+  +L   V
Sbjct: 35  VIVSCSSGEAHNICVSRFGDVYSWGRG-KEGQLGVP----EKMLFSTKPNLIKTLLHERV 89

Query: 295 VLDAQSIACGSKHAVLVTKQGQIFSWG------------EGSGGKLGHGVEADVSYPKLI 342
           V     +ACG+ H++ +T QG+++ WG            E + G L     +   Y  +I
Sbjct: 90  V----KVACGNFHSLALTDQGRVYEWGQLHKIDDSKTGLEATNGLLEMPGMSKPKYQSII 145

Query: 343 DALNGSNIHMVACGEFHTCAVTLSGD-----LYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
           +  N  + ++    E +      + D           G H    +G++ + +   P +V 
Sbjct: 146 E--NSVSQYLNGEKEIYDSTSGNNDDDDEASTSEQSKGKH----IGKIIDYNQTTPIQVQ 199

Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
           G +   ++  I  G   +AA+T +GK+FT+G    G LG   R   S P+ V+TL ++K 
Sbjct: 200 GLLANEEVIDISAGWAFSAAVTKSGKIFTWGFNEKGQLGLKHRWFNSSPQLVKTLLDVKI 259

Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS- 516
           V  SCG  H  A+ E               L+TWG G  GQLGH + +  + P  V    
Sbjct: 260 VSVSCGRQHIGAVTE------------DGDLYTWGLGVFGQLGHSNVKSYLHPKKVAAFS 307

Query: 517 -DDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-------------PT 562
            + I   +V+CG + T+ L     +++ G  +Y QLG+   T                P 
Sbjct: 308 LNGIQVSQVSCGSNFTMVLGRNQILYAFGHGEYAQLGATEETQHLDMGSRDNHFKYSSPK 367

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRD 622
            +E  ++ + I+ + CG  H   ++  +EVY WG G++G LG      +  P LV ++  
Sbjct: 368 VVEA-LEDKKIKYVTCGHLHTLALTEDNEVYVWGWGSSGCLGLNSKRFQLVPQLVTSISG 426

Query: 623 KQVKSVVCGSNFTAAI 638
           +++  +  G   +  +
Sbjct: 427 EEISCISAGEKHSLIV 442



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 178/398 (44%), Gaps = 39/398 (9%)

Query: 267 LGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGG 326
           +G   NG ++   + ++ L PKVLES       S + G  H + V++ G ++SWG G  G
Sbjct: 6   VGNNKNG-QLGIENIKEHLEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRGKEG 64

Query: 327 KLGHGVEADVSY-PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           +LG   +   S  P LI  L    +  VACG FH+ A+T  G +Y WG  +H +      
Sbjct: 65  QLGVPEKMLFSTKPNLIKTLLHERVVKVACGNFHSLALTDQGRVYEWGQ-LHKI------ 117

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG-----DGTFGALGHGDR 440
            + S       +G +E   +S     P + + I ++   +  G     D T G     D 
Sbjct: 118 -DDSKTGLEATNGLLEMPGMSK----PKYQSIIENSVSQYLNGEKEIYDSTSGNNDDDDE 172

Query: 441 SSTSVPREVETLKEL-----KTVMASCGVWHTAAIVEVAGKTSGSNGLS-SKKLFTWGDG 494
           +STS   + + + ++      T +   G+     +++++   + S  ++ S K+FTWG  
Sbjct: 173 ASTSEQSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDISAGWAFSAAVTKSGKIFTWGFN 232

Query: 495 AEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSP 554
            +GQLG         P  VK   D+    V+CG     A+T  G +++ G   +GQLG  
Sbjct: 233 EKGQLGLKHRWFNSSPQLVKTLLDVKIVSVSCGRQHIGAVTEDGDLYTWGLGVFGQLGHS 292

Query: 555 GSTGKF-PTRIEG-NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG------ 606
                  P ++   ++    +  ++CGS    V+     +Y +G G   QLG        
Sbjct: 293 NVKSYLHPKKVAAFSLNGIQVSQVSCGSNFTMVLGRNQILYAFGHGEYAQLGATEETQHL 352

Query: 607 -----DNENK-QTPTLVEALRDKQVKSVVCGSNFTAAI 638
                DN  K  +P +VEAL DK++K V CG   T A+
Sbjct: 353 DMGSRDNHFKYSSPKVVEALEDKKIKYVTCGHLHTLAL 390



 Score = 49.3 bits (116), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 1/100 (1%)

Query: 540 VFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
           V S+G+   GQLG          ++  ++K + I   + G  H   VS   +VY+WG+G 
Sbjct: 3   VISVGNNKNGQLGIENIKEHLEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRGK 62

Query: 600 NGQLGHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAAI 638
            GQLG  +     T P L++ L  ++V  V CG+  + A+
Sbjct: 63  EGQLGVPEKMLFSTKPNLIKTLLHERVVKVACGNFHSLAL 102


>gi|323452281|gb|EGB08155.1| hypothetical protein AURANDRAFT_26269, partial [Aureococcus
           anophagefferens]
          Length = 369

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 148/322 (45%), Gaps = 48/322 (14%)

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
           +  V CG  H   +T +G++YTWG G    G LG     S   PR V G + G+  + + 
Sbjct: 2   VAAVCCGGQHAAVLTAAGEVYTWGRG--GFGRLGHGDAHSLKAPRLVRGALVGVVCAQVA 59

Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALG------HGDRSSTSVPREVETL--KELKTVMAS 461
           CG  +TAA+++ G L+T+G G  G LG      HG  +    PR ++    + ++ +   
Sbjct: 60  CGFAYTAAVSAQGALYTWGAGENGRLGLGDYTGHGAAADVLTPRPLDAFGGRAVREISVG 119

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH--GDAEPR------VVPLCV 513
            G +HT A+V            S   ++TWG    GQLG+   D  PR       VP   
Sbjct: 120 PGGYHTVALV------------SPADVYTWGHNRVGQLGYTNNDVVPRNGEGAHFVPRPR 167

Query: 514 KVSDDISFCKV---ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT-------- 562
           +V D +S  +V     G   T  LTA G  +  G    GQLG  G    FP         
Sbjct: 168 RV-DSVSGLRVRRVVAGWGHTALLTAEGAAYVCGRNFQGQLGL-GDPESFPHNERGHPYQ 225

Query: 563 ---RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
              R+   +  + +  IACG  H   ++   EV++ G G  GQLGHG+ +N+Q P +V  
Sbjct: 226 PDFRLLDRLGAKRVAQIACGGEHSVALTEDGEVHSCGAGNKGQLGHGNVDNEQFPRVVSR 285

Query: 620 LR--DKQVKSVVCGSNFTAAIC 639
           L+   + V  V CG+N T  +C
Sbjct: 286 LKASRRDVLEVACGNNGTLVLC 307



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 142/310 (45%), Gaps = 42/310 (13%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI-DALNGSNIHMVACGEF 358
           ++ CG +HA ++T  G++++WG G  G+LGHG    +  P+L+  AL G     VACG  
Sbjct: 4   AVCCGGQHAAVLTAAGEVYTWGRGGFGRLGHGDAHSLKAPRLVRGALVGVVCAQVACGFA 63

Query: 359 HTCAVTLSGDLYTWGDGIHN-LGL---LGQVSEISHWIPRKVSGQMEGLQISSICCGP-- 412
           +T AV+  G LYTWG G +  LGL    G  +      PR +     G  +  I  GP  
Sbjct: 64  YTAAVSAQGALYTWGAGENGRLGLGDYTGHGAAADVLTPRPLD-AFGGRAVREISVGPGG 122

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSS----------TSVPREVETLKELKTVMASC 462
           +HT A+ S   ++T+G    G LG+ +                PR V+++  L+      
Sbjct: 123 YHTVALVSPADVYTWGHNRVGQLGYTNNDVVPRNGEGAHFVPRPRRVDSVSGLRVRRVVA 182

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE-----PRVVPLC--VKV 515
           G  HTA +             +    +  G   +GQLG GD E      R  P     ++
Sbjct: 183 GWGHTALLT------------AEGAAYVCGRNFQGQLGLGDPESFPHNERGHPYQPDFRL 230

Query: 516 SDDIS---FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIK--H 570
            D +      ++ACG   ++ALT  G+V S G+ + GQLG      +   R+   +K   
Sbjct: 231 LDRLGAKRVAQIACGGEHSVALTEDGEVHSCGAGNKGQLGHGNVDNEQFPRVVSRLKASR 290

Query: 571 RYIEDIACGS 580
           R + ++ACG+
Sbjct: 291 RDVLEVACGN 300


>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
 gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
          Length = 985

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 157/329 (47%), Gaps = 27/329 (8%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           SI+CG  +++ +   G ++ WG+ + G+LG G   D +    +  L+G  +  +ACG  H
Sbjct: 329 SISCGFYYSMALKNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGLDG--VIAIACGVNH 386

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           + A+   G ++TWG   +  G LG  +++S      +SG ++G  I +I CG  H+ A+ 
Sbjct: 387 SMALRNDGTVWTWG--FNAFGQLGDGTKVSKNTAVPISG-LDG--IIAITCGTSHSMALK 441

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G ++ +GD  +G LG+G   S + P +V  L  +K++   CG   + A+     K  G
Sbjct: 442 DDGTVWAWGDNQYGQLGNGTFISNTTPSQVSNLSGIKSIF--CGYSTSFAL-----KPDG 494

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
           +       ++ WG+   G+LG G     + P       DI    +   H   +AL   G 
Sbjct: 495 T-------VWAWGNNEYGELGKGFTTRVIYPTETLNIGDIKAISIGSSHC--LALKNDGT 545

Query: 540 VFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           V++ G   YGQLG   +T K  P ++ G      I  I+ G  H   + S   V+ WG+ 
Sbjct: 546 VWAWGDNRYGQLGDGTTTIKSLPVQVSG---ISGITAISAGGSHSLALKSDGTVWAWGQN 602

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKS 627
             GQLG G  E++ TP  V  L    V S
Sbjct: 603 NVGQLGDGTKEDRNTPVQVSELSGITVIS 631



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 193/473 (40%), Gaps = 87/473 (18%)

Query: 213 SGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVN 272
           SG L D  + S    S    LS  VS S            G V++WG+   +G LG    
Sbjct: 304 SGQLGDGTTNSKYIPSQVQGLSGIVSISCGFYYSMALKNDGTVWVWGDNT-SGQLGDG-- 360

Query: 273 GVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV 332
               ++ DR  A+    L+  +     +IACG  H++ +   G +++WG  + G+LG G 
Sbjct: 361 ----TTTDRNTAVPVSGLDGVI-----AIACGVNHSMALRNDGTVWTWGFNAFGQLGDGT 411

Query: 333 EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI 392
           +   +    I  L+G  I  + CG  H+ A+   G ++ WGD  +  G LG  + IS+  
Sbjct: 412 KVSKNTAVPISGLDG--IIAITCGTSHSMALKDDGTVWAWGD--NQYGQLGNGTFISNTT 467

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
           P +VS  + G  I SI CG   + A+   G ++ +G+  +G LG G  +    P E   +
Sbjct: 468 PSQVS-NLSG--IKSIFCGYSTSFALKPDGTVWAWGNNEYGELGKGFTTRVIYPTETLNI 524

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC 512
            ++K +  S G  H  A+     K  G+       ++ WGD   GQLG G    + +P  
Sbjct: 525 GDIKAI--SIGSSHCLAL-----KNDGT-------VWAWGDNRYGQLGDGTTTIKSLP-- 568

Query: 513 VKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS------------------- 553
           V+VS       ++ G S ++AL + G V++ G  + GQLG                    
Sbjct: 569 VQVSGISGITAISAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSGIT 628

Query: 554 ----------------------------PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAV 585
                                       P      P +I G      I  I CG+YH   
Sbjct: 629 VISNCIYRSFALKNDGTVWVWGSDSYNLPLEKMTMPIQISG---LSGIIAIECGTYHNLA 685

Query: 586 VSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + +   V+ WGK   GQ G G       P  V  L    VK++  G N + A+
Sbjct: 686 LKNDGTVWAWGKNNFGQFGDGTTTTTNIPVQVSGL--SGVKAIAVGGNRSIAL 736



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 167/342 (48%), Gaps = 35/342 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++ G  H + +   G +++ GE   G+LG+    D++ P  ++ LN   +  ++ G++++
Sbjct: 180 VSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGLN--KVSSISAGKYYS 237

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+   G ++TWG+  ++ G LG  +  +   P +V   + G  I +I  G  H+ A+  
Sbjct: 238 MALKSDGTVWTWGE--NDYGQLGDGTTATRLSPVQVQ-NLSG--IIAISSGNSHSLALKD 292

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            G ++ +GD   G LG G  +S  +P +V+ L  + ++  SCG +++ A+     K  G+
Sbjct: 293 DGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLSGIVSI--SCGFYYSMAL-----KNDGT 345

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
                  ++ WGD   GQLG G    R   + V   D +    +ACG + ++AL   G V
Sbjct: 346 -------VWVWGDNTSGQLGDGTTTDRNTAVPVSGLDGV--IAIACGVNHSMALRNDGTV 396

Query: 541 FSMGSADYGQLGSPGSTGK---FP-TRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           ++ G   +GQLG      K    P + ++G I       I CG+ H   +     V+ WG
Sbjct: 397 WTWGFNAFGQLGDGTKVSKNTAVPISGLDGIIA------ITCGTSHSMALKDDGTVWAWG 450

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               GQLG+G   +  TP+ V  L    +KS+ CG + + A+
Sbjct: 451 DNQYGQLGNGTFISNTTPSQVSNL--SGIKSIFCGYSTSFAL 490



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 122/241 (50%), Gaps = 23/241 (9%)

Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV 458
           ++EG  I  +  G  HT A+ S G ++  G+  +G LG+ +    + P  VE L ++ ++
Sbjct: 172 KIEG-PIIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGLNKVSSI 230

Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
             S G +++ A+     K+ G+       ++TWG+   GQLG G    R+ P  V+V + 
Sbjct: 231 --SAGKYYSMAL-----KSDGT-------VWTWGENDYGQLGDGTTATRLSP--VQVQNL 274

Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIA 577
                ++ G+S ++AL   G V++ G  + GQLG   +  K+ P++++G      I  I+
Sbjct: 275 SGIIAISSGNSHSLALKDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQG---LSGIVSIS 331

Query: 578 CGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           CG Y+   + +   V+ WG   +GQLG G   ++ T   V  L    V ++ CG N + A
Sbjct: 332 CGFYYSMALKNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGL--DGVIAIACGVNHSMA 389

Query: 638 I 638
           +
Sbjct: 390 L 390



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 132/285 (46%), Gaps = 44/285 (15%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           +I+ G  H++ +   G +++WG+ + G+LG G + D + P  +  L+G  I +++   + 
Sbjct: 579 AISAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSG--ITVISNCIYR 636

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           + A+   G ++ WG   +NL L          +P ++SG + G  I +I CG +H  A+ 
Sbjct: 637 SFALKNDGTVWVWGSDSYNLPLEKMT------MPIQISG-LSG--IIAIECGTYHNLALK 687

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM-------------------- 459
           + G ++ +G   FG  G G  ++T++P +V  L  +K +                     
Sbjct: 688 NDGTVWAWGKNNFGQFGDGTTTTTNIPVQVSGLSGVKAIAVGGNRSIALKSDGTVWQWGR 747

Query: 460 -------ASCGVWHTAAIVE-VAGKTSGSNGLSSK---KLFTWGDGAEGQLGHGDAEPRV 508
                  ++   W TA  V+ ++   S SN ++ K   K+FTWG    GQLG G    RV
Sbjct: 748 ILVSVSPSTVETWTTARQVDGLSEIVSISNNVALKNDGKVFTWGANDYGQLGDGTTTARV 807

Query: 509 VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS 553
                 VS       VA   + ++ L   G + + G  ++GQLG+
Sbjct: 808 T--VAPVSGLEGVAGVASSDTTSMVLMNDGTIRAWGKNNFGQLGN 850



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 97/379 (25%), Positives = 165/379 (43%), Gaps = 55/379 (14%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           +SI CG   +  +   G +++WG    G+LG G    V YP   + LN  +I  ++ G  
Sbjct: 478 KSIFCGYSTSFALKPDGTVWAWGNNEYGELGKGFTTRVIYPT--ETLNIGDIKAISIGSS 535

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
           H  A+   G ++ WGD  +  G LG  +     +P +VSG + G  I++I  G  H+ A+
Sbjct: 536 HCLALKNDGTVWAWGD--NRYGQLGDGTTTIKSLPVQVSG-ISG--ITAISAGGSHSLAL 590

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI-----VEV 473
            S G ++ +G    G LG G +   + P +V  L  + TV+++C ++ + A+     V V
Sbjct: 591 KSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSGI-TVISNC-IYRSFALKNDGTVWV 648

Query: 474 AG---------------KTSGSNGL--------------SSKKLFTWGDGAEGQLGHGDA 504
            G               + SG +G+              +   ++ WG    GQ G G  
Sbjct: 649 WGSDSYNLPLEKMTMPIQISGLSGIIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGTT 708

Query: 505 EPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRI 564
               +P  V+VS       +A G + +IAL + G V+  G        S   T     ++
Sbjct: 709 TTTNIP--VQVSGLSGVKAIAVGGNRSIALKSDGTVWQWGRILVSVSPSTVETWTTARQV 766

Query: 565 EGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ 624
           +G      + +I   S ++A+  +  +V+TWG    GQLG G    + T   V  L    
Sbjct: 767 DG------LSEIVSISNNVAL-KNDGKVFTWGANDYGQLGDGTTTARVTVAPVSGLEG-- 817

Query: 625 VKSVVCGSNFTAAICLHKG 643
             + V  S+ T+ + ++ G
Sbjct: 818 -VAGVASSDTTSMVLMNDG 835


>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
           boliviensis]
          Length = 1024

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 122/224 (54%), Gaps = 17/224 (7%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFH 359
           I CG  H++ ++K G++F+WG+   G+LG G +    + P++++ L+G  +  ++ GE H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISAGEAH 202

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           + A+++SG++Y+WG   +  G LG     S   P  +   ++  ++  + CG  HTA +T
Sbjct: 203 SMALSMSGNIYSWGK--NEFGQLGLDHTESKDSPSLIEA-LDNQKVEFLACGGSHTALLT 259

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G LFTFG G  G LGH    +   P  V  L   +    +CG WHT A V   G    
Sbjct: 260 QDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSDLG---- 315

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS--DDISF 521
                  K+F++G G EGQLG+G    +++PL +KVS  +D+ F
Sbjct: 316 -------KVFSFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDLKF 352



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 141/323 (43%), Gaps = 40/323 (12%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           PK ++    +   S+  G+ H ++++  G+ F +   S   L           +    L 
Sbjct: 88  PKCIKLGKNMKIHSMDLGADHMLILSSGGKPFEYDNYSMKHL-----------RFESILQ 136

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
              I  + CG++H+ A++  G+L+ WG  +H  G LG   +       ++   + G+ ++
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRKFPSTTTPQIVEHLSGIPLA 194

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            I  G  H+ A++ +G ++++G   FG LG     S   P  +E L   K    +CG  H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSH 254

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           TA + +        +GL    LFT+G G  GQLGH   +  + P  V         ++AC
Sbjct: 255 TALLTQ--------DGL----LFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIAC 302

Query: 527 GHSITIALTA-TGQVFSMGSADYGQLGSPGSTGK---FPTRIEGNIKHRYIEDIACGSYH 582
           G   T+A  +  G+VFS GS   GQLG+ G+  +    P ++  N      ED+   S+ 
Sbjct: 303 GRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPMKVSSN------EDLKFESHT 356

Query: 583 -----IAVVSSKSEVYTWGKGAN 600
                I +      +  W K  N
Sbjct: 357 SEKELIMIAGENQSILLWIKKEN 379



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 116/239 (48%), Gaps = 26/239 (10%)

Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
           + ++I S+  G  H   ++S GK F +           D  S    R    L+E K +  
Sbjct: 95  KNMKIHSMDLGADHMLILSSGGKPFEY-----------DNYSMKHLRFESILQEKKIIQI 143

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP-RVVPLCVKVSDDI 519
           +CG +H+ A+         S G    +LF WG    GQLG G   P    P  V+    I
Sbjct: 144 TCGDYHSLAL---------SKG---GELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGI 191

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIAC 578
              +++ G + ++AL+ +G ++S G  ++GQLG   +  K  P+ IE  + ++ +E +AC
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEA-LDNQKVEFLAC 250

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           G  H A+++    ++T+G G +GQLGH   +N+  P LV  L   +V  + CG   T A
Sbjct: 251 GGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLA 309



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 112/225 (49%), Gaps = 14/225 (6%)

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASC 462
           +I  I CG +H+ A++  G+LF +G    G LG G +  ST+ P+ VE L  +     S 
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISA 198

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
           G  H+ A+       SG+       +++WG    GQLG    E +  P  ++  D+    
Sbjct: 199 GEAHSMAL-----SMSGN-------IYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVE 246

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
            +ACG S T  LT  G +F+ G+  +GQLG   +  +    +   +    +  IACG +H
Sbjct: 247 FLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWH 306

Query: 583 -IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVK 626
            +A VS   +V+++G G  GQLG+G   ++  P  ++   ++ +K
Sbjct: 307 TLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDLK 351



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 102/195 (52%), Gaps = 13/195 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++F WG+ L +G LG    G +  S        P+++E    +    I+ G  H++ ++
Sbjct: 157 GELFAWGQNL-HGQLGV---GRKFPSTTT-----PQIVEHLSGIPLAQISAGEAHSMALS 207

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G I+SWG+   G+LG         P LI+AL+   +  +ACG  HT  +T  G L+T+
Sbjct: 208 MSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQDGLLFTF 267

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G H  G LG  S  +   P  V+ ++ G +++ I CG WHT A ++  GK+F+FG G 
Sbjct: 268 GAGKH--GQLGHNSTQNELRPCLVA-ELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324

Query: 432 FGALGHGDRSSTSVP 446
            G LG+G      +P
Sbjct: 325 EGQLGNGGTRDQLIP 339



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 7/120 (5%)

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY----IEDIAC 578
           ++ CG   ++AL+  G++F+ G   +GQLG      KFP+     I        +  I+ 
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGV---GRKFPSTTTPQIVEHLSGIPLAQISA 198

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G  H   +S    +Y+WGK   GQLG    E+K +P+L+EAL +++V+ + CG + TA +
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALL 258


>gi|6755348|ref|NP_035415.1| X-linked retinitis pigmentosa GTPase regulator isoform 3 [Mus
           musculus]
 gi|3258647|gb|AAC40190.1| retinitis pigmentosa GTPase regulator [Mus musculus]
          Length = 746

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 167/354 (47%), Gaps = 59/354 (16%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H  +VT   +++ +G  + G+LG G +A +  P  I AL    + + ACG  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137

Query: 361 CAVTLSGDLYTWGDGIHNLGLLG--------QVSEISHWIPRKVSGQMEGLQISSICCGP 412
              T +G +Y  G   +N G LG           +I  + P           I  +  G 
Sbjct: 138 LVSTDTGGVYAAGG--NNEGQLGLGDTDDRDTFHQIVFFTPADT--------IKQLSAGA 187

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
             +AA+T  GKLF +GD + G +G  D+S+  +P EV   K +  +  SCG +H +A V 
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYH-SAFVT 244

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-------AEPRVVPLCVKVSDDISFCKVA 525
           + G           +L+T+G+   G+LG  +       +  RV+ +  +V       +VA
Sbjct: 245 MDG-----------ELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERV------IQVA 287

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACG 579
           CG   T+ LT    V++ G   +GQLG     G F      P  IE  IK + I  I+CG
Sbjct: 288 CGGGHTVVLTEK-VVYAFGLGQFGQLG----LGTFLFETSEPKIIE-RIKDQKICHISCG 341

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
             H A+++    +YT+G G +G+LG G  +  N+  PTL        V+ + CG
Sbjct: 342 ENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 143/297 (48%), Gaps = 33/297 (11%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDALNGSNIHMVACGEFHT 360
           ACG  H ++ T  G +++ G  + G+LG G   D  ++ +++       I  ++ G   +
Sbjct: 131 ACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTS 190

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T  G L+ WGD  ++ G +G   + +  IP +V+    G  IS I CG +H+A +T 
Sbjct: 191 AALTEDGKLFMWGD--NSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTM 245

Query: 421 AGKLFTFGDGTFGALGHGDR--SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
            G+L+TFG+   G LG  +    +   P+ V  + E + +  +CG  HT  + E      
Sbjct: 246 DGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTE------ 298

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHG-----DAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
                  K ++ +G G  GQLG G      +EP++    ++   D   C ++CG + T  
Sbjct: 299 -------KVVYAFGLGQFGQLGLGTFLFETSEPKI----IERIKDQKICHISCGENHTAL 347

Query: 534 LTATGQVFSMGSADYGQ--LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
           +T  G +++ G   +G+  LG    T +F   +  N     ++ IACG  H+ V ++
Sbjct: 348 MTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFAT 404



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 120/264 (45%), Gaps = 35/264 (13%)

Query: 215 GLDDANSRSS--------TADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGL 266
           GL D + R +         AD+ +  LS+  ++S+  +  ED    G +F+WG+      
Sbjct: 158 GLGDTDDRDTFHQIVFFTPADTIK-QLSAGANTSA--ALTED----GKLFMWGDN----- 205

Query: 267 LGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGG 326
                +  +I   D+ +  +P   E TV      I+CG  H+  VT  G+++++GE   G
Sbjct: 206 -----SEGQIGLEDKSNVCIPH--EVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENG 258

Query: 327 KLGHGVEADVSY--PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQ 384
           KLG   E  +++  P+ +  +    I  VACG  HT  +T   +   +  G+   G LG 
Sbjct: 259 KLGLPNELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVLT---EKVVYAFGLGQFGQLGL 314

Query: 385 VSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS 444
            + +      K+  +++  +I  I CG  HTA +T  G L+TFGDG  G LG G  + T+
Sbjct: 315 GTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTN 374

Query: 445 --VPREVETLKELKTVMASCGVWH 466
              P            + +CG  H
Sbjct: 375 QFFPTLCSNFLRFAVQLIACGGCH 398



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 11/129 (8%)

Query: 507 RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEG 566
           RV P        I F       S ++ +  TG VF+ G   + +          P++   
Sbjct: 20  RVAPAIFPKQAQIPFAGFGMAESESL-VPDTGAVFTFGKTKFAE--------NIPSKFW- 69

Query: 567 NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVK 626
             K+     ++CG  H A+V+  +++Y +G    GQLG G       PT ++AL+ ++VK
Sbjct: 70  -FKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVK 128

Query: 627 SVVCGSNFT 635
              CG N T
Sbjct: 129 LAACGRNHT 137


>gi|386720863|ref|YP_006187188.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
 gi|384087987|gb|AFH59423.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
          Length = 1164

 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/328 (29%), Positives = 149/328 (45%), Gaps = 28/328 (8%)

Query: 306 KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTL 365
            H + +   G ++ WG    G+LG G     S P  +  L G  + M+A GE HT A+  
Sbjct: 639 NHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTG--MKMIAGGENHTVALRS 696

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
            G L+TWG   +  G LG  S  + + P +VS        +++  G  H+ A+ S G ++
Sbjct: 697 DGTLHTWG--YNGYGQLGDDSTTTRYSPVQVSTLT---NWTAVSAGENHSLALKSDGTVW 751

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            FG   +G LG G  SS   P +V+ L              T  +   AGK       S 
Sbjct: 752 AFGYNGYGQLGDGTTSSQRTPVQVKDL--------------TGVVAIAAGKDFSLALKSD 797

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
             +++WG    G+LG+G      VP+ V +  D+    +A G    +AL   G VF+ G 
Sbjct: 798 GTVWSWGQNTYGELGNGTTTRSSVPVQVALLTDVK--AIAAGDYHGVALKKDGSVFAWGY 855

Query: 546 ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
              G+LG+  ST    T ++  +    I+ IA G YH   + S   V++WG    GQLG+
Sbjct: 856 NGNGELGN-SSTISQSTPVQSGVTG--IKGIAAGPYHTLALKSDGTVWSWGYNGYGQLGN 912

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSN 633
           G+N ++  P  +  L    + S+  G N
Sbjct: 913 GNNTSRSVPAAIPGL--ASIASIAAGEN 938



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 125/258 (48%), Gaps = 34/258 (13%)

Query: 254 DVFIWGEGL-GNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           D  +W  G  G G LG      + +++ +R  +  K L   V     +IA G   ++ + 
Sbjct: 747 DGTVWAFGYNGYGQLG------DGTTSSQRTPVQVKDLTGVV-----AIAAGKDFSLALK 795

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G ++SWG+ + G+LG+G     S P  +  L  +++  +A G++H  A+   G ++ W
Sbjct: 796 SDGTVWSWGQNTYGELGNGTTTRSSVPVQVALL--TDVKAIAAGDYHGVALKKDGSVFAW 853

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           G   +  G LG  S IS   P  V   + G++   I  GP+HT A+ S G ++++G   +
Sbjct: 854 G--YNGNGELGNSSTISQSTP--VQSGVTGIK--GIAAGPYHTLALKSDGTVWSWGYNGY 907

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           G LG+G+ +S SVP  +  L  + ++ A           E      G++G+    L++WG
Sbjct: 908 GQLGNGNNTSRSVPAAIPGLASIASIAAG----------ENQSIAYGNDGI----LYSWG 953

Query: 493 DGAEGQLGHGDAEPRVVP 510
             A GQLG+G      VP
Sbjct: 954 RNANGQLGNGTTVDTNVP 971



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 28/201 (13%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           G V+ WG+     LGNG           SS   + ALL          D ++IA G  H 
Sbjct: 798 GTVWSWGQNTYGELGNGT-------TTRSSVPVQVALL---------TDVKAIAAGDYHG 841

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           V + K G +F+WG    G+LG+      S P +   + G  I  +A G +HT A+   G 
Sbjct: 842 VALKKDGSVFAWGYNGNGELGNSSTISQSTP-VQSGVTG--IKGIAAGPYHTLALKSDGT 898

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +++WG   +  G LG  +  S  +P  + G      I+SI  G   + A  + G L+++G
Sbjct: 899 VWSWG--YNGYGQLGNGNNTSRSVPAAIPGLAS---IASIAAGENQSIAYGNDGILYSWG 953

Query: 429 DGTFGALGHGDRSSTSVPREV 449
               G LG+G    T+VP +V
Sbjct: 954 RNANGQLGNGTTVDTNVPHKV 974



 Score = 56.2 bits (134), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 8/156 (5%)

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
           S   ++ WG    GQLG G +    VP   KV +      +A G + T+AL + G + + 
Sbjct: 646 SDGTVWGWGYNGHGQLGTGTSNSTSVPG--KVINLTGMKMIAGGENHTVALRSDGTLHTW 703

Query: 544 GSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
           G   YGQLG   +T ++ P ++           ++ G  H   + S   V+ +G    GQ
Sbjct: 704 GYNGYGQLGDDSTTTRYSPVQVS---TLTNWTAVSAGENHSLALKSDGTVWAFGYNGYGQ 760

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           LG G   +++TP  V+ L    V ++  G +F+ A+
Sbjct: 761 LGDGTTSSQRTPVQVKDLTG--VVAIAAGKDFSLAL 794


>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 569

 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 158/338 (46%), Gaps = 39/338 (11%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
           LPK  E T      + A G  H++ VT  G + +WG  + G+LG G   + S P  +   
Sbjct: 92  LPKGTEVT------AAAGGDAHSLAVTSAGTVLAWGRNAVGQLGDGTTINRSTPVDVRLP 145

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
            G+ +  VA G  H+ A+T +G ++ WGD  ++ G LG  +  +   P  VS    G  I
Sbjct: 146 PGTTVTAVAAGFNHSLALTSAGTVFAWGD--NSTGQLGDGTRTNRSTPVAVS-FPSGTVI 202

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE-TLKELKTVMASCGV 464
           +++  G  H+ A+TSAG +F +GD + G LG G R++ S P  V   +  + T +A  G 
Sbjct: 203 TAVAAGGMHSLALTSAGTVFAWGDNSTGQLGDGTRTNRSTPVVVGLPVGTIVTAIAGGGS 262

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
            H+ A+             S+     WG+   GQLG G    R   + V++    +   V
Sbjct: 263 -HSLAVT------------SAGNARAWGNNFVGQLGDGSNINRDASVHVRLPPGTTVTAV 309

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLG--------SPGSTGKFPTRIEGNIKHRYIEDI 576
           A G + ++ALT+ G V S GS ++GQLG        +PGS    P  +        I  +
Sbjct: 310 AGGLTHSLALTSVGTVLSWGSNNWGQLGDGTARDRNTPGSV-SLPPGVT-------ITAV 361

Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
           A G      ++S   V  WG    GQLG G    ++TP
Sbjct: 362 AAGDLFGLALTSAGTVLAWGGNIVGQLGDGTTTVRRTP 399



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 141/317 (44%), Gaps = 26/317 (8%)

Query: 237 VSSSSQGSCHE-DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVV 295
           V++++ G  H       G V  WG     G LG   +G  I+ +   D  LP     T  
Sbjct: 98  VTAAAGGDAHSLAVTSAGTVLAWGRN-AVGQLG---DGTTINRSTPVDVRLPPGTTVT-- 151

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
               ++A G  H++ +T  G +F+WG+ S G+LG G   + S P  +   +G+ I  VA 
Sbjct: 152 ----AVAAGFNHSLALTSAGTVFAWGDNSTGQLGDGTRTNRSTPVAVSFPSGTVITAVAA 207

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
           G  H+ A+T +G ++ WGD  ++ G LG  +  +   P  V G   G  +++I  G  H+
Sbjct: 208 GGMHSLALTSAGTVFAWGD--NSTGQLGDGTRTNRSTP-VVVGLPVGTIVTAIAGGGSHS 264

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            A+TSAG    +G+   G LG G   +      V           + G+ H+ A+  V  
Sbjct: 265 LAVTSAGNARAWGNNFVGQLGDGSNINRDASVHVRLPPGTTVTAVAGGLTHSLALTSVG- 323

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
                       + +WG    GQLG G A  R  P  V +   ++   VA G    +ALT
Sbjct: 324 -----------TVLSWGSNNWGQLGDGTARDRNTPGSVSLPPGVTITAVAAGDLFGLALT 372

Query: 536 ATGQVFSMGSADYGQLG 552
           + G V + G    GQLG
Sbjct: 373 SAGTVLAWGGNIVGQLG 389



 Score = 94.0 bits (232), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 113/272 (41%), Gaps = 16/272 (5%)

Query: 369 LYTWGDGIHNLGLLGQVSEISH-WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           +  WGD  +  G LG  +  ++  +P  V G  +G ++++   G  H+ A+TSAG +  +
Sbjct: 64  VLAWGDNYY--GQLGDGTTNNYRTVPIPV-GLPKGTEVTAAAGGDAHSLAVTSAGTVLAW 120

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           G    G LG G   + S P +V           + G  H+ A+             S+  
Sbjct: 121 GRNAVGQLGDGTTINRSTPVDVRLPPGTTVTAVAAGFNHSLALT------------SAGT 168

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           +F WGD + GQLG G    R  P+ V          VA G   ++ALT+ G VF+ G   
Sbjct: 169 VFAWGDNSTGQLGDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNS 228

Query: 548 YGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
            GQLG    T +    + G      +  IA G  H   V+S      WG    GQLG G 
Sbjct: 229 TGQLGDGTRTNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQLGDGS 288

Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
           N N+     V       V +V  G   + A+ 
Sbjct: 289 NINRDASVHVRLPPGTTVTAVAGGLTHSLALT 320


>gi|156398544|ref|XP_001638248.1| predicted protein [Nematostella vectensis]
 gi|156225367|gb|EDO46185.1| predicted protein [Nematostella vectensis]
          Length = 676

 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 162/388 (41%), Gaps = 92/388 (23%)

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPK-LIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           Q  ++ WG G            ++YP  L    + S +  V+CG      VT +G +  W
Sbjct: 315 QHMVYHWGGG------------ITYPNPLPLPQHDSGVVQVSCGRTLMTGVTANGRMILW 362

Query: 373 GDGIHNLGLL--GQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +G  + GL+  G  +E + W+PR + GQ  G+ I+ + CG   TA +T  G L TFG G
Sbjct: 363 -EGSKSSGLMSSGGKNEKTVWVPRFLEGQ-SGITITKVSCGDLFTACLTDRGILMTFGSG 420

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
           T+G LGHG  +  S  + VE L   +    SCG  H  A+             +  ++F 
Sbjct: 421 TYGCLGHGTTNYVSQAKIVEDLLGFEVEDISCGSSHIMAVT------------ADHEVFA 468

Query: 491 WGDGAEGQLGHGDAE----PRVVPL--------------------------------CVK 514
           WG G  G+LG G  +    P+ + L                                C K
Sbjct: 469 WGRGDNGRLGTGSQQEYWSPKAISLPEGMRARSVHCGVDCSFAITLENKLLACGSNRCNK 528

Query: 515 VSDD----------------------ISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
           ++ D                      +    VA G S T+ L   G+++S GS  +GQLG
Sbjct: 529 LALDNEDGPVEEVAVLRQVSVPDFNSVGTSSVAMGTSHTLVLLQNGKLYSFGSNSFGQLG 588

Query: 553 SPGS-TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
                  +FP  +E      Y+   ACG      VSS SEV+ WGKGA G+LG+  +E+ 
Sbjct: 589 YVREGVSRFPQLVESLNDVSYV---ACGDTFSVAVSSDSEVFVWGKGARGRLGNKADEDV 645

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAIC 639
           + P  +      QV SV C SN    +C
Sbjct: 646 REPVCLSLPAAVQVLSVSC-SNSGTLLC 672



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 120/250 (48%), Gaps = 21/250 (8%)

Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
           K++E  +  + + I+CGS H + VT   ++F+WG G  G+LG G + +   PK I    G
Sbjct: 437 KIVEDLLGFEVEDISCGSSHIMAVTADHEVFAWGRGDNGRLGTGSQQEYWSPKAISLPEG 496

Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLL----GQVSEISHWIPRKVS-GQMEG 402
                V CG   + A+TL   L   G    N   L    G V E++  + R+VS      
Sbjct: 497 MRARSVHCGVDCSFAITLENKLLACGSNRCNKLALDNEDGPVEEVA--VLRQVSVPDFNS 554

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
           +  SS+  G  HT  +   GKL++FG  +FG LG+     +  P+ VE+L ++  V  +C
Sbjct: 555 VGTSSVAMGTSHTLVLLQNGKLYSFGSNSFGQLGYVREGVSRFPQLVESLNDVSYV--AC 612

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
           G   + A+             S  ++F WG GA G+LG+   E    P+C+ +   +   
Sbjct: 613 GDTFSVAVS------------SDSEVFVWGKGARGRLGNKADEDVREPVCLSLPAAVQVL 660

Query: 523 KVACGHSITI 532
            V+C +S T+
Sbjct: 661 SVSCSNSGTL 670



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 135/280 (48%), Gaps = 23/280 (8%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
           + +   +P+ LE    +    ++CG      +T +G + ++G G+ G LGHG    VS  
Sbjct: 377 NEKTVWVPRFLEGQSGITITKVSCGDLFTACLTDRGILMTFGSGTYGCLGHGTTNYVSQA 436

Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ 399
           K+++ L G  +  ++CG  H  AVT   +++ WG G  + G LG  S+  +W P+ +S  
Sbjct: 437 KIVEDLLGFEVEDISCGSSHIMAVTADHEVFAWGRG--DNGRLGTGSQQEYWSPKAIS-L 493

Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG----HGDRSSTSVPREVET--LK 453
            EG++  S+ CG   + AIT   KL   G      L      G     +V R+V      
Sbjct: 494 PEGMRARSVHCGVDCSFAITLENKLLACGSNRCNKLALDNEDGPVEEVAVLRQVSVPDFN 553

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            + T   + G  HT  +++        NG    KL+++G  + GQLG+        P  V
Sbjct: 554 SVGTSSVAMGTSHTLVLLQ--------NG----KLYSFGSNSFGQLGYVREGVSRFPQLV 601

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS 553
           +  +D+S+  VACG + ++A+++  +VF  G    G+LG+
Sbjct: 602 ESLNDVSY--VACGDTFSVAVSSDSEVFVWGKGARGRLGN 639



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 4/180 (2%)

Query: 466 HTAAIVEVA-GKTSGSNGLSSKKLFTW-GDGAEGQLGHGDAEPRVV--PLCVKVSDDISF 521
           H + +V+V+ G+T  +   ++ ++  W G  + G +  G    + V  P  ++    I+ 
Sbjct: 336 HDSGVVQVSCGRTLMTGVTANGRMILWEGSKSSGLMSSGGKNEKTVWVPRFLEGQSGITI 395

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
            KV+CG   T  LT  G + + GS  YG LG   +      +I  ++    +EDI+CGS 
Sbjct: 396 TKVSCGDLFTACLTDRGILMTFGSGTYGCLGHGTTNYVSQAKIVEDLLGFEVEDISCGSS 455

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
           HI  V++  EV+ WG+G NG+LG G  +   +P  +      + +SV CG + + AI L 
Sbjct: 456 HIMAVTADHEVFAWGRGDNGRLGTGSQQEYWSPKAISLPEGMRARSVHCGVDCSFAITLE 515



 Score = 43.5 bits (101), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 2/70 (2%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
            P+++ES  + D   +ACG   +V V+   ++F WG+G+ G+LG+  + DV  P  +   
Sbjct: 597 FPQLVES--LNDVSYVACGDTFSVAVSSDSEVFVWGKGARGRLGNKADEDVREPVCLSLP 654

Query: 346 NGSNIHMVAC 355
               +  V+C
Sbjct: 655 AAVQVLSVSC 664


>gi|440904419|gb|ELR54939.1| Putative E3 ubiquitin-protein ligase HERC6, partial [Bos grunniens
           mutus]
          Length = 1019

 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 171/355 (48%), Gaps = 44/355 (12%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G  H++L+   G + S G+ S G+LG         P+ I AL   ++ +V+CG+ H+ 
Sbjct: 29  ASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERIPALETLHVALVSCGKEHSL 88

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV   G ++ WG        +G+  E + +IP+K+   + G++I  + CG +H+ A++  
Sbjct: 89  AVCHKGRVFAWGAASEGQLGIGEFKETT-FIPKKIK-TLAGIKIIQVACGHYHSVALSED 146

Query: 422 GKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           G++F++G  + G LG G +  S + P+ V +L+ +     + G  H+ A+       SG+
Sbjct: 147 GQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGHHSFAL-----SLSGT 201

Query: 481 NGLSSKKLFTWGDGAEGQLG-HGDAEP--RVVPLCVKVSDDISFCKVACGHSITIALTAT 537
           +       F WG    GQL   G+  P  R  P+ +     +    ++CG+  T  LT  
Sbjct: 202 S-------FGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVLTQD 254

Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPT---RIEGNIKHRYIEDIACGSYH-IAVVSSKSEV 592
           G+VF+ G   YGQLG  P +  + P    RIEG      +  I CGS H +A + +  +V
Sbjct: 255 GKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEG-----LVSQIDCGSDHTLAYIYTTGQV 309

Query: 593 YTWGKGAN--------GQLGHGDNENKQTPTLVEA--LRDKQVKSVVCGS--NFT 635
            ++G+G          G L     E+     LV A  L D QVK +  G+  NF 
Sbjct: 310 VSFGRGPGCASRSPHPGALA----ESSDISCLVSAKDLADVQVKHIFAGTYANFV 360



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/258 (31%), Positives = 128/258 (49%), Gaps = 18/258 (6%)

Query: 222 RSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADR 281
           R    ++  ++L S     S   CH+     G VF WG     G LG            +
Sbjct: 68  RIPALETLHVALVSCGKEHSLAVCHK-----GRVFAWGAA-SEGQLG--------IGEFK 113

Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPK 340
               +PK +++   +    +ACG  H+V +++ GQ+FSWG  S G+LG G E    + P+
Sbjct: 114 ETTFIPKKIKTLAGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQ 173

Query: 341 LIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQ 399
            + +L G  +  VA G  H+ A++LSG  + WG +    L L G  + +  + P  + G 
Sbjct: 174 RVRSLEGIPLAQVAAGGHHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSI-GA 232

Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
           ++ L + SI CG  HTA +T  GK+FTFGD ++G LGH   +    P+ VE ++ L + +
Sbjct: 233 LKTLGVVSISCGYKHTAVLTQDGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVSQI 292

Query: 460 ASCGVWHTAAIVEVAGKT 477
             CG  HT A +   G+ 
Sbjct: 293 -DCGSDHTLAYIYTTGQV 309



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 134/265 (50%), Gaps = 24/265 (9%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDAL 345
           P+ + +   L    ++CG +H++ V  +G++F+WG  S G+LG G   + ++ PK I  L
Sbjct: 66  PERIPALETLHVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGIGEFKETTFIPKKIKTL 125

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGLQ 404
            G  I  VACG +H+ A++  G +++WG   H  G LG   E  S   P++V   +EG+ 
Sbjct: 126 AGIKIIQVACGHYHSVALSEDGQVFSWGTNSH--GQLGLGKEFPSQASPQRVRS-LEGIP 182

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGAL---GHGDRSSTSVPREVETLKELKTVMAS 461
           ++ +  G  H+ A++ +G  F +G    G L   G+        P  +  LK L  V  S
Sbjct: 183 LAQVAAGGHHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVSIGALKTLGVVSIS 242

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDIS 520
           CG  HTA + +              K+FT+GD + GQLGH   AE R   L  ++   +S
Sbjct: 243 CGYKHTAVLTQ------------DGKVFTFGDNSYGQLGHDPTAEKRGPQLVERIEGLVS 290

Query: 521 FCKVACGHSITIA-LTATGQVFSMG 544
             ++ CG   T+A +  TGQV S G
Sbjct: 291 --QIDCGSDHTLAYIYTTGQVVSFG 313


>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
          Length = 4167

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/320 (31%), Positives = 148/320 (46%), Gaps = 31/320 (9%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV-EADVSYPKLIDALNGSNIHMVAC-- 355
           + IA G++   +V K G +F+ G    G+ G+G  E  V     + AL+G  I+MVA   
Sbjct: 505 RDIAGGNEVLAVVMKDGAVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAAN 564

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH-WIPRKVSGQMEGLQISSICCGPWH 414
           G  H  AV   G +Y+WG   ++ G LG  S IS    PR +    E   I++      H
Sbjct: 565 GCEHMLAVASDGAVYSWG--YNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHH 622

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           +A ++S G+L  FG    G LG         P+ V++L        +CG++HT AI    
Sbjct: 623 SAVVSSNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAI---- 678

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS---DDISFCKVACGHSIT 531
             TSG       +++++G    GQLG G A    VP  VK S    D     V+CG+  T
Sbjct: 679 --TSGG------EVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHT 730

Query: 532 IALTATGQVFSMGSADYGQLG-----SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
           + ++  G++ + G  DYGQLG        S    P  +   IK       +CG YH  ++
Sbjct: 731 VTISEKGKLITWGRNDYGQLGIGSKDHKNSAQYVPLPLSSKIK-----TASCGCYHTLIL 785

Query: 587 SSKSEVYTWGKGANGQLGHG 606
            S   V  +G+   GQLG G
Sbjct: 786 MSNGRVMVFGRNNKGQLGAG 805



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 147/312 (47%), Gaps = 32/312 (10%)

Query: 292 STVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDALNGS-N 349
           S +V++  + A G +H + V   G ++SWG    G+LG G     S+ P++ID+L    +
Sbjct: 553 SGIVINMVAAANGCEHMLAVASDGAVYSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYH 612

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
           I   A    H+  V+ +G+L  +  G+++ G LG +    H    ++   +    I+ + 
Sbjct: 613 ITTAAVSYHHSAVVSSNGELLMF--GMNDCGQLG-LDHTQHQHTPQLVDSLSSQVITEVA 669

Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET---LKELKTVMASCGVWH 466
           CG +HT AITS G++++FG   +G LG G   +  VP  V+T     + K V  SCG +H
Sbjct: 670 CGLYHTIAITSGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYH 729

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFC 522
           T  I E              KL TWG    GQLG G  +     + VPL   +S  I   
Sbjct: 730 TVTISE------------KGKLITWGRNDYGQLGIGSKDHKNSAQYVPL--PLSSKIKTA 775

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGST---GKFPTRIEGN-IKHRYIEDIAC 578
              C H  T+ L + G+V   G  + GQLG+   T      P  +  N + +  +  IA 
Sbjct: 776 SCGCYH--TLILMSNGRVMVFGRNNKGQLGAGSRTLPSADLPLPVPSNSLANDEVVRIAA 833

Query: 579 GSYHIAVVSSKS 590
           G Y   +++ +S
Sbjct: 834 GFYSSYILTGRS 845



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 156/348 (44%), Gaps = 26/348 (7%)

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           ++FS G+ + G+L  G     S  + +   +   I  +A G      V   G ++T G  
Sbjct: 470 ELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKAIRDIAGGNEVLAVVMKDGAVFTCG-- 527

Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC--GPWHTAAITSAGKLFTFGDGTFG 433
           ++  G  G  +     I       + G+ I+ +    G  H  A+ S G ++++G    G
Sbjct: 528 LNKSGQCGNGTFEERVIIATPVRALSGIVINMVAAANGCEHMLAVASDGAVYSWGYNDRG 587

Query: 434 ALGHGDRSSTS-VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            LG G   S S  PR +++L+E   +  +   +H +A+V        SNG    +L  +G
Sbjct: 588 QLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVS-------SNG----ELLMFG 636

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
               GQLG    + +  P  V         +VACG   TIA+T+ G+V+S G  DYGQLG
Sbjct: 637 MNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLG 696

Query: 553 -SPGSTGKFPTRIEGNI--KHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
                  K PT ++ ++      I  ++CG YH   +S K ++ TWG+   GQLG G  +
Sbjct: 697 LGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKD 756

Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRN 657
           +K +   V      ++K+  CG       C H  + +++  +    RN
Sbjct: 757 HKNSAQYVPLPLSSKIKTASCG-------CYHTLILMSNGRVMVFGRN 797



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 101/207 (48%), Gaps = 18/207 (8%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P++++S        +ACG  H + +T  G+++S+G+   G+LG G   ++  P L+    
Sbjct: 654 PQLVDSLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSL 713

Query: 347 GSN---IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE----ISHWIPRKVSGQ 399
           G +   I  V+CG +HT  ++  G L TWG   ++ G LG  S+     + ++P  +S  
Sbjct: 714 GESDEKIVAVSCGYYHTVTISEKGKLITWGR--NDYGQLGIGSKDHKNSAQYVPLPLSS- 770

Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS----VPREVETLKEL 455
               +I +  CG +HT  + S G++  FG    G LG G R+  S    +P    +L   
Sbjct: 771 ----KIKTASCGCYHTLILMSNGRVMVFGRNNKGQLGAGSRTLPSADLPLPVPSNSLAND 826

Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNG 482
           + V  + G + +  +   +G+  G +G
Sbjct: 827 EVVRIAAGFYSSYILTGRSGEGCGLDG 853


>gi|403263469|ref|XP_003924054.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 988

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 167/347 (48%), Gaps = 35/347 (10%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDA 344
           LP+ +++   L    ++CG +H++ V  +G++F+WG GS G+LG G   ++++ P+ I  
Sbjct: 65  LPEPVQALKTLKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITT 124

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGL 403
           LNG  I  V+CG +H+ A++    +++WG   H  G LG   E  S   P++V   +EG+
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQPSPQRVRS-LEGI 181

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGAL---GHGDRSSTSVPREVETLKELKTVMA 460
            ++ +  G  H+ A++  G  F +G  + G L   G   +  ++ P  +  LK L  +  
Sbjct: 182 PLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYI 241

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
           SCG  HTA + +              K+FT+GD + GQLG+     +  P  V+  D + 
Sbjct: 242 SCGDEHTAVLSQ------------DGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGL- 288

Query: 521 FCKVACGHSITIALT-ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
             ++ CG   TIA    TGQV S G         P +T K PT  E  +K  +  DI C 
Sbjct: 289 VSQIDCGGDHTIAYVHTTGQVVSFGRG-------PSATSK-PTHPEA-LKENF--DIRCL 337

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP--TLVEALRDKQ 624
                +V  + +    GK AN    H D  +   P  TL E  R  Q
Sbjct: 338 ISADDLVDVQVKHIFAGKYANFVTTHQDTSSTSAPRKTLPEISRITQ 384



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 168/351 (47%), Gaps = 36/351 (10%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G +HA+L+     + S GE S G+LG         P+ + AL      +V+CG+ H+ 
Sbjct: 29  ASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLVSCGKEHSL 88

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV   G ++ WG G      +G++ EI+ + PRK++  + G++I  + CG +H+ A++  
Sbjct: 89  AVCHKGRVFAWGAGSEGQLGVGELKEIN-FTPRKIT-TLNGIKIIQVSCGHYHSLALSKD 146

Query: 422 GKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            ++F++G  + G LG G +  S   P+ V +L+ +     + G  H+ A+  + G +   
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFAL-SLCGTS--- 202

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVV---PLCVKVSDDISFCKVACGHSITIALTAT 537
                   F WG  + GQL       +V    PL +    ++    ++CG   T  L+  
Sbjct: 203 --------FGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQD 254

Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPT---RIEGNIKHRYIEDIACGSYH-IAVVSSKSEV 592
           G+VF+ G    GQLG SP    + P    RI+G      +  I CG  H IA V +  +V
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGGDHTIAYVHTTGQV 309

Query: 593 YTWGKG--ANGQLGHGD--NENKQTPTLVEA--LRDKQVKSVVCG--SNFT 635
            ++G+G  A  +  H +   EN     L+ A  L D QVK +  G  +NF 
Sbjct: 310 VSFGRGPSATSKPTHPEALKENFDIRCLISADDLVDVQVKHIFAGKYANFV 360



 Score = 39.3 bits (90), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 2/93 (2%)

Query: 555 GSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
           GS G    R EG+     ++  A G  H  ++ + S V++ G+ + GQLG         P
Sbjct: 8   GSRGLQRRRTEGSPGAELLQ-AASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLP 66

Query: 615 TLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             V+AL+  +   V CG   + A+C HKG   A
Sbjct: 67  EPVQALKTLKFDLVSCGKEHSLAVC-HKGRVFA 98


>gi|147820281|emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
          Length = 511

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 156/356 (43%), Gaps = 35/356 (9%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGEFH 359
           ++    HA  V + G++F+ G+ S    GHG     +  P+L++AL G     VA G   
Sbjct: 168 VSASHNHAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSF 227

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAI 418
           T  +T+ G +YT G   H  G LG    +    P+ V   +EG+  +  I  GP +  A+
Sbjct: 228 TVFLTMKGHVYTCGTNTH--GQLGHGDTVDRRTPKIVE-LLEGVGPVVQIAAGPSYAMAV 284

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL--KELKTVMASCGVWHTAAIVEVAGK 476
           T  G + +FG G+   LGHG++ +   PR +++   K +  V  S G  H  A+      
Sbjct: 285 TDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALD----- 339

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
                  SS  ++TWG G  G LGHGD   +  P  +         +V      T  L  
Sbjct: 340 -------SSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVD 392

Query: 537 TGQVFSMGSADYGQLGSP--GSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
           TG V+  G   +G LG P  G++ K     I  +++  YI  I+ G YH   V +K +++
Sbjct: 393 TGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVAVXNKGQIF 452

Query: 594 TWGKGANGQLGHGD-------NENKQTPTLVEALRD------KQVKSVVCGSNFTA 636
            +G     QLGH          E   +PT+ E  RD      +Q     C S   A
Sbjct: 453 GFGDNERAQLGHDTLRGCPVPTEIFASPTVAEMERDLRAGFPRQRSDTTCASKLKA 508



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 119/273 (43%), Gaps = 19/273 (6%)

Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
           +  G +HT  +  S  +Y+ G  +   G+LG   E +  +            ++ +    
Sbjct: 116 ITTGRYHTLLIKDS-SVYSCGSSL--CGVLGHGPETTQCVAFSRINFPPLAHVAQVSASH 172

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIV 471
            H A +  +G++FT GD +    GHGD       PR VE LK +     + G+  T  + 
Sbjct: 173 NHAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLT 232

Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS-FCKVACGHSI 530
                           ++T G    GQLGHGD   R  P  V++ + +    ++A G S 
Sbjct: 233 ------------MKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSY 280

Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIE--DIACGSYHIAVVSS 588
            +A+T  G V S GS     LG      +   R   + + + I    I+ G  H+  + S
Sbjct: 281 AMAVTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDS 340

Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEALR 621
              VYTWGKG  G LGHGD  +K TP ++ +L+
Sbjct: 341 SGFVYTWGKGYCGALGHGDEIDKTTPEILSSLK 373



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 131/287 (45%), Gaps = 16/287 (5%)

Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL 341
           R    P+++E+   +  + +A G    V +T +G +++ G  + G+LGHG   D   PK+
Sbjct: 202 RPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKI 261

Query: 342 IDALNGSN-IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV-SGQ 399
           ++ L G   +  +A G  +  AVT  G ++++G G +    LG   + +   PR + S +
Sbjct: 262 VELLEGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNF--CLGHGEQHNELRPRAIQSFR 319

Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
            + + +  I  G  H  A+ S+G ++T+G G  GALGHGD    + P  + +LK    V 
Sbjct: 320 RKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQ 379

Query: 460 ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW-GDGAEGQLGHGDAEPRVVPLCVKVSDD 518
                  T  +V+  G   G         F W G G+ G    G ++  + P  +     
Sbjct: 380 VCARKRKTFVLVD-TGSVYG---------FGWMGFGSLGFPDRGASDKVMRPWILDSLRG 429

Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRI 564
               +++ G   T+A+   GQ+F  G  +  QLG     G   PT I
Sbjct: 430 HYISQISTGLYHTVAVXNKGQIFGFGDNERAQLGHDTLRGCPVPTEI 476



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 108/238 (45%), Gaps = 22/238 (9%)

Query: 278 SADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS 337
           + DRR   + ++LE   V     IA G  +A+ VT  G + S+G GS   LGHG + +  
Sbjct: 253 TVDRRTPKIVELLEG--VGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNFCLGHGEQHNEL 310

Query: 338 YPKLIDALNGSNIHMV--ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRK 395
            P+ I +     IH+V  + G+ H  A+  SG +YTWG G    G LG   EI    P  
Sbjct: 311 RPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGY--CGALGHGDEIDKTTPEI 368

Query: 396 VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV---PREVETL 452
           +S     L +  +C     T  +   G ++ FG   FG+LG  DR ++     P  +++L
Sbjct: 369 LSSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSL 427

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
           +       S G++HT A+             +  ++F +GD    QLGH       VP
Sbjct: 428 RGHYISQISTGLYHTVAVX------------NKGQIFGFGDNERAQLGHDTLRGCPVP 473



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 108/250 (43%), Gaps = 26/250 (10%)

Query: 384 QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           Q  E S +I    +G M+      I  G +HT  I  +  +++ G    G LGHG  ++ 
Sbjct: 98  QSVEQSSYISETSAGNMQ------ITTGRYHTLLIKDS-SVYSCGSSLCGVLGHGPETTQ 150

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
            V         L  V       + AA V           + S ++FT GD +    GHGD
Sbjct: 151 CVAFSRINFPPLAHVAQVSASHNHAAFV-----------MQSGEVFTCGDNSSFCCGHGD 199

Query: 504 -AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGS----TG 558
              P   P  V+    +   +VA G S T+ LT  G V++ G+  +GQLG   +    T 
Sbjct: 200 TVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTP 259

Query: 559 KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
           K    +EG      +  IA G  +   V+    V+++G G+N  LGHG+  N+  P  ++
Sbjct: 260 KIVELLEGVGP---VVQIAAGPSYAMAVTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQ 316

Query: 619 ALRDKQVKSV 628
           + R K +  V
Sbjct: 317 SFRRKTIHVV 326



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 10/180 (5%)

Query: 276 ISSADRRDALLPKVLES--TVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
           +   ++ + L P+ ++S     +    I+ G +H V +   G +++WG+G  G LGHG E
Sbjct: 301 LGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDE 360

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSE---IS 389
            D + P+++ +L       V   +  T  +  +G +Y +G  G  +LG   + +    + 
Sbjct: 361 IDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMR 420

Query: 390 HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV 449
            WI   + G      IS I  G +HT A+ + G++F FGD     LGH       VP E+
Sbjct: 421 PWILDSLRGHY----ISQISTGLYHTVAVXNKGQIFGFGDNERAQLGHDTLRGCPVPTEI 476



 Score = 50.4 bits (119), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 64/169 (37%), Gaps = 13/169 (7%)

Query: 209 NFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLG 268
           NF    G      R     SFR      V  S+        D  G V+ WG+G    L  
Sbjct: 298 NFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGH 357

Query: 269 GAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKL 328
           G          D  D   P++L S     A  +    +   ++   G ++ +G    G L
Sbjct: 358 G----------DEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407

Query: 329 G---HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           G    G    V  P ++D+L G  I  ++ G +HT AV   G ++ +GD
Sbjct: 408 GFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVAVXNKGQIFGFGD 456


>gi|403263467|ref|XP_003924053.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1024

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 167/347 (48%), Gaps = 35/347 (10%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDA 344
           LP+ +++   L    ++CG +H++ V  +G++F+WG GS G+LG G   ++++ P+ I  
Sbjct: 65  LPEPVQALKTLKFDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGVGELKEINFTPRKITT 124

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGL 403
           LNG  I  V+CG +H+ A++    +++WG   H  G LG   E  S   P++V   +EG+
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQPSPQRVRS-LEGI 181

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGAL---GHGDRSSTSVPREVETLKELKTVMA 460
            ++ +  G  H+ A++  G  F +G  + G L   G   +  ++ P  +  LK L  +  
Sbjct: 182 PLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYI 241

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
           SCG  HTA + +              K+FT+GD + GQLG+     +  P  V+  D + 
Sbjct: 242 SCGDEHTAVLSQ------------DGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDGL- 288

Query: 521 FCKVACGHSITIALT-ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
             ++ CG   TIA    TGQV S G         P +T K PT  E  +K  +  DI C 
Sbjct: 289 VSQIDCGGDHTIAYVHTTGQVVSFGRG-------PSATSK-PTHPEA-LKENF--DIRCL 337

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP--TLVEALRDKQ 624
                +V  + +    GK AN    H D  +   P  TL E  R  Q
Sbjct: 338 ISADDLVDVQVKHIFAGKYANFVTTHQDTSSTSAPRKTLPEISRITQ 384



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 168/351 (47%), Gaps = 36/351 (10%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G +HA+L+     + S GE S G+LG         P+ + AL      +V+CG+ H+ 
Sbjct: 29  ASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLPEPVQALKTLKFDLVSCGKEHSL 88

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV   G ++ WG G      +G++ EI+ + PRK++  + G++I  + CG +H+ A++  
Sbjct: 89  AVCHKGRVFAWGAGSEGQLGVGELKEIN-FTPRKIT-TLNGIKIIQVSCGHYHSLALSKD 146

Query: 422 GKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            ++F++G  + G LG G +  S   P+ V +L+ +     + G  H+ A+  + G +   
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQPSPQRVRSLEGIPLAQVAAGGAHSFAL-SLCGTS--- 202

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVV---PLCVKVSDDISFCKVACGHSITIALTAT 537
                   F WG  + GQL       +V    PL +    ++    ++CG   T  L+  
Sbjct: 203 --------FGWGSNSAGQLALSGRNVQVQSNKPLSIGALKNLGVIYISCGDEHTAVLSQD 254

Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPT---RIEGNIKHRYIEDIACGSYH-IAVVSSKSEV 592
           G+VF+ G    GQLG SP    + P    RI+G      +  I CG  H IA V +  +V
Sbjct: 255 GKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGGDHTIAYVHTTGQV 309

Query: 593 YTWGKG--ANGQLGHGD--NENKQTPTLVEA--LRDKQVKSVVCG--SNFT 635
            ++G+G  A  +  H +   EN     L+ A  L D QVK +  G  +NF 
Sbjct: 310 VSFGRGPSATSKPTHPEALKENFDIRCLISADDLVDVQVKHIFAGKYANFV 360



 Score = 39.3 bits (90), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 2/93 (2%)

Query: 555 GSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
           GS G    R EG+     ++  A G  H  ++ + S V++ G+ + GQLG         P
Sbjct: 8   GSRGLQRRRTEGSPGAELLQ-AASGERHALLLLTNSLVHSCGENSRGQLGRRGAPRWDLP 66

Query: 615 TLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
             V+AL+  +   V CG   + A+C HKG   A
Sbjct: 67  EPVQALKTLKFDLVSCGKEHSLAVC-HKGRVFA 98


>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
           [Pan troglodytes]
          Length = 1020

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 164/347 (47%), Gaps = 35/347 (10%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDA 344
           LP+ +++   L    ++CG +H++ V  +G++F+WG GS G+LG G   ++S+ PK I  
Sbjct: 65  LPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGL 403
           LNG  I  V+CG +H+ A++    +++WG   H  G LG   E  S   P++V   +EG+
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQASPQRVRS-LEGI 181

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS---STSVPREVETLKELKTVMA 460
            ++ +  G  H+ A++  G  F +G  + G L    R+    ++ P  V  LK L  V  
Sbjct: 182 PLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYI 241

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
           SCG  HTA + +              K+FT+GD   GQLG+     +  P  V+  D + 
Sbjct: 242 SCGDAHTAVLTQ------------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL- 288

Query: 521 FCKVACGHSITIALT-ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
             ++ CG   T+A    TGQV S G         P  T K PT  E   ++    DI+C 
Sbjct: 289 VSQIDCGSYHTLAYVHTTGQVVSFGHG-------PSDTSK-PTHSEALTENF---DISCL 337

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP--TLVEALRDKQ 624
                +V    +    G  AN    H D  + + P  TL E  R  Q
Sbjct: 338 ISAEDLVDVHVKHIFAGTYANFVTTHQDTSSTRAPGKTLPEISRISQ 384



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 170/351 (48%), Gaps = 36/351 (10%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G +H++L+    ++ S G+ S G+LG         P+ I AL    + +V+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSL 88

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV   G ++ WG G      +G+  EIS + P+K++  + G++I  + CG +H+ A++  
Sbjct: 89  AVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIT-TLNGIKIIQVSCGHYHSLALSKD 146

Query: 422 GKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            ++F++G  + G LG G +  S + P+ V +L+ +     + G  H+ A+  + G +   
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-SLCGTS--- 202

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVV---PLCVKVSDDISFCKVACGHSITIALTAT 537
                   F WG  + GQL        V    PL V    ++    ++CG + T  LT  
Sbjct: 203 --------FGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQD 254

Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPT---RIEGNIKHRYIEDIACGSYH-IAVVSSKSEV 592
           G+VF+ G    GQLG SP    + P    RI+G      +  I CGSYH +A V +  +V
Sbjct: 255 GKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQV 309

Query: 593 YTWGKGAN--GQLGHGD--NENKQTPTLVEA--LRDKQVKSVVCGS--NFT 635
            ++G G +   +  H +   EN     L+ A  L D  VK +  G+  NF 
Sbjct: 310 VSFGHGPSDTSKPTHSEALTENFDISCLISAEDLVDVHVKHIFAGTYANFV 360



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 117/257 (45%), Gaps = 27/257 (10%)

Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
           + R+ +    G ++     G  H+  + +  ++ + GD + G LG        +P  ++ 
Sbjct: 12  LQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA 71

Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVP 510
           L+ L   + SCG  H+ A+                ++F WG G+EGQLG G+  E    P
Sbjct: 72  LETLTVDLVSCGKEHSLAVCH------------KGRVFAWGAGSEGQLGIGEFKEISFTP 119

Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIK 569
             +   + I   +V+CGH  ++AL+   QVFS G   +GQLG     GK FP++     +
Sbjct: 120 KKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG----LGKEFPSQASPQ-R 174

Query: 570 HRYIEDI-----ACGSYHIAVVSSKSEVYTWGKGANGQLG-HGDNENKQT--PTLVEALR 621
            R +E I     A G  H   +S     + WG  ++GQL   G N   Q+  P  V AL+
Sbjct: 175 VRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALK 234

Query: 622 DKQVKSVVCGSNFTAAI 638
           +  V  + CG   TA +
Sbjct: 235 NLGVVYISCGDAHTAVL 251


>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
          Length = 1020

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 164/347 (47%), Gaps = 35/347 (10%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDA 344
           LP+ +++   L    ++CG +H++ V  +G++F+WG GS G+LG G   ++S+ PK I  
Sbjct: 65  LPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGL 403
           LNG  I  V+CG +H+ A++    +++WG   H  G LG   E  S   P++V   +EG+
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQASPQRVRS-LEGI 181

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS---STSVPREVETLKELKTVMA 460
            ++ +  G  H+ A++  G  F +G  + G L    R+    ++ P  V  LK L  V  
Sbjct: 182 PLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYI 241

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
           SCG  HTA + +              K+FT+GD   GQLG+     +  P  V+  D + 
Sbjct: 242 SCGDAHTAVLTQ------------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL- 288

Query: 521 FCKVACGHSITIALT-ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
             ++ CG   T+A    TGQV S G         P  T K PT  E   ++    DI+C 
Sbjct: 289 VSQIDCGSYHTLAYVHTTGQVVSFGHG-------PSDTSK-PTHSEALTENF---DISCL 337

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP--TLVEALRDKQ 624
                +V    +    G  AN    H D  + + P  TL E  R  Q
Sbjct: 338 ISAEDLVDVHVKHIFAGTYANFVTTHQDTSSTRAPGKTLPEISRISQ 384



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 170/351 (48%), Gaps = 36/351 (10%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G +H++L+    ++ S G+ S G+LG         P+ I AL    + +V+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSL 88

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV   G ++ WG G      +G+  EIS + P+K++  + G++I  + CG +H+ A++  
Sbjct: 89  AVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIT-TLNGIKIIQVSCGHYHSLALSKD 146

Query: 422 GKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            ++F++G  + G LG G +  S + P+ V +L+ +     + G  H+ A+  + G +   
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-SLCGTS--- 202

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVV---PLCVKVSDDISFCKVACGHSITIALTAT 537
                   F WG  + GQL        V    PL V    ++    ++CG + T  LT  
Sbjct: 203 --------FGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQD 254

Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPT---RIEGNIKHRYIEDIACGSYH-IAVVSSKSEV 592
           G+VF+ G    GQLG SP    + P    RI+G      +  I CGSYH +A V +  +V
Sbjct: 255 GKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQV 309

Query: 593 YTWGKGAN--GQLGHGD--NENKQTPTLVEA--LRDKQVKSVVCGS--NFT 635
            ++G G +   +  H +   EN     L+ A  L D  VK +  G+  NF 
Sbjct: 310 VSFGHGPSDTSKPTHSEALTENFDISCLISAEDLVDVHVKHIFAGTYANFV 360



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 117/257 (45%), Gaps = 27/257 (10%)

Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
           + R+ +    G ++     G  H+  + +  ++ + GD + G LG        +P  ++ 
Sbjct: 12  LQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA 71

Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVP 510
           L+ L   + SCG  H+ A+                ++F WG G+EGQLG G+  E    P
Sbjct: 72  LETLTVDLVSCGKEHSLAVCH------------KGRVFAWGAGSEGQLGIGEFKEISFTP 119

Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIK 569
             +   + I   +V+CGH  ++AL+   QVFS G   +GQLG     GK FP++     +
Sbjct: 120 KKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG----LGKEFPSQASPQ-R 174

Query: 570 HRYIEDI-----ACGSYHIAVVSSKSEVYTWGKGANGQLG-HGDNENKQT--PTLVEALR 621
            R +E I     A G  H   +S     + WG  ++GQL   G N   Q+  P  V AL+
Sbjct: 175 VRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALK 234

Query: 622 DKQVKSVVCGSNFTAAI 638
           +  V  + CG   TA +
Sbjct: 235 NLGVVYISCGDAHTAVL 251


>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
           [Pan troglodytes]
          Length = 984

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 164/347 (47%), Gaps = 35/347 (10%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDA 344
           LP+ +++   L    ++CG +H++ V  +G++F+WG GS G+LG G   ++S+ PK I  
Sbjct: 65  LPEPIQALETLTVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGL 403
           LNG  I  V+CG +H+ A++    +++WG   H  G LG   E  S   P++V   +EG+
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQASPQRVRS-LEGI 181

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS---STSVPREVETLKELKTVMA 460
            ++ +  G  H+ A++  G  F +G  + G L    R+    ++ P  V  LK L  V  
Sbjct: 182 PLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYI 241

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
           SCG  HTA + +              K+FT+GD   GQLG+     +  P  V+  D + 
Sbjct: 242 SCGDAHTAVLTQ------------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL- 288

Query: 521 FCKVACGHSITIALT-ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
             ++ CG   T+A    TGQV S G         P  T K PT  E   ++    DI+C 
Sbjct: 289 VSQIDCGSYHTLAYVHTTGQVVSFGHG-------PSDTSK-PTHSEALTENF---DISCL 337

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP--TLVEALRDKQ 624
                +V    +    G  AN    H D  + + P  TL E  R  Q
Sbjct: 338 ISAEDLVDVHVKHIFAGTYANFVTTHQDTSSTRAPGKTLPEISRISQ 384



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 170/351 (48%), Gaps = 36/351 (10%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G +H++L+    ++ S G+ S G+LG         P+ I AL    + +V+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLTVDLVSCGKEHSL 88

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV   G ++ WG G      +G+  EIS + P+K++  + G++I  + CG +H+ A++  
Sbjct: 89  AVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIT-TLNGIKIIQVSCGHYHSLALSKD 146

Query: 422 GKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            ++F++G  + G LG G +  S + P+ V +L+ +     + G  H+ A+  + G +   
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-SLCGTS--- 202

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVV---PLCVKVSDDISFCKVACGHSITIALTAT 537
                   F WG  + GQL        V    PL V    ++    ++CG + T  LT  
Sbjct: 203 --------FGWGSNSSGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQD 254

Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPT---RIEGNIKHRYIEDIACGSYH-IAVVSSKSEV 592
           G+VF+ G    GQLG SP    + P    RI+G      +  I CGSYH +A V +  +V
Sbjct: 255 GKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQV 309

Query: 593 YTWGKGAN--GQLGHGD--NENKQTPTLVEA--LRDKQVKSVVCGS--NFT 635
            ++G G +   +  H +   EN     L+ A  L D  VK +  G+  NF 
Sbjct: 310 VSFGHGPSDTSKPTHSEALTENFDISCLISAEDLVDVHVKHIFAGTYANFV 360



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 117/257 (45%), Gaps = 27/257 (10%)

Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
           + R+ +    G ++     G  H+  + +  ++ + GD + G LG        +P  ++ 
Sbjct: 12  LQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA 71

Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVP 510
           L+ L   + SCG  H+ A+                ++F WG G+EGQLG G+  E    P
Sbjct: 72  LETLTVDLVSCGKEHSLAVCH------------KGRVFAWGAGSEGQLGIGEFKEISFTP 119

Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIK 569
             +   + I   +V+CGH  ++AL+   QVFS G   +GQLG     GK FP++     +
Sbjct: 120 KKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG----LGKEFPSQASPQ-R 174

Query: 570 HRYIEDI-----ACGSYHIAVVSSKSEVYTWGKGANGQLG-HGDNENKQT--PTLVEALR 621
            R +E I     A G  H   +S     + WG  ++GQL   G N   Q+  P  V AL+
Sbjct: 175 VRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVGALK 234

Query: 622 DKQVKSVVCGSNFTAAI 638
           +  V  + CG   TA +
Sbjct: 235 NLGVVYISCGDAHTAVL 251


>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
          Length = 1699

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 139/290 (47%), Gaps = 20/290 (6%)

Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLGH-GVEADVSYPKLIDALNGSNIHMVACGEFHTCA 362
           G +H + +T  G  +SWG    G+LGH  +   +  PKLI++L    +   +    H+  
Sbjct: 424 GCEHMIALTDTGLAYSWGYNDRGQLGHENLATKIHVPKLIESLKDKKLGFASVSYHHSAV 483

Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
           +T +G+LYT+G  +++ G LG +    H    ++   +E  ++S + CG +HT   T+AG
Sbjct: 484 ITDAGELYTFG--MNDCGQLG-LDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAG 540

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           +LFT G   +G LG        +P  V    E+ + +A CG +H+  +V   G+      
Sbjct: 541 ELFTCGKNDYGQLGLAHNRQIKLPTLVALPNEMVSFVA-CGYYHSV-VVSTGGRA----- 593

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
                 F++G    GQLG G    + VP  V +S +    +  CG   T+ L+  GQV+ 
Sbjct: 594 ------FSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQGQVYV 647

Query: 543 MGSADYGQLGSPGSTGKF---PTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
            G  + GQLG+ GS       P ++      R   D+A G Y  +++  +
Sbjct: 648 FGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLIVER 697



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 159/338 (47%), Gaps = 22/338 (6%)

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVAC 355
           D + +  G++   ++T +G + + G    G+ G G  +  V   + + AL    +  +A 
Sbjct: 362 DIRQVVSGNETLAVLTNEGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAA 421

Query: 356 --GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
             G  H  A+T +G  Y+WG   ++ G LG  +  +     K+   ++  ++        
Sbjct: 422 SNGCEHMIALTDTGLAYSWG--YNDRGQLGHENLATKIHVPKLIESLKDKKLGFASVSYH 479

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           H+A IT AG+L+TFG    G LG       S P+ V++L+  +  M +CG++HT  I   
Sbjct: 480 HSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTI-ICTA 538

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD-ISFCKVACGHSITI 532
           AG+           LFT G    GQLG        +P  V + ++ +SF  VACG+  ++
Sbjct: 539 AGE-----------LFTCGKNDYGQLGLAHNRQIKLPTLVALPNEMVSF--VACGYYHSV 585

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            ++  G+ FS G  DYGQLG      +  P  +  +   R +    CG YH  ++S + +
Sbjct: 586 VVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVR-ATCGCYHTVLLSEQGQ 644

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVV 629
           VY +G+   GQLG+  + +   P  ++   +K  +  V
Sbjct: 645 VYVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCV 682



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 147/328 (44%), Gaps = 20/328 (6%)

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           G+++S G+ S G+LG G + +      +      +I  V  G      +T  G + T G 
Sbjct: 328 GELYSCGQNSYGELGTGDDIERHQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLTCG- 386

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC--GPWHTAAITSAGKLFTFGDGTF 432
            ++  G  GQ       +  +    +   ++  I    G  H  A+T  G  +++G    
Sbjct: 387 -LNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDR 445

Query: 433 GALGHGDRSS-TSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           G LGH + ++   VP+ +E+LK+ K   AS    H+A I +              +L+T+
Sbjct: 446 GQLGHENLATKIHVPKLIESLKDKKLGFASVSYHHSAVITDAG------------ELYTF 493

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           G    GQLG    + +  P  VK  +      VACG   TI  TA G++F+ G  DYGQL
Sbjct: 494 GMNDCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICTAAGELFTCGKNDYGQL 553

Query: 552 G-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
           G +     K PT +   + +  +  +ACG YH  VVS+    +++G+   GQLG G   +
Sbjct: 554 GLAHNRQIKLPTLVA--LPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVH 611

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  P +V    + ++    CG   T  +
Sbjct: 612 QNVPNVVALSSNTRMVRATCGCYHTVLL 639



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 116/230 (50%), Gaps = 16/230 (6%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
           +PK++ES         +    H+ ++T  G+++++G    G+LG       S P+L+ +L
Sbjct: 459 VPKLIESLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSL 518

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
             + + MVACG +HT   T +G+L+T G   ++ G LG        +P  V+   E   +
Sbjct: 519 EATEVSMVACGLYHTIICTAAGELFTCGK--NDYGQLGLAHNRQIKLPTLVALPNE--MV 574

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
           S + CG +H+  +++ G+ F+FG   +G LG G +   +VP  V      + V A+CG +
Sbjct: 575 SFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCY 634

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
           HT  + E              +++ +G   +GQLG+  +   ++P+ +KV
Sbjct: 635 HTVLLSE------------QGQVYVFGRNNKGQLGNRGSADALLPVPLKV 672



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 132/291 (45%), Gaps = 35/291 (12%)

Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
           A GE ++C     G+L T GD I       Q++ +S      + G  +   I  +  G  
Sbjct: 326 ASGELYSCGQNSYGELGT-GDDIER----HQLTSVS------LCGWDD---IRQVVSGNE 371

Query: 414 HTAAITSAGKLFTFGDGTFGALGHG---DRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
             A +T+ G + T G    G  G G   +R     P +    + +K + AS G  H  A+
Sbjct: 372 TLAVLTNEGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIAL 431

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDD--ISFCKVACG 527
            +         GL+    ++WG    GQLGH +   ++ VP  ++   D  + F  V+  
Sbjct: 432 TD--------TGLA----YSWGYNDRGQLGHENLATKIHVPKLIESLKDKKLGFASVSYH 479

Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
           HS  I  T  G++++ G  D GQLG   +  +   ++  +++   +  +ACG YH  + +
Sbjct: 480 HSAVI--TDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICT 537

Query: 588 SKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  E++T GK   GQLG   N   + PTLV AL ++ V  V CG   +  +
Sbjct: 538 AAGELFTCGKNDYGQLGLAHNRQIKLPTLV-ALPNEMVSFVACGYYHSVVV 587


>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
          Length = 1024

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 121/224 (54%), Gaps = 17/224 (7%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFH 359
           I CG  H++ ++K G++F+WG+   G+LG G +    + P++++ L G  +  ++ GE H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISAGEAH 202

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           + A+++SG++Y+WG   +  G LG     S   P  +   ++  ++  + CG  HTA +T
Sbjct: 203 SMALSMSGNIYSWGK--NEFGQLGLDHTESKDSPSLIEA-LDNQKVEFLACGGSHTALLT 259

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G LFTFG G  G LGH    +   P  V  L   +    +CG WHT A V   G    
Sbjct: 260 QDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLAYVSDLG---- 315

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS--DDISF 521
                  K+F++G G EGQLG+G    +++PL +KVS  +D+ F
Sbjct: 316 -------KVFSFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDLKF 352



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 141/323 (43%), Gaps = 40/323 (12%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           PK ++    +   S+  G+ H ++++  G+ F +   S   L           +    L 
Sbjct: 88  PKCIKLGKNMKIHSMDLGADHMLILSSDGKPFEYDNYSMKHL-----------RFESILQ 136

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
              I  + CG++H+ A++  G+L+ WG  +H  G LG   +       ++   + G+ ++
Sbjct: 137 EKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRKFPSTTAPQIVEHLAGIPLA 194

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            I  G  H+ A++ +G ++++G   FG LG     S   P  +E L   K    +CG  H
Sbjct: 195 QISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSH 254

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           TA + +        +GL    LFT+G G  GQLGH   +  + P  V         ++AC
Sbjct: 255 TALLTQ--------DGL----LFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIAC 302

Query: 527 GHSITIALTA-TGQVFSMGSADYGQLGSPGSTGK---FPTRIEGNIKHRYIEDIACGSYH 582
           G   T+A  +  G+VFS GS   GQLG+ G+  +    P ++  N      ED+   S+ 
Sbjct: 303 GRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPMKVSSN------EDLKFESHT 356

Query: 583 -----IAVVSSKSEVYTWGKGAN 600
                I +      +  W K  N
Sbjct: 357 SEKELIMIAGENQSILLWIKKEN 379



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 155/355 (43%), Gaps = 46/355 (12%)

Query: 277 SSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQG---QIFSWGEGSGGKLGHGVE 333
           S+A  R ALL  V E+T     + I C S     + + G   Q+     GS G       
Sbjct: 38  STAGLRRALLRSV-EAT-----RQICCSSGRLAFLERGGAGVQVHQLLPGSDG------- 84

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
             +  PK I       IH +  G  H   ++  G  + + +             + H   
Sbjct: 85  --LRTPKCIKLGKNMKIHSMDLGADHMLILSSDGKPFEYDN-----------YSMKH--- 128

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETL 452
            +    ++  +I  I CG +H+ A++  G+LF +G    G LG G +  ST+ P+ VE L
Sbjct: 129 LRFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHL 188

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC 512
             +     S G  H+ A+       SG+       +++WG    GQLG    E +  P  
Sbjct: 189 AGIPLAQISAGEAHSMAL-----SMSGN-------IYSWGKNEFGQLGLDHTESKDSPSL 236

Query: 513 VKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY 572
           ++  D+     +ACG S T  LT  G +F+ G+  +GQLG   +  +    +   +    
Sbjct: 237 IEALDNQKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNR 296

Query: 573 IEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVK 626
           +  IACG +H +A VS   +V+++G G  GQLG+G   ++  P  ++   ++ +K
Sbjct: 297 VTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPMKVSSNEDLK 351



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 116/239 (48%), Gaps = 26/239 (10%)

Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
           + ++I S+  G  H   ++S GK F +           D  S    R    L+E K +  
Sbjct: 95  KNMKIHSMDLGADHMLILSSDGKPFEY-----------DNYSMKHLRFESILQEKKIIQI 143

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV-PLCVKVSDDI 519
           +CG +H+ A+         S G    +LF WG    GQLG G   P    P  V+    I
Sbjct: 144 TCGDYHSLAL---------SKG---GELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGI 191

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIAC 578
              +++ G + ++AL+ +G ++S G  ++GQLG   +  K  P+ IE  + ++ +E +AC
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEA-LDNQKVEFLAC 250

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           G  H A+++    ++T+G G +GQLGH   +N+  P LV  L   +V  + CG   T A
Sbjct: 251 GGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWHTLA 309



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/195 (33%), Positives = 102/195 (52%), Gaps = 13/195 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++F WG+ L +G LG    G +  S        P+++E    +    I+ G  H++ ++
Sbjct: 157 GELFAWGQNL-HGQLGV---GRKFPSTTA-----PQIVEHLAGIPLAQISAGEAHSMALS 207

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G I+SWG+   G+LG         P LI+AL+   +  +ACG  HT  +T  G L+T+
Sbjct: 208 MSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQDGLLFTF 267

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G H  G LG  S  +   P  V+ ++ G +++ I CG WHT A ++  GK+F+FG G 
Sbjct: 268 GAGKH--GQLGHNSTQNELRPCLVA-ELAGNRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324

Query: 432 FGALGHGDRSSTSVP 446
            G LG+G      +P
Sbjct: 325 EGQLGNGGTRDQLIP 339



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 7/120 (5%)

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY----IEDIAC 578
           ++ CG   ++AL+  G++F+ G   +GQLG      KFP+     I        +  I+ 
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGV---GRKFPSTTAPQIVEHLAGIPLAQISA 198

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G  H   +S    +Y+WGK   GQLG    E+K +P+L+EAL +++V+ + CG + TA +
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALL 258


>gi|168024283|ref|XP_001764666.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684244|gb|EDQ70648.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 401

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 193/427 (45%), Gaps = 67/427 (15%)

Query: 249 FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
             G+GD   W    GNG  G       +  A       P V +S   L   ++ACG  H 
Sbjct: 1   MSGIGDKHRWVALWGNGDYG------RLGQASGESFWEPTVCKSMQHLQPIALACGGAHT 54

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL-IDAL-NGSNIHMVACGEFHTCAVTLS 366
           +++T++G++++ G    G+LG  +    S   L ++ L + +    +A G+FH+ A++  
Sbjct: 55  LVLTEEGRVYASGLNDWGQLGLPLSTGHSMEFLEVEGLPDEAKFTHIAAGDFHSAAISED 114

Query: 367 GDLYTWGDGIHNLGLLGQVSE----ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
           G +Y WG        LG+  +     + W+       ++  +I ++  G  H+ A++  G
Sbjct: 115 GRVYMWGRNTQGQLGLGKRGKGKVCAAQWVE-----SLKDFRIQALALGAEHSLALSEEG 169

Query: 423 KLFTFGDGTFGALGHGD------------RSSTSVPREVETLKELKTVMASCGVWHTAAI 470
           ++ ++G    G LGHG+            +SS   PR V+  +++K    + G+ H+A +
Sbjct: 170 EVLSWGTSLNGRLGHGEGHRSSSMFSIFRKSSEYTPRLVKGFRDVKVSKVAAGLTHSACL 229

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD----AEPRVVPLCVKVSDDISFCKVAC 526
            E               LFT+G G E QLG G     +EP+ VP+   V +      +AC
Sbjct: 230 DE------------QGSLFTFGKGRECQLGLGGDRDISEPKRVPVIPPVEE------IAC 271

Query: 527 GHSITIALTATGQVFSMGSADYGQLG---SPGSTGKFPTRIEGNIKHRYIEDIACGSYHI 583
           G   T A++  GQ++  GS +YG LG      +    P  +EG ++   +  + CG  H 
Sbjct: 272 GGYHTGAISRNGQLYMWGSNEYGCLGFGYKHQNATSLPMLVEGALESLRVTQVQCGWKHT 331

Query: 584 AVVSSKSEVYTWGKGAN------------GQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
             ++   +V+ WG G +            GQLG G+  +   PT V++   K ++ + CG
Sbjct: 332 MALTVDGDVFAWGWGGSQGTHGVDGLSSGGQLGLGNENDFLEPTQVKSKNMKAIQ-ISCG 390

Query: 632 SNFTAAI 638
            N + AI
Sbjct: 391 FNHSGAI 397



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 118/235 (50%), Gaps = 19/235 (8%)

Query: 253 GDVFIWGEGLGNGLLG---GAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAV 309
           G+V  WG  L NG LG   G  +    S   +     P++++    +    +A G  H+ 
Sbjct: 169 GEVLSWGTSL-NGRLGHGEGHRSSSMFSIFRKSSEYTPRLVKGFRDVKVSKVAAGLTHSA 227

Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
            + +QG +F++G+G   +LG G + D+S PK +  +    +  +ACG +HT A++ +G L
Sbjct: 228 CLDEQGSLFTFGKGRECQLGLGGDRDISEPKRVPVI--PPVEEIACGGYHTGAISRNGQL 285

Query: 370 YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
           Y WG   +     G   + +  +P  V G +E L+++ + CG  HT A+T  G +F +G 
Sbjct: 286 YMWGSNEYGCLGFGYKHQNATSLPMLVEGALESLRVTQVQCGWKHTMALTVDGDVFAWGW 345

Query: 430 G------------TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
           G            + G LG G+ +    P +V++ K +K +  SCG  H+ AI+E
Sbjct: 346 GGSQGTHGVDGLSSGGQLGLGNENDFLEPTQVKS-KNMKAIQISCGFNHSGAILE 399



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 158/353 (44%), Gaps = 69/353 (19%)

Query: 203 SVSKSLNFVASGGL-DDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEG 261
           S   S+ F+   GL D+A      A  F    S+A+S        ED    G V++WG  
Sbjct: 79  STGHSMEFLEVEGLPDEAKFTHIAAGDFH---SAAIS--------ED----GRVYMWGRN 123

Query: 262 LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWG 321
              G LG       +    +      + +ES      Q++A G++H++ ++++G++ SWG
Sbjct: 124 T-QGQLG-------LGKRGKGKVCAAQWVESLKDFRIQALALGAEHSLALSEEGEVLSWG 175

Query: 322 EGSGGKLGHGV------------EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
               G+LGHG             ++    P+L+       +  VA G  H+  +   G L
Sbjct: 176 TSLNGRLGHGEGHRSSSMFSIFRKSSEYTPRLVKGFRDVKVSKVAAGLTHSACLDEQGSL 235

Query: 370 YTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +T+G G    LGL G   +IS   P++V        +  I CG +HT AI+  G+L+ +G
Sbjct: 236 FTFGKGRECQLGLGGD-RDISE--PKRVPVIPP---VEEIACGGYHTGAISRNGQLYMWG 289

Query: 429 DGTFGALGHG--DRSSTSVPREVE-TLKELKTVMASCGVWHTAAIVEVAGK--------- 476
              +G LG G   +++TS+P  VE  L+ L+     CG  HT A+  V G          
Sbjct: 290 SNEYGCLGFGYKHQNATSLPMLVEGALESLRVTQVQCGWKHTMALT-VDGDVFAWGWGGS 348

Query: 477 --TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
             T G +GLSS           GQLG G+    + P  VK S ++   +++CG
Sbjct: 349 QGTHGVDGLSSG----------GQLGLGNENDFLEPTQVK-SKNMKAIQISCG 390


>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
          Length = 1016

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 118/217 (54%), Gaps = 15/217 (6%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFH 359
           I CG  H++ ++K G++F+WG+   G+LG G +    + P++++ L G  +  ++ GE H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           + A+++SG++Y+WG   +  G LG     S   P  + G ++  ++  + CG  H+A +T
Sbjct: 203 SMALSMSGNIYSWGK--NEFGQLGLGHTESKDYPSLIEG-LDNQKVEFVACGGSHSALLT 259

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G LFTFG G  G LGH    +   P  V  L   +    +CG WHT A V   G    
Sbjct: 260 QDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLG---- 315

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
                  K+F++G G +GQLG+G    +++PL VKVS
Sbjct: 316 -------KVFSFGSGKDGQLGNGGTRDQLMPLPVKVS 345



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 160/365 (43%), Gaps = 34/365 (9%)

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
           GGA   V    A    A  PK ++    +   S+  G++H ++++  G+ F +   S   
Sbjct: 69  GGAGVQVHQLLAGSGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYS--- 125

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
                   + + +  + L    I  + CG++H+ A++  G+L+ WG  +H  G LG   +
Sbjct: 126 --------MKHLRFENVLQEKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRK 175

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPR 447
                  ++   + G+ ++ I  G  H+ A++ +G ++++G   FG LG G   S   P 
Sbjct: 176 FPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPS 235

Query: 448 EVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR 507
            +E L   K    +CG  H+A + +        +GL    LFT+G G  GQLGH   +  
Sbjct: 236 LIEGLDNQKVEFVACGGSHSALLTQ--------DGL----LFTFGAGKHGQLGHNSTQNE 283

Query: 508 VVPLCVKVSDDISFCKVACGHSITIALTA-TGQVFSMGSADYGQLGSPGSTGK---FPTR 563
           + P  V         ++ACG   T+A  +  G+VFS GS   GQLG+ G+  +    P +
Sbjct: 284 LRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVK 343

Query: 564 IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDK 623
           +  + + + +E        I +      +  W K  N  +    N  +  PTL E    +
Sbjct: 344 VSSSEELK-LESHTSEKELIMIAGGNQSILLWIKKENSYV----NLKRTIPTLNEGTVKR 398

Query: 624 QVKSV 628
            +  V
Sbjct: 399 WIADV 403



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 118/239 (49%), Gaps = 26/239 (10%)

Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
           + ++I S+  G  H   ++S GK F +           D  S    R    L+E K +  
Sbjct: 95  KNMKIHSVDQGAEHMLILSSDGKPFEY-----------DNYSMKHLRFENVLQEKKIIQI 143

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP-RVVPLCVKVSDDI 519
           +CG +H+ A+         S G    +LF WG    GQLG G   P    P  V+    +
Sbjct: 144 TCGDYHSLAL---------SKG---GELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV 191

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIAC 578
              +++ G + ++AL+ +G ++S G  ++GQLG   +  K +P+ IEG + ++ +E +AC
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEG-LDNQKVEFVAC 250

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           G  H A+++    ++T+G G +GQLGH   +N+  P LV  L   +V  + CG   T A
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLA 309



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 105/200 (52%), Gaps = 13/200 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++F WG+ L +G LG    G +  S        P+++E    +    I+ G  H++ ++
Sbjct: 157 GELFAWGQNL-HGQLGV---GRKFPSTTT-----PQIVEHLAGVPLAQISAGEAHSMALS 207

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G I+SWG+   G+LG G      YP LI+ L+   +  VACG  H+  +T  G L+T+
Sbjct: 208 MSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTF 267

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G H  G LG  S  +   P  V+ ++ G +++ I CG WHT A ++  GK+F+FG G 
Sbjct: 268 GAGKH--GQLGHNSTQNELRPCLVA-ELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324

Query: 432 FGALGHGDRSSTSVPREVET 451
            G LG+G      +P  V+ 
Sbjct: 325 DGQLGNGGTRDQLMPLPVKV 344



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 7/120 (5%)

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY----IEDIAC 578
           ++ CG   ++AL+  G++F+ G   +GQLG      KFP+     I        +  I+ 
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGV---GRKFPSTTTPQIVEHLAGVPLAQISA 198

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G  H   +S    +Y+WGK   GQLG G  E+K  P+L+E L +++V+ V CG + +A +
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSHSALL 258


>gi|337744685|ref|YP_004638847.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
           KNP414]
 gi|336295874|gb|AEI38977.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
           KNP414]
          Length = 1224

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 148/327 (45%), Gaps = 28/327 (8%)

Query: 307 HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
           H + +   G ++ WG    G+LG G     S P  +  L G  + M+A GE HT A+   
Sbjct: 700 HTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTG--MKMIAGGENHTVALRSD 757

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
           G L+TWG   +  G LG  S  + + P +VS        +++  G  H+ A+ S G ++ 
Sbjct: 758 GTLHTWG--YNGYGQLGDDSTTTRYSPVQVSTLT---NWTAVSAGENHSLALKSDGTVWA 812

Query: 427 FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
           FG   +G LG G  SS   P +V+ L              T  +   AGK       S  
Sbjct: 813 FGYNGYGQLGDGTTSSQRTPVQVKDL--------------TGVVAIAAGKDFSLALKSDG 858

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
            +++WG    G+LG+G      VP+ V +  D+    +A G    +AL   G VF+ G  
Sbjct: 859 TVWSWGQNTYGELGNGTTTRSSVPVQVALLTDVK--AIAAGDYHGVALKKDGSVFAWGYN 916

Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             G+LG+  ST    T ++  +    I+ IA G YH   + S   V++WG    GQLG G
Sbjct: 917 GNGELGN-SSTISQSTPVQSGVTG--IKGIAAGPYHTLALKSDGTVWSWGYNGYGQLGSG 973

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSN 633
           +N ++  P  +  L    + S+  G N
Sbjct: 974 NNTSRSVPAAIPGL--ASMASIAAGEN 998



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 138/297 (46%), Gaps = 38/297 (12%)

Query: 215  GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGL-GNGLLGGAVNG 273
            G D   +R S      ++  +AVS+    S     DG     +W  G  G G LG     
Sbjct: 772  GDDSTTTRYSPVQVSTLTNWTAVSAGENHSLALKSDGT----VWAFGYNGYGQLG----- 822

Query: 274  VEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
             + +++ +R  +  K L   V     +IA G   ++ +   G ++SWG+ + G+LG+G  
Sbjct: 823  -DGTTSSQRTPVQVKDLTGVV-----AIAAGKDFSLALKSDGTVWSWGQNTYGELGNGTT 876

Query: 334  ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
               S P  +  L  +++  +A G++H  A+   G ++ WG   +  G LG  S IS   P
Sbjct: 877  TRSSVPVQVALL--TDVKAIAAGDYHGVALKKDGSVFAWG--YNGNGELGNSSTISQSTP 932

Query: 394  RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
              V   + G++   I  GP+HT A+ S G ++++G   +G LG G+ +S SVP  +  L 
Sbjct: 933  --VQSGVTGIK--GIAAGPYHTLALKSDGTVWSWGYNGYGQLGSGNNTSRSVPAAIPGLA 988

Query: 454  ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
             + ++ A           E      G++G+    L++WG  A GQLG+G      VP
Sbjct: 989  SMASIAAG----------ENQSIAYGNDGI----LYSWGRNANGQLGNGTTVDTNVP 1031



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 92/201 (45%), Gaps = 28/201 (13%)

Query: 253  GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            G V+ WG+     LGNG           SS   + ALL          D ++IA G  H 
Sbjct: 858  GTVWSWGQNTYGELGNGT-------TTRSSVPVQVALL---------TDVKAIAAGDYHG 901

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
            V + K G +F+WG    G+LG+      S P +   + G  I  +A G +HT A+   G 
Sbjct: 902  VALKKDGSVFAWGYNGNGELGNSSTISQSTP-VQSGVTG--IKGIAAGPYHTLALKSDGT 958

Query: 369  LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            +++WG   +  G LG  +  S  +P  + G      ++SI  G   + A  + G L+++G
Sbjct: 959  VWSWG--YNGYGQLGSGNNTSRSVPAAIPGLAS---MASIAAGENQSIAYGNDGILYSWG 1013

Query: 429  DGTFGALGHGDRSSTSVPREV 449
                G LG+G    T+VP +V
Sbjct: 1014 RNANGQLGNGTTVDTNVPHKV 1034



 Score = 56.2 bits (134), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 8/156 (5%)

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
           S   ++ WG    GQLG G +    VP   KV +      +A G + T+AL + G + + 
Sbjct: 706 SDGTVWGWGYNGHGQLGTGTSNSTSVPG--KVINLTGMKMIAGGENHTVALRSDGTLHTW 763

Query: 544 GSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
           G   YGQLG   +T ++ P ++           ++ G  H   + S   V+ +G    GQ
Sbjct: 764 GYNGYGQLGDDSTTTRYSPVQVS---TLTNWTAVSAGENHSLALKSDGTVWAFGYNGYGQ 820

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           LG G   +++TP  V+ L    V ++  G +F+ A+
Sbjct: 821 LGDGTTSSQRTPVQVKDLTG--VVAIAAGKDFSLAL 854


>gi|148222256|ref|NP_001090238.1| NIMA-related kinase 8 [Xenopus laevis]
 gi|50417684|gb|AAH77830.1| Nek8 protein [Xenopus laevis]
          Length = 658

 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 147/339 (43%), Gaps = 42/339 (12%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           +++WG G            +S P  +  LN + +  V+ G      VT SG L  W    
Sbjct: 282 VYTWGSG------------ISNPLRLPMLN-TEVVQVSAGRTQKAGVTKSGRLIMWEATP 328

Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEG---LQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
              G       I H  P+ +S  +EG   + I  + CG   TA +T  G + TFG G+ G
Sbjct: 329 VGTGASSLPGSIDHAQPQFISRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNG 388

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
            LGH + +  + P+ VE L   + V  SCG  H  A+         SN    K++F+WG 
Sbjct: 389 CLGHDNFNDVTQPKIVEALLGYEIVHVSCGASHAIAV---------SN---EKEVFSWGR 436

Query: 494 GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGS 553
           G  G+LG G  +    P  V +  +    K+ CG   ++ LT   Q+ + GS  + +LG 
Sbjct: 437 GDNGRLGLGSQDSHNSPQQVNIPQEYEAQKIVCGIDSSMILTVANQLLACGSNRFNKLGL 496

Query: 554 PGSTGKFPTRIEGNIKHRYI-----------EDIAC---GSYHIAVVSSKSEVYTWGKGA 599
                      E  ++  Y            E I C   G+ H AVV++  + YT+G   
Sbjct: 497 DHILSASEPYSEEQVEEAYTFTPIQSAPLNQEAILCADVGTSHSAVVTALGQCYTFGSNQ 556

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +GQLG   + N + P LV AL+   V    CG  +T A+
Sbjct: 557 HGQLGTSVHRNSRVPCLVTALQGLTVTMAACGDAYTVAV 595



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 146/313 (46%), Gaps = 8/313 (2%)

Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
            + + LE    +  + ++CG      +T +G I ++G GS G LGH    DV+ PK+++A
Sbjct: 347 FISRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHDNFNDVTQPKIVEA 406

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           L G  I  V+CG  H  AV+   ++++WG G  + G LG  S+ SH  P++V+   E  +
Sbjct: 407 LLGYEIVHVSCGASHAIAVSNEKEVFSWGRG--DNGRLGLGSQDSHNSPQQVNIPQE-YE 463

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV--MASC 462
              I CG   +  +T A +L   G   F  LG     S S P   E ++E  T   + S 
Sbjct: 464 AQKIVCGIDSSMILTVANQLLACGSNRFNKLGLDHILSASEPYSEEQVEEAYTFTPIQSA 523

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
            +   A +    G +  +   +  + +T+G    GQLG        VP  V     ++  
Sbjct: 524 PLNQEAILCADVGTSHSAVVTALGQCYTFGSNQHGQLGTSVHRNSRVPCLVTALQGLTVT 583

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIAC--G 579
             ACG + T+A+ A GQVF+ G    G+LG        P  ++    H Y +  +AC  G
Sbjct: 584 MAACGDAYTVAVGAEGQVFTWGKGARGRLGRRDEGIGIPKIVQLEESHPYVVTSVACCHG 643

Query: 580 SYHIAVVSSKSEV 592
           +  +AV  S  ++
Sbjct: 644 NTLLAVKPSLEDI 656



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 134/298 (44%), Gaps = 46/298 (15%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +  +G G  NG LG           +  D   PK++E+ +  +   ++CG+ HA+ V+
Sbjct: 377 GIIMTFGSG-SNGCLG---------HDNFNDVTQPKIVEALLGYEIVHVSCGASHAIAVS 426

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            + ++FSWG G  G+LG G +   + P+ ++         + CG   +  +T++  L   
Sbjct: 427 NEKEVFSWGRGDNGRLGLGSQDSHNSPQQVNIPQEYEAQKIVCGIDSSMILTVANQLLAC 486

Query: 373 GDGIHN-LGL-----------LGQVSEISHWIPRKVSGQMEGLQISSICC---GPWHTAA 417
           G    N LGL             QV E   + P     Q   L   +I C   G  H+A 
Sbjct: 487 GSNRFNKLGLDHILSASEPYSEEQVEEAYTFTPI----QSAPLNQEAILCADVGTSHSAV 542

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +T+ G+ +TFG    G LG     ++ VP  V  L+ L   MA+CG  +T A+       
Sbjct: 543 VTALGQCYTFGSNQHGQLGTSVHRNSRVPCLVTALQGLTVTMAACGDAYTVAV------- 595

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCKVACGHSITI 532
            G+ G    ++FTWG GA G+LG  D     P++V L  + S       VAC H  T+
Sbjct: 596 -GAEG----QVFTWGKGARGRLGRRDEGIGIPKIVQL--EESHPYVVTSVACCHGNTL 646



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 14/198 (7%)

Query: 470 IVEV-AGKTSGSNGLSSKKLFTW-----GDGAEGQLGHGD-AEPRVVPLCVKVSDDISFC 522
           +V+V AG+T  +    S +L  W     G GA    G  D A+P+ +   ++    ++  
Sbjct: 302 VVQVSAGRTQKAGVTKSGRLIMWEATPVGTGASSLPGSIDHAQPQFISRFLEGQSGVTIK 361

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
            V+CG   T  LT  G + + GS   G LG          +I   +    I  ++CG+ H
Sbjct: 362 HVSCGDLFTACLTDRGIIMTFGSGSNGCLGHDNFNDVTQPKIVEALLGYEIVHVSCGASH 421

Query: 583 IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHK 642
              VS++ EV++WG+G NG+LG G  ++  +P  V   ++ + + +VCG + +  +    
Sbjct: 422 AIAVSNEKEVFSWGRGDNGRLGLGSQDSHNSPQQVNIPQEYEAQKIVCGIDSSMIL---- 477

Query: 643 GVSIADHSICSGCRNQFN 660
             ++A+  +  G  N+FN
Sbjct: 478 --TVANQLLACG-SNRFN 492


>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
           gallopavo]
          Length = 567

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 148/295 (50%), Gaps = 21/295 (7%)

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF-HTCAVTLS 366
            + VT+  ++F  G    G LG G       PK +D+L G  I  ++ G   H    T  
Sbjct: 75  VLYVTENDEVFVLGMNCSGCLGTGDVQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEE 134

Query: 367 GDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
           G++YTWG   HN    LG  +     +P +VS  +   ++  + CG  H+  +TS G+++
Sbjct: 135 GEVYTWG---HNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVY 191

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTAAIVEVAGKTSGSNGLS 484
           T+G    G +G G  ++  +PR V +  + K V+  +CG   + A+VE        NG  
Sbjct: 192 TWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVE--------NG-- 241

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
             +++ WG    GQLG G +  +  P  +     I   +VACG + T+ LT  GQ+++ G
Sbjct: 242 --EVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWG 299

Query: 545 SADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKS-EVYTWGK 597
           +  YGQLG+   + + +PT +  + K R IE  AC S H +   ++S +VY WG+
Sbjct: 300 ANSYGQLGTGNKSNQSYPTTVTVD-KDRVIEIAACHSAHTSAAKTQSGQVYMWGQ 353



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 25/276 (9%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGS----KHAVLVTKQGQIFSWGEGSGGKLGHG 331
           + + D +  + PK L+S   L  + IAC S     H VL T++G++++WG  +  +LG+G
Sbjct: 95  LGTGDVQSTIEPKRLDS---LCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNG 151

Query: 332 VEADVSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH 390
                  P  +   L    +  VACG  H+  +T  G++YTW  G +N G +G  S  + 
Sbjct: 152 TTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTW--GYNNSGQVGSGSTANQ 209

Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
            IPR+V+  ++   + +I CG   + A+   G+++ +G    G LG G   +   P  + 
Sbjct: 210 PIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIA 269

Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
            L+ ++    +CG  HT  + +              +++ WG  + GQLG G+   +  P
Sbjct: 270 ALQGIRVQRVACGCAHTLVLTD------------EGQIYAWGANSYGQLGTGNKSNQSYP 317

Query: 511 LCVKVSDDISFCKVACGHS--ITIALTATGQVFSMG 544
             V V  D    ++A  HS   + A T +GQV+  G
Sbjct: 318 TTVTVDKD-RVIEIAACHSAHTSAAKTQSGQVYMWG 352



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 111/226 (49%), Gaps = 19/226 (8%)

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +T   ++F  G    G LG GD  ST  P+ +++L   K    S G      +    G+ 
Sbjct: 78  VTENDEVFVLGMNCSGCLGTGDVQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGE- 136

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI---SFCKVACGHSITIAL 534
                     ++TWG  A  QLG+G     +VP   +VS ++      +VACG   ++ L
Sbjct: 137 ----------VYTWGHNAYSQLGNGTTNHGLVP--CQVSTNLVNKKVIEVACGSHHSMVL 184

Query: 535 TATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
           T+ G+V++ G  + GQ+GS GST     P R+   ++++ + +IACG      V    EV
Sbjct: 185 TSDGEVYTWGYNNSGQVGS-GSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEV 243

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           Y WG   NGQLG G + N+ TP  + AL+  +V+ V CG   T  +
Sbjct: 244 YVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVL 289



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 115/234 (49%), Gaps = 25/234 (10%)

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAA 469
           GP H    T  G+++T+G   +  LG+G  +   VP +V T L   K +  +CG  H+  
Sbjct: 125 GP-HVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMV 183

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVA 525
           +             S  +++TWG    GQ+G G       PR V  C++   +     +A
Sbjct: 184 LT------------SDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQ---NKVVVNIA 228

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHI 583
           CG   ++A+   G+V+  G    GQLG  GS+G  PT  RI   ++   ++ +ACG  H 
Sbjct: 229 CGQMCSMAVVENGEVYVWGYNGNGQLGL-GSSGNQPTPCRIAA-LQGIRVQRVACGCAHT 286

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            V++ + ++Y WG  + GQLG G+  N+  PT V   +D+ ++   C S  T+A
Sbjct: 287 LVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVTVDKDRVIEIAACHSAHTSA 340



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 124/241 (51%), Gaps = 24/241 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+V+ WG    + L  G  N   +      + +  KV+E         +ACGS H++++T
Sbjct: 135 GEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIE---------VACGSHHSMVLT 185

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYT 371
             G++++WG  + G++G G  A+   P+ + + L    +  +ACG+  + AV  +G++Y 
Sbjct: 186 SDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYV 245

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   +  G LG  S  +   P +++  ++G+++  + CG  HT  +T  G+++ +G  +
Sbjct: 246 WG--YNGNGQLGLGSSGNQPTPCRIAA-LQGIRVQRVACGCAHTLVLTDEGQIYAWGANS 302

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           +G LG G++S+ S P  V   K+    +A+C   HT+     A KT       S +++ W
Sbjct: 303 YGQLGTGNKSNQSYPTTVTVDKDRVIEIAACHSAHTS-----AAKT------QSGQVYMW 351

Query: 492 G 492
           G
Sbjct: 352 G 352


>gi|301755556|ref|XP_002913645.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC5-like
           [Ailuropoda melanoleuca]
          Length = 1035

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 149/287 (51%), Gaps = 25/287 (8%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGEFH 359
           IACG  H++ ++K G++F+WG+   G+LG G + A +  P+ ++ L+G  +  ++ G+ H
Sbjct: 154 IACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAGKAH 213

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           + A+++SG++Y+WG   ++LG LG         P  +   ++  Q+  + CG  HTA +T
Sbjct: 214 SMALSMSGNVYSWGR--NDLGQLGLGHTDGEDFPSLIE-TLDNQQVEFLACGGSHTALLT 270

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
           + G +FTFG G +G LGH    +   PR V  L   +    +CG  HT A V   G    
Sbjct: 271 TDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDLG---- 326

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV--SDDISF-CKVACGHSITIALTA 536
                  K+F++G G EGQLG+G    +++PL +K+  ++++ F  + +    + IA   
Sbjct: 327 -------KVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESRTSDKELVMIAGGN 379

Query: 537 TGQVFSMGSAD-YGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
              +  M   + Y  L       K PT  EG +K R+I D+    + 
Sbjct: 380 QSVLLWMEKKNPYVNLRR-----KIPTLNEGTVK-RWIADVGTKQWQ 420



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 151/338 (44%), Gaps = 37/338 (10%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
           +   S+  G++H ++++  G+ F +               + + +    L   +I  +AC
Sbjct: 109 MKIHSVDQGAEHMLILSSDGKPFEYN------------YSIEHARFQCILQEKSIIQIAC 156

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR-KVSGQMEGLQISSICCGPWH 414
           G++H+ A++  G+L+ WG  +H  G LG V  +   IP  +    + G+ +  I  G  H
Sbjct: 157 GDYHSLALSKGGELFAWGQNLH--GQLG-VGRLFASIPTPQAVEHLSGVPLVQISAGKAH 213

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           + A++ +G ++++G    G LG G       P  +ETL   +    +CG  HTA +    
Sbjct: 214 SMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLT--- 270

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                ++GL    +FT+G G  GQLGH   +  + P  V         ++ACG   T+A 
Sbjct: 271 -----TDGL----VFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAY 321

Query: 535 TA-TGQVFSMGSADYGQLGSPGSTGK---FPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
            +  G+VFS GS   GQLG+ G+  +    P ++  N + ++ E        + +     
Sbjct: 322 VSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKF-ESRTSDKELVMIAGGNQ 380

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSV 628
            V  W +  N  +    N  ++ PTL E    + +  V
Sbjct: 381 SVLLWMEKKNPYV----NLRRKIPTLNEGTVKRWIADV 414



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 114/237 (48%), Gaps = 27/237 (11%)

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
           ++I S+  G  H   ++S GK F +              S    R    L+E   +  +C
Sbjct: 109 MKIHSVDQGAEHMLILSSDGKPFEYN------------YSIEHARFQCILQEKSIIQIAC 156

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISF 521
           G +H+ A+         S G    +LF WG    GQLG G     +  P  V+    +  
Sbjct: 157 GDYHSLAL---------SKG---GELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPL 204

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
            +++ G + ++AL+ +G V+S G  D GQLG   + G+ FP+ IE  + ++ +E +ACG 
Sbjct: 205 VQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIE-TLDNQQVEFLACGG 263

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            H A++++   V+T+G G  GQLGH   +N+  P LV  L   +V  + CG   T A
Sbjct: 264 SHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLA 320



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 13/195 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++F WG+ L +G LG       I +        P+ +E    +    I+ G  H++ ++
Sbjct: 168 GELFAWGQNL-HGQLGVGRLFASIPT--------PQAVEHLSGVPLVQISAGKAHSMALS 218

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G ++SWG    G+LG G      +P LI+ L+   +  +ACG  HT  +T  G ++T+
Sbjct: 219 MSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLTTDGLVFTF 278

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G +  G LG  S  +   PR V+ ++ G +++ I CG  HT A ++  GK+F+FG G 
Sbjct: 279 GAGKY--GQLGHNSTQNELRPRLVT-ELAGNRVTQIACGRRHTLAYVSDLGKVFSFGSGK 335

Query: 432 FGALGHGDRSSTSVP 446
            G LG+G   +  +P
Sbjct: 336 EGQLGNGGTHNQLIP 350



 Score = 70.5 bits (171), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 65/120 (54%), Gaps = 1/120 (0%)

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT-RIEGNIKHRYIEDIAC 578
           S  ++ACG   ++AL+  G++F+ G   +GQLG        PT +   ++    +  I+ 
Sbjct: 150 SIIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISA 209

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G  H   +S    VY+WG+   GQLG G  + +  P+L+E L ++QV+ + CG + TA +
Sbjct: 210 GKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALL 269


>gi|74200231|dbj|BAE22920.1| unnamed protein product [Mus musculus]
          Length = 681

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 165/354 (46%), Gaps = 59/354 (16%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H  +VT   +++ +G  + G+LG G +A +  P  I AL    + + ACG  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137

Query: 361 CAVTLSGDLYTWGDGIHNLGLLG--------QVSEISHWIPRKVSGQMEGLQISSICCGP 412
              T +G +Y  G   +N G LG           +I  + P           I  +  G 
Sbjct: 138 LVSTDTGGVYAAGG--NNEGQLGLGDTDDRDTFHQIVFFTPADT--------IKQLSAGA 187

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
             +AA+T  GKLF +GD + G +G  D+S+  +P EV   K +  +  SCG +H+A +  
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT- 244

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-------AEPRVVPLCVKVSDDISFCKVA 525
                         +L+T+G+   G+LG  +       +  RV+ +  +V       +VA
Sbjct: 245 -----------MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERV------IQVA 287

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACG 579
           CG   T+ LT    V++ G   +GQLG     G F      P  IE  IK + I  I+CG
Sbjct: 288 CGGGHTVVLTEK-VVYAFGLGQFGQLG----LGTFLFETSEPKIIE-RIKDQKICHISCG 341

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
             H A+++    +YT+G G +G+LG G  +  N+  PTL        V+ + CG
Sbjct: 342 ENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 143/297 (48%), Gaps = 33/297 (11%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDALNGSNIHMVACGEFHT 360
           ACG  H ++ T  G +++ G  + G+LG G   D  ++ +++       I  ++ G   +
Sbjct: 131 ACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTS 190

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T  G L+ WGD  ++ G +G   + +  IP +V+    G  IS I CG +H+A +T 
Sbjct: 191 AALTEDGKLFMWGD--NSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTM 245

Query: 421 AGKLFTFGDGTFGALGHGDR--SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
            G+L+TFG+   G LG  +    +   P+ V  + E + +  +CG  HT  + E      
Sbjct: 246 DGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTE------ 298

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHG-----DAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
                  K ++ +G G  GQLG G      +EP++    ++   D   C ++CG + T  
Sbjct: 299 -------KVVYAFGLGQFGQLGLGTFLFETSEPKI----IERIKDQKICHISCGENHTAL 347

Query: 534 LTATGQVFSMGSADYGQ--LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
           +T  G +++ G   +G+  LG    T +F   +  N     ++ IACG  H+ V ++
Sbjct: 348 MTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFAT 404



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 120/264 (45%), Gaps = 35/264 (13%)

Query: 215 GLDDANSRSS--------TADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGL 266
           GL D + R +         AD+ +  LS+  ++S+  +  ED    G +F+WG+      
Sbjct: 158 GLGDTDDRDTFHQIVFFTPADTIK-QLSAGANTSA--ALTED----GKLFMWGDN----- 205

Query: 267 LGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGG 326
                +  +I   D+ +  +P   E TV      I+CG  H+  VT  G+++++GE   G
Sbjct: 206 -----SEGQIGLEDKSNVCIPH--EVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENG 258

Query: 327 KLGHGVEADVSY--PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQ 384
           KLG   E  +++  P+ +  +    I  VACG  HT  +T   +   +  G+   G LG 
Sbjct: 259 KLGLPNELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVLT---EKVVYAFGLGQFGQLGL 314

Query: 385 VSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS 444
            + +      K+  +++  +I  I CG  HTA +T  G L+TFGDG  G LG G  + T+
Sbjct: 315 GTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTN 374

Query: 445 --VPREVETLKELKTVMASCGVWH 466
              P            + +CG  H
Sbjct: 375 QFFPTLCSNFLRFAVQLIACGGCH 398



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 11/129 (8%)

Query: 507 RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEG 566
           RV P        I F       S ++ +  TG VF+ G   + +          P++   
Sbjct: 20  RVAPAIFPKQAQIPFAGFGMAESESL-VPDTGAVFTFGKTKFAE--------NIPSKFW- 69

Query: 567 NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVK 626
             K+     ++CG  H A+V+  +++Y +G    GQLG G       PT ++AL+ ++VK
Sbjct: 70  -FKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVK 128

Query: 627 SVVCGSNFT 635
              CG N T
Sbjct: 129 LAACGRNHT 137


>gi|148908280|gb|ABR17254.1| unknown [Picea sitchensis]
          Length = 286

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 144/304 (47%), Gaps = 29/304 (9%)

Query: 274 VEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
           +E+  A R D    KVL          I+ G+ H V +     + SWG G  G+LGHG  
Sbjct: 1   MEVEEATRNDGQRRKVL---------LISAGASHTVALVAGNLVCSWGRGEDGQLGHGDA 51

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG-DLYTWGDGIHNLGLLGQVSEISHWI 392
            D   P  + AL+G  I  V CG  HT A + S   +Y+WG G  + G LG  +    +I
Sbjct: 52  EDRPMPTFVSALDGCEITSVICGADHTTAYSDSRLVVYSWGWG--DFGRLGHGNSSDLFI 109

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
           P  +   ++GLQI  I CG  H  A+T  G++ ++G    G LG GD    S P+ V+  
Sbjct: 110 PHAIK-TLQGLQIKQIACGDSHCLAVTINGEVQSWGRNQNGQLGVGDNIDHSFPQRVKLP 168

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC 512
            E + V  SCG  HT AI    GK++         +F+WG G  GQLGHGD   R +P+ 
Sbjct: 169 AEEEVVQVSCGWRHTVAI---TGKSN---------VFSWGRGTSGQLGHGDILDRNMPVL 216

Query: 513 VK-VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHR 571
           ++ +S D S C+       T+    +G  +   S  Y  +     TG+F   +E ++   
Sbjct: 217 IEALSVDGSACEQIQTSKTTV---LSGSSWISPSERYAVVPDETGTGQFSAALESSVGDA 273

Query: 572 YIED 575
            + D
Sbjct: 274 SVPD 277



 Score =  120 bits (300), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 109/214 (50%), Gaps = 13/214 (6%)

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
           I  G  HT A+ +   + ++G G  G LGHGD     +P  V  L   +     CG  HT
Sbjct: 19  ISAGASHTVALVAGNLVCSWGRGEDGQLGHGDAEDRPMPTFVSALDGCEITSVICGADHT 78

Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
            A  +           S   +++WG G  G+LGHG++    +P  +K    +   ++ACG
Sbjct: 79  TAYSD-----------SRLVVYSWGWGDFGRLGHGNSSDLFIPHAIKTLQGLQIKQIACG 127

Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVV 586
            S  +A+T  G+V S G    GQLG   +    FP R++   +   ++ ++CG  H   +
Sbjct: 128 DSHCLAVTINGEVQSWGRNQNGQLGVGDNIDHSFPQRVKLPAEEEVVQ-VSCGWRHTVAI 186

Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           + KS V++WG+G +GQLGHGD  ++  P L+EAL
Sbjct: 187 TGKSNVFSWGRGTSGQLGHGDILDRNMPVLIEAL 220



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 90/184 (48%), Gaps = 13/184 (7%)

Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
           K ++ S G  HT A+V            +   + +WG G +GQLGHGDAE R +P  V  
Sbjct: 15  KVLLISAGASHTVALV------------AGNLVCSWGRGEDGQLGHGDAEDRPMPTFVSA 62

Query: 516 SDDISFCKVACGHSITIALTATGQV-FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIE 574
            D      V CG   T A + +  V +S G  D+G+LG   S+  F       ++   I+
Sbjct: 63  LDGCEITSVICGADHTTAYSDSRLVVYSWGWGDFGRLGHGNSSDLFIPHAIKTLQGLQIK 122

Query: 575 DIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNF 634
            IACG  H   V+   EV +WG+  NGQLG GDN +   P  V+   +++V  V CG   
Sbjct: 123 QIACGDSHCLAVTINGEVQSWGRNQNGQLGVGDNIDHSFPQRVKLPAEEEVVQVSCGWRH 182

Query: 635 TAAI 638
           T AI
Sbjct: 183 TVAI 186



 Score = 60.1 bits (144), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 63/120 (52%), Gaps = 3/120 (2%)

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYH 582
           ++ G S T+AL A   V S G  + GQLG   +  +  PT +   +    I  + CG+ H
Sbjct: 19  ISAGASHTVALVAGNLVCSWGRGEDGQLGHGDAEDRPMPTFVSA-LDGCEITSVICGADH 77

Query: 583 IAVVS-SKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
               S S+  VY+WG G  G+LGHG++ +   P  ++ L+  Q+K + CG +   A+ ++
Sbjct: 78  TTAYSDSRLVVYSWGWGDFGRLGHGNSSDLFIPHAIKTLQGLQIKQIACGDSHCLAVTIN 137


>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
           gorilla gorilla]
          Length = 982

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 164/347 (47%), Gaps = 35/347 (10%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDA 344
           LP+ +++   L    ++CG +H++ V  +G++F+WG GS G+LG G   ++S+ PK I  
Sbjct: 65  LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKITT 124

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGL 403
           LNG  I  V+CG +H+ A++    +++WG   H  G LG   E  S   P++V   +EG+
Sbjct: 125 LNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQASPQRVRS-LEGI 181

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR---SSTSVPREVETLKELKTVMA 460
            ++ +  G  H+ A++  G  F +G  + G L    R   + ++ P  +  LK L  V  
Sbjct: 182 PLAQVAAGGTHSFALSLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYI 241

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
           SCG  HTA + +              K+FT+GD   GQLG+     +  P  V+  D + 
Sbjct: 242 SCGDEHTAVLTQ------------DGKVFTFGDNCSGQLGYSPTPEKRGPQLVERIDGL- 288

Query: 521 FCKVACGHSITIALT-ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
             ++ CG   T+A    TGQV S G         P  T K PT  E   ++    DI+C 
Sbjct: 289 VSQIDCGSYHTLAYVHTTGQVVSFGHG-------PSDTSK-PTHPEALTENF---DISCL 337

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP--TLVEALRDKQ 624
                +V  + +    G  AN    H D  +   P  TL E  R  Q
Sbjct: 338 ISAEDLVDVQVKHIFAGTYANFVTTHQDTSSTHAPGKTLPEISRISQ 384



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 170/351 (48%), Gaps = 36/351 (10%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G +H++L+    ++ S G+ S G+LG         P+ I AL    + +V+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSL 88

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV   G ++ WG G      +G+  EIS + P+K++  + G++I  + CG +H+ A++  
Sbjct: 89  AVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIT-TLNGIKIIQVSCGHYHSLALSKD 146

Query: 422 GKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            ++F++G  + G LG G +  S + P+ V +L+ +     + G  H+ A+  + G +   
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGTHSFAL-SLCGTS--- 202

Query: 481 NGLSSKKLFTWGDGAEGQL---GHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
                   F WG  + GQL   G         PL +    ++    ++CG   T  LT  
Sbjct: 203 --------FGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVVYISCGDEHTAVLTQD 254

Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPT---RIEGNIKHRYIEDIACGSYH-IAVVSSKSEV 592
           G+VF+ G    GQLG SP    + P    RI+G      +  I CGSYH +A V +  +V
Sbjct: 255 GKVFTFGDNCSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQV 309

Query: 593 YTWGKGAN--GQLGHGD--NENKQTPTLVEA--LRDKQVKSVVCGS--NFT 635
            ++G G +   +  H +   EN     L+ A  L D QVK +  G+  NF 
Sbjct: 310 VSFGHGPSDTSKPTHPEALTENFDISCLISAEDLVDVQVKHIFAGTYANFV 360



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 123/303 (40%), Gaps = 70/303 (23%)

Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
           + R+ +    G ++     G  H+  + +  ++ + GD + G LG        +P  ++ 
Sbjct: 12  LQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA 71

Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVP 510
           L+ L   + SCG  H+ A+                ++F WG G+EGQLG G+  E    P
Sbjct: 72  LETLIVDLVSCGKEHSLAVCH------------KGRVFAWGAGSEGQLGIGEFKEISFTP 119

Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG---------SP------- 554
             +   + I   +V+CGH  ++AL+   QVFS G   +GQLG         SP       
Sbjct: 120 KKITTLNGIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLE 179

Query: 555 ---------GSTGKFPTRIEGN-------------------------------IKHRYIE 574
                    G T  F   + G                                +K+  + 
Sbjct: 180 GIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIGALKNLGVV 239

Query: 575 DIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNF 634
            I+CG  H AV++   +V+T+G   +GQLG+     K+ P LVE + D  V  + CGS  
Sbjct: 240 YISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSPTPEKRGPQLVERI-DGLVSQIDCGSYH 298

Query: 635 TAA 637
           T A
Sbjct: 299 TLA 301


>gi|149701724|ref|XP_001494887.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Equus
           caballus]
          Length = 988

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 127/255 (49%), Gaps = 18/255 (7%)

Query: 225 TADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDA 284
           T ++ R+SL S     S   CH      G VF WG G    L  G V G+  +       
Sbjct: 42  TLETLRVSLVSCGQEHSLAVCHR-----GRVFAWGAGSEGQLGTGEVKGINFT------- 89

Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLID 343
             PK +++   +    ++CG  H++ +++ GQ+FSWG+ S G+LG G E      P+ + 
Sbjct: 90  --PKKIKTLTGIKIIQVSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVR 147

Query: 344 ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG-IHNLGLLGQVSEISHWIPRKVSGQMEG 402
           +L G  +  VA G  H+ A+++SG  + WG+     L L G    +  + PR + G +  
Sbjct: 148 SLEGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSI-GALRN 206

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
           L +  I CG  HTA +T  GK+FTFGD + G LGH   +    P+ VE +  L + +  C
Sbjct: 207 LGVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRGPQLVERIDGLVSQI-DC 265

Query: 463 GVWHTAAIVEVAGKT 477
           G +HT A V   G+ 
Sbjct: 266 GSYHTLAYVYTTGQV 280



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 151/284 (53%), Gaps = 22/284 (7%)

Query: 267 LGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGG 326
           LG +V+ +  S++   +   P+ + +   L    ++CG +H++ V  +G++F+WG GS G
Sbjct: 17  LGFSVDFMPPSNSPLEETKNPEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEG 76

Query: 327 KLGHGVEADVSY-PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           +LG G    +++ PK I  L G  I  V+CG++H+ A++  G +++WG   ++ G LG  
Sbjct: 77  QLGTGEVKGINFTPKKIKTLTGIKIIQVSCGDYHSLALSEGGQVFSWGK--NSQGQLGLG 134

Query: 386 SEI-SHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL---GHGDRS 441
            E  S   P++V   +EG+ ++ +  G  H+ A++ +G  F +G+ + G L   G+    
Sbjct: 135 KEFPSQDSPQRVRS-LEGIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPV 193

Query: 442 STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH 501
            +  PR +  L+ L  +  SCG  HTA + +        NG    K+FT+GD + GQLGH
Sbjct: 194 QSYKPRSIGALRNLGVIYISCGYEHTAVLTQ--------NG----KVFTFGDNSCGQLGH 241

Query: 502 GDAEPRVVPLCVKVSDDISFCKVACGHSITIA-LTATGQVFSMG 544
             +     P  V+  D +   ++ CG   T+A +  TGQV S G
Sbjct: 242 SPSAQDRGPQLVERIDGL-VSQIDCGSYHTLAYVYTTGQVVSFG 284



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 129/249 (51%), Gaps = 18/249 (7%)

Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGD-RSSTSVPREVETLKELKTV 458
           +E L++S + CG  H+ A+   G++F +G G+ G LG G+ +     P++++TL  +K +
Sbjct: 43  LETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKIKTLTGIKII 102

Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP-RVVPLCVKVSD 517
             SCG +H+ A+ E              ++F+WG  ++GQLG G   P +  P  V+  +
Sbjct: 103 QVSCGDYHSLALSE------------GGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLE 150

Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGS---TGKFPTRIEGNIKHRYIE 574
            I   +VA G + + AL+ +G  F  G+   GQL   G+      +  R  G +++  + 
Sbjct: 151 GIPLAQVAAGGAHSFALSVSGTSFGWGNNSAGQLALSGNNVPVQSYKPRSIGALRNLGVI 210

Query: 575 DIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNF 634
            I+CG  H AV++   +V+T+G  + GQLGH  +   + P LVE + D  V  + CGS  
Sbjct: 211 YISCGYEHTAVLTQNGKVFTFGDNSCGQLGHSPSAQDRGPQLVERI-DGLVSQIDCGSYH 269

Query: 635 TAAICLHKG 643
           T A     G
Sbjct: 270 TLAYVYTTG 278



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 4/132 (3%)

Query: 510 PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KF-PTRIEGN 567
           P  ++  + +    V+CG   ++A+   G+VF+ G+   GQLG+    G  F P +I+  
Sbjct: 37  PEPIRTLETLRVSLVSCGQEHSLAVCHRGRVFAWGAGSEGQLGTGEVKGINFTPKKIKTL 96

Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG-DNENKQTPTLVEALRDKQVK 626
              + I+ ++CG YH   +S   +V++WGK + GQLG G +  ++ +P  V +L    + 
Sbjct: 97  TGIKIIQ-VSCGDYHSLALSEGGQVFSWGKNSQGQLGLGKEFPSQDSPQRVRSLEGIPLA 155

Query: 627 SVVCGSNFTAAI 638
            V  G   + A+
Sbjct: 156 QVAAGGAHSFAL 167


>gi|302804628|ref|XP_002984066.1| hypothetical protein SELMODRAFT_40379 [Selaginella moellendorffii]
 gi|300148418|gb|EFJ15078.1| hypothetical protein SELMODRAFT_40379 [Selaginella moellendorffii]
          Length = 1023

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 181/417 (43%), Gaps = 72/417 (17%)

Query: 203 SVSKSLNF---VASGGLDDANSRSSTADS---FRISL-SSAVSSSSQGSCHEDFDGLGDV 255
           S+ ++L+F     +G L D  +  S  DS     + L S  V  +   SC      L ++
Sbjct: 73  SLHRALHFGHLAVAGALVDGGASVSLDDSKGRLPVDLVSGPVKQAVAPSCRV---VLKEL 129

Query: 256 FIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQG 315
           F WG G  N  LG    G++          +P  +E+    D   ++    H+  V   G
Sbjct: 130 FSWGNG-SNYQLGTGTAGIQ---------RVPCRVETLHGADIVRVSAAKFHSTAVNSSG 179

Query: 316 QIFSWGEGSGGKLGH---GVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           Q+FSWG G GG+LGH     E  V  P+ +  L G  +  VA  + HT   T  G++YTW
Sbjct: 180 QLFSWGYGRGGRLGHEDYSGEVAVIAPRQVTGLCGRRVKNVAAAKHHTIVATEGGEVYTW 239

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           G   +  G LG  +  +   PR+VS      ++  +     H+AA+T +G+++T+G    
Sbjct: 240 G--TNREGQLGYPAVDTQSTPRRVSTLRA--KVVEVAAANKHSAAVTESGEVYTWGCNKD 295

Query: 433 GALGHGDRSSTS--VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
           G LG+G  +S S  VPR V+ LK  K +  S    HT  IVE              ++FT
Sbjct: 296 GQLGYGTSNSASNCVPRVVDYLKGRKALAISAAKRHTVVIVET-------------EVFT 342

Query: 491 WGDGAEGQLGHGDAEPRVV------------PLCVKVSDDISFCKVACGHSITIALTATG 538
           WG        H    PR V            PL   +S+ +    VA G   + A+ A G
Sbjct: 343 WG--------HKMVSPRRVVLVRNTKKAGQHPLKFHLSERLHIVAVAAGVVHSTAIAADG 394

Query: 539 QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
            +FS  SAD  QL +         ++     H  +  ++ G Y  AV +S  +VY W
Sbjct: 395 LIFSWLSAD-PQLHA--------QQVLTMTGHHAVS-VSAGKYRTAVATSTGDVYAW 441



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 28/227 (12%)

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           +LF++G+G+   LG G      VP  VETL     V  S   +H+ A+            
Sbjct: 128 ELFSWGNGSNYQLGTGTAGIQRVPCRVETLHGADIVRVSAAKFHSTAVN----------- 176

Query: 483 LSSKKLFTWGDGAEGQLGHGD--------AEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
            SS +LF+WG G  G+LGH D        A  +V  LC +         VA     TI  
Sbjct: 177 -SSGQLFSWGYGRGGRLGHEDYSGEVAVIAPRQVTGLCGR-----RVKNVAAAKHHTIVA 230

Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
           T  G+V++ G+   GQLG P    +   R    ++ + +E +A  + H A V+   EVYT
Sbjct: 231 TEGGEVYTWGTNREGQLGYPAVDTQSTPRRVSTLRAKVVE-VAAANKHSAAVTESGEVYT 289

Query: 595 WGKGANGQLGHGDNENKQ--TPTLVEALRDKQVKSVVCGSNFTAAIC 639
           WG   +GQLG+G + +     P +V+ L+ ++  ++      T  I 
Sbjct: 290 WGCNKDGQLGYGTSNSASNCVPRVVDYLKGRKALAISAAKRHTVVIV 336



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 6/158 (3%)

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
           K+LF+WG+G+  QLG G A  + VP  V+        +V+     + A+ ++GQ+FS G 
Sbjct: 127 KELFSWGNGSNYQLGTGTAGIQRVPCRVETLHGADIVRVSAAKFHSTAVNSSGQLFSWGY 186

Query: 546 ADYGQLGSPGSTGKF----PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
              G+LG    +G+     P ++ G +  R ++++A   +H  V +   EVYTWG    G
Sbjct: 187 GRGGRLGHEDYSGEVAVIAPRQVTG-LCGRRVKNVAAAKHHTIVATEGGEVYTWGTNREG 245

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
           QLG+   + + TP  V  LR K V+ V   +  +AA+ 
Sbjct: 246 QLGYPAVDTQSTPRRVSTLRAKVVE-VAAANKHSAAVT 282


>gi|431898775|gb|ELK07147.1| X-linked retinitis pigmentosa GTPase regulator [Pteropus alecto]
          Length = 1019

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 161/341 (47%), Gaps = 33/341 (9%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           +ACG +H  ++T   +++ +G  + G+LG G  + VS P  + AL    +   ACG  HT
Sbjct: 85  LACGDEHTAIITGNNKLYMFGSNNWGQLGLGSRSTVSKPTCVKALKPEKVKFAACGRNHT 144

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
             +T  G +Y  G        LG   + + + P  +       Q+  +  G   +AA+T 
Sbjct: 145 LVLTEEGKVYAAGGNNEGQLGLGDTEDRNTFHP--ICFFTSQHQLKQLSAGSNTSAALTV 202

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            G LF +GD + G +G  +  +  VP +V   K +  +  SCG +H +A V + G     
Sbjct: 203 DGNLFMWGDNSEGQIGLKNVPNVCVPHQVTVGKPIAWI--SCGYYH-SAFVTMEG----- 254

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI-----SFCKVACGHSITIALT 535
                 +L+T+G+   G+LG     PR + +  KV   +        +VACG   T+ LT
Sbjct: 255 ------ELYTFGETECGKLGL----PRQLLMNHKVPQLVPGIPEKVIQVACGGGHTVVLT 304

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPT---RIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
               V++ G   +GQLG    T  F T   +I   IK + I  I+CG  H A+++    +
Sbjct: 305 EKA-VYTFGLGQFGQLGL--GTFIFETAEPKILEPIKDQKIIYISCGENHTALITDVGLM 361

Query: 593 YTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
           YT+G G +G+LG G  +  N+  PTL        V+ V CG
Sbjct: 362 YTFGDGRHGKLGLGMENFTNQFIPTLCSNFLRFMVELVACG 402



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 86/276 (31%), Positives = 126/276 (45%), Gaps = 50/276 (18%)

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
           + CG  HTA IT   KL+ FG   +G LG G RS+ S P  V+ LK  K   A+CG  HT
Sbjct: 85  LACGDEHTAIITGNNKLYMFGSNNWGQLGLGSRSTVSKPTCVKALKPEKVKFAACGRNHT 144

Query: 468 AAIVE------VAGKTSGSNGLSSKK---------------------------------- 487
             + E        G   G  GL   +                                  
Sbjct: 145 LVLTEEGKVYAAGGNNEGQLGLGDTEDRNTFHPICFFTSQHQLKQLSAGSNTSAALTVDG 204

Query: 488 -LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
            LF WGD +EGQ+G  +     VP  V V   I++  ++CG+  +  +T  G++++ G  
Sbjct: 205 NLFMWGDNSEGQIGLKNVPNVCVPHQVTVGKPIAW--ISCGYYHSAFVTMEGELYTFGET 262

Query: 547 DYGQLGSPGS---TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           + G+LG P       K P  + G I  + I+ +ACG  H  V++ K+ VYT+G G  GQL
Sbjct: 263 ECGKLGLPRQLLMNHKVPQLVPG-IPEKVIQ-VACGGGHTVVLTEKA-VYTFGLGQFGQL 319

Query: 604 GHGDN-ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G G        P ++E ++D+++  + CG N TA I
Sbjct: 320 GLGTFIFETAEPKILEPIKDQKIIYISCGENHTALI 355



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 150/298 (50%), Gaps = 35/298 (11%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDALNGSNIHMVACGEFHT 360
           ACG  H +++T++G++++ G  + G+LG G   D  ++  +    +   +  ++ G   +
Sbjct: 138 ACGRNHTLVLTEEGKVYAAGGNNEGQLGLGDTEDRNTFHPICFFTSQHQLKQLSAGSNTS 197

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T+ G+L+ WGD  ++ G +G  +  +  +P +V+    G  I+ I CG +H+A +T 
Sbjct: 198 AALTVDGNLFMWGD--NSEGQIGLKNVPNVCVPHQVTV---GKPIAWISCGYYHSAFVTM 252

Query: 421 AGKLFTFGDGTFGALGHGDR--SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
            G+L+TFG+   G LG   +   +  VP+ V  + E K +  +CG  HT  + E      
Sbjct: 253 EGELYTFGETECGKLGLPRQLLMNHKVPQLVPGIPE-KVIQVACGGGHTVVLTE------ 305

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHG-----DAEPRVV-PLCVKVSDDISFCKVACGHSITI 532
                  K ++T+G G  GQLG G      AEP+++ P+      D     ++CG + T 
Sbjct: 306 -------KAVYTFGLGQFGQLGLGTFIFETAEPKILEPI-----KDQKIIYISCGENHTA 353

Query: 533 ALTATGQVFSMGSADYGQ--LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
            +T  G +++ G   +G+  LG    T +F   +  N     +E +ACG  H+ V ++
Sbjct: 354 LITDVGLMYTFGDGRHGKLGLGMENFTNQFIPTLCSNFLRFMVELVACGGCHMIVFAT 411


>gi|330797026|ref|XP_003286564.1| hypothetical protein DICPUDRAFT_77429 [Dictyostelium purpureum]
 gi|325083469|gb|EGC36921.1| hypothetical protein DICPUDRAFT_77429 [Dictyostelium purpureum]
          Length = 1440

 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 167/362 (46%), Gaps = 55/362 (15%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           ++SWG+G  G   H +  D  YP     L   N+  ++ G  H+ A+ ++ +   WG+  
Sbjct: 4   LYSWGKGKTGNTCHNI--DKKYPSPPSVLISLNLDQLSIGPNHSAAI-VNNECLMWGE-- 58

Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
               ++G+     H    K+  +    ++ S+ CG  HT  +TS  K+F+ G    G LG
Sbjct: 59  ----VMGR----KHTTLFKIVWKR---RVVSVSCGFNHTLLLTSEYKIFSMGFNQVGQLG 107

Query: 437 HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
             +   ++VP  V+TL++   +    G   +AAI +               L+ WG  + 
Sbjct: 108 IENVVDSAVPLPVDTLQKCNVIKIKAGNNISAAITDKG------------DLYIWGTSSF 155

Query: 497 GQLGHGDAEPR---VVPLCV------------KVSDDISFCKVACGHSITIALTATGQVF 541
           GQLG+G   P+    +P  +             +  +I +  V  G   TIA++ TG +F
Sbjct: 156 GQLGNGKMNPKSNQFIPTTILEPFISEQEKDNPIYQNIQYSNVCFGAQHTIAVSTTGTIF 215

Query: 542 SMGSADYGQLGSPGSTGKF-PTRIEGNIKH--RYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           S GS  YGQLG      K  P  +  N +H  R + DIA G++H ++++ + +VY WG  
Sbjct: 216 SWGSNQYGQLGLGHCNTKLVPVPVRFN-RHSTRIVVDIASGNFHSSLLTLEGDVYLWGSN 274

Query: 599 ANGQLGHGDNENKQTPTLVE-ALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRN 657
             GQLG GD  +   P  V+ ++  K++  +  G+N T  I L K     D  + +   N
Sbjct: 275 QYGQLGQGDTIDLNVPKKVKGSIEFKKINRMALGNNHT--ILLTK-----DQDVYTFGNN 327

Query: 658 QF 659
           +F
Sbjct: 328 EF 329



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 151/332 (45%), Gaps = 57/332 (17%)

Query: 256 FIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQG 315
            +WGE +G                 R+   L K++    V+   S++CG  H +L+T + 
Sbjct: 54  LMWGEVMG-----------------RKHTTLFKIVWKRRVV---SVSCGFNHTLLLTSEY 93

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           +IFS G    G+LG     D + P  +D L   N+  +  G   + A+T  GDLY WG  
Sbjct: 94  KIFSMGFNQVGQLGIENVVDSAVPLPVDTLQKCNVIKIKAGNNISAAITDKGDLYIWGTS 153

Query: 376 IHNLGLLG---QVSEISHWIP-----------RKVSGQMEGLQISSICCGPWHTAAITSA 421
             + G LG      + + +IP            K +   + +Q S++C G  HT A+++ 
Sbjct: 154 --SFGQLGNGKMNPKSNQFIPTTILEPFISEQEKDNPIYQNIQYSNVCFGAQHTIAVSTT 211

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G +F++G   +G LG G  ++  VP  V   +             T  +V++A     S+
Sbjct: 212 GTIFSWGSNQYGQLGLGHCNTKLVPVPVRFNRH-----------STRIVVDIASGNFHSS 260

Query: 482 GLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV---ACGHSITIALTAT 537
            L+ +  ++ WG    GQLG GD     VP  VK S  I F K+   A G++ TI LT  
Sbjct: 261 LLTLEGDVYLWGSNQYGQLGQGDTIDLNVPKKVKGS--IEFKKINRMALGNNHTILLTKD 318

Query: 538 GQVFSMGSADYGQLGSPGSTGK----FPTRIE 565
             V++ G+ ++ QLG     GK    FPT I+
Sbjct: 319 QDVYTFGNNEFYQLGHGSMGGKNKIYFPTLIQ 350



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 170/388 (43%), Gaps = 59/388 (15%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           ++ WG+G           G    + D++    P VL   + L+   ++ G  H+  +   
Sbjct: 4   LYSWGKG---------KTGNTCHNIDKKYPSPPSVL---ISLNLDQLSIGPNHSAAIV-N 50

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
            +   WGE  G K  H     + + + + +        V+CG  HT  +T    +++ G 
Sbjct: 51  NECLMWGEVMGRK--HTTLFKIVWKRRVVS--------VSCGFNHTLLLTSEYKIFSMG- 99

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
             + +G LG  + +   +P  V   ++   +  I  G   +AAIT  G L+ +G  +FG 
Sbjct: 100 -FNQVGQLGIENVVDSAVPLPVD-TLQKCNVIKIKAGNNISAAITDKGDLYIWGTSSFGQ 157

Query: 435 LGHGD---RSSTSVPREV------------ETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
           LG+G    +S+  +P  +               + ++      G  HT A+      T+G
Sbjct: 158 LGNGKMNPKSNQFIPTTILEPFISEQEKDNPIYQNIQYSNVCFGAQHTIAV-----STTG 212

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS--FCKVACGHSITIALTAT 537
           +       +F+WG    GQLG G    ++VP+ V+ +   +     +A G+  +  LT  
Sbjct: 213 T-------IFSWGSNQYGQLGLGHCNTKLVPVPVRFNRHSTRIVVDIASGNFHSSLLTLE 265

Query: 538 GQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           G V+  GS  YGQLG   +     P +++G+I+ + I  +A G+ H  +++   +VYT+G
Sbjct: 266 GDVYLWGSNQYGQLGQGDTIDLNVPKKVKGSIEFKKINRMALGNNHTILLTKDQDVYTFG 325

Query: 597 KGANGQLGHGDNENKQT---PTLVEALR 621
                QLGHG    K     PTL++  R
Sbjct: 326 NNEFYQLGHGSMGGKNKIYFPTLIQKPR 353



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 13/154 (8%)

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
           K L++WG G  G   H   +    P  V +S ++    +   HS  I      +    G 
Sbjct: 2   KVLYSWGKGKTGNTCHNIDKKYPSPPSVLISLNLDQLSIGPNHSAAIV---NNECLMWGE 58

Query: 546 ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
                       G+  T +   +  R +  ++CG  H  +++S+ ++++ G    GQLG 
Sbjct: 59  V----------MGRKHTTLFKIVWKRRVVSVSCGFNHTLLLTSEYKIFSMGFNQVGQLGI 108

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            +  +   P  V+ L+   V  +  G+N +AAI 
Sbjct: 109 ENVVDSAVPLPVDTLQKCNVIKIKAGNNISAAIT 142


>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
           guttata]
          Length = 526

 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 149/295 (50%), Gaps = 21/295 (7%)

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF-HTCAVTLS 366
            +  T+  ++F  G    G LG G       P+ +D+L G  I  ++ G   H    T  
Sbjct: 34  VLYATENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEE 93

Query: 367 GDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
           G++YTWG   HN    LG  +    ++P +VS  +   ++  + CG  H+  +TS G+++
Sbjct: 94  GEVYTWG---HNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVY 150

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTAAIVEVAGKTSGSNGLS 484
           T+G    G +G G  ++  +PR V +  + K V+  +CG   + A+VE        NG  
Sbjct: 151 TWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVE--------NG-- 200

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
             +++ WG    GQLG G +  +  P  +     I   +VACG++ T+ LT  GQ+++ G
Sbjct: 201 --EVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 258

Query: 545 SADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKS-EVYTWGK 597
           +  YGQLG+   + + +PT +  + K R IE  AC S H +   ++S +VY WG+
Sbjct: 259 ANSYGQLGTGNKSNQSYPTTVVVD-KDRVIEIAACHSAHTSAAKTQSGQVYMWGQ 312



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 25/276 (9%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGS----KHAVLVTKQGQIFSWGEGSGGKLGHG 331
           + + D +  + P+ L+S   L  + IAC S     H VL T++G++++WG  +  +LG+G
Sbjct: 54  LGTGDMQSTIEPRRLDS---LCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNG 110

Query: 332 VEADVSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH 390
                  P  +   L    +  VACG  H+  +T  G++YTW  G +N G +G  S  + 
Sbjct: 111 TTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTW--GYNNSGQVGSGSTANQ 168

Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
            IPR+V+  ++   + +I CG   + A+   G+++ +G    G LG G   +   P  + 
Sbjct: 169 PIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIA 228

Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
            L+ ++    +CG  HT  + +              +++ WG  + GQLG G+   +  P
Sbjct: 229 ALQGIRVQRVACGYAHTLVLTD------------EGQIYAWGANSYGQLGTGNKSNQSYP 276

Query: 511 LCVKVSDDISFCKVACGHS--ITIALTATGQVFSMG 544
             V V  D    ++A  HS   + A T +GQV+  G
Sbjct: 277 TTVVVDKD-RVIEIAACHSAHTSAAKTQSGQVYMWG 311



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 109/225 (48%), Gaps = 19/225 (8%)

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           T   ++F  G    G LG GD  ST  PR +++L   K    S G      +    G+  
Sbjct: 38  TENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGE-- 95

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI---SFCKVACGHSITIALT 535
                    ++TWG  A  QLG+G      VP   +VS ++      +VACG   ++ LT
Sbjct: 96  ---------VYTWGHNAYSQLGNGTTNHGFVP--CQVSTNLVNKKVIEVACGSHHSMVLT 144

Query: 536 ATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
           + G+V++ G  + GQ+GS GST     P R+   ++++ + +IACG      V    EVY
Sbjct: 145 SDGEVYTWGYNNSGQVGS-GSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVY 203

Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            WG   NGQLG G + N+ TP  + AL+  +V+ V CG   T  +
Sbjct: 204 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVL 248



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 116/234 (49%), Gaps = 25/234 (10%)

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAA 469
           GP H    T  G+++T+G   +  LG+G  +   VP +V T L   K +  +CG  H+  
Sbjct: 84  GP-HVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMV 142

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVA 525
           +             S  +++TWG    GQ+G G       PR V  C++    ++   +A
Sbjct: 143 LT------------SDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVN---IA 187

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHI 583
           CG   ++A+   G+V+  G    GQLG  GS+G  PT  RI   ++   ++ +ACG  H 
Sbjct: 188 CGQMCSMAVVENGEVYVWGYNGNGQLGL-GSSGNQPTPCRIAA-LQGIRVQRVACGYAHT 245

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            V++ + ++Y WG  + GQLG G+  N+  PT V   +D+ ++   C S  T+A
Sbjct: 246 LVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTSA 299



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 124/241 (51%), Gaps = 24/241 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+V+ WG    + L  G  N   +      + +  KV+E         +ACGS H++++T
Sbjct: 94  GEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIE---------VACGSHHSMVLT 144

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYT 371
             G++++WG  + G++G G  A+   P+ + + L    +  +ACG+  + AV  +G++Y 
Sbjct: 145 SDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYV 204

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   +  G LG  S  +   P +++  ++G+++  + CG  HT  +T  G+++ +G  +
Sbjct: 205 WG--YNGNGQLGLGSSGNQPTPCRIAA-LQGIRVQRVACGYAHTLVLTDEGQIYAWGANS 261

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           +G LG G++S+ S P  V   K+    +A+C   HT+     A KT       S +++ W
Sbjct: 262 YGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTS-----AAKT------QSGQVYMW 310

Query: 492 G 492
           G
Sbjct: 311 G 311


>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
          Length = 531

 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 149/295 (50%), Gaps = 21/295 (7%)

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF-HTCAVTLS 366
            +  T+  ++F  G    G LG G       P+ +D+L G  I  ++ G   H    T  
Sbjct: 39  VLYATENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEE 98

Query: 367 GDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
           G++YTWG   HN    LG  +    ++P +VS  +   ++  + CG  H+  +TS G+++
Sbjct: 99  GEVYTWG---HNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVY 155

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTAAIVEVAGKTSGSNGLS 484
           T+G    G +G G  ++  +PR V +  + K V+  +CG   + A+VE        NG  
Sbjct: 156 TWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVE--------NG-- 205

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
             +++ WG    GQLG G +  +  P  +     I   +VACG++ T+ LT  GQ+++ G
Sbjct: 206 --EVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 263

Query: 545 SADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKS-EVYTWGK 597
           +  YGQLG+   + + +PT +  + K R IE  AC S H +   ++S +VY WG+
Sbjct: 264 ANSYGQLGTGNKSNQSYPTTVVVD-KDRVIEIAACHSAHTSAAKTQSGQVYMWGQ 317



 Score =  107 bits (268), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 25/276 (9%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGS----KHAVLVTKQGQIFSWGEGSGGKLGHG 331
           + + D +  + P+ L+S   L  + IAC S     H VL T++G++++WG  +  +LG+G
Sbjct: 59  LGTGDMQSTIEPRRLDS---LCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNG 115

Query: 332 VEADVSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH 390
                  P  +   L    +  VACG  H+  +T  G++YTW  G +N G +G  S  + 
Sbjct: 116 TTNHGFVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTW--GYNNSGQVGSGSTANQ 173

Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
            IPR+V+  ++   + +I CG   + A+   G+++ +G    G LG G   +   P  + 
Sbjct: 174 PIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIA 233

Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
            L+ ++    +CG  HT  + +              +++ WG  + GQLG G+   +  P
Sbjct: 234 ALQGIRVQRVACGYAHTLVLTD------------EGQIYAWGANSYGQLGTGNKSNQSYP 281

Query: 511 LCVKVSDDISFCKVACGHS--ITIALTATGQVFSMG 544
             V V  D    ++A  HS   + A T +GQV+  G
Sbjct: 282 TTVVVDKD-RVIEIAACHSAHTSAAKTQSGQVYMWG 316



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 109/225 (48%), Gaps = 19/225 (8%)

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           T   ++F  G    G LG GD  ST  PR +++L   K    S G      +    G+  
Sbjct: 43  TENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHVVLATEEGE-- 100

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI---SFCKVACGHSITIALT 535
                    ++TWG  A  QLG+G      VP   +VS ++      +VACG   ++ LT
Sbjct: 101 ---------VYTWGHNAYSQLGNGTTNHGFVP--CQVSTNLVNKKVIEVACGSHHSMVLT 149

Query: 536 ATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
           + G+V++ G  + GQ+GS GST     P R+   ++++ + +IACG      V    EVY
Sbjct: 150 SDGEVYTWGYNNSGQVGS-GSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVY 208

Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            WG   NGQLG G + N+ TP  + AL+  +V+ V CG   T  +
Sbjct: 209 VWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVL 253



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 116/234 (49%), Gaps = 25/234 (10%)

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAA 469
           GP H    T  G+++T+G   +  LG+G  +   VP +V T L   K +  +CG  H+  
Sbjct: 89  GP-HVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMV 147

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVA 525
           +             S  +++TWG    GQ+G G       PR V  C++    ++   +A
Sbjct: 148 LT------------SDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVN---IA 192

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHI 583
           CG   ++A+   G+V+  G    GQLG  GS+G  PT  RI   ++   ++ +ACG  H 
Sbjct: 193 CGQMCSMAVVENGEVYVWGYNGNGQLGL-GSSGNQPTPCRIAA-LQGIRVQRVACGYAHT 250

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            V++ + ++Y WG  + GQLG G+  N+  PT V   +D+ ++   C S  T+A
Sbjct: 251 LVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTSA 304



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 124/241 (51%), Gaps = 24/241 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+V+ WG    + L  G  N   +      + +  KV+E         +ACGS H++++T
Sbjct: 99  GEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIE---------VACGSHHSMVLT 149

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYT 371
             G++++WG  + G++G G  A+   P+ + + L    +  +ACG+  + AV  +G++Y 
Sbjct: 150 SDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEVYV 209

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   +  G LG  S  +   P +++  ++G+++  + CG  HT  +T  G+++ +G  +
Sbjct: 210 WG--YNGNGQLGLGSSGNQPTPCRIAA-LQGIRVQRVACGYAHTLVLTDEGQIYAWGANS 266

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           +G LG G++S+ S P  V   K+    +A+C   HT+     A KT       S +++ W
Sbjct: 267 YGQLGTGNKSNQSYPTTVVVDKDRVIEIAACHSAHTS-----AAKT------QSGQVYMW 315

Query: 492 G 492
           G
Sbjct: 316 G 316


>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus laevis]
 gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
          Length = 526

 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 156/305 (51%), Gaps = 22/305 (7%)

Query: 299 QSIACGSKHAVL-VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
           Q+   G+ + VL +TK  ++F  G  S G LG G    +  P+ ID L+G  I  ++ G 
Sbjct: 23  QACVFGAGNEVLYITKNDEVFVMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGS 82

Query: 358 F-HTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
             H   VT  G++Y+WG   HN    LG  S      P +VS  +   +  S+ CG  H+
Sbjct: 83  GPHVVIVTSDGEVYSWG---HNAYSQLGNGSTNQALSPCQVSTNLINKKAHSVACGSHHS 139

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVWHTAAIVEVA 474
             +T  G+++ +G    G +G G  ++  +PR+V +  + KTV+  +CG   + A+V+  
Sbjct: 140 MVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVD-- 197

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                 NG    +++ WG    GQLG G +  +  P  +     I   +V CG++ T+AL
Sbjct: 198 ------NG----EVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLAL 247

Query: 535 TATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKS-EV 592
           T  G +++ G+  YGQLG+   + + +P ++  + K R +E  AC S H +   S+S +V
Sbjct: 248 TDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVD-KERIVEIAACHSSHTSAAKSQSGQV 306

Query: 593 YTWGK 597
           Y WG+
Sbjct: 307 YMWGQ 311



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 111/226 (49%), Gaps = 19/226 (8%)

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           IT   ++F  G  + G LG GD  S   PR ++ L   + V  S G      IV      
Sbjct: 36  ITKNDEVFVMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVT----- 90

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK---VACGHSITIAL 534
                 S  ++++WG  A  QLG+G     + P   +VS ++   K   VACG   ++ L
Sbjct: 91  ------SDGEVYSWGHNAYSQLGNGSTNQALSP--CQVSTNLINKKAHSVACGSHHSMVL 142

Query: 535 TATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
           T  G+V++ G  + GQ+GS GST     P ++   ++++ +  IACG      V    EV
Sbjct: 143 TCDGEVYAWGYNNSGQVGS-GSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEV 201

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           Y WG   NGQLG G + N+ TP  + AL+  +V+ VVCG   T A+
Sbjct: 202 YAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLAL 247



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 127/273 (46%), Gaps = 19/273 (6%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGS-KHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           + + D +  + P+ ++        S++ GS  H V+VT  G+++SWG  +  +LG+G   
Sbjct: 53  LGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTN 112

Query: 335 DVSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
               P  +   L     H VACG  H+  +T  G++Y WG   +N G +G  S  +  IP
Sbjct: 113 QALSPCQVSTNLINKKAHSVACGSHHSMVLTCDGEVYAWG--YNNSGQVGSGSTANQPIP 170

Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
           RKV+  ++   +  I CG   + A+   G+++ +G    G LG G   +   P  +  L+
Sbjct: 171 RKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQ 230

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
            ++     CG  HT A+ +               ++ WG  + GQLG G+   +  P+ V
Sbjct: 231 GIRVEQVVCGYAHTLALTD------------EGVMYAWGANSYGQLGTGNKSNQSYPVQV 278

Query: 514 KVSDDISFCKVACGHS--ITIALTATGQVFSMG 544
            V D     ++A  HS   + A + +GQV+  G
Sbjct: 279 IV-DKERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score = 93.2 bits (230), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 127/271 (46%), Gaps = 26/271 (9%)

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW-HTAAITSAGKLFTFGDGTFG 433
           G ++ G LG     S   PR++   + G +I S+  G   H   +TS G+++++G   + 
Sbjct: 46  GTNSSGCLGTGDAQSIIEPRRID-MLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYS 104

Query: 434 ALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            LG+G  +    P +V T L   K    +CG  H+  +                +++ WG
Sbjct: 105 QLGNGSTNQALSPCQVSTNLINKKAHSVACGSHHSMVLT------------CDGEVYAWG 152

Query: 493 DGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
               GQ+G G       PR V  C++    I    +ACG   ++A+   G+V++ G    
Sbjct: 153 YNNSGQVGSGSTANQPIPRKVTSCLQNKTVIG---IACGQMSSMAVVDNGEVYAWGYNGN 209

Query: 549 GQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
           GQLG  GS+G  PT  RI   ++   +E + CG  H   ++ +  +Y WG  + GQLG G
Sbjct: 210 GQLG-LGSSGNQPTPCRIAA-LQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTG 267

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           +  N+  P  V   +++ V+   C S+ T+A
Sbjct: 268 NKSNQSYPVQVIVDKERIVEIAACHSSHTSA 298



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 19/180 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK----VLESTVVLDAQSIACGSKHA 308
           G+V+ WG            N  ++ S    +  +P+     L++  V+    IACG   +
Sbjct: 146 GEVYAWGYN----------NSGQVGSGSTANQPIPRKVTSCLQNKTVI---GIACGQMSS 192

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           + V   G++++WG    G+LG G   +   P  I AL G  +  V CG  HT A+T  G 
Sbjct: 193 MAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGV 252

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +Y W  G ++ G LG  ++ +   P +V    E +   + C     +AA + +G+++ +G
Sbjct: 253 MYAW--GANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310


>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
          Length = 566

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 148/295 (50%), Gaps = 21/295 (7%)

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF-HTCAVTLS 366
            + VT+  ++F  G    G LG G       PK +D+L G  I  ++ G   H    T  
Sbjct: 74  VLYVTENDEVFVLGMNCSGCLGTGDIQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEE 133

Query: 367 GDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
           G++YTWG   HN    LG  +     +P +VS  +   ++  + CG  H+  +TS G+++
Sbjct: 134 GEVYTWG---HNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVY 190

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTAAIVEVAGKTSGSNGLS 484
           T+G    G +G G  ++  +PR V +  + K V+  +CG   + A+VE        NG  
Sbjct: 191 TWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVE--------NG-- 240

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
             +++ WG    GQLG G +  +  P  +     I   +VACG + T+ LT  GQ+++ G
Sbjct: 241 --EVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTDEGQIYAWG 298

Query: 545 SADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKS-EVYTWGK 597
           +  YGQLG+   + + +PT +  + K R +E  AC S H +   ++S +VY WG+
Sbjct: 299 ANSYGQLGTGNKSNQSYPTTVTVD-KDRVVEIAACHSAHTSAAKTQSGQVYMWGQ 352



 Score =  109 bits (272), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 132/276 (47%), Gaps = 25/276 (9%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGS----KHAVLVTKQGQIFSWGEGSGGKLGHG 331
           + + D +  + PK L+S   L  + IAC S     H VL T++G++++WG  +  +LG+G
Sbjct: 94  LGTGDIQSTIEPKRLDS---LCGKKIACLSYGSGPHVVLATEEGEVYTWGHNAYSQLGNG 150

Query: 332 VEADVSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH 390
                  P  +   L    +  VACG  H+  +T  G++YTW  G +N G +G  S  + 
Sbjct: 151 TTNHGLVPCQVSTNLVNKKVIEVACGSHHSMVLTSDGEVYTW--GYNNSGQVGSGSTANQ 208

Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
            IPR+V+  ++   + +I CG   + A+   G+++ +G    G LG G   +   P  + 
Sbjct: 209 PIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIA 268

Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
            L+ ++    +CG  HT  + +              +++ WG  + GQLG G+   +  P
Sbjct: 269 ALQGIRVQRVACGCAHTLVLTD------------EGQIYAWGANSYGQLGTGNKSNQSYP 316

Query: 511 LCVKVSDDISFCKVACGHS--ITIALTATGQVFSMG 544
             V V  D    ++A  HS   + A T +GQV+  G
Sbjct: 317 TTVTVDKD-RVVEIAACHSAHTSAAKTQSGQVYMWG 351



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 111/226 (49%), Gaps = 19/226 (8%)

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +T   ++F  G    G LG GD  ST  P+ +++L   K    S G      +    G+ 
Sbjct: 77  VTENDEVFVLGMNCSGCLGTGDIQSTIEPKRLDSLCGKKIACLSYGSGPHVVLATEEGE- 135

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI---SFCKVACGHSITIAL 534
                     ++TWG  A  QLG+G     +VP   +VS ++      +VACG   ++ L
Sbjct: 136 ----------VYTWGHNAYSQLGNGTTNHGLVP--CQVSTNLVNKKVIEVACGSHHSMVL 183

Query: 535 TATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
           T+ G+V++ G  + GQ+GS GST     P R+   ++++ + +IACG      V    EV
Sbjct: 184 TSDGEVYTWGYNNSGQVGS-GSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEV 242

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           Y WG   NGQLG G + N+ TP  + AL+  +V+ V CG   T  +
Sbjct: 243 YVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVL 288



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 115/234 (49%), Gaps = 25/234 (10%)

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAA 469
           GP H    T  G+++T+G   +  LG+G  +   VP +V T L   K +  +CG  H+  
Sbjct: 124 GP-HVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIEVACGSHHSMV 182

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVA 525
           +             S  +++TWG    GQ+G G       PR V  C++   +     +A
Sbjct: 183 LT------------SDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQ---NKVVVNIA 227

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHI 583
           CG   ++A+   G+V+  G    GQLG  GS+G  PT  RI   ++   ++ +ACG  H 
Sbjct: 228 CGQMCSMAVVENGEVYVWGYNGNGQLGL-GSSGNQPTPCRIAA-LQGIRVQRVACGCAHT 285

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            V++ + ++Y WG  + GQLG G+  N+  PT V   +D+ V+   C S  T+A
Sbjct: 286 LVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVTVDKDRVVEIAACHSAHTSA 339



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 124/241 (51%), Gaps = 24/241 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+V+ WG    + L  G  N   +      + +  KV+E         +ACGS H++++T
Sbjct: 134 GEVYTWGHNAYSQLGNGTTNHGLVPCQVSTNLVNKKVIE---------VACGSHHSMVLT 184

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYT 371
             G++++WG  + G++G G  A+   P+ + + L    +  +ACG+  + AV  +G++Y 
Sbjct: 185 SDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVVVNIACGQMCSMAVVENGEVYV 244

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   +  G LG  S  +   P +++  ++G+++  + CG  HT  +T  G+++ +G  +
Sbjct: 245 WG--YNGNGQLGLGSSGNQPTPCRIAA-LQGIRVQRVACGCAHTLVLTDEGQIYAWGANS 301

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           +G LG G++S+ S P  V   K+    +A+C   HT+     A KT       S +++ W
Sbjct: 302 YGQLGTGNKSNQSYPTTVTVDKDRVVEIAACHSAHTS-----AAKT------QSGQVYMW 350

Query: 492 G 492
           G
Sbjct: 351 G 351


>gi|218199547|gb|EEC81974.1| hypothetical protein OsI_25886 [Oryza sativa Indica Group]
          Length = 907

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 150/337 (44%), Gaps = 24/337 (7%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGEF 358
           +I+    HA  VT+ G++F+ G+ S    GHG V   +  P  I AL G +   VA G  
Sbjct: 159 NISASHNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLS 218

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ-ISSICCGPWHTAA 417
            T  +T  G +YT G   H  G LG    I    P K+    EGL  +  +  G  +T A
Sbjct: 219 FTVILTTDGQVYTCGSNTH--GQLGHGDTIDRATP-KIVELFEGLAPVVQVAAGASYTFA 275

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAG 475
           +T  G +++FG  T   LGHGD+     PR +++ K   +  V  S G  H  A+  +  
Sbjct: 276 VTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALG- 334

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
                       ++TWG G  G LGHGD   +  P  +         +V      T  LT
Sbjct: 335 -----------YVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLT 383

Query: 536 ATGQVFSMGSADYGQLGSP--GSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
             G VF+ G   +G LG P  GS+ K    R+  +++  Y+  I+ G YH   V+++  V
Sbjct: 384 DEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRGIV 443

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVV 629
           + +G     QLG         PT  E +  K ++ +V
Sbjct: 444 FGFGDNERAQLGQEYIRGCLKPT--EIMFQKSMEEIV 478



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 17/222 (7%)

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIVE 472
           H A +T  G++FT GD +    GHG+   T   P E++ LK +     + G+  T  +  
Sbjct: 166 HAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILT- 224

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS-FCKVACGHSIT 531
                      +  +++T G    GQLGHGD   R  P  V++ + ++   +VA G S T
Sbjct: 225 -----------TDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYT 273

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHR--YIEDIACGSYHIAVVSSK 589
            A+T  G V+S GS     LG      +   R   + K R  ++  ++ G  H   + + 
Sbjct: 274 FAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDAL 333

Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
             VYTWG+G  G LGHGD  +K +P L+ +L+  QV   VC 
Sbjct: 334 GYVYTWGRGYCGALGHGDENDKTSPELISSLK-SQVAVQVCA 374



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 153/344 (44%), Gaps = 39/344 (11%)

Query: 232 SLSSAVSSSSQGSCHEDFDGLGDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLP 287
           SLS  V+ S+  +       LG+VF  G+      G+G +G             R    P
Sbjct: 153 SLSRVVNISASHNHAAFVTELGEVFTCGDNSSLCCGHGEVG-------------RTIFRP 199

Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
             +++   +  + +A G    V++T  GQ+++ G  + G+LGHG   D + PK+++   G
Sbjct: 200 TEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEG 259

Query: 348 -SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV-SGQMEGLQI 405
            + +  VA G  +T AVT  G +Y++G   +    LG   +     PR + S +   + +
Sbjct: 260 LAPVVQVAAGASYTFAVTDDGTVYSFGSCTNF--CLGHGDQHDELRPRAIQSFKRRNIHV 317

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
             +  G  H  A+ + G ++T+G G  GALGHGD +  + P  + +LK            
Sbjct: 318 VRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLK------------ 365

Query: 466 HTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLG---HGDAEPRVVPLCVKVSDDISF 521
            +   V+V  +   +  L+ +  +F +G    G LG    G ++  + P  +    D   
Sbjct: 366 -SQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYV 424

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRI 564
            +++ G   T+A+T  G VF  G  +  QLG     G   PT I
Sbjct: 425 SQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEI 468



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 90/196 (45%), Gaps = 4/196 (2%)

Query: 269 GAVNGVEISSADRRDALLPKVLESTVV--LDAQSIACGSKHAVLVTKQGQIFSWGEGSGG 326
           G+     +   D+ D L P+ ++S     +    ++ G +HAV +   G +++WG G  G
Sbjct: 286 GSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCG 345

Query: 327 KLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQV 385
            LGHG E D + P+LI +L       V   +  T  +T  G ++ +G  G  +LG   + 
Sbjct: 346 ALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRG 405

Query: 386 SEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV 445
           S      PR V   +    +S I  G +HT A+T+ G +F FGD     LG         
Sbjct: 406 SSDKVMRPR-VLDSLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLK 464

Query: 446 PREVETLKELKTVMAS 461
           P E+   K ++ ++ +
Sbjct: 465 PTEIMFQKSMEEIVIA 480



 Score = 70.9 bits (172), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 22/235 (9%)

Query: 397 SGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKEL 455
           SG M+      +  G +HT  +  +  +++ G    G LGHG D +  +    V      
Sbjct: 103 SGNMQ------VATGRYHTLLVHDS-SVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLS 155

Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV-PLCVK 514
           + V  S    H A + E+             ++FT GD +    GHG+    +  P  +K
Sbjct: 156 RVVNISASHNHAAFVTELG------------EVFTCGDNSSLCCGHGEVGRTIFRPTEIK 203

Query: 515 VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYI 573
               IS  +VA G S T+ LT  GQV++ GS  +GQLG   +  +  P  +E       +
Sbjct: 204 ALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPV 263

Query: 574 EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSV 628
             +A G+ +   V+    VY++G   N  LGHGD  ++  P  +++ + + +  V
Sbjct: 264 VQVAAGASYTFAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVV 318


>gi|159038541|ref|YP_001537794.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157917376|gb|ABV98803.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 561

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 158/346 (45%), Gaps = 25/346 (7%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           ++A G  H++ VT  G + +WG  S G+LG G     S P  +D   G+ +  VA G+ H
Sbjct: 97  AVAAGQGHSLAVTSAGTVLAWGANSSGQLGDGTTTPRSTPVAVDLPAGTTVTAVAAGDRH 156

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQV----SEISHWIPRKVSGQMEGLQISSICCGPWHT 415
           + AVT +G +  WG     L + GQ+    +  +   P  V     G  ++++  G  H+
Sbjct: 157 SLAVTSTGTVLAWG-----LNVTGQLYDGTTTTNSSTPIVVD-LPAGTTVTAVAAGNAHS 210

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE-TLKELKTVMASCGVWHTAAIVEVA 474
            A+TSAG +  +G  + G LG G  +  S P  V+       + +A+    H+ A+    
Sbjct: 211 LALTSAGTVLAWGANSSGQLGDGTTTPRSTPVAVDLPAGTTISTIAASSSSHSLAVT--- 267

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                    S+  +  WG    GQLG G    R  P+ V +    +   VA G   ++A+
Sbjct: 268 ---------STGTMLAWGANFTGQLGDGTITNRSTPVAVDLPAGTTVTAVATGSGHSLAV 318

Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH-RYIEDIACGSYHIAVVSSKSEVY 593
           T+TG + + G    GQLG  GST    T +  ++     +  +A G+ H   ++S   + 
Sbjct: 319 TSTGTMLAWGGNGSGQLGD-GSTTSSSTPVAVDLPAGTTVTAVAGGAGHSLALTSTGTML 377

Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            WG   +GQLG G   N+ TP   +   D  + ++  GS  + A+ 
Sbjct: 378 AWGFNTSGQLGDGTTSNRSTPIATDLPADTTITAIAGGSFHSLAVV 423



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 108/249 (43%), Gaps = 18/249 (7%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P V++        ++A G+ H++ +T  G + +WG  S G+LG G     S P  +D   
Sbjct: 189 PIVVDLPAGTTVTAVAAGNAHSLALTSAGTVLAWGANSSGQLGDGTTTPRSTPVAVDLPA 248

Query: 347 GSNIHMVACGEF-HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
           G+ I  +A     H+ AVT +G +  WG   +  G LG  +  +   P  V     G  +
Sbjct: 249 GTTISTIAASSSSHSLAVTSTGTMLAWG--ANFTGQLGDGTITNRSTPVAVD-LPAGTTV 305

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
           +++  G  H+ A+TS G +  +G    G LG G  +S+S P  V+          + G  
Sbjct: 306 TAVATGSGHSLAVTSTGTMLAWGGNGSGQLGDGSTTSSSTPVAVDLPAGTTVTAVAGGAG 365

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
           H+ A+             S+  +  WG    GQLG G    R  P+   +  D +   +A
Sbjct: 366 HSLALT------------STGTMLAWGFNTSGQLGDGTTSNRSTPIATDLPADTTITAIA 413

Query: 526 CG--HSITI 532
            G  HS+ +
Sbjct: 414 GGSFHSLAV 422



 Score = 77.4 bits (189), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 82/172 (47%), Gaps = 3/172 (1%)

Query: 307 HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
           H++ VT  G + +WG    G+LG G   + S P  +D   G+ +  VA G  H+ AVT +
Sbjct: 262 HSLAVTSTGTMLAWGANFTGQLGDGTITNRSTPVAVDLPAGTTVTAVATGSGHSLAVTST 321

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
           G +  WG   +  G LG  S  S   P  V     G  ++++  G  H+ A+TS G +  
Sbjct: 322 GTMLAWGG--NGSGQLGDGSTTSSSTPVAVD-LPAGTTVTAVAGGAGHSLALTSTGTMLA 378

Query: 427 FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           +G  T G LG G  S+ S P   +   +      + G +H+ A+V  A  T+
Sbjct: 379 WGFNTSGQLGDGTTSNRSTPIATDLPADTTITAIAGGSFHSLAVVPSASTTT 430



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 94/222 (42%), Gaps = 18/222 (8%)

Query: 403 LQISSICCGPWHTAAITSA-----GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
           L ++S+   P     + SA     G    +GD     LG G  ++ S P  V+   +   
Sbjct: 36  LGVTSVGAAPVLAQGVPSAAAGPPGTGLAWGDNAESQLGDGTTTNRSTPVTVDLPADTTI 95

Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
              + G  H+ A+             S+  +  WG  + GQLG G   PR  P+ V +  
Sbjct: 96  TAVAAGQGHSLAVT------------SAGTVLAWGANSSGQLGDGTTTPRSTPVAVDLPA 143

Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH-RYIEDI 576
             +   VA G   ++A+T+TG V + G    GQL    +T    T I  ++     +  +
Sbjct: 144 GTTVTAVAAGDRHSLAVTSTGTVLAWGLNVTGQLYDGTTTTNSSTPIVVDLPAGTTVTAV 203

Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
           A G+ H   ++S   V  WG  ++GQLG G    + TP  V+
Sbjct: 204 AAGNAHSLALTSAGTVLAWGANSSGQLGDGTTTPRSTPVAVD 245



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 3/153 (1%)

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
             WGD AE QLG G    R  P+ V +  D +   VA G   ++A+T+ G V + G+   
Sbjct: 63  LAWGDNAESQLGDGTTTNRSTPVTVDLPADTTITAVAAGQGHSLAVTSAGTVLAWGANSS 122

Query: 549 GQLGSPGSTGKFPTRIEGNIKH-RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG- 606
           GQLG  G+T    T +  ++     +  +A G  H   V+S   V  WG    GQL  G 
Sbjct: 123 GQLGD-GTTTPRSTPVAVDLPAGTTVTAVAAGDRHSLAVTSTGTVLAWGLNVTGQLYDGT 181

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
              N  TP +V+      V +V  G+  + A+ 
Sbjct: 182 TTTNSSTPIVVDLPAGTTVTAVAAGNAHSLALT 214



 Score = 51.2 bits (121), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 14/157 (8%)

Query: 209 NFVASGGLDDAN-SRSSTADSFRISLSSAVSSSSQGSCHE-DFDGLGDVFIWGEGLGNGL 266
           NF  +G L D   +  ST  +  +   + V++ + GS H       G +  WG G G+G 
Sbjct: 278 NF--TGQLGDGTITNRSTPVAVDLPAGTTVTAVATGSGHSLAVTSTGTMLAWG-GNGSGQ 334

Query: 267 LGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGG 326
           LG   +G   SS+      LP    +TV     ++A G+ H++ +T  G + +WG  + G
Sbjct: 335 LG---DGSTTSSSTPVAVDLPA--GTTV----TAVAGGAGHSLALTSTGTMLAWGFNTSG 385

Query: 327 KLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAV 363
           +LG G  ++ S P   D    + I  +A G FH+ AV
Sbjct: 386 QLGDGTTSNRSTPIATDLPADTTITAIAGGSFHSLAV 422


>gi|403361228|gb|EJY80312.1| hypothetical protein OXYTRI_22298 [Oxytricha trifallax]
          Length = 855

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 122/253 (48%), Gaps = 22/253 (8%)

Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
           K + +  + + ++++ G  H +L+ K+ ++FS G    G+LGHG E D + P +I  L G
Sbjct: 218 KKINTEYITEFEAVSWGIDHFLLLDKKKRVFSTGFAKYGRLGHGDERDRTKPFMIKELEG 277

Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQ------VSEISHWIPRKVSGQME 401
             I  + CG  H+ AV+  GD+Y+WG G  N G LGQ       S  +  +P+K+    +
Sbjct: 278 KKIVYIQCGMHHSMAVSQDGDVYSWGLG--NGGRLGQGYNDESRSNPNQLLPKKIEFTFD 335

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
             QI ++ CG   +     AG L+T+G G        D    S P     +++ + V  S
Sbjct: 336 DNQIMNVSCGSTISCVAVKAGTLYTWGKGEHEKPKFDDFIEYSSP--FPMIEDKQIVYVS 393

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
           CG  H  A+          NG    +LF WG G EG LGHGD + R+    +   ++   
Sbjct: 394 CGASHVMAL--------DRNG----RLFGWGQGNEGCLGHGDCKKRLSVCPISFFENKRC 441

Query: 522 CKVACGHSITIAL 534
             VACG   T+ +
Sbjct: 442 IDVACGDKFTVVI 454



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/384 (23%), Positives = 166/384 (43%), Gaps = 64/384 (16%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSN----IHMVAC 355
           +  G  H +L+ ++G++FS+GEG  G++G G +   +  P  +   +G+     I  ++ 
Sbjct: 91  VEAGLSHTLLLNRRGEVFSFGEGLQGQVGIGQKTIHLQKPTQLYLESGAKECQKIKKISA 150

Query: 356 GEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSE------ISHWIPRK-----VSGQMEGL 403
             F++ A + +G L+ WG      LGL   + +      +   +  K     +  Q+E  
Sbjct: 151 SGFNSAAFSKTGRLWVWGGTQRGKLGLSQMIRDQLEPLNVEFEVQNKEKENGIETQLEVF 210

Query: 404 ----------------QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPR 447
                           +  ++  G  H   +    ++F+ G   +G LGHGD    + P 
Sbjct: 211 LDENKNHKKINTEYITEFEAVSWGIDHFLLLDKKKRVFSTGFAKYGRLGHGDERDRTKPF 270

Query: 448 EVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG-DAEP 506
            ++ L+  K V   CG+ H+ A+ +               +++WG G  G+LG G + E 
Sbjct: 271 MIKELEGKKIVYIQCGMHHSMAVSQDGD------------VYSWGLGNGGRLGQGYNDES 318

Query: 507 R-----VVPLCVKVS-DDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF 560
           R     ++P  ++ + DD     V+CG +I+      G +++ G  ++          KF
Sbjct: 319 RSNPNQLLPKKIEFTFDDNQIMNVSCGSTISCVAVKAGTLYTWGKGEH-------EKPKF 371

Query: 561 PTRIEGNIKHRYIED-----IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPT 615
              IE +     IED     ++CG+ H+  +     ++ WG+G  G LGHGD + + +  
Sbjct: 372 DDFIEYSSPFPMIEDKQIVYVSCGASHVMALDRNGRLFGWGQGNEGCLGHGDCKKRLSVC 431

Query: 616 LVEALRDKQVKSVVCGSNFTAAIC 639
            +    +K+   V CG  FT  I 
Sbjct: 432 PISFFENKRCIDVACGDKFTVVIA 455



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 91/201 (45%), Gaps = 15/201 (7%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS-- 337
           DR    + K LE   ++    I CG  H++ V++ G ++SWG G+GG+LG G   +    
Sbjct: 265 DRTKPFMIKELEGKKIV---YIQCGMHHSMAVSQDGDVYSWGLGNGGRLGQGYNDESRSN 321

Query: 338 ----YPKLID-ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI 392
                PK I+   + + I  V+CG   +C    +G LYTWG G H         E S   
Sbjct: 322 PNQLLPKKIEFTFDDNQIMNVSCGSTISCVAVKAGTLYTWGKGEHEKPKFDDFIEYSSPF 381

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
           P      +E  QI  + CG  H  A+   G+LF +G G  G LGHGD         +   
Sbjct: 382 P-----MIEDKQIVYVSCGASHVMALDRNGRLFGWGQGNEGCLGHGDCKKRLSVCPISFF 436

Query: 453 KELKTVMASCGVWHTAAIVEV 473
           +  + +  +CG   T  I EV
Sbjct: 437 ENKRCIDVACGDKFTVVIAEV 457



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 68/135 (50%), Gaps = 15/135 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQ--SIACGSKHAVL 310
           GDV+ WG G G G LG   N    S+ ++   LLPK +E T   D Q  +++CGS  + +
Sbjct: 297 GDVYSWGLGNG-GRLGQGYNDESRSNPNQ---LLPKKIEFTFD-DNQIMNVSCGSTISCV 351

Query: 311 VTKQGQIFSWGEG--SGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
             K G +++WG+G     K    +E    +P + D      I  V+CG  H  A+  +G 
Sbjct: 352 AVKAGTLYTWGKGEHEKPKFDDFIEYSSPFPMIED----KQIVYVSCGASHVMALDRNGR 407

Query: 369 LYTWGDGIHNLGLLG 383
           L+ WG G  N G LG
Sbjct: 408 LFGWGQG--NEGCLG 420



 Score = 39.7 bits (91), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 5/95 (5%)

Query: 515 VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTRI---EGNIK 569
           V     F +V  G S T+ L   G+VFS G    GQ+G    T     PT++    G  +
Sbjct: 82  VKKRYEFVQVEAGLSHTLLLNRRGEVFSFGEGLQGQVGIGQKTIHLQKPTQLYLESGAKE 141

Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
            + I+ I+   ++ A  S    ++ WG    G+LG
Sbjct: 142 CQKIKKISASGFNSAAFSKTGRLWVWGGTQRGKLG 176


>gi|302753302|ref|XP_002960075.1| hypothetical protein SELMODRAFT_163545 [Selaginella moellendorffii]
 gi|300171014|gb|EFJ37614.1| hypothetical protein SELMODRAFT_163545 [Selaginella moellendorffii]
          Length = 1051

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 180/417 (43%), Gaps = 72/417 (17%)

Query: 203 SVSKSLNF---VASGGLDDANSRSSTADS---FRISL-SSAVSSSSQGSCHEDFDGLGDV 255
           S+ ++L+F     +G L D  +  S  DS     + L S  V  +   SC      L ++
Sbjct: 94  SLHRALHFGHLAVAGALVDGGASVSLDDSKGRLPVDLVSGPVKQAVTPSCRV---VLKEL 150

Query: 256 FIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQG 315
           F WG G  N  LG    G++          +P  +E+    D   ++    H+  V   G
Sbjct: 151 FSWGNG-SNYQLGTGSAGIQ---------RVPCRVETLHGADIVRVSAAKFHSTAVNSSG 200

Query: 316 QIFSWGEGSGGKLGH---GVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           Q+FSWG G GG+LGH     E  V  P+ +  L G  +  VA  + HT   T  G++YTW
Sbjct: 201 QLFSWGYGRGGRLGHEDYSGEVAVIAPRQVTGLCGRRVKNVAAAKHHTIVATEGGEVYTW 260

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           G   +  G LG  +  +   PR+VS      ++  +     H+AA+T +G+++T+G    
Sbjct: 261 G--TNREGQLGYPAVDTQSTPRRVSTLRA--KVVEVAAANKHSAAVTESGEVYTWGCNKD 316

Query: 433 GALGHGDRSSTS--VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
           G LG+G  +S S  VPR V+ LK  K +  S    HT  IVE              ++FT
Sbjct: 317 GQLGYGTSNSASNCVPRVVDYLKGRKALTISAAKRHTVVIVET-------------EVFT 363

Query: 491 WGDGAEGQLGHGDAEPRVV------------PLCVKVSDDISFCKVACGHSITIALTATG 538
           WG        H    PR V            PL   +S+ +    VA G   + A+ A G
Sbjct: 364 WG--------HKMVSPRRVVLVRNTKKAGQHPLKFHLSERLHIVAVAAGVVHSTAIAADG 415

Query: 539 QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
            +FS  SAD      P    +    + G+    +   ++ G Y  AV +S  +VY W
Sbjct: 416 LIFSWLSAD------PQLHAQQVLTMTGH----HALSVSAGKYRTAVATSTGDVYAW 462



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 104/227 (45%), Gaps = 28/227 (12%)

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           +LF++G+G+   LG G      VP  VETL     V  S   +H+ A+            
Sbjct: 149 ELFSWGNGSNYQLGTGSAGIQRVPCRVETLHGADIVRVSAAKFHSTAVN----------- 197

Query: 483 LSSKKLFTWGDGAEGQLGHGD--------AEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
            SS +LF+WG G  G+LGH D        A  +V  LC +         VA     TI  
Sbjct: 198 -SSGQLFSWGYGRGGRLGHEDYSGEVAVIAPRQVTGLCGR-----RVKNVAAAKHHTIVA 251

Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
           T  G+V++ G+   GQLG P    +   R    ++ + +E +A  + H A V+   EVYT
Sbjct: 252 TEGGEVYTWGTNREGQLGYPAVDTQSTPRRVSTLRAKVVE-VAAANKHSAAVTESGEVYT 310

Query: 595 WGKGANGQLGHGDNENKQ--TPTLVEALRDKQVKSVVCGSNFTAAIC 639
           WG   +GQLG+G + +     P +V+ L+ ++  ++      T  I 
Sbjct: 311 WGCNKDGQLGYGTSNSASNCVPRVVDYLKGRKALTISAAKRHTVVIV 357



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 6/158 (3%)

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
           K+LF+WG+G+  QLG G A  + VP  V+        +V+     + A+ ++GQ+FS G 
Sbjct: 148 KELFSWGNGSNYQLGTGSAGIQRVPCRVETLHGADIVRVSAAKFHSTAVNSSGQLFSWGY 207

Query: 546 ADYGQLGSPGSTGKF----PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
              G+LG    +G+     P ++ G +  R ++++A   +H  V +   EVYTWG    G
Sbjct: 208 GRGGRLGHEDYSGEVAVIAPRQVTG-LCGRRVKNVAAAKHHTIVATEGGEVYTWGTNREG 266

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
           QLG+   + + TP  V  LR K V+ V   +  +AA+ 
Sbjct: 267 QLGYPAVDTQSTPRRVSTLRAKVVE-VAAANKHSAAVT 303


>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 407

 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 161/338 (47%), Gaps = 27/338 (7%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++ GS H++ +   G + +WG+   G+LG G   D   P  +  LN  N+  +A G +H+
Sbjct: 63  VSGGSFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQVKDLN--NVTAIAGGAWHS 120

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T  G ++TWG   +  G LG  +  S   P +V+       I++I     H  A+ S
Sbjct: 121 VALTSDGTVWTWGS--NWAGQLGDGTTKSRNKPVQVNNLKN---ITAIASKGLHNLALKS 175

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            G ++T+G   +G LG G  +  + P +  +L  + ++  + G +H+     +A K  G+
Sbjct: 176 DGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLNTIISI--AGGGYHS-----LAQKADGT 228

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
                  ++TWG    GQLG G    R +P+ V    D+S  +  CG   +I L   G +
Sbjct: 229 -------IWTWGLNQYGQLGDGTITNRTIPVLVNGIKDVSMIR--CGGDHSIVLKNNGTI 279

Query: 541 FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
           +  G   +GQLG   +  +      G++K+  I  I  G  H  ++ S   V+TWG   N
Sbjct: 280 WIWGFNQHGQLGDRSTDNRSTPVPMGDLKN--IMTIDGGGDHSLILKSDGTVWTWGNNEN 337

Query: 601 GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           GQLG G   ++ TP  ++A     V ++  G   + A+
Sbjct: 338 GQLGDGTTMSRATP--IQASTLSNVTAIASGEQHSIAL 373



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 176/388 (45%), Gaps = 40/388 (10%)

Query: 233 LSSAVSSSSQGSCHE-DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLE 291
            +S +   S GS H       G V  WG+ + +G LG   N       DR+  +  K L 
Sbjct: 56  FASTILQVSGGSFHSIALKSDGTVLTWGQNM-HGQLGDGTN------TDRKIPVQVKDLN 108

Query: 292 STVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH 351
                +  +IA G+ H+V +T  G +++WG    G+LG G     + P  ++ L   NI 
Sbjct: 109 -----NVTAIAGGAWHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNKPVQVNNL--KNIT 161

Query: 352 MVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ-ISSICC 410
            +A    H  A+   G ++TWG  I+  G LG  +       R    Q   L  I SI  
Sbjct: 162 AIASKGLHNLALKSDGTVWTWGRNIY--GQLGDGTTTD----RNTPVQTRSLNTIISIAG 215

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
           G +H+ A  + G ++T+G   +G LG G  ++ ++P  V  +K++   M  CG  H+  +
Sbjct: 216 GGYHSLAQKADGTIWTWGLNQYGQLGDGTITNRTIPVLVNGIKDVS--MIRCGGDHSIVL 273

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
                K +G+       ++ WG    GQLG    + R  P  V + D  +   +  G   
Sbjct: 274 -----KNNGT-------IWIWGFNQHGQLGDRSTDNRSTP--VPMGDLKNIMTIDGGGDH 319

Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           ++ L + G V++ G+ + GQLG  G+T    T I+ +     +  IA G  H   + S  
Sbjct: 320 SLILKSDGTVWTWGNNENGQLGD-GTTMSRATPIQASTLSN-VTAIASGEQHSIALKSDG 377

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVE 618
            ++ WG   NGQLG G   N+ TP LV+
Sbjct: 378 TIWAWGSNRNGQLGDGSISNRSTPVLVK 405



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 138/303 (45%), Gaps = 33/303 (10%)

Query: 213 SGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVN 272
           +G L D  ++S        +L +  + +S+G  +      G V+ WG  +  G LG    
Sbjct: 137 AGQLGDGTTKSRNKPVQVNNLKNITAIASKGLHNLALKSDGTVWTWGRNI-YGQLG---- 191

Query: 273 GVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGV 332
             + ++ DR   +  + L + +     SIA G  H++     G I++WG    G+LG G 
Sbjct: 192 --DGTTTDRNTPVQTRSLNTII-----SIAGGGYHSLAQKADGTIWTWGLNQYGQLGDGT 244

Query: 333 EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI 392
             + + P L++ +   ++ M+ CG  H+  +  +G ++ WG   H  G LG  S  +   
Sbjct: 245 ITNRTIPVLVNGI--KDVSMIRCGGDHSIVLKNNGTIWIWGFNQH--GQLGDRSTDNRST 300

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
           P  + G ++   I +I  G  H+  + S G ++T+G+   G LG G   S + P +  TL
Sbjct: 301 PVPM-GDLK--NIMTIDGGGDHSLILKSDGTVWTWGNNENGQLGDGTTMSRATPIQASTL 357

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC 512
             +  +  + G  H+ A+     K+ G+       ++ WG    GQLG G    R  P+ 
Sbjct: 358 SNVTAI--ASGEQHSIAL-----KSDGT-------IWAWGSNRNGQLGDGSISNRSTPVL 403

Query: 513 VKV 515
           VK+
Sbjct: 404 VKI 406


>gi|145483825|ref|XP_001427935.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124395018|emb|CAK60537.1| unnamed protein product [Paramecium tetraurelia]
          Length = 887

 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 145/325 (44%), Gaps = 49/325 (15%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLD----AQSIACGSKHAVL 310
           +F+  EGL N    G ++ +     D  D    +   +    D     ++I  G KH V 
Sbjct: 41  LFVIEEGLDNQ---GIISTLHSPEHDEYDQTFSQDSHNLQSFDFKGSIKTIVTGKKHTVF 97

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           ++ QG I+S+G G  G LGHG   ++  PK I  +  S +  +ACGE+HT A++ +GDL+
Sbjct: 98  LSDQGDIYSYGYGEYGALGHGGIIELPIPKKIIRI--SKVDTIACGEYHTLALS-NGDLF 154

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            WG G    G LG   ++               +I  I CG +H+ A+   G L+ +G+ 
Sbjct: 155 AWGRGFE--GQLGIRKDVETAASPMFLSYFYKNKIQLIACGAYHSLAVDQQGALYGWGEA 212

Query: 431 TFGALGHGDRSSTSVPREVETLKE-------------------LKTVMASCGVWHTAAIV 471
            FG LG G + S  +P  ++   E                    + V  S G  H+AA+ 
Sbjct: 213 RFGQLGTGRKVSEQLPSRIDFPPEQPMNQSELRVGKFLPQETSFQVVSISGGYGHSAAVT 272

Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS------FCKVA 525
                       S+ +L+TWG    GQLG+GD + +      ++  DIS      F KV 
Sbjct: 273 ------------STGELYTWGFNQRGQLGNGDKDKKSSYYPKRLMQDISGIQLPGFNKVM 320

Query: 526 CGHSITIALTATGQVFSMGSADYGQ 550
           CG+  T A+   G ++S G  + G 
Sbjct: 321 CGYYTTYAIDQKGGLWSWGGGNLGH 345



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 118/260 (45%), Gaps = 41/260 (15%)

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           I +I  G  HT  ++  G ++++G G +GALGHG      +P+++  + ++ T+  +CG 
Sbjct: 85  IKTIVTGKKHTVFLSDQGDIYSYGYGEYGALGHGGIIELPIPKKIIRISKVDTI--ACGE 142

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCK 523
           +HT A             LS+  LF WG G EGQLG   D E    P+ +          
Sbjct: 143 YHTLA-------------LSNGDLFAWGRGFEGQLGIRKDVETAASPMFLSYFYKNKIQL 189

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRY---------- 572
           +ACG   ++A+   G ++  G A +GQLG+      + P+RI+   +             
Sbjct: 190 IACGAYHSLAVDQQGALYGWGEARFGQLGTGRKVSEQLPSRIDFPPEQPMNQSELRVGKF 249

Query: 573 --------IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ 624
                   +  I+ G  H A V+S  E+YTWG    GQLG+GD + K +      ++D  
Sbjct: 250 LPQETSFQVVSISGGYGHSAAVTSTGELYTWGFNQRGQLGNGDKDKKSSYYPKRLMQDIS 309

Query: 625 ------VKSVVCGSNFTAAI 638
                    V+CG   T AI
Sbjct: 310 GIQLPGFNKVMCGYYTTYAI 329



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 142/323 (43%), Gaps = 48/323 (14%)

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
           I  +  G+ HT  ++  GD+Y++G G +  G LG    I   IP+K+   +   ++ +I 
Sbjct: 85  IKTIVTGKKHTVFLSDQGDIYSYGYGEY--GALGHGGIIELPIPKKI---IRISKVDTIA 139

Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALG-HGDRSSTSVPREVETLKELKTVMASCGVWHTA 468
           CG +HT A+ S G LF +G G  G LG   D  + + P  +    + K  + +CG +H+ 
Sbjct: 140 CGEYHTLAL-SNGDLFAWGRGFEGQLGIRKDVETAASPMFLSYFYKNKIQLIACGAYHSL 198

Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK-------------- 514
           A+ +               L+ WG+   GQLG G      +P  +               
Sbjct: 199 AVDQQGA------------LYGWGEARFGQLGTGRKVSEQLPSRIDFPPEQPMNQSELRV 246

Query: 515 ---VSDDISF--CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK---FPTRIEG 566
              +  + SF    ++ G+  + A+T+TG++++ G    GQLG+     K   +P R+  
Sbjct: 247 GKFLPQETSFQVVSISGGYGHSAAVTSTGELYTWGFNQRGQLGNGDKDKKSSYYPKRLMQ 306

Query: 567 NIKHRYI---EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDK 623
           +I    +     + CG Y    +  K  +++WG    G LGH +++    P  +  L D+
Sbjct: 307 DISGIQLPGFNKVMCGYYTTYAIDQKGGLWSWG---GGNLGHQNDKLVDLPRKI-VLEDR 362

Query: 624 QVKSVVCGSNFTAAICLHKGVSI 646
           +  ++       A     + +S+
Sbjct: 363 KFTNMYANGQAAAFFASLRTISM 385



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 38/221 (17%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           GD+F WG G   G LG           D   A  P  L        Q IACG+ H++ V 
Sbjct: 151 GDLFAWGRGF-EGQLG--------IRKDVETAASPMFLSYFYKNKIQLIACGAYHSLAVD 201

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLID-----ALNGSNIHM--------------V 353
           +QG ++ WGE   G+LG G +     P  ID      +N S + +              +
Sbjct: 202 QQGALYGWGEARFGQLGTGRKVSEQLPSRIDFPPEQPMNQSELRVGKFLPQETSFQVVSI 261

Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQ--VSEISHWIPRKVSGQMEGLQI---SSI 408
           + G  H+ AVT +G+LYTW  G +  G LG     + S + P+++   + G+Q+   + +
Sbjct: 262 SGGYGHSAAVTSTGELYTW--GFNQRGQLGNGDKDKKSSYYPKRLMQDISGIQLPGFNKV 319

Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV 449
            CG + T AI   G L+++G G    LGH +     +PR++
Sbjct: 320 MCGYYTTYAIDQKGGLWSWGGGN---LGHQNDKLVDLPRKI 357


>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
 gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
          Length = 524

 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 149/324 (45%), Gaps = 21/324 (6%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA---LNGSNIHMVACGE 357
           ++ G+ H++ V   G  ++WG  + G+LG+G     S P L+ A    +G  I  V  G 
Sbjct: 106 VSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGG 165

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM--EGLQISSICCGPWHT 415
           FH+ AV  +GD+Y+WG   +  G LG  + ++  +P KVS      G+  S +  G  H+
Sbjct: 166 FHSLAVGSNGDIYSWG--YNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHS 223

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            AI S GK + +G+   G LG G  S T  P  V     +     S G  H+ A+     
Sbjct: 224 LAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQVSAGDLHSLAV----- 278

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
              GS+G    K + WG+   GQLG+      + P+ V     ++  +V+ G   ++A+ 
Sbjct: 279 ---GSDG----KAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHSLAIG 331

Query: 536 ATGQVFSMGSADYGQLGSPG-STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
           A G  ++ G    GQLG+   +T   P  +       +   I  G  H    +S    YT
Sbjct: 332 ADGNAYAWGLNVNGQLGNNTITTSTVPVMVTAPDGVTFTR-IEAGGLHSLTAASDENTYT 390

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           WG  + GQLG+G ++    P  + 
Sbjct: 391 WGANSFGQLGNGTSDGSLVPVAIS 414



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 148/324 (45%), Gaps = 19/324 (5%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++ G  H++ +   G I++WG  S G+LG+    + S P L+   +G     V+ G  H+
Sbjct: 54  VSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTFTQVSAGADHS 113

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM--EGLQISSICCGPWHTAAI 418
            AV   G+ Y WG   +  G LG  +     +P  VS      G+ IS +  G +H+ A+
Sbjct: 114 LAVGSDGNAYAWGR--NTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMAGGFHSLAV 171

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM---ASCGVWHTAAIVEVAG 475
            S G ++++G    G LG G   ++SVP +V        V     S G  H+ AI     
Sbjct: 172 GSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVSAGDRHSLAI----- 226

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
              GSNG    K + WG+   GQLG G       P  V     +SF +V+ G   ++A+ 
Sbjct: 227 ---GSNG----KTYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQVSAGDLHSLAVG 279

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
           + G+ ++ G+ D GQLG+  +T      +   +    +  ++ G+ H   + +    Y W
Sbjct: 280 SDGKAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAW 339

Query: 596 GKGANGQLGHGDNENKQTPTLVEA 619
           G   NGQLG+        P +V A
Sbjct: 340 GLNVNGQLGNNTITTSTVPVMVTA 363



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 140/303 (46%), Gaps = 27/303 (8%)

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           L G     V+ G  H+ A+   G++Y WG   ++ G LG  S ++  +P  VS   +G+ 
Sbjct: 46  LPGVVFTQVSAGINHSLAMGSDGNIYAWG--YNSSGQLGNNSILNSSVPVLVS-TPDGVT 102

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPR-----EVETLKELKTVM 459
            + +  G  H+ A+ S G  + +G  T G LG+G  + +SVP       V +   +  VM
Sbjct: 103 FTQVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVM 162

Query: 460 ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK---VS 516
           A  G +H+ A+        GSNG     +++WG    GQLG G      VPL V    V 
Sbjct: 163 A--GGFHSLAV--------GSNG----DIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVP 208

Query: 517 DDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT-RIEGNIKHRYIED 575
             ++F +V+ G   ++A+ + G+ ++ G A  GQLG  GS  + P   +           
Sbjct: 209 AGVTFSQVSAGDRHSLAIGSNGKTYAWGEARGGQLG-IGSISRTPAPALVSAPAGVSFTQ 267

Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           ++ G  H   V S  + Y WG   +GQLG+    +   P LV  +    V  V  G++ +
Sbjct: 268 VSAGDLHSLAVGSDGKAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHS 327

Query: 636 AAI 638
            AI
Sbjct: 328 LAI 330



 Score = 45.4 bits (106), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/123 (21%), Positives = 54/123 (43%), Gaps = 2/123 (1%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           ++ +A    +L P ++     L    ++ G+ H++ +   G  ++WG    G+LG+    
Sbjct: 294 QLGNATTTSSLAPVLVSPMGGLAVTQVSAGADHSLAIGADGNAYAWGLNVNGQLGNNTIT 353

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
             + P ++ A +G     +  G  H+       + YTW  G ++ G LG  +     +P 
Sbjct: 354 TSTVPVMVTAPDGVTFTRIEAGGLHSLTAASDENTYTW--GANSFGQLGNGTSDGSLVPV 411

Query: 395 KVS 397
            +S
Sbjct: 412 AIS 414


>gi|410988349|ref|XP_004000448.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Felis
           catus]
          Length = 993

 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 163/345 (47%), Gaps = 41/345 (11%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H  +VT   +++ +G  + G+LG G ++ VS P  + AL    +   ACG  HT
Sbjct: 40  LSCGDEHTAVVTGNKKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEIS--HWIPRKVSGQMEGLQISSICCGPWHTAAI 418
              T  G +Y  G        LG   E +  H I    S      +I  +  G   +AA+
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERNTFHLISFFTSQH----KIKQLSAGSNTSAAL 155

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           T  G+LF +GD + G +G  D ++  VP++V   K +  +  SCG +H+A +      T 
Sbjct: 156 TEDGELFMWGDNSEGQIGLKDVTNVCVPQQVTVGKPISWI--SCGYYHSAFVT-----TE 208

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDA------EPRVVP-LCVKVSDDISFCKVACGHSIT 531
           G       +L+T+G+   G+LG  +        P+ VP +  KV       +VACG   T
Sbjct: 209 G-------ELYTFGEPESGKLGLPNQLLCNHRMPQPVPGIPEKV------VQVACGGGHT 255

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH---RYIEDIACGSYHIAVVSS 588
           + LT    V++ G   +GQLG    T  F T +   I+H   + I  I+CG  H A+++ 
Sbjct: 256 VVLTEKA-VYTFGLGQFGQLGL--GTFLFETSVPKVIEHVKDQKISSISCGENHTALITD 312

Query: 589 KSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
              +YT+G G  G+LG G  +  N+  PTL         + V CG
Sbjct: 313 IGLMYTFGDGRYGKLGLGLENFTNQFLPTLCSHFLRFIAQLVSCG 357



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 142/292 (48%), Gaps = 25/292 (8%)

Query: 352 MVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCG 411
           +++CG+ HT  VT +  LY +G   +N G LG  S+ +   P  V   ++  ++    CG
Sbjct: 39  VLSCGDEHTAVVTGNKKLYMFGS--NNWGQLGLGSKSTVSKPTCVKA-LKPEKVKFAACG 95

Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL-KELKTVMASCGVWHTAAI 470
             HT   T  GK++  G    G LG GD    +    +     + K    S G   +AA+
Sbjct: 96  RNHTLVSTEGGKVYAAGGNNEGQLGLGDTEERNTFHLISFFTSQHKIKQLSAGSNTSAAL 155

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
            E              +LF WGD +EGQ+G  D     VP  V V   IS+  ++CG+  
Sbjct: 156 TE------------DGELFMWGDNSEGQIGLKDVTNVCVPQQVTVGKPISW--ISCGYYH 201

Query: 531 TIALTATGQVFSMGSADYGQLGSPGS---TGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
           +  +T  G++++ G  + G+LG P       + P  + G I  + ++ +ACG  H  V++
Sbjct: 202 SAFVTTEGELYTFGEPESGKLGLPNQLLCNHRMPQPVPG-IPEKVVQ-VACGGGHTVVLT 259

Query: 588 SKSEVYTWGKGANGQLGHGDNE-NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            K+ VYT+G G  GQLG G        P ++E ++D+++ S+ CG N TA I
Sbjct: 260 EKA-VYTFGLGQFGQLGLGTFLFETSVPKVIEHVKDQKISSISCGENHTALI 310



 Score = 47.0 bits (110), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE--ADVSYPKLID 343
           +PKV+E        SI+CG  H  L+T  G ++++G+G  GKLG G+E   +   P L  
Sbjct: 285 VPKVIEHVKDQKISSISCGENHTALITDIGLMYTFGDGRYGKLGLGLENFTNQFLPTLCS 344

Query: 344 ALNGSNIHMVACGEFHTCAVTL 365
                   +V+CG  H     +
Sbjct: 345 HFLRFIAQLVSCGGCHMLVFAV 366


>gi|281347459|gb|EFB23043.1| hypothetical protein PANDA_001337 [Ailuropoda melanoleuca]
          Length = 1199

 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 165/346 (47%), Gaps = 43/346 (12%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H  +VT   +++ +G  + G+LG G ++ V+ P  + AL    +   ACG  HT
Sbjct: 30  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHT 89

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEIS--HWIPRKVSGQMEGLQISSICCGPWHTAAI 418
              T  G +Y  G        LG   E +  H I    S +    +I  +  G   +AA+
Sbjct: 90  LVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQR----KIKQLSAGSNTSAAL 145

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           T  G+LF +GD + G +G  + ++  VP++V   K +  +  SCG +H+A +      T 
Sbjct: 146 TEDGELFMWGDNSEGQIGLKNITNVCVPQQVTVGKPISWI--SCGYYHSAFVT-----TE 198

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI-----SFCKVACGHSITIA 533
           G       +L+T+G+   G+LG     P+ + +  ++   +        +VACG   T+ 
Sbjct: 199 G-------ELYTFGEPESGKLGL----PKQLLVNHRMPQSVPGIPEKVVQVACGGGHTVV 247

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAVVS 587
           LT    V++ G   +GQLG     G F      P  IE +IK   I  I CG  H A+++
Sbjct: 248 LTEKA-VYTFGLGQFGQLG----LGTFLFETPVPKVIE-HIKDLKISSIFCGENHTALIT 301

Query: 588 SKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
               +YT+G G +G+LG G  +  N+ TPTL        V+ V CG
Sbjct: 302 DLGLMYTFGDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACG 347



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 127/276 (46%), Gaps = 50/276 (18%)

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
           + CG  HTA +T   KL+ FG   +G LG G +S+ + P  V+ LK  K   A+CG  HT
Sbjct: 30  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVKFAACGRNHT 89

Query: 468 AAIVE------VAGKTSGSNGL----------------SSKK------------------ 487
               E        G   G  GL                S +K                  
Sbjct: 90  LVSTEGGKVYASGGNNEGQLGLGDTDERNSFHLISFFTSQRKIKQLSAGSNTSAALTEDG 149

Query: 488 -LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
            LF WGD +EGQ+G  +     VP  V V   IS+  ++CG+  +  +T  G++++ G  
Sbjct: 150 ELFMWGDNSEGQIGLKNITNVCVPQQVTVGKPISW--ISCGYYHSAFVTTEGELYTFGEP 207

Query: 547 DYGQLGSPGS---TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           + G+LG P       + P  + G I  + ++ +ACG  H  V++ K+ VYT+G G  GQL
Sbjct: 208 ESGKLGLPKQLLVNHRMPQSVPG-IPEKVVQ-VACGGGHTVVLTEKA-VYTFGLGQFGQL 264

Query: 604 GHGDNE-NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G G        P ++E ++D ++ S+ CG N TA I
Sbjct: 265 GLGTFLFETPVPKVIEHIKDLKISSIFCGENHTALI 300



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 2/79 (2%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE--ADVSYPKLID 343
           +PKV+E    L   SI CG  H  L+T  G ++++G+G  GKLG G+E   +   P L  
Sbjct: 275 VPKVIEHIKDLKISSIFCGENHTALITDLGLMYTFGDGRHGKLGLGLENFTNQFTPTLCS 334

Query: 344 ALNGSNIHMVACGEFHTCA 362
                 + +VACG  HT  
Sbjct: 335 NFLRFIVQLVACGGCHTLV 353


>gi|118396198|ref|XP_001030441.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila]
 gi|89284744|gb|EAR82778.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila
            SB210]
          Length = 1984

 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 147/314 (46%), Gaps = 38/314 (12%)

Query: 297  DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG 356
            + QS++CGS+H + +   GQ+FSWG G GG LGHG E     PK+I+AL G N+  + CG
Sbjct: 1595 NIQSVSCGSEHTLALDYIGQVFSWGNGEGGLLGHGNEDVCPSPKIIEALKGLNVDFIVCG 1654

Query: 357  EFHTCAVTLSGDLYTWGD------GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC 410
              H+  +T +  +Y+WG       GI       +   ++   P++V G +EG+ +  I  
Sbjct: 1655 GLHSLVLTKNRQVYSWGRNEGGQLGIDKKLFTNEKCYLT--TPKRVKGNLEGVGVIQIAA 1712

Query: 411  GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV--MASCGVWHTA 468
            G  H+ A+   G+++ +G    G +G G ++ T    E + + +L  +  +  CG+  + 
Sbjct: 1713 GEAHSLALALNGQVYGWGYNMNGQIGLGMQTDTYPVYEPQLIPKLNKIEKIFCCGLNDSN 1772

Query: 469  AI---VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
             +    E    TS +N +         D  + Q          +P  +     I    V+
Sbjct: 1773 QLGLEKEPIKITSTTNNIL--------DQYKPQDQKRAVTDVFIPKKMDCFHQIPVLHVS 1824

Query: 526  CGHSITIAL----TATGQVFSMGSADYGQL--GSPGSTGKFPTRIEGNIKHRYIEDI--- 576
            CGH+ ++AL    T    +F+ G   +GQL  G  G     P  I       Y++D+   
Sbjct: 1825 CGHNHSLALVVADTKHYMLFAWGMHKHGQLGIGETGQNSSVPRPI------TYLQDVTTY 1878

Query: 577  --ACGSYHIAVVSS 588
              ACGSYH  VV++
Sbjct: 1879 SMACGSYHSLVVAN 1892



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 197/415 (47%), Gaps = 45/415 (10%)

Query: 250  DGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKV---LESTVVLDAQSIACGSK 306
            D +G +F WG+    G +G   +  +   + +     PK+   L+ T+V    S+ACG +
Sbjct: 1497 DAVGVMFSWGQN-TEGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKDTIVT---SVACGYQ 1552

Query: 307  HAVLVTKQGQIFSWGEGSGGKLGHGVE--ADVSYPKLIDALNGSNIHMVACGEFHTCAVT 364
            H+V +T  G + +WG+ S  +LG G +  + V +P  I AL  +NI  V+CG  HT A+ 
Sbjct: 1553 HSVAITYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPAL--TNIQSVSCGSEHTLALD 1610

Query: 365  LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
              G +++WG+G    GLLG  +E     P+ +   ++GL +  I CG  H+  +T   ++
Sbjct: 1611 YIGQVFSWGNG--EGGLLGHGNEDVCPSPKIIEA-LKGLNVDFIVCGGLHSLVLTKNRQV 1667

Query: 425  FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
            +++G    G LG   +  T+    + T K +K  +   GV      +++A   + S  L+
Sbjct: 1668 YSWGRNEGGQLGIDKKLFTNEKCYLTTPKRVKGNLEGVGV------IQIAAGEAHSLALA 1721

Query: 485  -SKKLFTWGDGAEGQLGHGDA-------EPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
             + +++ WG    GQ+G G         EP+++P   K+     FC   CG + +  L  
Sbjct: 1722 LNGQVYGWGYNMNGQIGLGMQTDTYPVYEPQLIPKLNKIEK--IFC---CGLNDSNQLGL 1776

Query: 537  TGQVFSMGSADYGQLGS--PGSTGKFPTRI----EGNIKHRY-IEDIACGSYH-IAVVSS 588
              +   + S     L    P    +  T +    + +  H+  +  ++CG  H +A+V +
Sbjct: 1777 EKEPIKITSTTNNILDQYKPQDQKRAVTDVFIPKKMDCFHQIPVLHVSCGHNHSLALVVA 1836

Query: 589  KSE---VYTWGKGANGQLGHGDN-ENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
             ++   ++ WG   +GQLG G+  +N   P  +  L+D    S+ CGS  +  + 
Sbjct: 1837 DTKHYMLFAWGMHKHGQLGIGETGQNSSVPRPITYLQDVTTYSMACGSYHSLVVA 1891



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 90/184 (48%), Gaps = 24/184 (13%)

Query: 488  LFTWGDGAEGQLGH-GDAEPRVVPLCVKVS--------DDISFCKVACGHSITIALTATG 538
            +F+WG   EGQ+G+  D +  ++   +KV+         D     VACG+  ++A+T  G
Sbjct: 1502 MFSWGQNTEGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKDTIVTSVACGYQHSVAITYAG 1561

Query: 539  QVFSMGSADYGQLG----SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
             V + G   + QLG    SP S   FPT I        I+ ++CGS H   +    +V++
Sbjct: 1562 TVLAWGDNSHSQLGLGEKSPSSV-PFPTPIPALTN---IQSVSCGSEHTLALDYIGQVFS 1617

Query: 595  WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSG 654
            WG G  G LGHG+ +   +P ++EAL+   V  +VCG        LH  V   +  + S 
Sbjct: 1618 WGNGEGGLLGHGNEDVCPSPKIIEALKGLNVDFIVCGG-------LHSLVLTKNRQVYSW 1670

Query: 655  CRNQ 658
             RN+
Sbjct: 1671 GRNE 1674


>gi|281205292|gb|EFA79484.1| ankyrin repeat-containing protein [Polysphondylium pallidum PN500]
          Length = 903

 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 155/316 (49%), Gaps = 32/316 (10%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           +I  G   AV++T  G ++SWG  S GKLGH  + D+S P +I A     I  +ACG+ H
Sbjct: 212 TIKFGQNFAVMLTDTGGVYSWGLCSYGKLGHPTKNDISIPSMISAFKNKQITQIACGKDH 271

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           + A+   G +Y WG+G      LG    +S  IP K+    E  +I+SI CG   + A++
Sbjct: 272 SLALDEIGVVYAWGNGSGGRLGLGNSEVVS--IP-KIIPHFEDEKITSIACGQEFSLALS 328

Query: 420 SAGKLFTFGDGTFGALGHGDRS--STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
            +GK+F++G G  G LG+   +  S S P+ +  L     +  SCG WH+  + +     
Sbjct: 329 DSGKVFSWGKGLHGNLGYDVSTMLSQSTPKVIPMLPPASQI--SCGNWHSMVLSK----- 381

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
                  S  ++T+G   + +LGH G+      P  V++   I   K+  G +    L+ 
Sbjct: 382 -------SGDVYTFGSNIDCRLGHSGNGS---TPTMVQIGSKIK--KIGAGANFNAVLSE 429

Query: 537 TGQVFSMGSADYGQLG-----SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
           +  +++ GS  + QLG         TG+ P  ++  + +  I  I  G  H+ V++   E
Sbjct: 430 SNAIYTWGSNIHCQLGVLLPDHRNYTGE-PQVVKTLLPYP-ISTIEVGYEHVVVLTDTGE 487

Query: 592 VYTWGKGANGQLGHGD 607
           V+T+G  +  Q G G+
Sbjct: 488 VFTFGDNSMMQCGVGE 503



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 130/280 (46%), Gaps = 32/280 (11%)

Query: 281 RRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPK 340
           + D  +P ++ +        IACG  H++ + + G +++WG GSGG+LG G    VS PK
Sbjct: 245 KNDISIPSMISAFKNKQITQIACGKDHSLALDEIGVVYAWGNGSGGRLGLGNSEVVSIPK 304

Query: 341 LIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQ 399
           +I       I  +ACG+  + A++ SG +++WG G+H NLG     + +S   P+ +   
Sbjct: 305 IIPHFEDEKITSIACGQEFSLALSDSGKVFSWGKGLHGNLG-YDVSTMLSQSTPKVIPML 363

Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
               QIS   CG WH+  ++ +G ++TFG      LGH    ST  P  V+   ++K + 
Sbjct: 364 PPASQIS---CGNWHSMVLSKSGDVYTFGSNIDCRLGHSGNGST--PTMVQIGSKIKKIG 418

Query: 460 ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG-------HGDAEPRVVPLC 512
           A  G    A + E            S  ++TWG     QLG       +   EP+V    
Sbjct: 419 A--GANFNAVLSE------------SNAIYTWGSNIHCQLGVLLPDHRNYTGEPQV---- 460

Query: 513 VKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
           VK         +  G+   + LT TG+VF+ G     Q G
Sbjct: 461 VKTLLPYPISTIEVGYEHVVVLTDTGEVFTFGDNSMMQCG 500



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 153/328 (46%), Gaps = 49/328 (14%)

Query: 231 ISLSSAVSSS-----SQGSCHED----FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADR 281
           IS+ S +S+      +Q +C +D     D +G V+ WG G G G LG  +   E+ S   
Sbjct: 248 ISIPSMISAFKNKQITQIACGKDHSLALDEIGVVYAWGNGSG-GRLG--LGNSEVVS--- 301

Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY--P 339
               +PK++         SIACG + ++ ++  G++FSWG+G  G LG+ V   +S   P
Sbjct: 302 ----IPKIIPHFEDEKITSIACGQEFSLALSDSGKVFSWGKGLHGNLGYDVSTMLSQSTP 357

Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSG 398
           K+I  L  ++   ++CG +H+  ++ SGD+YT+G  I   LG  G  S      P  V  
Sbjct: 358 KVIPMLPPAS--QISCGNWHSMVLSKSGDVYTFGSNIDCRLGHSGNGST-----PTMVQ- 409

Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGT---FGALGHGDRSSTSVPREVETLKEL 455
              G +I  I  G    A ++ +  ++T+G       G L    R+ T  P+ V+TL   
Sbjct: 410 --IGSKIKKIGAGANFNAVLSESNAIYTWGSNIHCQLGVLLPDHRNYTGEPQVVKTLLPY 467

Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC-VK 514
                  G  H   + +              ++FT+GD +  Q G G+A   V     VK
Sbjct: 468 PISTIEVGYEHVVVLTDTG------------EVFTFGDNSMMQCGVGEAIKEVCNFTRVK 515

Query: 515 VSDDISFCKVAC-GHSITIALTATGQVF 541
           + D+ +  K+A  G+S  I+L++   ++
Sbjct: 516 IPDNSTVFKIAAGGNSSLISLSSGHNIY 543



 Score = 47.8 bits (112), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 5/95 (5%)

Query: 548 YGQLGSPG----STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           +GQ+  P     +TG  PT +  N K      I  G     +++    VY+WG  + G+L
Sbjct: 182 WGQMLCPSLSLIATGT-PTGVLFNQKEHSPTTIKFGQNFAVMLTDTGGVYSWGLCSYGKL 240

Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           GH    +   P+++ A ++KQ+  + CG + + A+
Sbjct: 241 GHPTKNDISIPSMISAFKNKQITQIACGKDHSLAL 275


>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 1413

 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 165/350 (47%), Gaps = 32/350 (9%)

Query: 291 ESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNI 350
           E+T +  +Q I+ G+ H + +   G +++WG    G+LG     + S P  +  L  +++
Sbjct: 139 ETTFIPRSQ-ISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPVQVSGL--TDV 195

Query: 351 HMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC 410
             +A G +HT A+   G ++ WG+  +  G LG  S      P +VSG  +   + +I  
Sbjct: 196 IAIAGGAYHTIALKSDGTVWAWGN--NEGGQLGDGSTTDRSTPVQVSGLTD---VIAIAG 250

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
           G  HT A+ S G ++ +GD   G LG G  ++ S+P +V  L +               +
Sbjct: 251 GYAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLSD---------------V 295

Query: 471 VEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHS 529
           + +AG  + +  L S   ++ WGD   GQLG G    R  P  VKVS       +A G+S
Sbjct: 296 IAIAGGNAHTIALKSDGTVWAWGDNEGGQLGDGSTTNRSTP--VKVSGLADVIAIAGGYS 353

Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
            TI L + G V++ G  + GQLG   +T +  P ++ G      +  IA G YH   V S
Sbjct: 354 HTIVLRSDGTVWTWGHNEGGQLGDGSTTNRSTPVQVSGLAD---VIAIAGGVYHTIAVKS 410

Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
              ++ WG    GQLG G   N  TP  V  L D  V ++  G   T A+
Sbjct: 411 DGTMWAWGYNWYGQLGDGTTINSSTPVQVNGLTD--VIAIAGGYYHTIAM 458



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 152/322 (47%), Gaps = 33/322 (10%)

Query: 297  DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG 356
            D  +IA G  H + +     +++WG  S G+LG G   + S P  +  L  +NI  +A G
Sbjct: 1090 DVIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTITNRSIPTPVTYL--TNIIAIAGG 1147

Query: 357  EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
              HT A+   G ++ WG   +  G LG  S  +   P +VSG  + + I+       HT 
Sbjct: 1148 YVHTIALKSDGTVWAWG--YNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGEYV---HTV 1202

Query: 417  AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
            A+ S G ++ +G   +G LG G  ++ S P +V  L ++  +  + G  HT A+     K
Sbjct: 1203 ALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDV--IAIAGGYVHTIAL-----K 1255

Query: 477  TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
            + G+       ++TWG    GQLG G    R+ P  V+VS       +A G   TIAL +
Sbjct: 1256 SDGT-------VWTWGWNNSGQLGDGTTINRLTP--VQVSGLTDAIAIAGGDYHTIALKS 1306

Query: 537  TGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIED---IACGSYHIAVVSSKSEV 592
               V++ GS  YGQLG   +  +  P ++ G      + D   IA G YH   + S + V
Sbjct: 1307 DNTVWAWGSNSYGQLGDGTTINRLTPVQVSG------LTDAIAIAGGDYHTIALKSDNTV 1360

Query: 593  YTWGKGANGQLGHGDNENKQTP 614
            + WG  + GQLG     N  TP
Sbjct: 1361 WAWGSNSYGQLGDVSTANSLTP 1382



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 154/326 (47%), Gaps = 29/326 (8%)

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG 356
           DA +IA G  H + +   G +++WG  + G+LG G   + S P  +  L  +++  +A G
Sbjct: 642 DAIAIAGGVYHTIALKSDGTVWTWGWNNSGQLGDGTTINRSTPVQVIGL--TDVIAIAGG 699

Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
           ++HT A+   G ++TWG   +  G LG  +  +   P +V G  +   I +I  G  H+ 
Sbjct: 700 DYHTIALKSDGTVWTWG--FNYYGQLGGGATTNRSTPVQVKGLAD---IIAIAGGYVHSI 754

Query: 417 AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           A+ S G ++ +G   +G LG G  +    P +V  L ++  +  + G  HT A+     K
Sbjct: 755 ALKSDGTVWAWGYNGYGQLGDGSTTDHLTPVQVSGLTDI--IAIAGGYIHTIAL-----K 807

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
           + G+       ++ WG    GQLG G       P+ V    D+        H  TIAL +
Sbjct: 808 SDGT-------VWAWGHNEGGQLGDGTTTNSSTPVQVSGLTDVIAVTARLYH--TIALKS 858

Query: 537 TGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
            G V++ G   YGQLG   +T +  P ++ G      +  IA G YH   + S   V+ W
Sbjct: 859 DGTVWTWGRNIYGQLGDGSTTERSLPVQVIGLTD---VIAIAGGYYHTIALKSDGAVWAW 915

Query: 596 GKGANGQLGHGDNENKQTPTLVEALR 621
           G   N QLG+   +N  TP  V +LR
Sbjct: 916 GYNGNNQLGNWSTKNSSTP--VRSLR 939



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 160/343 (46%), Gaps = 37/343 (10%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+ G+ H + +   G ++++G     +LG G   D S P  +  L  ++   +A G +HT
Sbjct: 596 ISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQVSGL--TDAIAIAGGVYHT 653

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+   G ++TWG   +N G LG  + I+   P +V G  +   + +I  G +HT A+ S
Sbjct: 654 IALKSDGTVWTWG--WNNSGQLGDGTTINRSTPVQVIGLTD---VIAIAGGDYHTIALKS 708

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            G ++T+G   +G LG G  ++ S P +V+ L +               I+ +AG    S
Sbjct: 709 DGTVWTWGFNYYGQLGGGATTNRSTPVQVKGLAD---------------IIAIAGGYVHS 753

Query: 481 NGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
             L S   ++ WG    GQLG G     + P  V+VS       +A G+  TIAL + G 
Sbjct: 754 IALKSDGTVWAWGYNGYGQLGDGSTTDHLTP--VQVSGLTDIIAIAGGYIHTIALKSDGT 811

Query: 540 VFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS---YHIAVVSSKSEVYTW 595
           V++ G  + GQLG   +T    P ++ G      + D+   +   YH   + S   V+TW
Sbjct: 812 VWAWGHNEGGQLGDGTTTNSSTPVQVSG------LTDVIAVTARLYHTIALKSDGTVWTW 865

Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G+   GQLG G    +  P  V  L D  V ++  G   T A+
Sbjct: 866 GRNIYGQLGDGSTTERSLPVQVIGLTD--VIAIAGGYYHTIAL 906



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 159/335 (47%), Gaps = 35/335 (10%)

Query: 293  TVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM 352
            T+ L    I+ G+ H + +   G +++ G    G+LG G   + S P  +  L  +++  
Sbjct: 1036 TIFLPRSQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQVSGL--TDVIA 1093

Query: 353  VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
            +A G++HT A+     ++ WG   ++ G LG  +  +  IP  V+       I +I  G 
Sbjct: 1094 IAGGDYHTIALKSDNTVWAWGS--NSYGQLGDGTITNRSIPTPVTYLTN---IIAIAGGY 1148

Query: 413  WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW-HTAAIV 471
             HT A+ S G ++ +G   +G LG G  ++ S P +V  L +   V+A  G + HT A+ 
Sbjct: 1149 VHTIALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTD---VIAIAGEYVHTVAL- 1204

Query: 472  EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
                K+ G+       ++ WG    GQLG G    R  P  V+VS       +A G+  T
Sbjct: 1205 ----KSDGT-------VWAWGYNGYGQLGDGSTTNRSTP--VQVSGLTDVIAIAGGYVHT 1251

Query: 532  IALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIED---IACGSYHIAVVS 587
            IAL + G V++ G  + GQLG   +  +  P ++ G      + D   IA G YH   + 
Sbjct: 1252 IALKSDGTVWTWGWNNSGQLGDGTTINRLTPVQVSG------LTDAIAIAGGDYHTIALK 1305

Query: 588  SKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRD 622
            S + V+ WG  + GQLG G   N+ TP  V  L D
Sbjct: 1306 SDNTVWAWGSNSYGQLGDGTTINRLTPVQVSGLTD 1340



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 154/371 (41%), Gaps = 67/371 (18%)

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG 356
           D  +IA G+ H + +   G +++WG+  GG+LG G   + S P  +  L  +++  +A G
Sbjct: 294 DVIAIAGGNAHTIALKSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGL--ADVIAIAGG 351

Query: 357 EFHTCAVTLSGDLYTWGDGIHNLG-LLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
             HT  +   G ++TWG   HN G  LG  S  +   P +VSG  +   + +I  G +HT
Sbjct: 352 YSHTIVLRSDGTVWTWG---HNEGGQLGDGSTTNRSTPVQVSGLAD---VIAIAGGVYHT 405

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            A+ S G ++ +G   +G LG G   ++S P +V  L ++  +  + G +HT A+     
Sbjct: 406 IAVKSDGTMWAWGYNWYGQLGDGTTINSSTPVQVNGLTDV--IAIAGGYYHTIAM----- 458

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP---------------------LCVK 514
           K+ G+       ++TWG    GQLG G    R  P                      CV 
Sbjct: 459 KSDGA-------VWTWGFNYYGQLGDGSITNRSTPAQRSLSGMKSVATPTVTTGSATCVS 511

Query: 515 VSDDISFCKVACGHSITIAL----TATGQVF--------SMGSADYG-QLGSPGSTGKFP 561
           +S  +    V      T A     T+TG  F          GS   G  LG       + 
Sbjct: 512 LSSALLNGWVNGNGVATTAWFDYGTSTGMYFDATKTISCGTGSTYVGATLGDLTPWTTYY 571

Query: 562 TRIEG-NIKHRYI---------EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            RI   NI   Y            I+ G+YH   +     V+ +G   N QLG G   + 
Sbjct: 572 CRIASQNIGGIYYGSETTFMPRTQISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDS 631

Query: 612 QTPTLVEALRD 622
            TP  V  L D
Sbjct: 632 STPVQVSGLTD 642



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 149/371 (40%), Gaps = 67/371 (18%)

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP--KLIDALNGSNIHMVA 354
           D  +IA G  H + +   G +++WG    G+LG G   + S P  + +  +       V 
Sbjct: 444 DVIAIAGGYYHTIAMKSDGAVWTWGFNYYGQLGDGSITNRSTPAQRSLSGMKSVATPTVT 503

Query: 355 CGEFHTCAVTLSGDLYTW--GDGIHNLGL-----------------------------LG 383
            G   TC    S  L  W  G+G+                                  LG
Sbjct: 504 TGS-ATCVSLSSALLNGWVNGNGVATTAWFDYGTSTGMYFDATKTISCGTGSTYVGATLG 562

Query: 384 QVSEISHWIPRKVSGQMEGLQISS---------ICCGPWHTAAITSAGKLFTFGDGTFGA 434
            ++  + +  R  S  + G+   S         I  G +HT  +   G ++ +G      
Sbjct: 563 DLTPWTTYYCRIASQNIGGIYYGSETTFMPRTQISAGAYHTLTLKPDGTVWAYGANWNSQ 622

Query: 435 LGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG 494
           LG G  + +S P +V  L +   +  + GV+HT A+     K+ G+       ++TWG  
Sbjct: 623 LGDGSTTDSSTPVQVSGLTD--AIAIAGGVYHTIAL-----KSDGT-------VWTWGWN 668

Query: 495 AEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSP 554
             GQLG G    R  P+ V    D+    +A G   TIAL + G V++ G   YGQLG  
Sbjct: 669 NSGQLGDGTTINRSTPVQVIGLTDV--IAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGG 726

Query: 555 GSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN--GQLGHGDNENK 611
            +T +  P +++G       + IA    ++  ++ KS+   W  G N  GQLG G   + 
Sbjct: 727 ATTNRSTPVQVKG-----LADIIAIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGSTTDH 781

Query: 612 QTPTLVEALRD 622
            TP  V  L D
Sbjct: 782 LTPVQVSGLTD 792


>gi|301117542|ref|XP_002906499.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262107848|gb|EEY65900.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 1711

 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 136/290 (46%), Gaps = 20/290 (6%)

Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLGH-GVEADVSYPKLIDALNGSNIHMVACGEFHTCA 362
           G +H + +T  G  +SWG    G+LGH  +   V  PKLI++L    +   +    H+  
Sbjct: 417 GCEHMIALTDSGLAYSWGYNDRGQLGHENLTTKVHVPKLIESLKDKKLRYASVSYHHSAV 476

Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
           +T SG+LY +G  +++ G LG         P+ V G  EG +IS + CG +HT   T+ G
Sbjct: 477 ITDSGELYAFG--MNDCGQLGLDHTQHQSTPQLVKG-FEGTEISMVACGLYHTIICTATG 533

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
            LF  G   +G LG G      V   V    E+ + +AS G +H+  +            
Sbjct: 534 GLFACGKNDYGQLGLGHNRQIKVASLVSLPNEMVSYVAS-GYYHSVVVT----------- 581

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
            +S + F++G    GQLG G+   + VP  V +S +    +  CG   T+ L+  GQVF 
Sbjct: 582 -NSGRTFSFGRNDYGQLGIGNKVHQNVPNVVALSANTRMVRATCGCYHTVLLSEQGQVFV 640

Query: 543 MGSADYGQLGSPGSTGKF---PTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
            G  + GQLG+ GS       P ++      R   D+A G Y  +++  +
Sbjct: 641 FGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVAAGFYTTSLIVER 690



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 154/338 (45%), Gaps = 22/338 (6%)

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVAC 355
           D + +A G++   ++T  G + + G    G+ G G  +  V   + + AL    +  +A 
Sbjct: 355 DIRQVASGNETLAVLTNDGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAA 414

Query: 356 --GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
             G  H  A+T SG  Y+WG   ++ G LG  +  +     K+   ++  ++        
Sbjct: 415 SNGCEHMIALTDSGLAYSWG--YNDRGQLGHENLTTKVHVPKLIESLKDKKLRYASVSYH 472

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           H+A IT +G+L+ FG    G LG       S P+ V+  +  +  M +CG++HT      
Sbjct: 473 HSAVITDSGELYAFGMNDCGQLGLDHTQHQSTPQLVKGFEGTEISMVACGLYHTIICTAT 532

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITI 532
            G            LF  G    GQLG G + + +V  L    ++ +S+  VA G+  ++
Sbjct: 533 GG------------LFACGKNDYGQLGLGHNRQIKVASLVSLPNEMVSY--VASGYYHSV 578

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
            +T +G+ FS G  DYGQLG      +  P  +  +   R +    CG YH  ++S + +
Sbjct: 579 VVTNSGRTFSFGRNDYGQLGIGNKVHQNVPNVVALSANTRMVR-ATCGCYHTVLLSEQGQ 637

Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVV 629
           V+ +G+   GQLG+  + +   P  ++   +K  +  V
Sbjct: 638 VFVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCV 675



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 148/327 (45%), Gaps = 18/327 (5%)

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           G+++S G+ S G+LG G + +      I      +I  VA G   T AV L+ D      
Sbjct: 321 GELYSCGQNSYGELGTGDDIERHQLTSISLCGWDDIRQVASGN-ETLAV-LTNDGVVLTC 378

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC--GPWHTAAITSAGKLFTFGDGTF 432
           G++  G  GQ       +  +    +   ++  I    G  H  A+T +G  +++G    
Sbjct: 379 GLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDSGLAYSWGYNDR 438

Query: 433 GALGHGDRSS-TSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
           G LGH + ++   VP+ +E+LK+ K   AS    H+A I +            S +L+ +
Sbjct: 439 GQLGHENLTTKVHVPKLIESLKDKKLRYASVSYHHSAVITD------------SGELYAF 486

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           G    GQLG    + +  P  VK  +      VACG   TI  TATG +F+ G  DYGQL
Sbjct: 487 GMNDCGQLGLDHTQHQSTPQLVKGFEGTEISMVACGLYHTIICTATGGLFACGKNDYGQL 546

Query: 552 GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
           G  G   +       ++ +  +  +A G YH  VV++    +++G+   GQLG G+  ++
Sbjct: 547 GL-GHNRQIKVASLVSLPNEMVSYVASGYYHSVVVTNSGRTFSFGRNDYGQLGIGNKVHQ 605

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAI 638
             P +V    + ++    CG   T  +
Sbjct: 606 NVPNVVALSANTRMVRATCGCYHTVLL 632



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 114/230 (49%), Gaps = 16/230 (6%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
           +PK++ES      +  +    H+ ++T  G+++++G    G+LG       S P+L+   
Sbjct: 452 VPKLIESLKDKKLRYASVSYHHSAVITDSGELYAFGMNDCGQLGLDHTQHQSTPQLVKGF 511

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
            G+ I MVACG +HT   T +G L+  G   +    LG   +I   +   VS   E   +
Sbjct: 512 EGTEISMVACGLYHTIICTATGGLFACGKNDYGQLGLGHNRQIK--VASLVSLPNE--MV 567

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
           S +  G +H+  +T++G+ F+FG   +G LG G++   +VP  V      + V A+CG +
Sbjct: 568 SYVASGYYHSVVVTNSGRTFSFGRNDYGQLGIGNKVHQNVPNVVALSANTRMVRATCGCY 627

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
           HT  + E              ++F +G   +GQLG+  +   ++P+ +KV
Sbjct: 628 HTVLLSE------------QGQVFVFGRNNKGQLGNRGSADALLPVPLKV 665



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 131/291 (45%), Gaps = 35/291 (12%)

Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
           A GE ++C     G+L T GD I       Q++ IS      + G  +  Q++S   G  
Sbjct: 319 ASGELYSCGQNSYGELGT-GDDIER----HQLTSIS------LCGWDDIRQVAS---GNE 364

Query: 414 HTAAITSAGKLFTFGDGTFGALGHG---DRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
             A +T+ G + T G    G  G G   +R     P +    + +K + AS G  H  A+
Sbjct: 365 TLAVLTNDGVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIAL 424

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDD--ISFCKVACG 527
            +        +GL+    ++WG    GQLGH +   +V VP  ++   D  + +  V+  
Sbjct: 425 TD--------SGLA----YSWGYNDRGQLGHENLTTKVHVPKLIESLKDKKLRYASVSYH 472

Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
           HS  I  T +G++++ G  D GQLG   +  +   ++    +   I  +ACG YH  + +
Sbjct: 473 HSAVI--TDSGELYAFGMNDCGQLGLDHTQHQSTPQLVKGFEGTEISMVACGLYHTIICT 530

Query: 588 SKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +   ++  GK   GQLG G N   +  +LV +L ++ V  V  G   +  +
Sbjct: 531 ATGGLFACGKNDYGQLGLGHNRQIKVASLV-SLPNEMVSYVASGYYHSVVV 580


>gi|281344276|gb|EFB19860.1| hypothetical protein PANDA_001439 [Ailuropoda melanoleuca]
          Length = 993

 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 149/287 (51%), Gaps = 25/287 (8%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGEFH 359
           IACG  H++ ++K G++F+WG+   G+LG G + A +  P+ ++ L+G  +  ++ G+ H
Sbjct: 111 IACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAGKAH 170

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           + A+++SG++Y+WG   ++LG LG         P  +   ++  Q+  + CG  HTA +T
Sbjct: 171 SMALSMSGNVYSWGR--NDLGQLGLGHTDGEDFPSLIE-TLDNQQVEFLACGGSHTALLT 227

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
           + G +FTFG G +G LGH    +   PR V  L   +    +CG  HT A V   G    
Sbjct: 228 TDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDLG---- 283

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV--SDDISF-CKVACGHSITIALTA 536
                  K+F++G G EGQLG+G    +++PL +K+  ++++ F  + +    + IA   
Sbjct: 284 -------KVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKFESRTSDKELVMIAGGN 336

Query: 537 TGQVFSMGSAD-YGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
              +  M   + Y  L       K PT  EG +K R+I D+    + 
Sbjct: 337 QSVLLWMEKKNPYVNLRR-----KIPTLNEGTVK-RWIADVGTKQWQ 377



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 151/338 (44%), Gaps = 37/338 (10%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
           +   S+  G++H ++++  G+ F +               + + +    L   +I  +AC
Sbjct: 66  MKIHSVDQGAEHMLILSSDGKPFEYN------------YSIEHARFQCILQEKSIIQIAC 113

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR-KVSGQMEGLQISSICCGPWH 414
           G++H+ A++  G+L+ WG  +H  G LG V  +   IP  +    + G+ +  I  G  H
Sbjct: 114 GDYHSLALSKGGELFAWGQNLH--GQLG-VGRLFASIPTPQAVEHLSGVPLVQISAGKAH 170

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           + A++ +G ++++G    G LG G       P  +ETL   +    +CG  HTA +    
Sbjct: 171 SMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLT--- 227

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                ++GL    +FT+G G  GQLGH   +  + P  V         ++ACG   T+A 
Sbjct: 228 -----TDGL----VFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAY 278

Query: 535 TA-TGQVFSMGSADYGQLGSPGSTGK---FPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
            +  G+VFS GS   GQLG+ G+  +    P ++  N + ++ E        + +     
Sbjct: 279 VSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLPSNEELKF-ESRTSDKELVMIAGGNQ 337

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSV 628
            V  W +  N  +    N  ++ PTL E    + +  V
Sbjct: 338 SVLLWMEKKNPYV----NLRRKIPTLNEGTVKRWIADV 371



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 114/237 (48%), Gaps = 27/237 (11%)

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
           ++I S+  G  H   ++S GK F +              S    R    L+E   +  +C
Sbjct: 66  MKIHSVDQGAEHMLILSSDGKPFEYN------------YSIEHARFQCILQEKSIIQIAC 113

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISF 521
           G +H+ A+         S G    +LF WG    GQLG G     +  P  V+    +  
Sbjct: 114 GDYHSLAL---------SKG---GELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPL 161

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
            +++ G + ++AL+ +G V+S G  D GQLG   + G+ FP+ IE  + ++ +E +ACG 
Sbjct: 162 VQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIE-TLDNQQVEFLACGG 220

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            H A++++   V+T+G G  GQLGH   +N+  P LV  L   +V  + CG   T A
Sbjct: 221 SHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLA 277



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 13/195 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++F WG+ L +G LG       I +        P+ +E    +    I+ G  H++ ++
Sbjct: 125 GELFAWGQNL-HGQLGVGRLFASIPT--------PQAVEHLSGVPLVQISAGKAHSMALS 175

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G ++SWG    G+LG G      +P LI+ L+   +  +ACG  HT  +T  G ++T+
Sbjct: 176 MSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLTTDGLVFTF 235

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G +  G LG  S  +   PR V+ ++ G +++ I CG  HT A ++  GK+F+FG G 
Sbjct: 236 GAGKY--GQLGHNSTQNELRPRLVT-ELAGNRVTQIACGRRHTLAYVSDLGKVFSFGSGK 292

Query: 432 FGALGHGDRSSTSVP 446
            G LG+G   +  +P
Sbjct: 293 EGQLGNGGTHNQLIP 307



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 65/120 (54%), Gaps = 1/120 (0%)

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT-RIEGNIKHRYIEDIAC 578
           S  ++ACG   ++AL+  G++F+ G   +GQLG        PT +   ++    +  I+ 
Sbjct: 107 SIIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISA 166

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G  H   +S    VY+WG+   GQLG G  + +  P+L+E L ++QV+ + CG + TA +
Sbjct: 167 GKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALL 226


>gi|323451188|gb|EGB07066.1| hypothetical protein AURANDRAFT_71888 [Aureococcus anophagefferens]
          Length = 1060

 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 164/357 (45%), Gaps = 46/357 (12%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           +ACGS ++V+V   GQ+ S G+   G+LGHG   + + P++++ L G  +  VA    HT
Sbjct: 72  VACGSSYSVVVVA-GQVASCGKNVHGQLGHGGRDEETAPRVVEGLRGVRVVAVAARGAHT 130

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+   G +Y+WG G       G    + H  PR+++       + ++  G  H+ A+ +
Sbjct: 131 LALDDRGRVYSWGRGDEGQLGHGAFEAVPH--PRRIARLPT--SVVAVGAGRTHSLALDA 186

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            G ++++G G  GALGHGDR     PR VE  K       SCG  H A +          
Sbjct: 187 DGAVYSWGCGDDGALGHGDRRRQLAPRAVEFFKTRPAAAVSCGSRHNAVVT--------- 237

Query: 481 NGLSSKKLFTWGDGAEGQLGH---GDA-EPRVVPLCVKVSDDISFCKV-ACGHSITIALT 535
              +   L TWG  A GQ G    GD   P  VPL     D  + C + ACG+  T+  T
Sbjct: 238 ---ADGALVTWGWAAYGQCGASAGGDGLRPAEVPL---PGDGGAECVLAACGYRHTLCAT 291

Query: 536 --ATGQ-VFSMGSADYGQLGSPGSTGKFPTRIEGNI-------KHRYIEDIACGSYH--- 582
             A+G  +++ G   YGQ G    +   P R+ G             +E ++ G  H   
Sbjct: 292 RHASGDAIWAFGWNAYGQCGGSTCSAAAPRRVGGKFLGSQEGGDGAVVEALSAGGRHSVC 351

Query: 583 -IAVVSSKSEVYTWGKGANGQLGHGDNENKQ-------TPTLVEALRDKQVKSVVCG 631
            + +    +  Y WG+G +GQLG GD  +++       T   V ++  + ++ + CG
Sbjct: 352 CVRLPGGGTATYAWGRGDDGQLGSGDRRDRRANPRVAATAARVNSVGQRPLRGLACG 408



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 120/267 (44%), Gaps = 17/267 (6%)

Query: 375 GIHNLGLLGQVSEISHWIPRKV-SGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
           G +  G LG     S  +P +V + ++   ++  + CG  ++  +  AG++ + G    G
Sbjct: 38  GYNATGQLGCGDRESRVVPWRVRTSRLGKGRVDGVACGSSYSVVVV-AGQVASCGKNVHG 96

Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
            LGHG R   + PR VE L+ ++ V  +    HT A+ +              ++++WG 
Sbjct: 97  QLGHGGRDEETAPRVVEGLRGVRVVAVAARGAHTLALDD------------RGRVYSWGR 144

Query: 494 GAEGQLGHGDAEPRVVPLCVKVSD-DISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
           G EGQLGHG  E   VP   +++    S   V  G + ++AL A G V+S G  D G LG
Sbjct: 145 GDEGQLGHGAFE--AVPHPRRIARLPTSVVAVGAGRTHSLALDADGAVYSWGCGDDGALG 202

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                 +   R     K R    ++CGS H AVV++   + TWG  A GQ G     +  
Sbjct: 203 HGDRRRQLAPRAVEFFKTRPAAAVSCGSRHNAVVTADGALVTWGWAAYGQCGASAGGDGL 262

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAIC 639
            P  V    D   + V+    +   +C
Sbjct: 263 RPAEVPLPGDGGAECVLAACGYRHTLC 289



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 93/223 (41%), Gaps = 28/223 (12%)

Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
           ++  G    G LG GDR S  VP  V T +  K  +       + ++V VAG+ +     
Sbjct: 34  VYACGYNATGQLGCGDRESRVVPWRVRTSRLGKGRVDGVACGSSYSVVVVAGQVA----- 88

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
                 + G    GQLGHG  +    P  V+    +    VA   + T+AL   G+V+S 
Sbjct: 89  ------SCGKNVHGQLGHGGRDEETAPRVVEGLRGVRVVAVAARGAHTLALDDRGRVYSW 142

Query: 544 GSADYGQLG--------SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
           G  D GQLG         P    + PT +           +  G  H   + +   VY+W
Sbjct: 143 GRGDEGQLGHGAFEAVPHPRRIARLPTSVVA---------VGAGRTHSLALDADGAVYSW 193

Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G G +G LGHGD   +  P  VE  + +   +V CGS   A +
Sbjct: 194 GCGDDGALGHGDRRRQLAPRAVEFFKTRPAAAVSCGSRHNAVV 236



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 127/319 (39%), Gaps = 49/319 (15%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLES 292
           V+ +++G+     D  G V+ WG G    LG+G         E     RR A LP    +
Sbjct: 121 VAVAARGAHTLALDDRGRVYSWGRGDEGQLGHGAF-------EAVPHPRRIARLP----T 169

Query: 293 TVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM 352
           +VV    ++  G  H++ +   G ++SWG G  G LGHG       P+ ++         
Sbjct: 170 SVV----AVGAGRTHSLALDADGAVYSWGCGDDGALGHGDRRRQLAPRAVEFFKTRPAAA 225

Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQME-GLQISSICCG 411
           V+CG  H   VT  G L TWG   +  G  G  +      P +V    + G +     CG
Sbjct: 226 VSCGSRHNAVVTADGALVTWGWAAY--GQCGASAGGDGLRPAEVPLPGDGGAECVLAACG 283

Query: 412 PWHTAAIT---SAGKLFTFGDGTFGALGHGDRSSTSVPREV--------ETLKELKTVMA 460
             HT   T   S   ++ FG   +G  G G   S + PR V        E          
Sbjct: 284 YRHTLCATRHASGDAIWAFGWNAYGQCG-GSTCSAAAPRRVGGKFLGSQEGGDGAVVEAL 342

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-----AEPRVVPLCVKV 515
           S G  H+   V + G  + +        + WG G +GQLG GD     A PRV     +V
Sbjct: 343 SAGGRHSVCCVRLPGGGTAT--------YAWGRGDDGQLGSGDRRDRRANPRVAATAARV 394

Query: 516 SD--DISFCKVACGHSITI 532
           +         +ACG + T+
Sbjct: 395 NSVGQRPLRGLACGWAHTV 413


>gi|296486689|tpg|DAA28802.1| TPA: hect domain and RLD 5 [Bos taurus]
          Length = 963

 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 120/214 (56%), Gaps = 21/214 (9%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGEFH 359
           I CG  H++ ++K G++F+WG+   G+LG G + A  S P++++ L+G  +  ++ GE H
Sbjct: 157 ITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAH 216

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTA 416
           + A+++SG++Y+WG   ++ G LG    + H   ++    +E L   ++  + CG  HTA
Sbjct: 217 SMALSMSGNVYSWGR--NDCGQLG----LGHTYNKESPSCIEALDDQKVEFLACGGCHTA 270

Query: 417 AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
            +T +G +FTFGDG +G LGH    +   PR V  L   +    +CG  HT A V   G 
Sbjct: 271 LLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTG- 329

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
                     K+F++G G EGQLG+G    +++P
Sbjct: 330 ----------KVFSFGSGKEGQLGNGGTRNQLIP 353



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 124/278 (44%), Gaps = 29/278 (10%)

Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
           PK I       IH +  GE H   ++  G  + +   I +                +   
Sbjct: 103 PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYSIEH---------------ARFQC 147

Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGD-RSSTSVPREVETLKELKT 457
            ++   I  I CG +H+ A++  G+LF +G    G LG G   +STS P  VE L  +  
Sbjct: 148 ILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPL 207

Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
           V  S G  H+ A+       SG+       +++WG    GQLG G    +  P C++  D
Sbjct: 208 VQISAGEAHSMAL-----SMSGN-------VYSWGRNDCGQLGLGHTYNKESPSCIEALD 255

Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIA 577
           D     +ACG   T  LT +G VF+ G   YGQLG   +  +   R+   +    +  IA
Sbjct: 256 DQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIA 315

Query: 578 CGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
           CG  H +A VS   +V+++G G  GQLG+G   N+  P
Sbjct: 316 CGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIP 353



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 110/198 (55%), Gaps = 13/198 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++F WG+ L +G LG  V  +  S++       P+++E+   +    I+ G  H++ ++
Sbjct: 171 GELFAWGQNL-DGQLG--VGRIFASTST------PEIVENLSGVPLVQISAGEAHSMALS 221

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G ++SWG    G+LG G   +   P  I+AL+   +  +ACG  HT  +T SG ++T+
Sbjct: 222 MSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLTKSGLVFTF 281

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           GDG +  G LG  S  +   PR V+G + G +++ I CG  HT A ++  GK+F+FG G 
Sbjct: 282 GDGKY--GQLGHNSTQNELRPRLVTG-LVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGK 338

Query: 432 FGALGHGDRSSTSVPREV 449
            G LG+G   +  +PR +
Sbjct: 339 EGQLGNGGTRNQLIPRPM 356


>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
 gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
          Length = 1423

 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 156/333 (46%), Gaps = 22/333 (6%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P    S  VL   +++ G  H++++T    +++WG+ + G+LG G       P     L 
Sbjct: 61  PLYPASAAVLGEAAVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGL- 119

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
             ++  V+ GE H+ A+T  G ++ WG  +++ G LG  +      P +V G      I 
Sbjct: 120 -PSVAQVSAGESHSLALTDDGRVFAWG--LNSSGQLGDGTTADSRTPVQVQGLATDSTIK 176

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
            +  G  H+ A+TS G++F +G  + G LG+     +S+P +V+ L    T +A+ G  H
Sbjct: 177 VVAAGGNHSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLPANVTAVAAGGN-H 235

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK-VSDDISFCKVA 525
           + A+             S  +++ WG  + GQLG G       P+ V  +        V+
Sbjct: 236 SLALT------------SDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVS 283

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIA 584
            G   ++AL   G V++ G   YGQLG+  +T  + P ++ G      +  ++ G     
Sbjct: 284 AGKDHSLALMQDGTVYAWGGNSYGQLGNGTTTASEMPVQVTG---LANVTAVSAGGSDSL 340

Query: 585 VVSSKSEVYTWGKGANGQLGHGDNENKQTPTLV 617
            ++S   VY WG  ++GQLG G   N+ TP  V
Sbjct: 341 ALTSDGYVYAWGLNSSGQLGDGTTSNRNTPVRV 373



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 18/217 (8%)

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
           +++  G  H+  +TS   ++ +GD T G LG G  +    P   + L  +  V  S G  
Sbjct: 73  AAVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLPSVAQV--SAGES 130

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK-VSDDISFCKV 524
           H+ A+ +              ++F WG  + GQLG G       P+ V+ ++ D +   V
Sbjct: 131 HSLALTD------------DGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVV 178

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGST-GKFPTRIEGNIKHRYIEDIACGSYHI 583
           A G + ++ALT+ G+VF+ G    GQLG+  +     P +++G   +  +  +A G  H 
Sbjct: 179 AAGGNHSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLPAN--VTAVAAGGNHS 236

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
             ++S   +Y WG  ++GQLG G   N  TP LV  L
Sbjct: 237 LALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGL 273



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 128/290 (44%), Gaps = 24/290 (8%)

Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
           V+ G  H+  +T    ++ WGD  +  G LG  +      P    G     Q+S    G 
Sbjct: 75  VSAGGSHSLVLTSDQTVWAWGDNTN--GQLGDGTTTGRQTPTPAQGLPSVAQVS---AGE 129

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV-MASCGVWHTAAIV 471
            H+ A+T  G++F +G  + G LG G  + +  P +V+ L    T+ + + G  H+ A+ 
Sbjct: 130 SHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALT 189

Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
                       S  ++F WG  + GQLG+       +P+ V+     +   VA G + +
Sbjct: 190 ------------SDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQ-GLPANVTAVAAGGNHS 236

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
           +ALT+ G++++ G    GQLG  G+T     P  + G         ++ G  H   +   
Sbjct: 237 LALTSDGRIYAWGLNSSGQLGD-GTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQD 295

Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
             VY WG  + GQLG+G     + P  V  L +  V +V  G + + A+ 
Sbjct: 296 GTVYAWGGNSYGQLGNGTTTASEMPVQVTGLAN--VTAVSAGGSDSLALT 343


>gi|156120637|ref|NP_001095465.1| E3 ISG15--protein ligase HERC5 [Bos taurus]
 gi|151555709|gb|AAI49082.1| HERC5 protein [Bos taurus]
          Length = 958

 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 120/214 (56%), Gaps = 21/214 (9%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGEFH 359
           I CG  H++ ++K G++F+WG+   G+LG G + A  S P++++ L+G  +  ++ GE H
Sbjct: 152 ITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAH 211

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTA 416
           + A+++SG++Y+WG   ++ G LG    + H   ++    +E L   ++  + CG  HTA
Sbjct: 212 SMALSMSGNVYSWGR--NDCGQLG----LGHTYNKESPSCIEALDDQKVEFLACGGCHTA 265

Query: 417 AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
            +T +G +FTFGDG +G LGH    +   PR V  L   +    +CG  HT A V   G 
Sbjct: 266 LLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTG- 324

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
                     K+F++G G EGQLG+G    +++P
Sbjct: 325 ----------KVFSFGSGKEGQLGNGGTRNQLIP 348



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 124/278 (44%), Gaps = 29/278 (10%)

Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
           PK I       IH +  GE H   ++  G  + +   I +                +   
Sbjct: 98  PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYSIEH---------------ARFQC 142

Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGD-RSSTSVPREVETLKELKT 457
            ++   I  I CG +H+ A++  G+LF +G    G LG G   +STS P  VE L  +  
Sbjct: 143 ILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPL 202

Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
           V  S G  H+ A+       SG+       +++WG    GQLG G    +  P C++  D
Sbjct: 203 VQISAGEAHSMAL-----SMSGN-------VYSWGRNDCGQLGLGHTYNKESPSCIEALD 250

Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIA 577
           D     +ACG   T  LT +G VF+ G   YGQLG   +  +   R+   +    +  IA
Sbjct: 251 DQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIA 310

Query: 578 CGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
           CG  H +A VS   +V+++G G  GQLG+G   N+  P
Sbjct: 311 CGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIP 348



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 109/196 (55%), Gaps = 13/196 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++F WG+ L +G LG  V  +  S++       P+++E+   +    I+ G  H++ ++
Sbjct: 166 GELFAWGQNL-DGQLG--VGRIFASTST------PEIVENLSGVPLVQISAGEAHSMALS 216

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G ++SWG    G+LG G   +   P  I+AL+   +  +ACG  HT  +T SG ++T+
Sbjct: 217 MSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLTKSGLVFTF 276

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           GDG +  G LG  S  +   PR V+G + G +++ I CG  HT A ++  GK+F+FG G 
Sbjct: 277 GDGKY--GQLGHNSTQNELRPRLVTG-LVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGK 333

Query: 432 FGALGHGDRSSTSVPR 447
            G LG+G   +  +PR
Sbjct: 334 EGQLGNGGTRNQLIPR 349


>gi|47214395|emb|CAG00876.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 371

 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 170/361 (47%), Gaps = 53/361 (14%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+CG +H  L+TK G++F +G  + G+LG G +  V+ P  + AL    + + ACG  HT
Sbjct: 31  ISCGDEHTALITKNGRLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVLLAACGRNHT 90

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
              T  G +++ G        LG   E + +  R++        I  +  G   +AA+T 
Sbjct: 91  LICTGEGRVFSSGGNSEGQLGLGDCEERTTF--RRIHALDSLGPIKMLAAGSNTSAALTE 148

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           +GKLF +GD T G +G G  S    P+EV     +  V  SCG +H+ A+V  AG     
Sbjct: 149 SGKLFMWGDNTEGQIGLGKESHAPWPQEVSVGAPVSWV--SCGYYHS-ALVTAAG----- 200

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAE-PR-VVPLCVK-VSDDISFCKVACGHSITIALTAT 537
                  L+T+G+   G+LG    + PR  VP  V+ + + +   +VACG   T+ALT  
Sbjct: 201 ------ALYTFGERDSGKLGLTTEQLPRHRVPQPVRSIGEPVR--QVACGGGHTVALTGG 252

Query: 538 G-------------------------QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH-- 570
           G                         ++F+ G   +GQLG    T  F +R+   ++H  
Sbjct: 253 GSTRRRPRCTRGFAVDLAGFLWLSEDRLFTFGLGQFGQLGH--GTFVFESRLPRLVEHFK 310

Query: 571 -RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKS 627
              +  +ACG  H AV++    +YT+G G +G+LG GD    N+  PTL        V++
Sbjct: 311 KGRVRQVACGENHSAVITDGGLLYTFGDGRHGKLGLGDENFTNQFKPTLCSRFLKYGVQA 370

Query: 628 V 628
           V
Sbjct: 371 V 371



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 145/316 (45%), Gaps = 49/316 (15%)

Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
           ++CG+ HT  +T +G L+ +G   +N G LG  S+++   P  V   ++  ++    CG 
Sbjct: 31  ISCGDEHTALITKNGRLFMFGS--NNWGQLGLGSKVTVNKPTCVK-ALKSEKVLLAACGR 87

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTV-MASCGVWHTAAIV 471
            HT   T  G++F+ G  + G LG GD    +  R +  L  L  + M + G   +AA+ 
Sbjct: 88  NHTLICTGEGRVFSSGGNSEGQLGLGDCEERTTFRRIHALDSLGPIKMLAAGSNTSAALT 147

Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
           E            S KLF WGD  EGQ+G G       P  V V   +S+  V+CG+  +
Sbjct: 148 E------------SGKLFMWGDNTEGQIGLGKESHAPWPQEVSVGAPVSW--VSCGYYHS 193

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPT-RIEGNIKH--RYIEDIACGSYHIAVVS- 587
             +TA G +++ G  D G+LG   +T + P  R+   ++     +  +ACG  H   ++ 
Sbjct: 194 ALVTAAGALYTFGERDSGKLGL--TTEQLPRHRVPQPVRSIGEPVRQVACGGGHTVALTG 251

Query: 588 ------------------------SKSEVYTWGKGANGQLGHGDNE-NKQTPTLVEALRD 622
                                   S+  ++T+G G  GQLGHG      + P LVE  + 
Sbjct: 252 GGSTRRRPRCTRGFAVDLAGFLWLSEDRLFTFGLGQFGQLGHGTFVFESRLPRLVEHFKK 311

Query: 623 KQVKSVVCGSNFTAAI 638
            +V+ V CG N +A I
Sbjct: 312 GRVRQVACGENHSAVI 327



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 99/219 (45%), Gaps = 42/219 (19%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F+WG+              +I       A  P+  E +V      ++CG  H+ LVT
Sbjct: 150 GKLFMWGDNTEG----------QIGLGKESHAPWPQ--EVSVGAPVSWVSCGYYHSALVT 197

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDALNGSNIHMVACGEFHTCAVT------ 364
             G ++++GE   GKLG   E    +  P+ + ++ G  +  VACG  HT A+T      
Sbjct: 198 AAGALYTFGERDSGKLGLTTEQLPRHRVPQPVRSI-GEPVRQVACGGGHTVALTGGGSTR 256

Query: 365 ------------LSGDLYTWGDGIHNLGLLGQVSEISHW-------IPRKVSGQMEGLQI 405
                       L+G L+   D +   G LGQ  ++ H        +PR V    +G ++
Sbjct: 257 RRPRCTRGFAVDLAGFLWLSEDRLFTFG-LGQFGQLGHGTFVFESRLPRLVEHFKKG-RV 314

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS 444
             + CG  H+A IT  G L+TFGDG  G LG GD + T+
Sbjct: 315 RQVACGENHSAVITDGGLLYTFGDGRHGKLGLGDENFTN 353



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 68/132 (51%), Gaps = 4/132 (3%)

Query: 509 VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGN 567
           +P    + +D+   +++CG   T  +T  G++F  GS ++GQLG     T   PT ++  
Sbjct: 17  IPSKFWLKNDVP-SQISCGDEHTALITKNGRLFMFGSNNWGQLGLGSKVTVNKPTCVKA- 74

Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRD-KQVK 626
           +K   +   ACG  H  + + +  V++ G  + GQLG GD E + T   + AL     +K
Sbjct: 75  LKSEKVLLAACGRNHTLICTGEGRVFSSGGNSEGQLGLGDCEERTTFRRIHALDSLGPIK 134

Query: 627 SVVCGSNFTAAI 638
            +  GSN +AA+
Sbjct: 135 MLAAGSNTSAAL 146



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 17/133 (12%)

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           TG VF+ G + +            P++    +K+     I+CG  H A+++    ++ +G
Sbjct: 2   TGAVFTFGKSKFAD--------NIPSKFW--LKNDVPSQISCGDEHTALITKNGRLFMFG 51

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSG-- 654
               GQLG G       PT V+AL+ ++V    CG N T  IC  +G   +      G  
Sbjct: 52  SNNWGQLGLGSKVTVNKPTCVKALKSEKVLLAACGRNHT-LICTGEGRVFSSGGNSEGQL 110

Query: 655 ----CRNQFNFRR 663
               C  +  FRR
Sbjct: 111 GLGDCEERTTFRR 123


>gi|403366107|gb|EJY82845.1| RCC1 repeat domain protein [Oxytricha trifallax]
          Length = 2141

 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 103/327 (31%), Positives = 158/327 (48%), Gaps = 30/327 (9%)

Query: 251 GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI----ACGSK 306
           G G VF WG  +  G LG A+N  EI + ++++  L     S V  DA  I    +CG+ 
Sbjct: 204 GNGIVFTWGV-VNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGNS 262

Query: 307 HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDAL-NG---SNIHMVACGEFHTC 361
             + ++++G ++SWG G+ G LG G E +VS  P +I    NG    NI  +ACG  H  
Sbjct: 263 FTLALSQEGHVYSWGLGNSGGLGQG-EQNVSMTPNIIKYQKNGHLFQNIKDIACGSNHVL 321

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           ++   G +Y+WG+G    G LG   E    IP+++ G +   +I  I  G   +AAI+  
Sbjct: 322 SLDHQGIVYSWGNG--QGGRLGHGDETGENIPKEIIG-LRQYKILMIEAGEGSSAAISIK 378

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
            +LF +G G  G LG G  ++   P  +E LK+ K    + G  H+  I           
Sbjct: 379 NELFIWGVGLHGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCI----------- 427

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPR--VVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
            L + K   WG   +G+LG   A  R    P  +   D     ++A G   +IALT  G+
Sbjct: 428 -LRNGKAMCWGSSKDGKLGLETALDRNFTQPKELVTLDKEKLYQIAAGPFHSIALTENGE 486

Query: 540 VFSMGSADYGQLGSPGSTG--KFPTRI 564
           ++S G++  G+LG     G  + P +I
Sbjct: 487 IYSFGNSKDGKLGYDEIKGNVQIPRKI 513



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 147/319 (46%), Gaps = 33/319 (10%)

Query: 315 GQIFSWGEGSGGKLGHGVEAD------------VSYPKLIDALNGSNIHM-VACGEFHTC 361
           G +F+WG  + G+LG  +               + +   I   + S I + V+CG   T 
Sbjct: 206 GIVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGNSFTL 265

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG---LQISSICCGPWHTAAI 418
           A++  G +Y+WG G  N G LGQ  +     P  +  Q  G     I  I CG  H  ++
Sbjct: 266 ALSQEGHVYSWGLG--NSGGLGQGEQNVSMTPNIIKYQKNGHLFQNIKDIACGSNHVLSL 323

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
              G ++++G+G  G LGHGD +  ++P+E+  L++ K +M   G   +AAI        
Sbjct: 324 DHQGIVYSWGNGQGGRLGHGDETGENIPKEIIGLRQYKILMIEAGEGSSAAIS------- 376

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
                   +LF WG G  G+LG G     + P+ ++   D     +A G + ++ +   G
Sbjct: 377 -----IKNELFIWGVGLHGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCILRNG 431

Query: 539 QVFSMGSADYGQLGSPGSTGKFPTRIEG--NIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           +    GS+  G+LG   +  +  T+ +    +    +  IA G +H   ++   E+Y++G
Sbjct: 432 KAMCWGSSKDGKLGLETALDRNFTQPKELVTLDKEKLYQIAAGPFHSIALTENGEIYSFG 491

Query: 597 KGANGQLGHGDNE-NKQTP 614
              +G+LG+ + + N Q P
Sbjct: 492 NSKDGKLGYDEIKGNVQIP 510



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 91/395 (23%), Positives = 166/395 (42%), Gaps = 61/395 (15%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACGE 357
           + IAC + ++  + ++G ++ WG G  G LG+  + + +S P  +  L    + +    E
Sbjct: 3   RKIACNATNSGAIDQEGNVYVWGAGKYGLLGNPKQKNPISKPIKL-QLKSEKLILDYSSE 61

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP----RKVSGQMEGLQI----SSIC 409
               A +LS   Y      H + ++  ++  S + P    + + G+ +   +    +++ 
Sbjct: 62  QTFVATSLSFGQY------HGVVVVNDINTNSDFNPLLYAQTILGEFKAFLMRCWDTTVK 115

Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPR-EVETLKELKTVMASCGVWHTA 468
             P H++ + +  +        F       +     P+ ++++LK+L    A      T 
Sbjct: 116 KLPEHSSDVYATEEHIIENTLKFCF----KKEEKYFPQVKLDSLKQLMVYQAKLSFKDTV 171

Query: 469 A---IVEVAGKTSGSNGLSSKKL--------------FTWGDGAEGQLGHGDAEPRV--- 508
           +   + +     +  + ++ K+L              FTWG   EG+LG    E  +   
Sbjct: 172 SYNRMFQDLADPNDEDKINLKELRDQLIGRRCGNGIVFTWGVVNEGRLGIALNEKEIENI 231

Query: 509 ----------VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG 558
                      P  VK    I   KV+CG+S T+AL+  G V+S G  + G LG      
Sbjct: 232 EQKNNELIPFKPSIVKFDASIIIIKVSCGNSFTLALSQEGHVYSWGLGNSGGLGQGEQNV 291

Query: 559 KFPTRIEGNIKHRY-------IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
                I   IK++        I+DIACGS H+  +  +  VY+WG G  G+LGHGD   +
Sbjct: 292 SMTPNI---IKYQKNGHLFQNIKDIACGSNHVLSLDHQGIVYSWGNGQGGRLGHGDETGE 348

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSI 646
             P  +  LR  ++  +  G   +AAI +   + I
Sbjct: 349 NIPKEIIGLRQYKILMIEAGEGSSAAISIKNELFI 383



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 131/317 (41%), Gaps = 53/317 (16%)

Query: 249 FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            D  G V+ WG G G  L  G   G  I          PK +          I  G   +
Sbjct: 323 LDHQGIVYSWGNGQGGRLGHGDETGENI----------PKEIIGLRQYKILMIEAGEGSS 372

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
             ++ + ++F WG G  G+LG G  A+V  P +++ L    +  +A G  H+  +  +G 
Sbjct: 373 AAISIKNELFIWGVGLHGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCILRNGK 432

Query: 369 LYTWG---DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
              WG   DG   LGL  + +   ++   K    ++  ++  I  GP+H+ A+T  G+++
Sbjct: 433 AMCWGSSKDG--KLGL--ETALDRNFTQPKELVTLDKEKLYQIAAGPFHSIALTENGEIY 488

Query: 426 TFGDGTFGALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           +FG+   G LG+ + + +  +PR++           +C ++        A KT  ++   
Sbjct: 489 SFGNSKDGKLGYDEIKGNVQIPRKI----------TNCPIF--------ARKTGLNDRRD 530

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV---ACGHSITIALTATGQVF 541
             +LF   D                   +  +  +  C+V    CG + T+ L   GQ++
Sbjct: 531 KYQLFNQFDDQ--------------MTVISNNQQLGGCEVIQAQCGFNSTVFLLNDGQMY 576

Query: 542 SMGSADYGQLGSPGSTG 558
             GS  YGQLG     G
Sbjct: 577 VCGSNKYGQLGFSKRAG 593



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 110/226 (48%), Gaps = 11/226 (4%)

Query: 422 GKLFTFGDGTFGALG--HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
           G +FT+G    G LG    ++   ++ ++   L   K  +       +  I++V+   S 
Sbjct: 206 GIVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDA--SIIIIKVSCGNSF 263

Query: 480 SNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK----VACGHSITIAL 534
           +  LS +  +++WG G  G LG G+    + P  +K   +    +    +ACG +  ++L
Sbjct: 264 TLALSQEGHVYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQNIKDIACGSNHVLSL 323

Query: 535 TATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
              G V+S G+   G+LG    TG+  P  I G ++   I  I  G    A +S K+E++
Sbjct: 324 DHQGIVYSWGNGQGGRLGHGDETGENIPKEIIG-LRQYKILMIEAGEGSSAAISIKNELF 382

Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            WG G +G+LG G   N   P ++E L+D++V+ +  GSN +  I 
Sbjct: 383 IWGVGLHGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCIL 428



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 134/319 (42%), Gaps = 42/319 (13%)

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSI 408
           I  V+ G FH  AVT  G  + WG   +  LG+  + + +S   P ++    + + I + 
Sbjct: 677 IKHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDTVVSK--PTRIKSLQDKVIIMT- 733

Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSST------SVPREV------------- 449
             G  H+  ++  G++   G   FG LG G  S++        P E+             
Sbjct: 734 ASGESHSLFLSDLGEVLCSGFNEFGELGIGLNSTSGGADKKENPDEIYDENYQRQLIETK 793

Query: 450 -----ETLKELKTV-MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
                + +K L+++   + G  H+ AI     K        + KLFTWG G  GQ GHG 
Sbjct: 794 IELTPKIIKGLESIGFIAAGKNHSIAIRTYKRKEK------AMKLFTWGCGWHGQTGHGS 847

Query: 504 AEPRVVPLCVKVS--DDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF- 560
            +   +P  VKV    D  F + +CG   TIAL  TG ++  G      +       +F 
Sbjct: 848 WQNDYLPQIVKVPVLKDTKFIQASCGSKHTIALDTTGHIWFFGYKPSVGIEDFNDEKQFM 907

Query: 561 PTRIEGNIK-HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
           P R+E   K     + I+ G  H   V+    VY +GK  N ++   ++ +K+     + 
Sbjct: 908 PARLETPSKIQEPFKFISSGEEHNLAVTQSGLVYGFGKNTNTKI---NSSHKEYLYFDQV 964

Query: 620 LRDKQVKSVVCGSNFTAAI 638
             +++     CG+N +  I
Sbjct: 965 ENEEKAVLTACGANHSVLI 983



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 115/257 (44%), Gaps = 34/257 (13%)

Query: 366 SGDLYTWGDGIHNLGLLG------QVSEI----SHWIPRK--VSGQMEGLQISSICCGPW 413
           +G ++TWG  + N G LG      ++  I    +  IP K  +      + I  + CG  
Sbjct: 205 NGIVFTWG--VVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKFDASIIIIKVSCGNS 262

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE------TLKELKTVMASCGVWHT 467
            T A++  G ++++G G  G LG G+++ +  P  ++        + +K +  +CG  H 
Sbjct: 263 FTLALSQEGHVYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQNIKDI--ACGSNHV 320

Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
            ++           G+    +++WG+G  G+LGHGD     +P  +          +  G
Sbjct: 321 LSL--------DHQGI----VYSWGNGQGGRLGHGDETGENIPKEIIGLRQYKILMIEAG 368

Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVS 587
              + A++   ++F  G   +G+LG+  +       +  ++K + +EDIA GS H   + 
Sbjct: 369 EGSSAAISIKNELFIWGVGLHGRLGTGKTANVLKPVMLEDLKDQKVEDIALGSNHSLCIL 428

Query: 588 SKSEVYTWGKGANGQLG 604
              +   WG   +G+LG
Sbjct: 429 RNGKAMCWGSSKDGKLG 445


>gi|74140658|dbj|BAB30628.3| unnamed protein product [Mus musculus]
          Length = 590

 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 165/354 (46%), Gaps = 59/354 (16%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H  +VT   +++ +G  + G+LG G +A +  P  I AL    + + ACG  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137

Query: 361 CAVTLSGDLYTWGDGIHNLGLLG--------QVSEISHWIPRKVSGQMEGLQISSICCGP 412
              T +G +Y  G   +N G LG           +I  + P           I  +  G 
Sbjct: 138 LVSTDTGGVYAAGG--NNEGQLGLGDTDDRDTFHQIVFFTPADT--------IKQLSAGA 187

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
             +AA+T  GKLF +GD + G +G  D+S+  +P EV   K +  +  SCG +H+A +  
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT- 244

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-------AEPRVVPLCVKVSDDISFCKVA 525
                         +L+T+G+   G+LG  +       +  RV+ +  +V       +VA
Sbjct: 245 -----------MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERV------IQVA 287

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACG 579
           CG   T+ LT    V++ G   +GQLG     G F      P  IE  IK + I  I+CG
Sbjct: 288 CGGGHTVVLTEK-VVYAFGLGQFGQLG----LGTFLFETSEPKIIE-RIKDQKICHISCG 341

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
             H A+++    +YT+G G +G+LG G  +  N+  PTL        V+ + CG
Sbjct: 342 ENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 143/297 (48%), Gaps = 33/297 (11%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDALNGSNIHMVACGEFHT 360
           ACG  H ++ T  G +++ G  + G+LG G   D  ++ +++       I  ++ G   +
Sbjct: 131 ACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTS 190

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T  G L+ WGD  ++ G +G   + +  IP +V+    G  IS I CG +H+A +T 
Sbjct: 191 AALTEDGKLFMWGD--NSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTM 245

Query: 421 AGKLFTFGDGTFGALGHGDR--SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
            G+L+TFG+   G LG  +    +   P+ V  + E + +  +CG  HT  + E      
Sbjct: 246 DGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTE------ 298

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHG-----DAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
                  K ++ +G G  GQLG G      +EP++    ++   D   C ++CG + T  
Sbjct: 299 -------KVVYAFGLGQFGQLGLGTFLFETSEPKI----IERIKDQKICHISCGENHTAL 347

Query: 534 LTATGQVFSMGSADYGQ--LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
           +T  G +++ G   +G+  LG    T +F   +  N     ++ IACG  H+ V ++
Sbjct: 348 MTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFAT 404



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 120/264 (45%), Gaps = 35/264 (13%)

Query: 215 GLDDANSRSS--------TADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGL 266
           GL D + R +         AD+ +  LS+  ++S+  +  ED    G +F+WG+      
Sbjct: 158 GLGDTDDRDTFHQIVFFTPADTIK-QLSAGANTSA--ALTED----GKLFMWGDN----- 205

Query: 267 LGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGG 326
                +  +I   D+ +  +P   E TV      I+CG  H+  VT  G+++++GE   G
Sbjct: 206 -----SEGQIGLEDKSNVCIPH--EVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENG 258

Query: 327 KLGHGVEADVSY--PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQ 384
           KLG   E  +++  P+ +  +    I  VACG  HT  +T   +   +  G+   G LG 
Sbjct: 259 KLGLPNELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVLT---EKVVYAFGLGQFGQLGL 314

Query: 385 VSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS 444
            + +      K+  +++  +I  I CG  HTA +T  G L+TFGDG  G LG G  + T+
Sbjct: 315 GTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTN 374

Query: 445 --VPREVETLKELKTVMASCGVWH 466
              P            + +CG  H
Sbjct: 375 QFFPTLCSNFLRFAVQLIACGGCH 398



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 11/129 (8%)

Query: 507 RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEG 566
           RV P        I F       S ++ +  TG VF+ G   + +          P++   
Sbjct: 20  RVAPAIFPKQAQIPFAGFGMAESESL-VPDTGAVFTFGKTKFAE--------NIPSKFW- 69

Query: 567 NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVK 626
             K+     ++CG  H A+V+  +++Y +G    GQLG G       PT ++AL+ ++VK
Sbjct: 70  -FKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVK 128

Query: 627 SVVCGSNFT 635
              CG N T
Sbjct: 129 LAACGRNHT 137


>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
           mutus]
          Length = 544

 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 148/311 (47%), Gaps = 19/311 (6%)

Query: 291 ESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNI 350
           E  +V  A      S   +  T   +IF  G    G LG G       P+ +D+L+G  I
Sbjct: 34  ELQLVRQACVFGSASNELLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI 93

Query: 351 HMVACGEF-HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
             ++ G   H    T  G+++TWG   ++   LG  +  +  +P  +S  +   Q+  + 
Sbjct: 94  ACLSYGSGPHIVLATTEGEVFTWGHNAYSQ--LGNGTTNAGLVPYHISTNLSNKQVIEVA 151

Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTA 468
           CG +H+  +TS G++F +G    G +G G  ++  +PR V    + K V+  +CG   + 
Sbjct: 152 CGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSM 211

Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH 528
           A+V            ++ ++F WG    GQLG G +  +  P  V     I   +VACG+
Sbjct: 212 AVV------------NTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGY 259

Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVS 587
           + T+ LT  GQV++ G+  YGQLG+   + + +PT +    K R IE  AC S H +   
Sbjct: 260 AHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACHSAHTSAAK 318

Query: 588 SK-SEVYTWGK 597
           ++   VY WG+
Sbjct: 319 TQGGHVYMWGQ 329



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 110/221 (49%), Gaps = 19/221 (8%)

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           ++F  G    G LG GD  ST  PR +++L   K    S G      +    G+      
Sbjct: 59  EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGE------ 112

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS---FCKVACGHSITIALTATGQ 539
                +FTWG  A  QLG+G     +VP    +S ++S     +VACG   ++ LT+ G+
Sbjct: 113 -----VFTWGHNAYSQLGNGTTNAGLVPY--HISTNLSNKQVIEVACGSYHSLVLTSDGE 165

Query: 540 VFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
           VF+ G  + GQ+GS GST     P R+ G ++ + + +IACG      V +  EV+ WG 
Sbjct: 166 VFAWGYNNSGQVGS-GSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGY 224

Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             NGQLG G + N+ TP  V AL+  +V+ V CG   T  +
Sbjct: 225 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 265



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 130/272 (47%), Gaps = 25/272 (9%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGS----KHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           D +  + P+ L+S   L  + IAC S     H VL T +G++F+WG  +  +LG+G    
Sbjct: 75  DVQSTIEPRRLDS---LSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNA 131

Query: 336 VSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
              P  I   L+   +  VACG +H+  +T  G+++ WG   +N G +G  S  +  IPR
Sbjct: 132 GLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG--YNNSGQVGSGSTANQPIPR 189

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           +V+G ++   + +I CG   + A+ + G++F +G    G LG G   +   P  V  L+ 
Sbjct: 190 RVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQG 249

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
           ++    +CG  HT  + +              +++ WG  + GQLG G+   +  P  V 
Sbjct: 250 IRVQRVACGYAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSYPTPVV 297

Query: 515 VSDDISFCKVACGHS--ITIALTATGQVFSMG 544
           V  D    ++A  HS   + A T  G V+  G
Sbjct: 298 VEKD-RIIEIAACHSAHTSAAKTQGGHVYMWG 328



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 118/234 (50%), Gaps = 25/234 (10%)

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAA 469
           GP H    T+ G++FT+G   +  LG+G  ++  VP  + T L   + +  +CG +H+  
Sbjct: 101 GP-HIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLV 159

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVA 525
           +             S  ++F WG    GQ+G G       PR V  C++    ++   +A
Sbjct: 160 LT------------SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVN---IA 204

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHI 583
           CG   ++A+  TG+VF  G    GQLG  GS+G  PT  R+   ++   ++ +ACG  H 
Sbjct: 205 CGQMCSMAVVNTGEVFVWGYNGNGQLGL-GSSGNQPTPCRVAA-LQGIRVQRVACGYAHT 262

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            V++ + +VY WG  + GQLG G+  N+  PT V   +D+ ++   C S  T+A
Sbjct: 263 LVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 316



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 19/180 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK----VLESTVVLDAQSIACGSKHA 308
           G+VF WG            N  ++ S    +  +P+     L+S VV++   IACG   +
Sbjct: 164 GEVFAWGYN----------NSGQVGSGSTANQPIPRRVTGCLQSKVVVN---IACGQMCS 210

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           + V   G++F WG    G+LG G   +   P  + AL G  +  VACG  HT  +T  G 
Sbjct: 211 MAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 270

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +Y W  G ++ G LG  ++ +   P  V  + + +   + C     +AA T  G ++ +G
Sbjct: 271 VYAW--GANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 328


>gi|27085405|gb|AAN85438.1| inositol 5-phosphatase 2 [Dictyostelium discoideum]
          Length = 1800

 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 159/343 (46%), Gaps = 56/343 (16%)

Query: 256 FIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQG 315
            +WGE +G                 R+   L K++    V+   S++CG  H +L+T + 
Sbjct: 54  LMWGEVMG-----------------RKHTTLFKIVWKRRVV---SVSCGFNHTLLLTSEY 93

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           +IFS G    G+LG     D + P  +D L+  N+  +  G   + A+T +GDLY WG  
Sbjct: 94  KIFSMGFNQTGQLGIENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITEAGDLYCWGSS 153

Query: 376 IH-NLGLLGQVSEISHWIPRKVSGQM-----------EGLQISSICCGPWHTAAITSAGK 423
            +  LG     +++  + P  +   +           + LQ ++IC G  HT AI++ G 
Sbjct: 154 AYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGA 213

Query: 424 LFTFGDGTFGALGHGDRSSTSVPR-------------EVETLKELKTVMASCGVWHTAAI 470
           +F++G   +G LG G  ++  VP               + +L E+ T   +    H   +
Sbjct: 214 IFSWGSNQYGQLGLGHCNAKLVPVPIHLDNSFERRAGHINSLGEIVTTDFTAKTIH-RIV 272

Query: 471 VEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV---AC 526
           V++A     S  L+ +  LF WG    GQLG GD+  + VP  VK S  + F K+   A 
Sbjct: 273 VDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGS--LEFVKINRMAL 330

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGK----FPTRIE 565
           G++ TI LT    VF+ GS ++ QLG     GK    FPT+I+
Sbjct: 331 GNNHTILLTKEQDVFTFGSNEFYQLGHGSIGGKNRLYFPTQIQ 373



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 163/369 (44%), Gaps = 69/369 (18%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           +++WG+G  G   H +  D  YP     L   N+  ++ G  H+ A+ ++ +   WG+  
Sbjct: 4   LYTWGKGKTGNTCHNI--DKKYPSPPSVLISLNLDQLSMGPNHSAAI-VNNECLMWGE-- 58

Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
               ++G+     H    K+  +    ++ S+ CG  HT  +TS  K+F+ G    G LG
Sbjct: 59  ----VMGR----KHTTLFKIVWKR---RVVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLG 107

Query: 437 HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
             +   ++VP  V+TL +   +    G   +AAI E               L+ WG  A 
Sbjct: 108 IENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITEAG------------DLYCWGSSAY 155

Query: 497 GQLGHGDAEPRV------------VPLCVK---VSDDISFCKVACGHSITIALTATGQVF 541
           GQLG+G    ++            +P   K   +  ++ +  +  G   TIA++ TG +F
Sbjct: 156 GQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIF 215

Query: 542 SMGSADYGQLGSPGSTGKF---PTRIEGNIK----------------------HRYIEDI 576
           S GS  YGQLG      K    P  ++ + +                      HR + DI
Sbjct: 216 SWGSNQYGQLGLGHCNAKLVPVPIHLDNSFERRAGHINSLGEIVTTDFTAKTIHRIVVDI 275

Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE-ALRDKQVKSVVCGSNFT 635
           ACG++H A+++ + +++ WG    GQLG GD+ ++  P  V+ +L   ++  +  G+N T
Sbjct: 276 ACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALGNNHT 335

Query: 636 AAICLHKGV 644
             +   + V
Sbjct: 336 ILLTKEQDV 344



 Score = 46.6 bits (109), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 66/175 (37%), Gaps = 44/175 (25%)

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS---DDISF--------------------- 521
           K L+TWG G  G   H   +    P  V +S   D +S                      
Sbjct: 2   KVLYTWGKGKTGNTCHNIDKKYPSPPSVLISLNLDQLSMGPNHSAAIVNNECLMWGEVMG 61

Query: 522 ---------------CKVACGHSITIALTATGQVFSMGSADYGQLGSPGST-GKFPTRIE 565
                            V+CG + T+ LT+  ++FSMG    GQLG         P  ++
Sbjct: 62  RKHTTLFKIVWKRRVVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIENVVDSAVPLPVD 121

Query: 566 GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ---TPTLV 617
              K   I+ I  G+   A ++   ++Y WG  A GQLG+G    K    TPT +
Sbjct: 122 TLSKFNVIK-IKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTI 175


>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
 gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
          Length = 526

 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 156/305 (51%), Gaps = 22/305 (7%)

Query: 299 QSIACGSKHAVL-VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
           Q+   G+ + VL +TK  ++F  G  S G LG G    +  P+ ID L+G  I  ++ G 
Sbjct: 23  QACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSILEPRRIDMLSGKRIVSLSYGS 82

Query: 358 F-HTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
             H   VT  G++Y+WG   HN    LG  S      P +VS  +   +  S+ CG  H+
Sbjct: 83  GPHVVIVTSDGEVYSWG---HNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHS 139

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVWHTAAIVEVA 474
             +T  G+++ +G    G +G G  ++  +PR+V +  + KTV+  +CG   + A+V+  
Sbjct: 140 MVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVD-- 197

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                 NG    +++ WG    GQLG G +  +  P  +     I   +V CG++ T+AL
Sbjct: 198 ------NG----EVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLAL 247

Query: 535 TATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKS-EV 592
           T  G +++ G+  YGQLG+   + + +P ++  + K R +E  AC S H +   S+S +V
Sbjct: 248 TDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVD-KERIVEIAACHSSHTSAAKSQSGQV 306

Query: 593 YTWGK 597
           Y WG+
Sbjct: 307 YMWGQ 311



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 111/226 (49%), Gaps = 19/226 (8%)

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +T   ++F  G  + G LG GD  S   PR ++ L   + V  S G      IV      
Sbjct: 36  LTKNDEVFVMGTNSSGCLGTGDAQSILEPRRIDMLSGKRIVSLSYGSGPHVVIVT----- 90

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK---VACGHSITIAL 534
                 S  ++++WG  A  QLG+G     + P   +VS ++   K   VACG   ++ L
Sbjct: 91  ------SDGEVYSWGHNAYSQLGNGSTNQALSP--CQVSTNLINKKAISVACGSHHSMVL 142

Query: 535 TATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
           T  G+V++ G  + GQ+GS GST     P ++   ++++ +  IACG      V    EV
Sbjct: 143 TCDGEVYAWGYNNSGQVGS-GSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEV 201

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           Y WG   NGQLG G + N+ TP  + AL+  +V+ VVCG   T A+
Sbjct: 202 YAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLAL 247



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 129/274 (47%), Gaps = 21/274 (7%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGS-KHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           + + D +  L P+ ++        S++ GS  H V+VT  G+++SWG  +  +LG+G   
Sbjct: 53  LGTGDAQSILEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTN 112

Query: 335 DVSYPKLI--DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI 392
               P  +  + +N   I  VACG  H+  +T  G++Y WG   +N G +G  S  +  I
Sbjct: 113 QALSPCQVSTNLINKKAIS-VACGSHHSMVLTCDGEVYAWG--YNNSGQVGSGSTANQPI 169

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
           PRKV+  ++   +  I CG   + A+   G+++ +G    G LG G   +   P  +  L
Sbjct: 170 PRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAAL 229

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC 512
           + ++     CG  HT A+ +               ++ WG  + GQLG G+   +  P+ 
Sbjct: 230 QGIRVEQVVCGYAHTLALTD------------EGVMYAWGANSYGQLGTGNKSNQSYPVQ 277

Query: 513 VKVSDDISFCKVACGHS--ITIALTATGQVFSMG 544
           V V D     ++A  HS   + A + +GQV+  G
Sbjct: 278 VIV-DKERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 28/272 (10%)

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC--CGPWHTAAITSAGKLFTFGDGTF 432
           G ++ G LG     S   PR++   + G +I S+    GP H   +TS G+++++G   +
Sbjct: 46  GTNSSGCLGTGDAQSILEPRRID-MLSGKRIVSLSYGSGP-HVVIVTSDGEVYSWGHNAY 103

Query: 433 GALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
             LG+G  +    P +V T L   K +  +CG  H+  +                +++ W
Sbjct: 104 SQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLT------------CDGEVYAW 151

Query: 492 GDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           G    GQ+G G       PR V  C++    I    +ACG   ++A+   G+V++ G   
Sbjct: 152 GYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIG---IACGQMSSMAVVDNGEVYAWGYNG 208

Query: 548 YGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
            GQLG  GS+G  PT  RI   ++   +E + CG  H   ++ +  +Y WG  + GQLG 
Sbjct: 209 NGQLG-LGSSGNQPTPCRIAA-LQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGT 266

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           G+  N+  P  V   +++ V+   C S+ T+A
Sbjct: 267 GNKSNQSYPVQVIVDKERIVEIAACHSSHTSA 298



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 19/180 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK----VLESTVVLDAQSIACGSKHA 308
           G+V+ WG            N  ++ S    +  +P+     L++  V+    IACG   +
Sbjct: 146 GEVYAWGYN----------NSGQVGSGSTANQPIPRKVTSCLQNKTVI---GIACGQMSS 192

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           + V   G++++WG    G+LG G   +   P  I AL G  +  V CG  HT A+T  G 
Sbjct: 193 MAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGV 252

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +Y W  G ++ G LG  ++ +   P +V    E +   + C     +AA + +G+++ +G
Sbjct: 253 MYAW--GANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310


>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
          Length = 526

 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 156/305 (51%), Gaps = 22/305 (7%)

Query: 299 QSIACGSKHAVL-VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
           Q+   G+ + VL +TK  ++F  G  S G LG G    +  P+ ID L+G  I  ++ G 
Sbjct: 23  QACVFGAGNEVLYLTKNDEVFVMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGS 82

Query: 358 F-HTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
             H   VT  G++Y+WG   HN    LG  S      P +VS  +   +  S+ CG  H+
Sbjct: 83  GPHVVIVTSDGEVYSWG---HNAYSQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHS 139

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVWHTAAIVEVA 474
             +T  G+++ +G    G +G G  ++  +PR+V +  + KTV+  +CG   + A+V+  
Sbjct: 140 MVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVD-- 197

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
                 NG    +++ WG    GQLG G +  +  P  +     I   +V CG++ T+AL
Sbjct: 198 ------NG----EVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLAL 247

Query: 535 TATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKS-EV 592
           T  G +++ G+  YGQLG+   + + +P ++  + K R +E  AC S H +   S+S +V
Sbjct: 248 TDEGVMYAWGANSYGQLGTGNKSNQSYPVQVIVD-KERIVEIAACHSSHTSAAKSQSGQV 306

Query: 593 YTWGK 597
           Y WG+
Sbjct: 307 YMWGQ 311



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 111/226 (49%), Gaps = 19/226 (8%)

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +T   ++F  G  + G LG GD  S   PR ++ L   + V  S G      IV      
Sbjct: 36  LTKNDEVFVMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVT----- 90

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK---VACGHSITIAL 534
                 S  ++++WG  A  QLG+G     + P   +VS ++   K   VACG   ++ L
Sbjct: 91  ------SDGEVYSWGHNAYSQLGNGSTNQALSP--CQVSTNLINKKAISVACGSHHSMVL 142

Query: 535 TATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
           T  G+V++ G  + GQ+GS GST     P ++   ++++ +  IACG      V    EV
Sbjct: 143 TCDGEVYAWGYNNSGQVGS-GSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEV 201

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           Y WG   NGQLG G + N+ TP  + AL+  +V+ VVCG   T A+
Sbjct: 202 YAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLAL 247



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 129/274 (47%), Gaps = 21/274 (7%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGS-KHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           + + D +  + P+ ++        S++ GS  H V+VT  G+++SWG  +  +LG+G   
Sbjct: 53  LGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTN 112

Query: 335 DVSYPKLI--DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI 392
               P  +  + +N   I  VACG  H+  +T  G++Y WG   +N G +G  S  +  I
Sbjct: 113 QALSPCQVSTNLINKKAIS-VACGSHHSMVLTCDGEVYAWG--YNNSGQVGSGSTANQPI 169

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
           PRKV+  ++   +  I CG   + A+   G+++ +G    G LG G   +   P  +  L
Sbjct: 170 PRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAAL 229

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC 512
           + ++     CG  HT A+ +               ++ WG  + GQLG G+   +  P+ 
Sbjct: 230 QGIRVEQVVCGYAHTLALTD------------EGVMYAWGANSYGQLGTGNKSNQSYPVQ 277

Query: 513 VKVSDDISFCKVACGHS--ITIALTATGQVFSMG 544
           V V D     ++A  HS   + A + +GQV+  G
Sbjct: 278 VIV-DKERIVEIAACHSSHTSAAKSQSGQVYMWG 310



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 28/272 (10%)

Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC--CGPWHTAAITSAGKLFTFGDGTF 432
           G ++ G LG     S   PR++   + G +I S+    GP H   +TS G+++++G   +
Sbjct: 46  GTNSSGCLGTGDAQSIIEPRRID-MLSGKRIVSLSYGSGP-HVVIVTSDGEVYSWGHNAY 103

Query: 433 GALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
             LG+G  +    P +V T L   K +  +CG  H+  +                +++ W
Sbjct: 104 SQLGNGSTNQALSPCQVSTNLINKKAISVACGSHHSMVLT------------CDGEVYAW 151

Query: 492 GDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           G    GQ+G G       PR V  C++    I    +ACG   ++A+   G+V++ G   
Sbjct: 152 GYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIG---IACGQMSSMAVVDNGEVYAWGYNG 208

Query: 548 YGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
            GQLG  GS+G  PT  RI   ++   +E + CG  H   ++ +  +Y WG  + GQLG 
Sbjct: 209 NGQLG-LGSSGNQPTPCRIAA-LQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGT 266

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           G+  N+  P  V   +++ V+   C S+ T+A
Sbjct: 267 GNKSNQSYPVQVIVDKERIVEIAACHSSHTSA 298



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 84/180 (46%), Gaps = 19/180 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK----VLESTVVLDAQSIACGSKHA 308
           G+V+ WG            N  ++ S    +  +P+     L++  V+    IACG   +
Sbjct: 146 GEVYAWGYN----------NSGQVGSGSTANQPIPRKVTSCLQNKTVI---GIACGQMSS 192

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           + V   G++++WG    G+LG G   +   P  I AL G  +  V CG  HT A+T  G 
Sbjct: 193 MAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTDEGV 252

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +Y W  G ++ G LG  ++ +   P +V    E +   + C     +AA + +G+++ +G
Sbjct: 253 MYAW--GANSYGQLGTGNKSNQSYPVQVIVDKERIVEIAACHSSHTSAAKSQSGQVYMWG 310


>gi|440801355|gb|ELR22375.1| regulator of chromosome condensation, RCC1, putative [Acanthamoeba
           castellanii str. Neff]
          Length = 395

 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 174/355 (49%), Gaps = 44/355 (12%)

Query: 289 VLESTVVLDAQ---SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
           VL     L+A    +++ G  H++++T++G++FS+G G  G+LGHG E     P+ I   
Sbjct: 27  VLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFSFGNGLHGRLGHGNEETCFEPRRIAFF 86

Query: 346 NGS-NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           + +  +  ++ G  H+ A+T  G  Y++G G+   G LG   E    +PR+++ +  G  
Sbjct: 87  DTTAGVAKISAGTTHSLALTKDGKAYSFGFGM--FGRLGHGDETDQLLPREITLRGHGAS 144

Query: 405 ---------------ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV 449
                          I  +  G +H+  +T+ G++++FG G  GALGHGDR     P  +
Sbjct: 145 PPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRLRPTMI 204

Query: 450 ETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG-DGAE-GQLGHGDAEPR 507
           E L + + V  +CG  +T  + +              ++F +G D +E  +   G A   
Sbjct: 205 EALADRRIVSMACGSANTLVLDD------------EGRVFFFGLDYSEFPKFTEGQARFV 252

Query: 508 VVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIE- 565
           ++P  + ++++I+  +   GH +   LT  G++ + G    G+LG    T +  PT +  
Sbjct: 253 LLPSALGLAEEITEVRAGEGHCLL--LTREGKLLAFGLGKNGRLGLGDETNRLAPTAVTF 310

Query: 566 -GNIKHRYIEDIACGSYH-IAVVSSKSE---VYTWGKGANGQLGHGDNENKQTPT 615
             N       DIACG+ H +A+V    E   +Y +G G  GQL +G  +++ +PT
Sbjct: 311 PSNGTTSVEIDIACGAKHGLALVDVPGEGPRLYAFGSGDQGQLANGHRQDRASPT 365



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 154/332 (46%), Gaps = 53/332 (15%)

Query: 314 QGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           +G + S G G  G LG G     +S    I AL    +  V+ G  H+  +T  G ++++
Sbjct: 2   RGVVLSAGGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTEEGRVFSF 61

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           G+G+H  G LG  +E + + PR+++       ++ I  G  H+ A+T  GK ++FG G F
Sbjct: 62  GNGLH--GRLGHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAYSFGFGMF 119

Query: 433 GALGHGDRSSTSVPREVETLK---------------ELKTVM--ASCGVWHTAAIVEVAG 475
           G LGHGD +   +PRE+ TL+               E   V+   + G +H+  +     
Sbjct: 120 GRLGHGDETDQLLPREI-TLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLT---- 174

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
                   +  +++++G G  G LGHGD + R+ P  ++   D     +ACG + T+ L 
Sbjct: 175 --------TDGRVYSFGAGVMGALGHGDRDKRLRPTMIEALADRRIVSMACGSANTLVLD 226

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH----------RYIEDIACGSYHIAV 585
             G+VF  G  DY +         FP   EG  +             I ++  G  H  +
Sbjct: 227 DEGRVFFFG-LDYSE---------FPKFTEGQARFVLLPSALGLAEEITEVRAGEGHCLL 276

Query: 586 VSSKSEVYTWGKGANGQLGHGDNENKQTPTLV 617
           ++ + ++  +G G NG+LG GD  N+  PT V
Sbjct: 277 LTREGKLLAFGLGKNGRLGLGDETNRLAPTAV 308



 Score =  106 bits (265), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 115/235 (48%), Gaps = 30/235 (12%)

Query: 422 GKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           G + + G G  G+LG GD  +  SV   +  L+  + V  S G  H+  + E        
Sbjct: 3   GVVLSAGGGQHGSLGQGDAVTQLSVLTPIRALEAHRVVAVSAGGHHSLVLTE-------- 54

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS-FCKVACGHSITIALTATGQ 539
                 ++F++G+G  G+LGHG+ E    P  +   D  +   K++ G + ++ALT  G+
Sbjct: 55  ----EGRVFSFGNGLHGRLGHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGK 110

Query: 540 VFSMGSADYGQLG----------------SPGSTGKFPTRIEGNIKHRYIEDIACGSYHI 583
            +S G   +G+LG                  G++     R+E N     IE +A G +H 
Sbjct: 111 AYSFGFGMFGRLGHGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHS 170

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            ++++   VY++G G  G LGHGD + +  PT++EAL D+++ S+ CGS  T  +
Sbjct: 171 LLLTTDGRVYSFGAGVMGALGHGDRDKRLRPTMIEALADRRIVSMACGSANTLVL 225



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 102/231 (44%), Gaps = 34/231 (14%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + +A G  H++L+T  G+++S+G G  G LGHG       P +I+AL    I  +ACG  
Sbjct: 161 EHVAAGYFHSLLLTTDGRVYSFGAGVMGALGHGDRDKRLRPTMIEALADRRIVSMACGSA 220

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQME--------GL--QISSI 408
           +T  +   G ++ +G            SE     P+   GQ          GL  +I+ +
Sbjct: 221 NTLVLDDEGRVFFFGL---------DYSE----FPKFTEGQARFVLLPSALGLAEEITEV 267

Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT---VMASCGVW 465
             G  H   +T  GKL  FG G  G LG GD ++   P  V       T   +  +CG  
Sbjct: 268 RAGEGHCLLLTREGKLLAFGLGKNGRLGLGDETNRLAPTAVTFPSNGTTSVEIDIACGAK 327

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
           H  A+V+V G+          +L+ +G G +GQL +G  + R  P     S
Sbjct: 328 HGLALVDVPGE--------GPRLYAFGSGDQGQLANGHRQDRASPTATTTS 370



 Score = 47.0 bits (110), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 80/193 (41%), Gaps = 13/193 (6%)

Query: 267 LGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGG 326
            G  V G  +   DR   L P ++E+       S+ACGS + +++  +G++F +G     
Sbjct: 182 FGAGVMGA-LGHGDRDKRLRPTMIEALADRRIVSMACGSANTLVLDDEGRVFFFGLDY-S 239

Query: 327 KLGHGVEADVSYPKLIDALN-GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
           +     E    +  L  AL     I  V  GE H   +T  G L  +G G +  G LG  
Sbjct: 240 EFPKFTEGQARFVLLPSALGLAEEITEVRAGEGHCLLLTREGKLLAFGLGKN--GRLGLG 297

Query: 386 SEISHWIPRKVSGQMEG---LQISSICCGPWHTAAIT----SAGKLFTFGDGTFGALGHG 438
            E +   P  V+    G   ++I  I CG  H  A+        +L+ FG G  G L +G
Sbjct: 298 DETNRLAPTAVTFPSNGTTSVEI-DIACGAKHGLALVDVPGEGPRLYAFGSGDQGQLANG 356

Query: 439 DRSSTSVPREVET 451
            R   + P    T
Sbjct: 357 HRQDRASPTATTT 369


>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 862

 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 155/342 (45%), Gaps = 28/342 (8%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           +IA G  H + V + G +++WG  + G+LG G   +   P  +  L G  +  ++ GE H
Sbjct: 211 AIAAGDYHTLAVRQDGTVWAWGNNALGQLGDGTYTERLTPVQVPGLTG--VTAISAGESH 268

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           T AV   G ++ WGD +   G LG  +      P +V G + G  +++I  G  HT A+ 
Sbjct: 269 TVAVRQDGTVWAWGDNV--WGQLGDGTRTDRLTPVQVPG-LSG--VTAIAEGRRHTFAVR 323

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G ++ +G   +G LG G RS    P +V  L  +  + A  G +HT A+ +       
Sbjct: 324 QDGTVWAWGLNFWGQLGDGTRSDRLTPVQVPDLTSVTAIAA--GDYHTLAVRQ------- 374

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                   ++ WGD   GQLG G    R+ P  V+V        +A G S T+A+   G 
Sbjct: 375 -----DGTVWAWGDNVWGQLGDGTYTDRLTP--VQVPGLTGVTAIAAGESHTVAMRQDGT 427

Query: 540 VFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           V++ G   +GQLG    T +  P ++        +  IA G YH   V     V  WG  
Sbjct: 428 VWAWGDNVWGQLGDGTYTDRLTPVQVP---DLTSVTAIAAGDYHTLAVRQDGTVCAWGFN 484

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQV-KSVVCGSNFTAAIC 639
           A GQLG G +    +P +V  L    V  ++  G + T A+ 
Sbjct: 485 AYGQLGDGTSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVM 526



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 154/340 (45%), Gaps = 29/340 (8%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           +IA G +H   V++ G +++WG+   G+LG G  AD   P  +  L G  +  +A G  H
Sbjct: 111 AIAAGRRHTFAVSQDGTVWAWGDNDWGQLGDGTRADRHTPVQLPELTG--VTAIAAGRRH 168

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           T AV   G ++ WGD  +  G LG  +  +   P +V G + G  +++I  G +HT A+ 
Sbjct: 169 TFAVRQDGTVWAWGD--NAWGQLGDGTRTNRLTPVQVPG-LTG--VTAIAAGDYHTLAVR 223

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G ++ +G+   G LG G  +    P +V  L  +  +  S G  HT A+ +       
Sbjct: 224 QDGTVWAWGNNALGQLGDGTYTERLTPVQVPGLTGVTAI--SAGESHTVAVRQ------- 274

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                   ++ WGD   GQLG G    R+ P  V+V        +A G   T A+   G 
Sbjct: 275 -----DGTVWAWGDNVWGQLGDGTRTDRLTP--VQVPGLSGVTAIAEGRRHTFAVRQDGT 327

Query: 540 VFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           V++ G   +GQLG    + +  P ++        +  IA G YH   V     V+ WG  
Sbjct: 328 VWAWGLNFWGQLGDGTRSDRLTPVQVP---DLTSVTAIAAGDYHTLAVRQDGTVWAWGDN 384

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             GQLG G   ++ TP  V  L    V ++  G + T A+
Sbjct: 385 VWGQLGDGTYTDRLTPVQVPGL--TGVTAIAAGESHTVAM 422



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 152/339 (44%), Gaps = 33/339 (9%)

Query: 303 CGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCA 362
            G  H V V + G  ++WG  + G+LG G   D   P  +  L G  +  VA G  HT A
Sbjct: 14  AGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTDRLTPVQVPGLTG--VTAVAAGRHHTFA 71

Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ-ISSICCGPWHTAAITSA 421
           V   G ++ WG     L + GQ+ + +H   R    Q+ GL  +++I  G  HT A++  
Sbjct: 72  VRQDGTVWAWG-----LNVWGQLGDGTH-TERHTPVQVPGLTGVTAIAAGRRHTFAVSQD 125

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVWHTAAIVEVAGKTSGS 480
           G ++ +GD  +G LG G R+    P +   L EL  V A + G  HT A+ +        
Sbjct: 126 GTVWAWGDNDWGQLGDGTRADRHTPVQ---LPELTGVTAIAAGRRHTFAVRQ-------- 174

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
                  ++ WGD A GQLG G    R+ P  V+V        +A G   T+A+   G V
Sbjct: 175 ----DGTVWAWGDNAWGQLGDGTRTNRLTP--VQVPGLTGVTAIAAGDYHTLAVRQDGTV 228

Query: 541 FSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
           ++ G+   GQLG    T +  P ++ G      +  I+ G  H   V     V+ WG   
Sbjct: 229 WAWGNNALGQLGDGTYTERLTPVQVPGLTG---VTAISAGESHTVAVRQDGTVWAWGDNV 285

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            GQLG G   ++ TP  V  L    V ++  G   T A+
Sbjct: 286 WGQLGDGTRTDRLTPVQVPGL--SGVTAIAEGRRHTFAV 322



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 165/365 (45%), Gaps = 31/365 (8%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           ++    R D L P  ++   +    ++A G  H   V + G +++WG    G+LG G   
Sbjct: 38  QLGDGTRTDRLTP--VQVPGLTGVTAVAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHT 95

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
           +   P  +  L G  +  +A G  HT AV+  G ++ WGD  ++ G LG  +      P 
Sbjct: 96  ERHTPVQVPGLTG--VTAIAAGRRHTFAVSQDGTVWAWGD--NDWGQLGDGTRADRHTPV 151

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           ++  ++ G  +++I  G  HT A+   G ++ +GD  +G LG G R++   P +V  L  
Sbjct: 152 QLP-ELTG--VTAIAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGLTG 208

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
           +  + A  G +HT A+ +               ++ WG+ A GQLG G    R+ P  V+
Sbjct: 209 VTAIAA--GDYHTLAVRQ------------DGTVWAWGNNALGQLGDGTYTERLTP--VQ 252

Query: 515 VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYI 573
           V        ++ G S T+A+   G V++ G   +GQLG    T +  P ++ G      +
Sbjct: 253 VPGLTGVTAISAGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTDRLTPVQVPGLSG---V 309

Query: 574 EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSN 633
             IA G  H   V     V+ WG    GQLG G   ++ TP  V  L    V ++  G  
Sbjct: 310 TAIAEGRRHTFAVRQDGTVWAWGLNFWGQLGDGTRSDRLTPVQVPDL--TSVTAIAAGDY 367

Query: 634 FTAAI 638
            T A+
Sbjct: 368 HTLAV 372



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 166/355 (46%), Gaps = 32/355 (9%)

Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
           ++P +   TV     ++A G  H V V + G +++WG  + G+LG G   D   P  I  
Sbjct: 502 MVPGLTGVTVF---AALAAGDSHTVAVMQDGTVWAWGLNASGQLGDGATIDRRIPVQIPG 558

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ 404
           L G  +  +A G  HT A    G +++W  G ++ G LG  +      P +V G + G  
Sbjct: 559 LAG--VTAIAAGSAHTLAAGQDGAVWSW--GANSYGQLGDGTTTHRLSPVQVPG-LTG-- 611

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           +S++  G  H+ A+   G +  +G  ++G LG G  ++   P +V  L  +  V A  G 
Sbjct: 612 VSAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAARLTPVQVHGLTGVTAVAA--GS 669

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
            HT A+ +               ++ WG    GQLG G    R+ P+ V+   D++   +
Sbjct: 670 LHTVALRQ------------DGTVWAWGYNDLGQLGDGTTTRRLAPVQVQGLTDVT--AI 715

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHI 583
           A G+  T+A+   G V++ G   +GQLG   ST +  P +++   +   +  +A G  H 
Sbjct: 716 AAGYFHTVAVRQDGTVWAWGYNLWGQLGDGSSTARSTPVQVQ---ELTGVSALAAGYAHT 772

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             V     V+ WG  +  QLG+G + ++ TP  VE L    V ++  G   TAA+
Sbjct: 773 VAVKQDGTVWAWGNNSGTQLGNGSSTDRYTPVWVEGL--TGVSALTAGRFHTAAV 825



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 149/316 (47%), Gaps = 27/316 (8%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           +IA GS H +   + G ++SWG  S G+LG G       P  +  L G  +  +A G+ H
Sbjct: 564 AIAAGSAHTLAAGQDGAVWSWGANSYGQLGDGTTTHRLSPVQVPGLTG--VSAMAAGDAH 621

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           + A+   G +  WG   ++ G LG  +  +   P +V G + G  ++++  G  HT A+ 
Sbjct: 622 SVALLQDGTVSAWGR--NSWGQLGDGTTAARLTPVQVHG-LTG--VTAVAAGSLHTVALR 676

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G ++ +G    G LG G  +    P +V+ L ++  + A  G +HT A+ +       
Sbjct: 677 QDGTVWAWGYNDLGQLGDGTTTRRLAPVQVQGLTDVTAIAA--GYFHTVAVRQ------- 727

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                   ++ WG    GQLG G +  R  P  V+V +      +A G++ T+A+   G 
Sbjct: 728 -----DGTVWAWGYNLWGQLGDGSSTARSTP--VQVQELTGVSALAAGYAHTVAVKQDGT 780

Query: 540 VFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           V++ G+    QLG+  ST ++ P  +EG      +  +  G +H A VS +   + WG+ 
Sbjct: 781 VWAWGNNSGTQLGNGSSTDRYTPVWVEGLTG---VSALTAGRFHTAAVSPEGFGWAWGRN 837

Query: 599 ANGQLGHGDNENKQTP 614
             GQ+G G   ++  P
Sbjct: 838 NFGQVGDGTTADRPRP 853



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 126/292 (43%), Gaps = 27/292 (9%)

Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISS 407
           + +     GE+HT AV   G  + WG+  +  G LG  +      P +V G + G  +++
Sbjct: 7   TGVTATTAGEYHTVAVRQDGTAWAWGN--NAWGQLGDGTRTDRLTPVQVPG-LTG--VTA 61

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
           +  G  HT A+   G ++ +G   +G LG G  +    P +V  L  +  + A  G  HT
Sbjct: 62  VAAGRHHTFAVRQDGTVWAWGLNVWGQLGDGTHTERHTPVQVPGLTGVTAIAA--GRRHT 119

Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
            A+ +               ++ WGD   GQLG G    R  P  V++ +      +A G
Sbjct: 120 FAVSQ------------DGTVWAWGDNDWGQLGDGTRADRHTP--VQLPELTGVTAIAAG 165

Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVV 586
              T A+   G V++ G   +GQLG    T +  P ++ G      +  IA G YH   V
Sbjct: 166 RRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGLTG---VTAIAAGDYHTLAV 222

Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
                V+ WG  A GQLG G    + TP  V  L    V ++  G + T A+
Sbjct: 223 RQDGTVWAWGNNALGQLGDGTYTERLTPVQVPGL--TGVTAISAGESHTVAV 272



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 104/242 (42%), Gaps = 23/242 (9%)

Query: 399 QMEGLQ-ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
           Q+ GL  +++   G +HT A+   G  + +G+  +G LG G R+    P +V  L  +  
Sbjct: 2   QVPGLTGVTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTDRLTPVQVPGLTGVTA 61

Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
           V A  G  HT A+ +               ++ WG    GQLG G    R  P  V+V  
Sbjct: 62  VAA--GRHHTFAVRQ------------DGTVWAWGLNVWGQLGDGTHTERHTP--VQVPG 105

Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDI 576
                 +A G   T A++  G V++ G  D+GQLG      +  P ++    +   +  I
Sbjct: 106 LTGVTAIAAGRRHTFAVSQDGTVWAWGDNDWGQLGDGTRADRHTPVQLP---ELTGVTAI 162

Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTA 636
           A G  H   V     V+ WG  A GQLG G   N+ TP  V  L    V ++  G   T 
Sbjct: 163 AAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGL--TGVTAIAAGDYHTL 220

Query: 637 AI 638
           A+
Sbjct: 221 AV 222



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 109/256 (42%), Gaps = 47/256 (18%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           ++A G  H+V + + G + +WG  S G+LG G  A    P  +  L G  +  VA G  H
Sbjct: 614 AMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAARLTPVQVHGLTG--VTAVAAGSLH 671

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           T A+   G ++ WG   ++LG LG  +      P +V G  +   +++I  G +HT A+ 
Sbjct: 672 TVALRQDGTVWAWG--YNDLGQLGDGTTTRRLAPVQVQGLTD---VTAIAAGYFHTVAVR 726

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI-----VEVA 474
             G ++ +G   +G LG G  ++ S P +V+ L  +  + A     HT A+     V   
Sbjct: 727 QDGTVWAWGYNLWGQLGDGSSTARSTPVQVQELTGVSALAAGYA--HTVAVKQDGTVWAW 784

Query: 475 GKTSGS---NGLSSKKL------------------------------FTWGDGAEGQLGH 501
           G  SG+   NG S+ +                               + WG    GQ+G 
Sbjct: 785 GNNSGTQLGNGSSTDRYTPVWVEGLTGVSALTAGRFHTAAVSPEGFGWAWGRNNFGQVGD 844

Query: 502 GDAEPRVVPLCVKVSD 517
           G    R  P+ V + +
Sbjct: 845 GTTADRPRPVDVVIQE 860



 Score = 66.2 bits (160), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 13/163 (7%)

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG 356
           D  +IA G  H V V + G +++WG    G+LG G     S P  +  L G  +  +A G
Sbjct: 711 DVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGSSTARSTPVQVQELTG--VSALAAG 768

Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGL-LGQVSEISHWIPRKVSGQMEGLQ-ISSICCGPWH 414
             HT AV   G ++ WG+   N G  LG  S    + P  V    EGL  +S++  G +H
Sbjct: 769 YAHTVAVKQDGTVWAWGN---NSGTQLGNGSSTDRYTPVWV----EGLTGVSALTAGRFH 821

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
           TAA++  G  + +G   FG +  GD ++   PR V+ + +  T
Sbjct: 822 TAAVSPEGFGWAWGRNNFGQV--GDGTTADRPRPVDVVIQEGT 862


>gi|66809941|ref|XP_638694.1| inositol 5-phosphatase [Dictyostelium discoideum AX4]
 gi|60467249|gb|EAL65282.1| inositol 5-phosphatase [Dictyostelium discoideum AX4]
          Length = 1800

 Score =  126 bits (316), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 159/341 (46%), Gaps = 52/341 (15%)

Query: 256 FIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQG 315
            +WGE +G                 R+   L K++    V+   S++CG  H +L+T + 
Sbjct: 54  LMWGEVMG-----------------RKHTTLFKIVWKRRVV---SVSCGFNHTLLLTSEY 93

Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
           +IFS G    G+LG     D + P  +D L+  N+  +  G   + A+T +GDLY WG  
Sbjct: 94  KIFSMGFNQTGQLGIENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITEAGDLYCWGSS 153

Query: 376 IH-NLGLLGQVSEISHWIPRKVSGQM-----------EGLQISSICCGPWHTAAITSAGK 423
            +  LG     +++  + P  +   +           + LQ ++IC G  HT AI++ G 
Sbjct: 154 AYGQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGA 213

Query: 424 LFTFGDGTFGALGHGDRSSTSVPR-------------EVETLKELKTVMASCGVWHTAAI 470
           +F++G   +G LG G  ++  VP               + +L E+ T   +    H   +
Sbjct: 214 IFSWGSNQYGQLGLGHCNAKLVPVPIHLDNSFERRAGHINSLGEIVTTDFTAKTIH-RIV 272

Query: 471 VEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVS-DDISFCKVACGH 528
           V++A     S  L+ +  LF WG    GQLG GD+  + VP  VK S + +   ++A G+
Sbjct: 273 VDIACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALGN 332

Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGK----FPTRIE 565
           + TI LT    VF+ GS ++ QLG     GK    FPT+I+
Sbjct: 333 NHTILLTKEQDVFTFGSNEFYQLGHGSIGGKNRLYFPTQIQ 373



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 163/369 (44%), Gaps = 69/369 (18%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           +++WG+G  G   H +  D  YP     L   N+  ++ G  H+ A+ ++ +   WG+  
Sbjct: 4   LYTWGKGKTGNTCHNI--DKKYPSPPSVLISLNLDQLSMGPNHSAAI-VNNECLMWGE-- 58

Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
               ++G+     H    K+  +    ++ S+ CG  HT  +TS  K+F+ G    G LG
Sbjct: 59  ----VMGR----KHTTLFKIVWKR---RVVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLG 107

Query: 437 HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
             +   ++VP  V+TL +   +    G   +AAI E               L+ WG  A 
Sbjct: 108 IENVVDSAVPLPVDTLSKFNVIKIKAGNNVSAAITEAG------------DLYCWGSSAY 155

Query: 497 GQLGHGDAEPRV------------VPLCVK---VSDDISFCKVACGHSITIALTATGQVF 541
           GQLG+G    ++            +P   K   +  ++ +  +  G   TIA++ TG +F
Sbjct: 156 GQLGNGKMNAKLHSFTPTTILNPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIF 215

Query: 542 SMGSADYGQLGSPGSTGKF---PTRIEGNIK----------------------HRYIEDI 576
           S GS  YGQLG      K    P  ++ + +                      HR + DI
Sbjct: 216 SWGSNQYGQLGLGHCNAKLVPVPIHLDNSFERRAGHINSLGEIVTTDFTAKTIHRIVVDI 275

Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE-ALRDKQVKSVVCGSNFT 635
           ACG++H A+++ + +++ WG    GQLG GD+ ++  P  V+ +L   ++  +  G+N T
Sbjct: 276 ACGNFHSALLTLEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALGNNHT 335

Query: 636 AAICLHKGV 644
             +   + V
Sbjct: 336 ILLTKEQDV 344



 Score = 46.6 bits (109), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 66/175 (37%), Gaps = 44/175 (25%)

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS---DDISF--------------------- 521
           K L+TWG G  G   H   +    P  V +S   D +S                      
Sbjct: 2   KVLYTWGKGKTGNTCHNIDKKYPSPPSVLISLNLDQLSMGPNHSAAIVNNECLMWGEVMG 61

Query: 522 ---------------CKVACGHSITIALTATGQVFSMGSADYGQLGSPGST-GKFPTRIE 565
                            V+CG + T+ LT+  ++FSMG    GQLG         P  ++
Sbjct: 62  RKHTTLFKIVWKRRVVSVSCGFNHTLLLTSEYKIFSMGFNQTGQLGIENVVDSAVPLPVD 121

Query: 566 GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ---TPTLV 617
              K   I+ I  G+   A ++   ++Y WG  A GQLG+G    K    TPT +
Sbjct: 122 TLSKFNVIK-IKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTI 175


>gi|449435362|ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 608

 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 172/399 (43%), Gaps = 74/399 (18%)

Query: 303 CGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN---IHMVACGEFH 359
            G +  V+   + +++SWG G+  +LG G   D + P+L+   + S+   I  ++CG  H
Sbjct: 216 VGLREVVVDDVEQELWSWGAGTDAQLGTGRLEDNNLPQLVRTPSLSSAPAISFLSCGGAH 275

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
             A+T  G + TWG G  N G LG    IS   P+ V  ++    I+ +  G  H+  ++
Sbjct: 276 VIALTAGGGVLTWGRG--NSGQLGLGDMISSLHPKPVM-RLGSYFITHVSAGWSHSGFVS 332

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             GKL+T GDG+FG LGHGD      P EV    +      +CG+ H+ A+V+       
Sbjct: 333 DEGKLYTCGDGSFGQLGHGDYQLRCFPEEVLFFSDKHVDKIACGMRHSLALVK------- 385

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLC-------------------------- 512
             G S ++++ +G G  GQLG       V +P+                           
Sbjct: 386 --GSSGEQVYGFGAGKRGQLGISKKIQTVNLPILSSNLEAAEIVGIAAGGDHSAALSAEG 443

Query: 513 --------VKVSDDI----------SFCKVACGHSITIALTATGQVFSMGSADYGQLGS- 553
                    K + D+          SF KVA G +  + LT  G+++ +G   +G L   
Sbjct: 444 HLYTWGRGFKSTSDVYSPQHLPSPSSFSKVALGWNHALVLTDEGELYMLGGKHHGALSDS 503

Query: 554 ---------PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
                    PG + +   +    +    + DIA G+ H  +V+    V TWG G +GQLG
Sbjct: 504 EMLNSMKSLPGDSREDNFQAVPALSGIKVLDIAAGAEHSVIVTEDGGVKTWGWGEHGQLG 563

Query: 605 HG---DNENKQTPTLVEALRDKQVK-SVVCGSNFTAAIC 639
            G   D+ N QT  L   L        V CGS FT A+ 
Sbjct: 564 LGDTCDHTNPQTVNLNLKLESTAYDVKVYCGSGFTVAVA 602



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 108/255 (42%), Gaps = 41/255 (16%)

Query: 301 IACGSKHAVLVTKQG---QIFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACG 356
           IACG +H++ + K     Q++ +G G  G+LG   +   V+ P L   L  + I  +A G
Sbjct: 373 IACGMRHSLALVKGSSGEQVYGFGAGKRGQLGISKKIQTVNLPILSSNLEAAEIVGIAAG 432

Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
             H+ A++  G LYTWG G  +      V    H +P   S        S +  G  H  
Sbjct: 433 GDHSAALSAEGHLYTWGRGFKSTS---DVYSPQH-LPSPSS-------FSKVALGWNHAL 481

Query: 417 AITSAGKLFTFGDGTFGALGHGD--RSSTSVP--------REVETLKELKTVMASCGVWH 466
            +T  G+L+  G    GAL   +   S  S+P        + V  L  +K +  + G  H
Sbjct: 482 VLTDEGELYMLGGKHHGALSDSEMLNSMKSLPGDSREDNFQAVPALSGIKVLDIAAGAEH 541

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA----EPRVVPLCVKVSDDISFC 522
           +  + E  G            + TWG G  GQLG GD      P+ V L +K+       
Sbjct: 542 SVIVTEDGG------------VKTWGWGEHGQLGLGDTCDHTNPQTVNLNLKLESTAYDV 589

Query: 523 KVACGHSITIALTAT 537
           KV CG   T+A+  +
Sbjct: 590 KVYCGSGFTVAVATS 604


>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1457

 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 164/343 (47%), Gaps = 31/343 (9%)

Query: 299  QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
            +++   ++HAV +   G + +WG+ + G+LG G     + P ++  L G  +  V+ G +
Sbjct: 1109 RTVRAWAQHAVALMADGTVQAWGDNAHGQLGDGTTERRAAPVVVRGLTG--VVAVSTGAW 1166

Query: 359  HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
            H+ A+   G ++ WG   +  G LG  + +S   P +V+G     ++ +I  G +H  A+
Sbjct: 1167 HSLALRSDGTVWAWG--ANGFGQLGDGTTLSRTTPVRVAGLQ---KVVAIGAGGYHALAV 1221

Query: 419  TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
             S G ++ +G   FG LG G   S  +P  VE L  + +V  + G  H+ A+        
Sbjct: 1222 RSDGSVWAWGYNAFGQLGDGTAESRLLPVRVEGLSNVTSV--AGGDHHSLAL-------- 1271

Query: 479  GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
                L+   L  WG+ A GQLG G    R   + VK  D +   +    H  T+AL   G
Sbjct: 1272 ----LADGSLGAWGNNAAGQLGDGTGTTRYSRVWVKGVDGVVEVRAGAAH--TLALRGDG 1325

Query: 539  QVFSMGSADYGQLGSPGSTGK---FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
             V++ G   + QLG+   + +    P  + G      +  I  G+ H   V  K  V+ W
Sbjct: 1326 TVWTWGDNTHSQLGAGDDSTRTRIVPRPVPG---LSGVTAIGAGARHSFAVGPKGTVWAW 1382

Query: 596  GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G+ ++GQLG GDN N+  P  V+ L   +V  V  G++F+ A+
Sbjct: 1383 GRNSHGQLGLGDNANRAEPLRVKEL--AEVSVVSGGADFSLAM 1423



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 192/433 (44%), Gaps = 48/433 (11%)

Query: 230 RISLSSAVSSSSQGSCHEDF-DGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK 288
           RI++++     + GS H  +    G V+ WG G  +G LGG     E +   R   L P 
Sbjct: 44  RITVTAPPMRIAAGSQHSLYVSPTGAVWAWG-GNTSGQLGG-----EATPLQR---LAPA 94

Query: 289 VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
            L S    D  S+  G  H++ + + G +++WG  S G+LG G   D   P  +  L  +
Sbjct: 95  PLPSP--RDIVSVVSGEAHSLALDEAGTVWAWGGNSSGQLGDGTTTDRVTPMQVAGL--T 150

Query: 349 NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSI 408
           ++  VA G+FH+ A+   G ++ WG   H  G LG+        P  V G +EG  + ++
Sbjct: 151 DVVAVAAGDFHSLALRGDGTVWAWGTNFH--GQLGRGHTEPGLTPEPVPG-LEG--VVAL 205

Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTA 468
             G   T A+   G +  +G  + G LG G  +    P EV  +  +  V A  G +H  
Sbjct: 206 AAGFDFTLAVMDDGTVRAWGANSSGQLGDGTFTQRLAPVEVAHISGISAVTA--GTYHAV 263

Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH 528
           A+    GK  G        ++TWG  + GQLG G    R VP  V   + +    VA   
Sbjct: 264 AL----GKDGG--------VWTWGANSSGQLGDGAWSDRAVPARVPGLERVK--AVASMD 309

Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVS 587
           + ++AL   G V + G+   GQLG  G+  +  P  + G    R +  +  G+ H   + 
Sbjct: 310 ASSLALLEAGSVLAWGANGSGQLGDSGTDDRATPGEVPG---LRSVAAVVGGAQHALALR 366

Query: 588 SKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
               ++ WG G  GQLGHG +E    P  +  LR   V S+  GS        H   ++ 
Sbjct: 367 GDGTLWAWGGGLAGQLGHGGSERHVVPAPL--LRLADVASMAAGS-------FHSLAALG 417

Query: 648 DHSICSGCRNQFN 660
           D ++ S  RN + 
Sbjct: 418 DGTVWSWGRNTYG 430



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 163/385 (42%), Gaps = 59/385 (15%)

Query: 299  QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
             S+A G  H +   + G +++WG    G+LG G       P  +  L G  +  V+ G  
Sbjct: 903  MSVALGETHGLAAGEDGALWAWGANGSGQLGEGSTTPSPTPVRVKGLEG--VASVSAGRA 960

Query: 359  HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
             + AV   G  + W  G +  G LG  +  S  +P++V+      ++ ++  G  H  A+
Sbjct: 961  FSLAVRQDGTAWAW--GANPSGQLGDGTNHSQRVPKQVTSVK---RVRAMSAGAHHVVAL 1015

Query: 419  TSAGKLFTFGDGTFGALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
               G ++T+GD T G LG G  + T + PR+V  L++++ V A    +  A +V      
Sbjct: 1016 GEDGAVWTWGDNTLGQLGDGTSAPTWMWPRQVPELRDVEAVAAGE-QFSVAVLVGGGAHA 1074

Query: 478  SGSN-------GLSSKKLF-----------------------------------TWGDGA 495
             GSN       G +  +L                                     WGD A
Sbjct: 1075 WGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQPVRTVRAWAQHAVALMADGTVQAWGDNA 1134

Query: 496  EGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG 555
             GQLG G  E R  P+ V+    +        HS  +AL + G V++ G+  +GQLG   
Sbjct: 1135 HGQLGDGTTERRAAPVVVRGLTGVVAVSTGAWHS--LALRSDGTVWAWGANGFGQLGDGT 1192

Query: 556  STGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
            +  +  P R+ G  K   +  I  G YH   V S   V+ WG  A GQLG G  E++  P
Sbjct: 1193 TLSRTTPVRVAGLQK---VVAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRLLP 1249

Query: 615  TLVEALRDKQVKSVVCGSNFTAAIC 639
              VE L +  V SV  G + + A+ 
Sbjct: 1250 VRVEGLSN--VTSVAGGDHHSLALL 1272



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 97/343 (28%), Positives = 153/343 (44%), Gaps = 35/343 (10%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           ++  G+ HAV + K G +++WG  S G+LG G  +D + P  +  L    +  VA  +  
Sbjct: 254 AVTAGTYHAVALGKDGGVWTWGANSSGQLGDGAWSDRAVPARVPGLE--RVKAVASMDAS 311

Query: 360 TCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ-ISSICCGPWHTAA 417
           + A+  +G +  WG +G   LG  G          R   G++ GL+ ++++  G  H  A
Sbjct: 312 SLALLEAGSVLAWGANGSGQLGDSGTDD-------RATPGEVPGLRSVAAVVGGAQHALA 364

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
           +   G L+ +G G  G LGHG      VP  +  L ++ ++ A  G +H+ A        
Sbjct: 365 LRGDGTLWAWGGGLAGQLGHGGSERHVVPAPLLRLADVASMAA--GSFHSLAA------- 415

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
                L    +++WG    GQLG G    R   + V+    I     +  HS  +A+ A 
Sbjct: 416 -----LGDGTVWSWGRNTYGQLGDGTTAERHAAVRVEGLSGIRGVAASGHHS--LAVGAD 468

Query: 538 GQVFSMGSADYGQLGSPGST--GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
           G V++ G    GQLG  GST     P  + G      +  +A G  H   +     V+ W
Sbjct: 469 GTVWAWGRNAAGQLGD-GSTRDRARPVAVSGLTS---VVAVATGGSHTMALRGDGTVWAW 524

Query: 596 GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G  A GQLG G   ++ TP  V   R   V +V  G+ F+ A+
Sbjct: 525 GYNALGQLGDGTTVDRLTP--VRVARLDSVVAVAAGTYFSMAL 565



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 188/457 (41%), Gaps = 96/457 (21%)

Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEG------LGNGLLGGAVNGVEISSADRRDALLPKVL 290
           V+S + GS H     LGD  +W  G      LG+G           ++A+R  A+  + L
Sbjct: 402 VASMAAGSFHS-LAALGDGTVWSWGRNTYGQLGDG-----------TTAERHAAVRVEGL 449

Query: 291 ESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNI 350
                   + +A    H++ V   G +++WG  + G+LG G   D + P  +  L  +++
Sbjct: 450 SGI-----RGVAASGHHSLAVGADGTVWAWGRNAAGQLGDGSTRDRARPVAVSGL--TSV 502

Query: 351 HMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC 410
             VA G  HT A  L GD   W  G + LG LG  + +    P +V+ +++   + ++  
Sbjct: 503 VAVATGGSHTMA--LRGDGTVWAWGYNALGQLGDGTTVDRLTPVRVA-RLD--SVVAVAA 557

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
           G + + A+   G ++T+G+G  G +G G       P +V  L  +  V A     H  A+
Sbjct: 558 GTYFSMALRGDGTVWTWGEGFEGQVGDGGGVQRLFPVQVAGLTNVTRVAAGSA--HALAV 615

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
                            ++ WGD  EGQLG G    R  P  V+V        V+ G S 
Sbjct: 616 ------------RGDGTVWAWGDNGEGQLGDGTWSDRFRP--VQVPGLTGITAVSGGRSH 661

Query: 531 TIALTATGQVFSMGSADYGQLGS------------PGSTG---KFPTRI-------EGNI 568
           ++AL   G V + G   YGQLG             PG TG     P+ +       +G +
Sbjct: 662 SMALHGDGSVRAWGYNGYGQLGDGTFTSRVRPAVVPGLTGIQALHPSHLHVLALHADGTL 721

Query: 569 K----HRY----------------------IEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
           +    +R+                      ++ +A G  H  +V     V  WG+ A+GQ
Sbjct: 722 RGWGYNRFGQLGLGAAGWSSRPVQVRGLGRVDRLAVGRAHTLMVRPDGAVLAWGENASGQ 781

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
           LG G   ++  P LV  +    V+SV  G   + A+ 
Sbjct: 782 LGDGTTTHRAGPVLVRGV--PCVRSVASGVLHSLALA 816



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 144/307 (46%), Gaps = 47/307 (15%)

Query: 253  GDVFIWGEGLGNGLLGGAVNGVEIS-SADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
            G V+ WG   G G LG   +G  +S +   R A L KV+         +I  G  HA+ V
Sbjct: 1175 GTVWAWGAN-GFGQLG---DGTTLSRTTPVRVAGLQKVV---------AIGAGGYHALAV 1221

Query: 312  TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
               G +++WG  + G+LG G       P  ++ L  SN+  VA G+ H+ A+   G L  
Sbjct: 1222 RSDGSVWAWGYNAFGQLGDGTAESRLLPVRVEGL--SNVTSVAGGDHHSLALLADGSLGA 1279

Query: 372  WGDGIHNLGLLGQVSEISH----WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
            WG+  +  G LG  +  +     W+ + V G +E      +  G  HT A+   G ++T+
Sbjct: 1280 WGN--NAAGQLGDGTGTTRYSRVWV-KGVDGVVE------VRAGAAHTLALRGDGTVWTW 1330

Query: 428  GDGTFGALGHGDRSSTS--VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
            GD T   LG GD S+ +  VPR V  L  +  + A  G  H+ A+        G  G   
Sbjct: 1331 GDNTHSQLGAGDDSTRTRIVPRPVPGLSGVTAIGA--GARHSFAV--------GPKG--- 1377

Query: 486  KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
              ++ WG  + GQLG GD   R  PL VK   ++S   V+ G   ++A+   G V S GS
Sbjct: 1378 -TVWAWGRNSHGQLGLGDNANRAEPLRVKELAEVSV--VSGGADFSLAMQRDGTVSSWGS 1434

Query: 546  ADYGQLG 552
            + +G LG
Sbjct: 1435 SLHGALG 1441



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 156/377 (41%), Gaps = 55/377 (14%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           +A GS HA+ V   G +++WG+   G+LG G  +D   P  +  L G  I  V+ G  H+
Sbjct: 605 VAAGSAHALAVRGDGTVWAWGDNGEGQLGDGTWSDRFRPVQVPGLTG--ITAVSGGRSHS 662

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG--QMEGLQISSICCGPWHTAAI 418
            A+   G +  W  G +  G LG  +  S   P  V G   ++ L  S +     H  A+
Sbjct: 663 MALHGDGSVRAW--GYNGYGQLGDGTFTSRVRPAVVPGLTGIQALHPSHL-----HVLAL 715

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL--------KTVM----ASCGVW- 465
            + G L  +G   FG LG G    +S P +V  L  +         T+M     +   W 
Sbjct: 716 HADGTLRGWGYNRFGQLGLGAAGWSSRPVQVRGLGRVDRLAVGRAHTLMVRPDGAVLAWG 775

Query: 466 -------------HTAAIVEVAG----KTSGSNGLSSKKL------FTWGDGAEGQLGHG 502
                        H A  V V G    ++  S  L S  L      + WG    GQLG G
Sbjct: 776 ENASGQLGDGTTTHRAGPVLVRGVPCVRSVASGVLHSLALACDGSVWAWGANGRGQLGDG 835

Query: 503 DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT 562
               RV+P   +V        VA G   ++AL A G  ++ G+  +GQLG  GST     
Sbjct: 836 TTASRVIP--ARVDGLQGAVAVAAGGDASLALLADGTAWAWGANAHGQLGD-GSTSD--R 890

Query: 563 RIEGNIK-HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALR 621
            + G +K    I  +A G  H         ++ WG   +GQLG G      TP  V+ L 
Sbjct: 891 AVPGQLKLPSNIMSVALGETHGLAAGEDGALWAWGANGSGQLGEGSTTPSPTPVRVKGL- 949

Query: 622 DKQVKSVVCGSNFTAAI 638
            + V SV  G  F+ A+
Sbjct: 950 -EGVASVSAGRAFSLAV 965



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 179/416 (43%), Gaps = 49/416 (11%)

Query: 212 ASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEG----LGNGLL 267
           A+G L D ++R          L+S V+ ++ GS      G G V+ WG      LG+G  
Sbjct: 478 AAGQLGDGSTRDRARPVAVSGLTSVVAVATGGSHTMALRGDGTVWAWGYNALGQLGDG-- 535

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
                    ++ DR   +    L+S V     ++A G+  ++ +   G +++WGEG  G+
Sbjct: 536 ---------TTVDRLTPVRVARLDSVV-----AVAAGTYFSMALRGDGTVWTWGEGFEGQ 581

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           +G G      +P  +  L  +N+  VA G  H  AV   G ++ WGD  +  G LG  + 
Sbjct: 582 VGDGGGVQRLFPVQVAGL--TNVTRVAAGSAHALAVRGDGTVWAWGD--NGEGQLGDGT- 636

Query: 388 ISHWIPRKVSGQMEGLQ-ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVP 446
              W  R    Q+ GL  I+++  G  H+ A+   G +  +G   +G LG G  +S   P
Sbjct: 637 ---WSDRFRPVQVPGLTGITAVSGGRSHSMALHGDGSVRAWGYNGYGQLGDGTFTSRVRP 693

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP 506
             V  L  ++ +       H + +  +A    G+       L  WG    GQLG G A  
Sbjct: 694 AVVPGLTGIQAL-------HPSHLHVLALHADGT-------LRGWGYNRFGQLGLGAAGW 739

Query: 507 RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIE 565
              P+ V+    +   ++A G + T+ +   G V + G    GQLG   +T +  P  + 
Sbjct: 740 SSRPVQVRGLGRVD--RLAVGRAHTLMVRPDGAVLAWGENASGQLGDGTTTHRAGPVLVR 797

Query: 566 GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALR 621
           G      +  +A G  H   ++    V+ WG    GQLG G   ++  P  V+ L+
Sbjct: 798 GV---PCVRSVASGVLHSLALACDGSVWAWGANGRGQLGDGTTASRVIPARVDGLQ 850


>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
 gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
           domain containing protein 2 [Bos taurus]
          Length = 527

 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 148/311 (47%), Gaps = 19/311 (6%)

Query: 291 ESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNI 350
           E  +V  A      S   +  T   +IF  G    G LG G       P+ +D+L+G  I
Sbjct: 17  ELQLVRQACVFGSASNELLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI 76

Query: 351 HMVACGEF-HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
             ++ G   H    T  G+++TWG   ++   LG  +  +  +P  +S  +   Q+  + 
Sbjct: 77  ACLSYGSGPHIVLATTEGEVFTWGHNAYSQ--LGNGTTNAGLVPYHISTNLSNKQVIEVA 134

Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTA 468
           CG +H+  +TS G++F +G    G +G G  ++  +PR V    + K V+  +CG   + 
Sbjct: 135 CGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQMCSM 194

Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH 528
           A+V            ++ ++F WG    GQLG G +  +  P  V     I   +VACG+
Sbjct: 195 AVV------------NTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGY 242

Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVS 587
           + T+ LT  GQV++ G+  YGQLG+   + + +PT +    K R IE  AC S H +   
Sbjct: 243 AHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACHSAHTSAAK 301

Query: 588 SK-SEVYTWGK 597
           ++   VY WG+
Sbjct: 302 TQGGHVYMWGQ 312



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 110/221 (49%), Gaps = 19/221 (8%)

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           ++F  G    G LG GD  ST  PR +++L   K    S G      +    G+      
Sbjct: 42  EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGE------ 95

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS---FCKVACGHSITIALTATGQ 539
                +FTWG  A  QLG+G     +VP    +S ++S     +VACG   ++ LT+ G+
Sbjct: 96  -----VFTWGHNAYSQLGNGTTNAGLVPY--HISTNLSNKQVIEVACGSYHSLVLTSDGE 148

Query: 540 VFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
           VF+ G  + GQ+GS GST     P R+ G ++ + + +IACG      V +  EV+ WG 
Sbjct: 149 VFAWGYNNSGQVGS-GSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGY 207

Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             NGQLG G + N+ TP  V AL+  +V+ V CG   T  +
Sbjct: 208 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 248



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 130/272 (47%), Gaps = 25/272 (9%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGS----KHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           D +  + P+ L+S   L  + IAC S     H VL T +G++F+WG  +  +LG+G    
Sbjct: 58  DVQSTIEPRRLDS---LSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNA 114

Query: 336 VSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
              P  I   L+   +  VACG +H+  +T  G+++ WG   +N G +G  S  +  IPR
Sbjct: 115 GLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG--YNNSGQVGSGSTANQPIPR 172

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           +V+G ++   + +I CG   + A+ + G++F +G    G LG G   +   P  V  L+ 
Sbjct: 173 RVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQG 232

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
           ++    +CG  HT  + +              +++ WG  + GQLG G+   +  P  V 
Sbjct: 233 IRVQRVACGYAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSYPTPVV 280

Query: 515 VSDDISFCKVACGHS--ITIALTATGQVFSMG 544
           V  D    ++A  HS   + A T  G V+  G
Sbjct: 281 VEKD-RIIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 118/234 (50%), Gaps = 25/234 (10%)

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAA 469
           GP H    T+ G++FT+G   +  LG+G  ++  VP  + T L   + +  +CG +H+  
Sbjct: 84  GP-HIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLV 142

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVA 525
           +             S  ++F WG    GQ+G G       PR V  C++    ++   +A
Sbjct: 143 LT------------SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQSKVVVN---IA 187

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHI 583
           CG   ++A+  TG+VF  G    GQLG  GS+G  PT  R+   ++   ++ +ACG  H 
Sbjct: 188 CGQMCSMAVVNTGEVFVWGYNGNGQLG-LGSSGNQPTPCRVAA-LQGIRVQRVACGYAHT 245

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            V++ + +VY WG  + GQLG G+  N+  PT V   +D+ ++   C S  T+A
Sbjct: 246 LVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 299



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 19/180 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK----VLESTVVLDAQSIACGSKHA 308
           G+VF WG            N  ++ S    +  +P+     L+S VV++   IACG   +
Sbjct: 147 GEVFAWGYN----------NSGQVGSGSTANQPIPRRVTGCLQSKVVVN---IACGQMCS 193

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           + V   G++F WG    G+LG G   +   P  + AL G  +  VACG  HT  +T  G 
Sbjct: 194 MAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 253

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +Y W  G ++ G LG  ++ +   P  V  + + +   + C     +AA T  G ++ +G
Sbjct: 254 VYAW--GANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311


>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
          Length = 892

 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 129/246 (52%), Gaps = 20/246 (8%)

Query: 269 GAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKL 328
           G+V  V+++ A      LP++LE+   +    +ACGS+H V +TK+GQ+++WG+ S G+L
Sbjct: 94  GSVYRVDVTQA----LYLPRMLEAFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQL 149

Query: 329 GHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           G G +   +S P+ + +L+G  +  V+ G  H+ A+++SG ++ WG   ++ G LG    
Sbjct: 150 GLGKKGCSISSPQCVRSLSGMPLVQVSAGGDHSFALSVSGSVFGWGR--NDCGQLGLGDS 207

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPR 447
                P  V   +   + +SI CG  HTA +T  G +FTFG G FG LGH    +   PR
Sbjct: 208 QDRCTPTSVDS-LNLKKTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPR 266

Query: 448 EVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR 507
            V  L   K    +CG +HT  + E            + K++++G   + QLG  +    
Sbjct: 267 LVAELWGAKVTRIACGRYHTLVLQE------------NNKIYSFGCNDQNQLGRSNDSHP 314

Query: 508 VVPLCV 513
            VPL V
Sbjct: 315 SVPLPV 320



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 110/228 (48%), Gaps = 14/228 (6%)

Query: 391 WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS-STSVPREV 449
           ++PR +      + +S + CG  HT A+T  G+++T+G  + G LG G +  S S P+ V
Sbjct: 106 YLPRMLEAFCR-IPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCV 164

Query: 450 ETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV 509
            +L  +  V  S G  H+ A+       SGS       +F WG    GQLG GD++ R  
Sbjct: 165 RSLSGMPLVQVSAGGDHSFAL-----SVSGS-------VFGWGRNDCGQLGLGDSQDRCT 212

Query: 510 PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIK 569
           P  V   +      ++CG   T  LT  G VF+ GS  +GQLG   S  +   R+   + 
Sbjct: 213 PTSVDSLNLKKTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELW 272

Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLV 617
              +  IACG YH  V+   +++Y++G     QLG  ++ +   P  V
Sbjct: 273 GAKVTRIACGRYHTLVLQENNKIYSFGCNDQNQLGRSNDSHPSVPLPV 320



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+    G LG    G  ISS        P+ + S   +    ++ G  H+  ++
Sbjct: 136 GQVYTWGQN-SRGQLGLGKKGCSISS--------PQCVRSLSGMPLVQVSAGGDHSFALS 186

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +F WG    G+LG G   D   P  +D+LN      ++CG+ HT  +T  G ++T+
Sbjct: 187 VSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTSISCGKDHTAILTKHGTVFTF 246

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           G G    G LG  S  +   PR V+ ++ G +++ I CG +HT  +    K+++FG    
Sbjct: 247 GSG--QFGQLGHNSSRNELRPRLVA-ELWGAKVTRIACGRYHTLVLQENNKIYSFGCNDQ 303

Query: 433 GALGHGDRSSTSVPREV 449
             LG  + S  SVP  V
Sbjct: 304 NQLGRSNDSHPSVPLPV 320



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 93/196 (47%), Gaps = 15/196 (7%)

Query: 445 VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA 504
           +PR +E    +     +CG  HT A+ +              +++TWG  + GQLG G  
Sbjct: 107 LPRMLEAFCRIPVSQVACGSRHTVALTK------------EGQVYTWGQNSRGQLGLGKK 154

Query: 505 EPRVV-PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPT 562
              +  P CV+    +   +V+ G   + AL+ +G VF  G  D GQLG   S  +  PT
Sbjct: 155 GCSISSPQCVRSLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPT 214

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRD 622
            ++ ++  +    I+CG  H A+++    V+T+G G  GQLGH  + N+  P LV  L  
Sbjct: 215 SVD-SLNLKKTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWG 273

Query: 623 KQVKSVVCGSNFTAAI 638
            +V  + CG   T  +
Sbjct: 274 AKVTRIACGRYHTLVL 289



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 8/132 (6%)

Query: 520 SFCK-----VACGHSITIALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRY 572
           +FC+     VACG   T+ALT  GQV++ G    GQLG    G +   P  +  ++    
Sbjct: 113 AFCRIPVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCVR-SLSGMP 171

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
           +  ++ G  H   +S    V+ WG+   GQLG GD++++ TPT V++L  K+  S+ CG 
Sbjct: 172 LVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTSISCGK 231

Query: 633 NFTAAICLHKGV 644
           + TA +  H  V
Sbjct: 232 DHTAILTKHGTV 243


>gi|374296377|ref|YP_005046568.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium clariflavum DSM 19732]
 gi|359825871|gb|AEV68644.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium clariflavum DSM 19732]
          Length = 819

 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 203/455 (44%), Gaps = 84/455 (18%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+ + NG+LG       + +A   D+ +P V+  T   D + I+CG  H  ++ 
Sbjct: 379 GTVWTWGKNI-NGILG-------LGTA--LDSQIPSVVSGTG--DVEVISCGKTHMAIIK 426

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +++WG    G+LG+G    ++ P  I+ +  SNI  ++CG  H  A+  +  L+ W
Sbjct: 427 SDGTLWTWGYNIYGQLGNGNVDYITEPVTINGI--SNISKISCGGKHVLAIDENKTLWAW 484

Query: 373 GDG-----IHNLGLLGQVSEISHWIPRKVSGQ---------------------------- 399
           G+      I ++GL  +     + IP  V  +                            
Sbjct: 485 GNNDYLQLIDDVGLSAESGSNDYCIPFAVKSEKDVKDIVAAFNRTLVVYEDEEVWIYAAK 544

Query: 400 ---------------MEGLQ-ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
                          +EGL+ ++ +  G  H  A+   G +++ G+  +G LG G ++  
Sbjct: 545 NTVAGDEQSVYLPYKIEGLEGVTDVSVGKNHILALKDDGYVYSAGNSYWGQLGDGSQTHH 604

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHG 502
           +   E   L + K +           IV VA  +  S  L +   ++TWG    G+L HG
Sbjct: 605 NSYSETFNLTKAKGL---------TNIVAVAAGSEHSVALKNDGTVWTWGSNQFGELAHG 655

Query: 503 DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK--F 560
           +    + P+  +  ++I  C ++ G++  +AL   G V++ G   YGQLG+ GST K   
Sbjct: 656 NDTFSLEPMQAEGLENI--CAISAGNNYNLALKEDGTVWAWGDNTYGQLGN-GSTYKTNV 712

Query: 561 PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           P +++G      I  I  G      ++   +V+ WGK   GQLG G  +N+ TP  ++A 
Sbjct: 713 PVQVDG---LENIVKIIAGRDSSFAITKDGDVWAWGKNNCGQLGDGTTQNRLTPVKIDAF 769

Query: 621 RDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGC 655
             K  KS+V G +FT  + ++ G  I   S  SG 
Sbjct: 770 --KGCKSIVSGMDFT-MVLMNDGTVIGVGSNVSGV 801



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 156/342 (45%), Gaps = 34/342 (9%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS-YPKLIDALNGSNIHMVACGEFH 359
           +ACG  H + + K G +++WG  S G+LG G   ++   PK I+ L   ++  VA G  H
Sbjct: 114 VACGEYHTIALKKDGTVWTWGYNSYGQLGLGEAGEIERIPKKIEGL--EDVIKVAAGSRH 171

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           + A+   G ++ W  G +  G LG  S I    P +V G + G++   I  G + + A+ 
Sbjct: 172 SLALKKDGTVWAW--GYNYYGQLGDESNIRRNTPVQVKG-LTGVK--DIDAGDFFSVALR 226

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G ++ +G    G +G G   +++VP +   +  +  +  S G  H  A+ +       
Sbjct: 227 DDGTVWGWGYNYKGQIGCGTGINSNVPLQTVGVSNITQI--SAGDEHVLALDK------- 277

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
                 K ++ WG G +GQLG+G A    + +  K+S       V  G  ++ A+   G 
Sbjct: 278 -----DKNVWGWGAGDKGQLGNGTA-ASFLRIPEKLSSFTEVKSVKAGTMVSAAIKEDGT 331

Query: 540 VFSMGSADYGQLGSPGSTGKFPTR---IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           ++  G   YG +G+  +    P +   I G      I+ +    Y  A + +   V+TWG
Sbjct: 332 LWIWGDNTYGIMGNSRNINSSPVQRKDISG------IKAVELNQYCAAALKNDGTVWTWG 385

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           K  NG LG G   + Q P++V    D +V S  CG    A I
Sbjct: 386 KNINGILGLGTALDSQIPSVVSGTGDVEVIS--CGKTHMAII 425



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 157/356 (44%), Gaps = 35/356 (9%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
           +PK +E   + D   +A GS+H++ + K G +++WG    G+LG       + P  +  L
Sbjct: 152 IPKKIEG--LEDVIKVAAGSRHSLALKKDGTVWAWGYNYYGQLGDESNIRRNTPVQVKGL 209

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
            G  +  +  G+F + A  L  D   WG G +  G +G  + I+  +P +  G      I
Sbjct: 210 TG--VKDIDAGDFFSVA--LRDDGTVWGWGYNYKGQIGCGTGINSNVPLQTVGVS---NI 262

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSS-TSVPREVETLKELKTVMASCGV 464
           + I  G  H  A+     ++ +G G  G LG+G  +S   +P ++ +  E+K+V A    
Sbjct: 263 TQISAGDEHVLALDKDKNVWGWGAGDKGQLGNGTAASFLRIPEKLSSFTEVKSVKA---- 318

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK- 523
                +V  A K  G+       L+ WGD   G +G+     R +        DIS  K 
Sbjct: 319 ---GTMVSAAIKEDGT-------LWIWGDNTYGIMGN----SRNINSSPVQRKDISGIKA 364

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH 582
           V        AL   G V++ G    G LG       + P+ + G      +E I+CG  H
Sbjct: 365 VELNQYCAAALKNDGTVWTWGKNINGILGLGTALDSQIPSVVSGTGD---VEVISCGKTH 421

Query: 583 IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +A++ S   ++TWG    GQLG+G+ +    P  +  + +  +  + CG     AI
Sbjct: 422 MAIIKSDGTLWTWGYNIYGQLGNGNVDYITEPVTINGISN--ISKISCGGKHVLAI 475



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 59/123 (47%), Gaps = 13/123 (10%)

Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQ--LGSPGSTGKFPTRIEGNIKHRYIED--- 575
           F +VACG   TIAL   G V++ G   YGQ  LG  G   + P +IEG      +ED   
Sbjct: 111 FVQVACGEYHTIALKKDGTVWTWGYNSYGQLGLGEAGEIERIPKKIEG------LEDVIK 164

Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           +A GS H   +     V+ WG    GQLG   N  + TP  V+ L    VK +  G  F+
Sbjct: 165 VAAGSRHSLALKKDGTVWAWGYNYYGQLGDESNIRRNTPVQVKGLT--GVKDIDAGDFFS 222

Query: 636 AAI 638
            A+
Sbjct: 223 VAL 225



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 10/112 (8%)

Query: 555 GSTGKFPTR-IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD-NENKQ 612
           G   +FP + +EG ++      +ACG YH   +     V+TWG  + GQLG G+  E ++
Sbjct: 98  GMITEFPKKSMEGFVQ------VACGEYHTIALKKDGTVWTWGYNSYGQLGLGEAGEIER 151

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRR 664
            P  +E L D  V  V  GS  + A+     V    ++      ++ N RR 
Sbjct: 152 IPKKIEGLED--VIKVAAGSRHSLALKKDGTVWAWGYNYYGQLGDESNIRRN 201


>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
           domestica]
          Length = 1016

 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 164/346 (47%), Gaps = 31/346 (8%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           ACG +H++L+   G ++S G  S G+LG         P  I AL   +I  V+CG+ H+ 
Sbjct: 43  ACGERHSLLLLSDGTVWSCGNNSCGQLGRKRCQKHGRPAQIQALETQDIVSVSCGKEHSL 102

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           A+   G +++WG G      + +  ++S  IP+K+  ++   +I  + CG +H+ A+   
Sbjct: 103 AICKEGRVFSWGSGSDGQLGIREFKKLSS-IPKKID-ELSSFKIIQVSCGHYHSIALAQD 160

Query: 422 GKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           G++F++G    G LG G+   S + P+ V++L  +     + G  H+ A+   +G + G 
Sbjct: 161 GRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFAL-SFSGTSYG- 218

Query: 481 NGLSSKKLFTWGDGAEGQLGHG----DAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
                     WG    GQL        AE    P  +     +    ++CG   T  LT 
Sbjct: 219 ----------WGRNNAGQLALSGKKESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQ 268

Query: 537 TGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
            G+VF+ GS D GQLG    +G K P  ++  +       IACGSYH +A   +  +V +
Sbjct: 269 DGKVFTFGSNDSGQLGRQLISGMKGPQVVDSAVS---FSQIACGSYHTLAYSCTTGQVIS 325

Query: 595 WGKGAN----GQLGHGDN-ENKQTPTLVEA--LRDKQVKSVVCGSN 633
           +G G+     G L  GD  +N     L+ +    D QVK +  G+N
Sbjct: 326 FGCGSQRDPIGPLQPGDAVQNFNISNLISSNDFTDFQVKDIFAGAN 371



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 159/341 (46%), Gaps = 29/341 (8%)

Query: 318 FSWGEGSGGKLG----HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           + WG+ S G+LG       +A     +   +L    +   ACGE H+  + L  D   W 
Sbjct: 3   YCWGDNSSGQLGIPAVPRAKARAVRCRRGASLGNQTLLQAACGERHS--LLLLSDGTVWS 60

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
            G ++ G LG+     H  P ++   +E   I S+ CG  H+ AI   G++F++G G+ G
Sbjct: 61  CGNNSCGQLGRKRCQKHGRPAQIQA-LETQDIVSVSCGKEHSLAICKEGRVFSWGSGSDG 119

Query: 434 ALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            LG  + +  +S+P++++ L   K +  SCG +H+ A+ +              ++F+WG
Sbjct: 120 QLGIREFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALAQ------------DGRVFSWG 167

Query: 493 DGAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
               GQLG G+  P +  P  VK  D I   +VA G + + AL+ +G  +  G  + GQL
Sbjct: 168 KNNHGQLGLGENVPSQASPQWVKSLDGIPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQL 227

Query: 552 GSPGSTGKF-----PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
              G          P  I G +K   +  I+CG  H AV++   +V+T+G   +GQLG  
Sbjct: 228 ALSGKKESAEQISKPFSI-GELKRLQVTYISCGDEHTAVLTQDGKVFTFGSNDSGQLGRQ 286

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
                + P +V++        + CGS  T A     G  I+
Sbjct: 287 LISGMKGPQVVDSAVS--FSQIACGSYHTLAYSCTTGQVIS 325



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 135/272 (49%), Gaps = 38/272 (13%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVEADVSYPKLIDAL 345
           P  +++    D  S++CG +H++ + K+G++FSWG GS G+LG    +   S PK ID L
Sbjct: 80  PAQIQALETQDIVSVSCGKEHSLAICKEGRVFSWGSGSDGQLGIREFKKLSSIPKKIDEL 139

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ----ME 401
           +   I  V+CG +H+ A+   G +++WG   H  G LG    +   +P + S Q    ++
Sbjct: 140 SSFKIIQVSCGHYHSIALAQDGRVFSWGKNNH--GQLG----LGENVPSQASPQWVKSLD 193

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG-HGDRSS---TSVPREVETLKELKT 457
           G+ ++ +  G  H+ A++ +G  + +G    G L   G + S    S P  +  LK L+ 
Sbjct: 194 GIPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQLALSGKKESAEQISKPFSIGELKRLQV 253

Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH----GDAEPRVVPLCV 513
              SCG  HTA + +              K+FT+G    GQLG     G   P+V     
Sbjct: 254 TYISCGDEHTAVLTQ------------DGKVFTFGSNDSGQLGRQLISGMKGPQV----- 296

Query: 514 KVSDDISFCKVACGHSITIALT-ATGQVFSMG 544
            V   +SF ++ACG   T+A +  TGQV S G
Sbjct: 297 -VDSAVSFSQIACGSYHTLAYSCTTGQVISFG 327



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 115/221 (52%), Gaps = 17/221 (7%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G VF WG G  +G LG            ++ + +PK ++         ++CG  H++ + 
Sbjct: 108 GRVFSWGSG-SDGQLG--------IREFKKLSSIPKKIDELSSFKIIQVSCGHYHSIALA 158

Query: 313 KQGQIFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           + G++FSWG+ + G+LG G  V +  S P+ + +L+G  +  VA G  H+ A++ SG  Y
Sbjct: 159 QDGRVFSWGKNNHGQLGLGENVPSQAS-PQWVKSLDGIPLAQVAAGGAHSFALSFSGTSY 217

Query: 371 TWG-DGIHNLGLLGQVSEISHWIPRKVS-GQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
            WG +    L L G+  E +  I +  S G+++ LQ++ I CG  HTA +T  GK+FTFG
Sbjct: 218 GWGRNNAGQLALSGK-KESAEQISKPFSIGELKRLQVTYISCGDEHTAVLTQDGKVFTFG 276

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA 469
               G LG    S    P+ V++      +  +CG +HT A
Sbjct: 277 SNDSGQLGRQLISGMKGPQVVDSAVSFSQI--ACGSYHTLA 315


>gi|66818759|ref|XP_643039.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
 gi|60471137|gb|EAL69105.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
          Length = 646

 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 156/335 (46%), Gaps = 45/335 (13%)

Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN---IHMVACGEFHTCAVTLSG-DLY 370
           G +++WG    G+ G      +  P  I      N   I  +ACG+ H+ A+      +Y
Sbjct: 97  GLVYAWGYNYFGQCGDKTNQTIKVPTSILFPTIDNKIIIKQIACGDSHSLAIAEQPYGVY 156

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ------ISSICCGPWHTAAITSAGKL 424
           +WG  ++  G LG   +++   P  +S    G         S + CG  H+  +++ G+L
Sbjct: 157 SWG--VNRWGQLGHGDQLNRNQPTLLSNIGSGSGSGNSISFSMVACGSQHSMIVSNYGEL 214

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           +TFG GT G LGHGD      P  V +L     V  + GV H++ +         SNG  
Sbjct: 215 YTFGCGTTGRLGHGDEQPKFKPTPVSSLVGKSIVSVAAGVMHSSCV--------DSNG-- 264

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD----------------DISFCKVACGH 528
             K+++WG    GQLG+G  + + +P   K  +                 ++F KV CG 
Sbjct: 265 --KIYSWGWNRYGQLGNGSVKSQTLPTPPKFQNPKLSDIQQQQQQHHLMKLNFIKVVCGK 322

Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVS 587
           + T+AL+++G+V   G    GQLG+     + +P +IE N    ++ DIA G YH   ++
Sbjct: 323 NHTLALSSSGEVVGFGFNACGQLGNGNHMDQLYPVKIEFN---EHVIDIASGYYHSLCLT 379

Query: 588 SKSEVYTWGKGANGQLGHGDNENKQT-PTLVEALR 621
              E Y+WG  ++G LG G+    QT P L+  + 
Sbjct: 380 DNGEAYSWGYMSDGSLGLGEVYTHQTKPKLIPLVH 414



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 162/346 (46%), Gaps = 61/346 (17%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           +ACGS+H+++V+  G+++++G G+ G+LGHG E     P  + +L G +I  VA G  H+
Sbjct: 198 VACGSQHSMIVSNYGELYTFGCGTTGRLGHGDEQPKFKPTPVSSLVGKSIVSVAAGVMHS 257

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ---------------MEGLQI 405
             V  +G +Y+W  G +  G LG  S  S  +P     Q               +  L  
Sbjct: 258 SCVDSNGKIYSW--GWNRYGQLGNGSVKSQTLPTPPKFQNPKLSDIQQQQQQHHLMKLNF 315

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
             + CG  HT A++S+G++  FG    G LG+G+      P ++E  + +  + +  G +
Sbjct: 316 IKVVCGKNHTLALSSSGEVVGFGFNACGQLGNGNHMDQLYPVKIEFNEHVIDIAS--GYY 373

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA-----EPRVVPLCVKVSDDIS 520
           H+  + +        NG    + ++WG  ++G LG G+      +P+++PL         
Sbjct: 374 HSLCLTD--------NG----EAYSWGYMSDGSLGLGEVYTHQTKPKLIPL--------- 412

Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY-----IED 575
              V   H  T +  A  +++  G  D        +T +   + +  +  +Y     ++ 
Sbjct: 413 ---VHIRHCFTDSNDAFNEIY--GRQD------ENTTQETIDQHKLYLSKKYSVGDTVDM 461

Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALR 621
           I+ G+++ A+++S  +++ +G G   + G+    ++  P +VE  +
Sbjct: 462 ISAGAWNSAIITSSGKLFCFGFGDTYRNGNQSEFDQDMPIIVEPTK 507



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 96/244 (39%), Gaps = 37/244 (15%)

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREV---ETLKELKTVMASCGVWHTAAIVEVAGKT 477
            G ++ +G   FG  G     +  VP  +       ++     +CG  H+ AI E     
Sbjct: 96  GGLVYAWGYNYFGQCGDKTNQTIKVPTSILFPTIDNKIIIKQIACGDSHSLAIAE----- 150

Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS-------FCKVACGHSI 530
                     +++WG    GQLGHGD   R  P  +      S       F  VACG   
Sbjct: 151 ------QPYGVYSWGVNRWGQLGHGDQLNRNQPTLLSNIGSGSGSGNSISFSMVACGSQH 204

Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
           ++ ++  G++++ G    G+LG      KF      ++  + I  +A G  H + V S  
Sbjct: 205 SMIVSNYGELYTFGCGTTGRLGHGDEQPKFKPTPVSSLVGKSIVSVAAGVMHSSCVDSNG 264

Query: 591 EVYTWGKGANGQLGHGDNENKQTPT----------------LVEALRDKQVKSVVCGSNF 634
           ++Y+WG    GQLG+G  +++  PT                    L       VVCG N 
Sbjct: 265 KIYSWGWNRYGQLGNGSVKSQTLPTPPKFQNPKLSDIQQQQQQHHLMKLNFIKVVCGKNH 324

Query: 635 TAAI 638
           T A+
Sbjct: 325 TLAL 328



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 21/180 (11%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG---- 331
           +   D +    P  + S V     S+A G  H+  V   G+I+SWG    G+LG+G    
Sbjct: 225 LGHGDEQPKFKPTPVSSLVGKSIVSVAAGVMHSSCVDSNGKIYSWGWNRYGQLGNGSVKS 284

Query: 332 ----VEADVSYPKLIDALNGSNIHM--------VACGEFHTCAVTLSGDLYTWGDGIHNL 379
                      PKL D       H         V CG+ HT A++ SG++   G G +  
Sbjct: 285 QTLPTPPKFQNPKLSDIQQQQQQHHLMKLNFIKVVCGKNHTLALSSSGEVV--GFGFNAC 342

Query: 380 GLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGD 439
           G LG  + +    P K+      + I+S   G +H+  +T  G+ +++G  + G+LG G+
Sbjct: 343 GQLGNGNHMDQLYPVKIEFNEHVIDIAS---GYYHSLCLTDNGEAYSWGYMSDGSLGLGE 399



 Score = 56.6 bits (135), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 104/269 (38%), Gaps = 54/269 (20%)

Query: 232 SLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADR------RDAL 285
           S+ S  +     SC    D  G ++ WG      L  G+V    + +  +       D  
Sbjct: 246 SIVSVAAGVMHSSC---VDSNGKIYSWGWNRYGQLGNGSVKSQTLPTPPKFQNPKLSDIQ 302

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
             +     + L+   + CG  H + ++  G++  +G  + G+LG+G   D  YP  I+  
Sbjct: 303 QQQQQHHLMKLNFIKVVCGKNHTLALSSSGEVVGFGFNACGQLGNGNHMDQLYPVKIEF- 361

Query: 346 NGSNIHMV--ACGEFHTCAVTLSGDLYTWG---DGIHNLGLLGQVSEISHWIP------- 393
              N H++  A G +H+  +T +G+ Y+WG   DG   LG +         IP       
Sbjct: 362 ---NEHVIDIASGYYHSLCLTDNGEAYSWGYMSDGSLGLGEVYTHQTKPKLIPLVHIRHC 418

Query: 394 --------RKVSGQME---------------------GLQISSICCGPWHTAAITSAGKL 424
                    ++ G+ +                     G  +  I  G W++A ITS+GKL
Sbjct: 419 FTDSNDAFNEIYGRQDENTTQETIDQHKLYLSKKYSVGDTVDMISAGAWNSAIITSSGKL 478

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLK 453
           F FG G     G+       +P  VE  K
Sbjct: 479 FCFGFGDTYRNGNQSEFDQDMPIIVEPTK 507


>gi|110825982|ref|NP_057407.2| E3 ISG15--protein ligase HERC5 [Homo sapiens]
 gi|296434523|sp|Q9UII4.2|HERC5_HUMAN RecName: Full=E3 ISG15--protein ligase HERC5; AltName:
           Full=Cyclin-E-binding protein 1; AltName: Full=HECT
           domain and RCC1-like domain-containing protein 5
 gi|119626425|gb|EAX06020.1| hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 118/217 (54%), Gaps = 15/217 (6%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFH 359
           I CG  H++ ++K G++F+WG+   G+LG G +    + P++++ L G  +  ++ GE H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           + A+++SG++Y+WG   +  G LG     S   P  + G ++  ++  + CG  H+A +T
Sbjct: 203 SMALSMSGNIYSWGK--NECGQLGLGHTESKDDPSLIEG-LDNQKVEFVACGGSHSALLT 259

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G LFTFG G  G LGH    +   P  V  L   +    +CG WHT A V   G    
Sbjct: 260 QDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLG---- 315

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
                  K+F++G G +GQLG+G    +++PL VKVS
Sbjct: 316 -------KVFSFGSGKDGQLGNGGTRDQLMPLPVKVS 345



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 157/365 (43%), Gaps = 34/365 (9%)

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
           GGA   V    A    A  PK ++    +   S+  G++H ++++  G+ F +   S   
Sbjct: 69  GGAGVQVHQLLAGSGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKH 128

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           L           +    L    I  + CG++H+ A++  G+L+ WG  +H  G LG   +
Sbjct: 129 L-----------RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRK 175

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPR 447
                  ++   + G+ ++ I  G  H+ A++ +G ++++G    G LG G   S   P 
Sbjct: 176 FPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPS 235

Query: 448 EVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR 507
            +E L   K    +CG  H+A + +        +GL    LFT+G G  GQLGH   +  
Sbjct: 236 LIEGLDNQKVEFVACGGSHSALLTQ--------DGL----LFTFGAGKHGQLGHNSTQNE 283

Query: 508 VVPLCVKVSDDISFCKVACGHSITIALTA-TGQVFSMGSADYGQLGSPGSTGK---FPTR 563
           + P  V         ++ACG   T+A  +  G+VFS GS   GQLG+ G+  +    P +
Sbjct: 284 LRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVK 343

Query: 564 IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDK 623
           +  + + + +E        I +      +  W K  N  +    N  +  PTL E    +
Sbjct: 344 VSSSEELK-LESHTSEKELIMIAGGNQSILLWIKKENSYV----NLKRTIPTLNEGTVKR 398

Query: 624 QVKSV 628
            +  V
Sbjct: 399 WIADV 403



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 13/200 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++F WG+ L +G LG    G +  S        P+++E    +    I+ G  H++ ++
Sbjct: 157 GELFAWGQNL-HGQLGV---GRKFPSTTT-----PQIVEHLAGVPLAQISAGEAHSMALS 207

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G I+SWG+   G+LG G       P LI+ L+   +  VACG  H+  +T  G L+T+
Sbjct: 208 MSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTF 267

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G H  G LG  S  +   P  V+ ++ G +++ I CG WHT A ++  GK+F+FG G 
Sbjct: 268 GAGKH--GQLGHNSTQNELRPCLVA-ELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324

Query: 432 FGALGHGDRSSTSVPREVET 451
            G LG+G      +P  V+ 
Sbjct: 325 DGQLGNGGTRDQLMPLPVKV 344



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 116/239 (48%), Gaps = 26/239 (10%)

Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
           + ++I S+  G  H   ++S GK F +           D  S    R    L+E K +  
Sbjct: 95  KNMKIHSVDQGAEHMLILSSDGKPFEY-----------DNYSMKHLRFESILQEKKIIQI 143

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP-RVVPLCVKVSDDI 519
           +CG +H+ A+         S G    +LF WG    GQLG G   P    P  V+    +
Sbjct: 144 TCGDYHSLAL---------SKG---GELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV 191

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIAC 578
              +++ G + ++AL+ +G ++S G  + GQLG   +  K  P+ IEG + ++ +E +AC
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEG-LDNQKVEFVAC 250

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           G  H A+++    ++T+G G +GQLGH   +N+  P LV  L   +V  + CG   T A
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLA 309



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 7/120 (5%)

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY----IEDIAC 578
           ++ CG   ++AL+  G++F+ G   +GQLG      KFP+     I        +  I+ 
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGV---GRKFPSTTTPQIVEHLAGVPLAQISA 198

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G  H   +S    +Y+WGK   GQLG G  E+K  P+L+E L +++V+ V CG + +A +
Sbjct: 199 GEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALL 258


>gi|363741143|ref|XP_415822.3| PREDICTED: serine/threonine-protein kinase Nek8 [Gallus gallus]
          Length = 698

 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 149/341 (43%), Gaps = 45/341 (13%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW-GDG 375
           I++WG G            ++ P  +  LN + +  V+ G      VT SG L  W    
Sbjct: 320 IYTWGSG------------ITTPLRLPMLN-TEVVQVSAGRTQKAGVTKSGRLIMWEAPP 366

Query: 376 IHNLG---LLGQVSEIS-HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           +   G   L G   ++   ++ R + GQ  G+ I  + CG   TA +T  G + TFG G+
Sbjct: 367 MGTAGGPSLPGATEQLQPQFVSRFLEGQ-SGVTIKHVSCGDLFTACLTDRGIIMTFGSGS 425

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGHG+ +  S P+ VE L   + V  +CG  H  A+         SN    +++F W
Sbjct: 426 NGCLGHGNFTDVSQPKIVEALLGYEMVQVACGASHVLAV---------SN---EREVFAW 473

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           G G  G+LG G  E    P  V V  +    +V CG   ++ LT   Q+ + GS    +L
Sbjct: 474 GRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGIDSSMVLTVNNQILACGSNRCNKL 533

Query: 552 GSPGSTGKFPTRIEGNIKHRYI-----------EDIAC---GSYHIAVVSSKSEVYTWGK 597
           G    +       E  ++   +           E + C   G+ H A V++  + YT+G 
Sbjct: 534 GLDRISSAEEPSPEDQVEEATVFTCAQSAPLNQEPVVCADIGTAHSAAVTASGQCYTFGS 593

Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             +GQLG     N + P LV  LR  +V  V CG  FT AI
Sbjct: 594 NQHGQLGTNSCRNSRVPHLVVGLRAMKVTVVACGDAFTVAI 634



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 133/306 (43%), Gaps = 30/306 (9%)

Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
           + LE    +  + ++CG      +T +G I ++G GS G LGHG   DVS PK+++AL G
Sbjct: 389 RFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNGCLGHGNFTDVSQPKIVEALLG 448

Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISS 407
             +  VACG  H  AV+   +++ WG G  + G LG  +   H  P++V+   E  +   
Sbjct: 449 YEMVQVACGASHVLAVSNEREVFAWGRG--DNGRLGLGTLECHNSPQQVAVPPEH-EAQR 505

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPR---EVE-----------TLK 453
           + CG   +  +T   ++   G      LG    SS   P    +VE            L 
Sbjct: 506 VICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCAQSAPLN 565

Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
           +   V A  G  H+AA+             +S + +T+G    GQLG        VP  V
Sbjct: 566 QEPVVCADIGTAHSAAVT------------ASGQCYTFGSNQHGQLGTNSCRNSRVPHLV 613

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY- 572
                +    VACG + T+A+ A G+V + G    G+LG        P  ++    H Y 
Sbjct: 614 VGLRAMKVTVVACGDAFTVAIGADGEVCTWGKGARGRLGRKDEETGMPRPVQLEETHPYV 673

Query: 573 IEDIAC 578
           +  +AC
Sbjct: 674 VTSVAC 679



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 129/294 (43%), Gaps = 38/294 (12%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +  +G G  NG LG           +  D   PK++E+ +  +   +ACG+ H + V+
Sbjct: 416 GIIMTFGSG-SNGCLG---------HGNFTDVSQPKIVEALLGYEMVQVACGASHVLAVS 465

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
            + ++F+WG G  G+LG G     + P+ +          V CG   +  +T++  +   
Sbjct: 466 NEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEHEAQRVICGIDSSMVLTVNNQILAC 525

Query: 373 GDGIHNLGLLGQVSEISHWIPRK--------VSGQMEGLQISSICC---GPWHTAAITSA 421
           G    N   L ++S      P             Q   L    + C   G  H+AA+T++
Sbjct: 526 GSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCAQSAPLNQEPVVCADIGTAHSAAVTAS 585

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+ +TFG    G LG     ++ VP  V  L+ +K  + +CG   T AI        G++
Sbjct: 586 GQCYTFGSNQHGQLGTNSCRNSRVPHLVVGLRAMKVTVVACGDAFTVAI--------GAD 637

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAE---PRVVPLCVKVSDDISFCKVACGHSITI 532
           G    ++ TWG GA G+LG  D E   PR  P+ ++ +       VAC H  T+
Sbjct: 638 G----EVCTWGKGARGRLGRKDEETGMPR--PVQLEETHPYVVTSVACCHGNTL 685


>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
          Length = 527

 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 147/311 (47%), Gaps = 19/311 (6%)

Query: 291 ESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNI 350
           E  +V  A      S   +  T   +IF  G    G LG G       P+ +D+L G  I
Sbjct: 17  ELQLVRQACVFGSASNELLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLTGKKI 76

Query: 351 HMVACGEF-HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
             ++ G   H    T  G+++TWG   ++   LG  +  +  +P  +S  +   Q+  + 
Sbjct: 77  ACLSYGSGPHIVLATTEGEVFTWGHNAYSQ--LGNGTTNAGLVPYHISTNLSNKQVIEVA 134

Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTA 468
           CG +H+  +TS G++F +G    G +G G  ++  +PR V    + K V+  +CG   + 
Sbjct: 135 CGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSM 194

Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH 528
           A+V            ++ ++F WG    GQLG G +  +  P  V     I   +VACG+
Sbjct: 195 AVV------------NTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGY 242

Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVS 587
           + T+ LT  GQV++ G+  YGQLG+   + + +PT +    K R IE  AC S H +   
Sbjct: 243 AHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACHSAHTSAAK 301

Query: 588 SK-SEVYTWGK 597
           ++   VY WG+
Sbjct: 302 TQGGHVYMWGQ 312



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 111/221 (50%), Gaps = 19/221 (8%)

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           ++F  G    G LG GD  ST  PR +++L   K    S G      +    G+      
Sbjct: 42  EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLTGKKIACLSYGSGPHIVLATTEGE------ 95

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS---FCKVACGHSITIALTATGQ 539
                +FTWG  A  QLG+G     +VP    +S ++S     +VACG   ++ LT+ G+
Sbjct: 96  -----VFTWGHNAYSQLGNGTTNAGLVPY--HISTNLSNKQVIEVACGSYHSLVLTSDGE 148

Query: 540 VFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
           VF+ G  + GQ+GS GST     P R+ G ++++ + +IACG      V +  EV+ WG 
Sbjct: 149 VFAWGYNNSGQVGS-GSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGY 207

Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             NGQLG G + N+ TP  V AL+  +V+ V CG   T  +
Sbjct: 208 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 248



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 130/272 (47%), Gaps = 25/272 (9%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGS----KHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           D +  + P+ L+S   L  + IAC S     H VL T +G++F+WG  +  +LG+G    
Sbjct: 58  DVQSTIEPRRLDS---LTGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNA 114

Query: 336 VSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
              P  I   L+   +  VACG +H+  +T  G+++ WG   +N G +G  S  +  IPR
Sbjct: 115 GLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG--YNNSGQVGSGSTANQPIPR 172

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           +V+G ++   + +I CG   + A+ + G++F +G    G LG G   +   P  V  L+ 
Sbjct: 173 RVTGCLQNKVVVNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQG 232

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
           ++    +CG  HT  + +              +++ WG  + GQLG G+   +  P  V 
Sbjct: 233 IRVQRVACGYAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSYPTPVV 280

Query: 515 VSDDISFCKVACGHS--ITIALTATGQVFSMG 544
           V  D    ++A  HS   + A T  G V+  G
Sbjct: 281 VEKD-RIIEIAACHSAHTSAAKTQGGHVYMWG 311



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/234 (30%), Positives = 117/234 (50%), Gaps = 25/234 (10%)

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAA 469
           GP H    T+ G++FT+G   +  LG+G  ++  VP  + T L   + +  +CG +H+  
Sbjct: 84  GP-HIVLATTEGEVFTWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLV 142

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVA 525
           +             S  ++F WG    GQ+G G       PR V  C++   +     +A
Sbjct: 143 LT------------SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQ---NKVVVNIA 187

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHI 583
           CG   ++A+  TG+VF  G    GQLG  GS+G  PT  R+   ++   ++ +ACG  H 
Sbjct: 188 CGQMCSMAVVNTGEVFVWGYNGNGQLG-LGSSGNQPTPCRVAA-LQGIRVQRVACGYAHT 245

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            V++ + +VY WG  + GQLG G+  N+  PT V   +D+ ++   C S  T+A
Sbjct: 246 LVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 299



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 19/180 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK----VLESTVVLDAQSIACGSKHA 308
           G+VF WG            N  ++ S    +  +P+     L++ VV++   IACG   +
Sbjct: 147 GEVFAWGYN----------NSGQVGSGSTANQPIPRRVTGCLQNKVVVN---IACGQMCS 193

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           + V   G++F WG    G+LG G   +   P  + AL G  +  VACG  HT  +T  G 
Sbjct: 194 MAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 253

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +Y W  G ++ G LG  ++ +   P  V  + + +   + C     +AA T  G ++ +G
Sbjct: 254 VYAW--GANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 311


>gi|170581639|ref|XP_001895769.1| hypothetical protein [Brugia malayi]
 gi|158597158|gb|EDP35375.1| conserved hypothetical protein [Brugia malayi]
          Length = 916

 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 179/351 (50%), Gaps = 48/351 (13%)

Query: 316 QIFSWGEGSGGKLGH---GVEAD---VSYPKLI----DALNGSNIHMVACGEFHTCAVTL 365
           Q++ +G    G+LG     VE+D   +  P+L+       NG  +  +A GE HT  + L
Sbjct: 5   QLYVFGCAGDGQLGFRPDSVESDSQMMIVPRLVYGAPTGQNGVTVKSIASGERHT--LFL 62

Query: 366 SGDLYTWGDGIHNLGLLGQ--VSEISHWI-PRKVSGQMEGLQISSICCGPWHTAAITSAG 422
           S D   W  G +  G LG+  V E S+ I P  +S  +  +QIS+   G  H+ A++  G
Sbjct: 63  SDDGKVWSCGSNYNGELGRGGVREGSYTIYPVHISSTVSIIQISA---GRSHSMAVSDDG 119

Query: 423 KLFTFGDGTFGALGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           +LF +G  + G L   GD  ++  P+ V +L E  TV  +CG  HT ++          N
Sbjct: 120 RLFAWGSNSHGQLAMSGDILASDTPKRVPSLPE--TVQVACGASHTVSL----------N 167

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRV---VPLCVKVSDDI------SFCKVACGHSITI 532
           G    ++F WG  ++G++ H  AE  +   +P+   V +        S   V CG S +I
Sbjct: 168 G--GGRVFIWGQQSDGRIRHSPAEVEIFISIPIVQNVVNPCAVPNINSVVAVECGDSHSI 225

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEG--NIKHRYIEDIACGSYHIAVVSSKS 590
           ALT  G+VFS GS  +GQLG  G   +    + G   +   ++  IACG  H  VV++  
Sbjct: 226 ALTHEGRVFSCGSDSFGQLGC-GQPNRSQNCMRGITEMLGSHVTRIACGRCHTIVVAN-G 283

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLH 641
           +++T+G  +NGQLGHG+  N+ TP +++++ +  V SV  G + +  + +H
Sbjct: 284 KMHTFGLNSNGQLGHGNTRNQITPRVIDSVEN--VASVFAGWDQSFCLQIH 332



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 154/315 (48%), Gaps = 31/315 (9%)

Query: 263 GNGLLGGAVNGVEISSADRRDALLPKVLESTVV----LDAQSIACGSKHAVLVTKQGQIF 318
           G+G LG   + VE   +D +  ++P+++         +  +SIA G +H + ++  G+++
Sbjct: 13  GDGQLGFRPDSVE---SDSQMMIVPRLVYGAPTGQNGVTVKSIASGERHTLFLSDDGKVW 69

Query: 319 SWGEGSGGKLGHGVEADVSYPKLIDALNGS-NIHMVACGEFHTCAVTLSGDLYTWGDGIH 377
           S G    G+LG G   + SY      ++ + +I  ++ G  H+ AV+  G L+ WG   H
Sbjct: 70  SCGSNYNGELGRGGVREGSYTIYPVHISSTVSIIQISAGRSHSMAVSDDGRLFAWGSNSH 129

Query: 378 -NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
             L + G +  ++   P++V    E +Q++   CG  HT ++   G++F +G  + G + 
Sbjct: 130 GQLAMSGDI--LASDTPKRVPSLPETVQVA---CGASHTVSLNGGGRVFIWGQQSDGRIR 184

Query: 437 HGDRSSTSVPREVE---TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
           H        P EVE   ++  ++ V+  C V +  ++V V    S S  L+ + ++F+ G
Sbjct: 185 HS-------PAEVEIFISIPIVQNVVNPCAVPNINSVVAVECGDSHSIALTHEGRVFSCG 237

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDI---SFCKVACGHSITIALTATGQVFSMGSADYG 549
             + GQLG G  +P     C++   ++      ++ACG   TI + A G++ + G    G
Sbjct: 238 SDSFGQLGCG--QPNRSQNCMRGITEMLGSHVTRIACGRCHTI-VVANGKMHTFGLNSNG 294

Query: 550 QLGSPGSTGKFPTRI 564
           QLG   +  +   R+
Sbjct: 295 QLGHGNTRNQITPRV 309



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 114/219 (52%), Gaps = 27/219 (12%)

Query: 253 GDVFIWGEGLGNGLLGGAVNG-VEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           G +F WG    +G L  A++G +  S   +R   LP+ ++         +ACG+ H V +
Sbjct: 119 GRLFAWGSN-SHGQL--AMSGDILASDTPKRVPSLPETVQ---------VACGASHTVSL 166

Query: 312 TKQGQIFSWGEGSGGKLGHG---VEADVSYPKLIDALNG------SNIHMVACGEFHTCA 362
              G++F WG+ S G++ H    VE  +S P + + +N       +++  V CG+ H+ A
Sbjct: 167 NGGGRVFIWGQQSDGRIRHSPAEVEIFISIPIVQNVVNPCAVPNINSVVAVECGDSHSIA 226

Query: 363 VTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           +T  G +++ G D    LG  GQ +  S    R ++ +M G  ++ I CG  HT  + + 
Sbjct: 227 LTHEGRVFSCGSDSFGQLG-CGQPNR-SQNCMRGIT-EMLGSHVTRIACGRCHTIVVAN- 282

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
           GK+ TFG  + G LGHG+  +   PR +++++ + +V A
Sbjct: 283 GKMHTFGLNSNGQLGHGNTRNQITPRVIDSVENVASVFA 321


>gi|37695550|gb|AAR00320.1| HECT E3 ubiquitin ligase [Homo sapiens]
          Length = 1024

 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 118/217 (54%), Gaps = 15/217 (6%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFH 359
           I CG  H++ ++K G++F+WG+   G+LG G +    + P++++ L G  +  ++ GE H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           + A+++SG++Y+WG   +  G LG     S   P  + G ++  ++  + CG  H+A +T
Sbjct: 203 STALSMSGNIYSWGK--NECGQLGLGHTESKDDPSLIEG-LDNQKVEFVACGGSHSALLT 259

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G LFTFG G  G LGH    +   P  V  L   +    +CG WHT A V   G    
Sbjct: 260 QDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLG---- 315

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
                  K+F++G G +GQLG+G    +++PL VKVS
Sbjct: 316 -------KVFSFGSGKDGQLGNGGTRDQLMPLPVKVS 345



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 157/365 (43%), Gaps = 34/365 (9%)

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
           GGA   V    A    A  PK ++    +   S+  G++H ++++  G+ F +   S   
Sbjct: 69  GGAGVQVHQLLAGSGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKH 128

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           L           +    L    I  + CG++H+ A++  G+L+ WG  +H  G LG   +
Sbjct: 129 L-----------RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRK 175

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPR 447
                  ++   + G+ ++ I  G  H+ A++ +G ++++G    G LG G   S   P 
Sbjct: 176 FPSTTTPQIVEHLAGVPLAQISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPS 235

Query: 448 EVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR 507
            +E L   K    +CG  H+A + +        +GL    LFT+G G  GQLGH   +  
Sbjct: 236 LIEGLDNQKVEFVACGGSHSALLTQ--------DGL----LFTFGAGKHGQLGHNSTQNE 283

Query: 508 VVPLCVKVSDDISFCKVACGHSITIALTA-TGQVFSMGSADYGQLGSPGSTGK---FPTR 563
           + P  V         ++ACG   T+A  +  G+VFS GS   GQLG+ G+  +    P +
Sbjct: 284 LRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVK 343

Query: 564 IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDK 623
           +  + + + +E        I +      +  W K  N  +    N  +  PTL E    +
Sbjct: 344 VSSSEELK-LESHTSEKELIMIAGGNQSILLWIKKENSYV----NLKRTIPTLNEGTVKR 398

Query: 624 QVKSV 628
            +  V
Sbjct: 399 WIADV 403



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 103/200 (51%), Gaps = 13/200 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++F WG+ L +G LG    G +  S        P+++E    +    I+ G  H+  ++
Sbjct: 157 GELFAWGQNL-HGQLGV---GRKFPSTTT-----PQIVEHLAGVPLAQISAGEAHSTALS 207

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G I+SWG+   G+LG G       P LI+ L+   +  VACG  H+  +T  G L+T+
Sbjct: 208 MSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTF 267

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G H  G LG  S  +   P  V+ ++ G +++ I CG WHT A ++  GK+F+FG G 
Sbjct: 268 GAGKH--GQLGHNSTQNELRPCLVA-ELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324

Query: 432 FGALGHGDRSSTSVPREVET 451
            G LG+G      +P  V+ 
Sbjct: 325 DGQLGNGGTRDQLMPLPVKV 344



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 115/239 (48%), Gaps = 26/239 (10%)

Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
           + ++I S+  G  H   ++S GK F +           D  S    R    L+E K +  
Sbjct: 95  KNMKIHSVDQGAEHMLILSSDGKPFEY-----------DNYSMKHLRFESILQEKKIIQI 143

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP-RVVPLCVKVSDDI 519
           +CG +H+ A+         S G    +LF WG    GQLG G   P    P  V+    +
Sbjct: 144 TCGDYHSLAL---------SKG---GELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV 191

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIAC 578
              +++ G + + AL+ +G ++S G  + GQLG   +  K  P+ IEG + ++ +E +AC
Sbjct: 192 PLAQISAGEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEG-LDNQKVEFVAC 250

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           G  H A+++    ++T+G G +GQLGH   +N+  P LV  L   +V  + CG   T A
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLA 309



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 7/120 (5%)

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY----IEDIAC 578
           ++ CG   ++AL+  G++F+ G   +GQLG      KFP+     I        +  I+ 
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGV---GRKFPSTTTPQIVEHLAGVPLAQISA 198

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G  H   +S    +Y+WGK   GQLG G  E+K  P+L+E L +++V+ V CG + +A +
Sbjct: 199 GEAHSTALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALL 258


>gi|6630609|dbj|BAA88519.1| cyclin-E binding protein 1 [Homo sapiens]
          Length = 1024

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 118/217 (54%), Gaps = 15/217 (6%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFH 359
           I CG  H++ ++K G++F+WG+   G+LG G +    + P++++ L G  +  ++ GE H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           + A+++SG++Y+WG   +  G LG     S   P  + G ++  ++  + CG  H+A +T
Sbjct: 203 SMALSMSGNIYSWGK--NECGQLGLGHTESKDDPSLIEG-LDNQKVEFVACGGSHSALLT 259

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G LFTFG G  G LGH    +   P  V  L   +    +CG WHT A V   G    
Sbjct: 260 QDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLG---- 315

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
                  K+F++G G +GQLG+G    +++PL VKVS
Sbjct: 316 -------KVFSFGSGKDGQLGNGGTRDQLMPLPVKVS 345



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 157/365 (43%), Gaps = 34/365 (9%)

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
           GGA   V    A    A  PK ++    +   S+  G++H ++++  G+ F +   S   
Sbjct: 69  GGAGVQVHQLLAGSGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKH 128

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           L           +    L    I  + CG++H+ A++  G+L+ WG  +H  G LG   +
Sbjct: 129 L-----------RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRK 175

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPR 447
                  ++   + G+ ++ I  G  H+ A++ +G ++++G    G LG G   S   P 
Sbjct: 176 FPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPS 235

Query: 448 EVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR 507
            +E L   K    +CG  H+A + +        +GL    LFT+G G  GQLGH   +  
Sbjct: 236 LIEGLDNQKVEFVACGGSHSALLTQ--------DGL----LFTFGAGKHGQLGHNSTQNE 283

Query: 508 VVPLCVKVSDDISFCKVACGHSITIALTA-TGQVFSMGSADYGQLGSPGSTGK---FPTR 563
           + P  V         ++ACG   T+A  +  G+VFS GS   GQLG+ G+  +    P +
Sbjct: 284 LRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVK 343

Query: 564 IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDK 623
           +  + + + +E        I +      +  W K  N  +    N  +  PTL E    +
Sbjct: 344 VSSSEELK-LESHTSEKELIMIAGGNQSILLWIKKENSYV----NLKRTIPTLNEGTVKR 398

Query: 624 QVKSV 628
            +  V
Sbjct: 399 WIADV 403



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 13/200 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++F WG+ L +G LG    G +  S        P+++E    +    I+ G  H++ ++
Sbjct: 157 GELFAWGQNL-HGQLGV---GRKFPSTTT-----PQIVEHLAGVPLAQISAGEAHSMALS 207

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G I+SWG+   G+LG G       P LI+ L+   +  VACG  H+  +T  G L+T+
Sbjct: 208 MSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTF 267

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G H  G LG  S  +   P  V+ ++ G +++ I CG WHT A ++  GK+F+FG G 
Sbjct: 268 GAGKH--GQLGHNSTQNELRPCLVA-ELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324

Query: 432 FGALGHGDRSSTSVPREVET 451
            G LG+G      +P  V+ 
Sbjct: 325 DGQLGNGGTRDQLMPLPVKV 344



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 116/239 (48%), Gaps = 26/239 (10%)

Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
           + ++I S+  G  H   ++S GK F +           D  S    R    L+E K +  
Sbjct: 95  KNMKIHSVDQGAEHMLILSSDGKPFEY-----------DNYSMKHLRFESILQEKKIIQI 143

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP-RVVPLCVKVSDDI 519
           +CG +H+ A+         S G    +LF WG    GQLG G   P    P  V+    +
Sbjct: 144 TCGDYHSLAL---------SKG---GELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV 191

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIAC 578
              +++ G + ++AL+ +G ++S G  + GQLG   +  K  P+ IEG + ++ +E +AC
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEG-LDNQKVEFVAC 250

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           G  H A+++    ++T+G G +GQLGH   +N+  P LV  L   +V  + CG   T A
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLA 309



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 7/120 (5%)

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY----IEDIAC 578
           ++ CG   ++AL+  G++F+ G   +GQLG      KFP+     I        +  I+ 
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGV---GRKFPSTTTPQIVEHLAGVPLAQISA 198

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G  H   +S    +Y+WGK   GQLG G  E+K  P+L+E L +++V+ V CG + +A +
Sbjct: 199 GEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALL 258


>gi|187954501|gb|AAI40717.1| Hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 118/217 (54%), Gaps = 15/217 (6%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFH 359
           I CG  H++ ++K G++F+WG+   G+LG G +    + P++++ L G  +  ++ GE H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           + A+++SG++Y+WG   +  G LG     S   P  + G ++  ++  + CG  H+A +T
Sbjct: 203 SMALSMSGNIYSWGK--NECGQLGLGHTESKDDPSLIEG-LDNQKVEFVACGGSHSALLT 259

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G LFTFG G  G LGH    +   P  V  L   +    +CG WHT A V   G    
Sbjct: 260 QDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLG---- 315

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
                  K+F++G G +GQLG+G    +++PL VKVS
Sbjct: 316 -------KVFSFGSGKDGQLGNGGTRDQLMPLPVKVS 345



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 157/365 (43%), Gaps = 34/365 (9%)

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
           GGA   V    A    A  PK ++    +   S+  G++H ++++  G+ F +   S   
Sbjct: 69  GGAGVQVHQLLAGSGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKH 128

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           L           +    L    I  + CG++H+ A++  G+L+ WG  +H  G LG   +
Sbjct: 129 L-----------RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRK 175

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPR 447
                  ++   + G+ ++ I  G  H+ A++ +G ++++G    G LG G   S   P 
Sbjct: 176 FPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPS 235

Query: 448 EVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR 507
            +E L   K    +CG  H+A + +        +GL    LFT+G G  GQLGH   +  
Sbjct: 236 LIEGLDNQKVEFVACGGSHSALLTQ--------DGL----LFTFGAGKHGQLGHNSTQNE 283

Query: 508 VVPLCVKVSDDISFCKVACGHSITIALTA-TGQVFSMGSADYGQLGSPGSTGK---FPTR 563
           + P  V         ++ACG   T+A  +  G+VFS GS   GQLG+ G+  +    P +
Sbjct: 284 LRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVK 343

Query: 564 IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDK 623
           +  + + + +E        I +      +  W K  N  +    N  +  PTL E    +
Sbjct: 344 VSSSEELK-LESHTSEKELIMIAGGNQSILLWIKKENSYV----NLKRTIPTLNEGTVKR 398

Query: 624 QVKSV 628
            +  V
Sbjct: 399 WIADV 403



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 13/200 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++F WG+ L +G LG    G +  S        P+++E    +    I+ G  H++ ++
Sbjct: 157 GELFAWGQNL-HGQLGV---GRKFPSTTT-----PQIVEHLAGVPLAQISAGEAHSMALS 207

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G I+SWG+   G+LG G       P LI+ L+   +  VACG  H+  +T  G L+T+
Sbjct: 208 MSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTF 267

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G H  G LG  S  +   P  V+ ++ G +++ I CG WHT A ++  GK+F+FG G 
Sbjct: 268 GAGKH--GQLGHNSTQNELRPCLVA-ELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324

Query: 432 FGALGHGDRSSTSVPREVET 451
            G LG+G      +P  V+ 
Sbjct: 325 DGQLGNGGTRDQLMPLPVKV 344



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/239 (29%), Positives = 116/239 (48%), Gaps = 26/239 (10%)

Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
           + ++I S+  G  H   ++S GK F +           D  S    R    L+E K +  
Sbjct: 95  KNMKIHSVDQGAEHMLILSSDGKPFEY-----------DNYSMKHLRFESILQEKKIIQI 143

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP-RVVPLCVKVSDDI 519
           +CG +H+ A+         S G    +LF WG    GQLG G   P    P  V+    +
Sbjct: 144 TCGDYHSLAL---------SKG---GELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV 191

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIAC 578
              +++ G + ++AL+ +G ++S G  + GQLG   +  K  P+ IEG + ++ +E +AC
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEG-LDNQKVEFVAC 250

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           G  H A+++    ++T+G G +GQLGH   +N+  P LV  L   +V  + CG   T A
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLA 309



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 7/120 (5%)

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY----IEDIAC 578
           ++ CG   ++AL+  G++F+ G   +GQLG      KFP+     I        +  I+ 
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGV---GRKFPSTTTPQIVEHLAGVPLAQISA 198

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G  H   +S    +Y+WGK   GQLG G  E+K  P+L+E L +++V+ V CG + +A +
Sbjct: 199 GEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALL 258


>gi|225424889|ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
          Length = 400

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 183/415 (44%), Gaps = 61/415 (14%)

Query: 253 GDVFIWGEGLG-NGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSI---ACGSKHA 308
           G+V IW  G G +G LG         +    D  LP++L+      A  I   ACG  H 
Sbjct: 10  GEVEIWSWGAGTDGQLG---------TTRLEDEHLPQLLDLPRFSSAGPISLLACGGAHV 60

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           + +T  G++ +WG G+ G+LGHG       PK +  L    +  V+ G  H+  V+ +G 
Sbjct: 61  LALTTDGKVVTWGRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGFVSDTGC 120

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           L+T GDG  + G LG     SH  P KVS   +   +  I CG  H+  +    +++ FG
Sbjct: 121 LFTCGDG--SFGQLGHGDCKSHCSPVKVS-YFDSKHVDQIACGMRHSLVLLKGDQVYGFG 177

Query: 429 DGTFGALG--HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            G  G LG    +  S SVP+    L+ ++ +       H+AA+         +NG    
Sbjct: 178 SGKRGQLGVSMDNTRSISVPQATVGLEGVEIISIDANGDHSAAL--------SANG---- 225

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
            L+TWG       G G       P C+  S  + F +VA G +  + LT  G+VF +G  
Sbjct: 226 HLYTWGR------GFGSTSDVHCPRCLPSS--LCFTQVALGWNHMLVLTGGGEVFMLGGN 277

Query: 547 DYGQLGSP--GSTGKFPTRIE-----------------GNIKHRYIEDIACGSYHIAVVS 587
            +G LG P  GS  K  + IE                   +    +  IA G+ H A+V+
Sbjct: 278 RHGVLGDPQKGSQVKHLSVIEVFLHGPEESREENLEKVQGLDGLNVVQIAAGAEHSALVT 337

Query: 588 SKSEVYTWGKGANGQLGHGDNENKQTPTLVEALR----DKQVKSVVCGSNFTAAI 638
               + TWG G +GQLG G+  ++ +P  V           +  V CGS FT AI
Sbjct: 338 ENRVIKTWGWGEHGQLGLGNTYDQISPQAVRLGHRLPGQHTMIKVYCGSGFTFAI 392


>gi|225461391|ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
           vinifera]
 gi|302143037|emb|CBI20332.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 146/322 (45%), Gaps = 22/322 (6%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGEFH 359
           ++    HA  V + G++F+ G+ S    GHG     +  P+L++AL G     VA G   
Sbjct: 168 VSASHNHAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSF 227

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAI 418
           T  +T+ G +YT G   H  G LG    +    P+ V   +EG+  +  I  GP +  A+
Sbjct: 228 TVFLTMKGHVYTCGTNTH--GQLGHGDTVDRRTPKIVE-LLEGVGPVVQIAAGPSYAMAV 284

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL--KELKTVMASCGVWHTAAIVEVAGK 476
           T  G + +FG G+   LGHG++ +   PR +++   K +  V  S G  H  A+      
Sbjct: 285 TDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALD----- 339

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
                  SS  ++TWG G  G LGHGD   +  P  +         +V      T  L  
Sbjct: 340 -------SSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVD 392

Query: 537 TGQVFSMGSADYGQLGSP--GSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
           TG V+  G   +G LG P  G++ K     I  +++  YI  I+ G YH   V++K +++
Sbjct: 393 TGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVAVNNKGQIF 452

Query: 594 TWGKGANGQLGHGDNENKQTPT 615
            +G     QLGH        PT
Sbjct: 453 GFGDNERAQLGHDTLRGCPVPT 474



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 119/273 (43%), Gaps = 19/273 (6%)

Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
           +  G +HT  +  S  +Y+ G  +   G+LG   E +  +            ++ +    
Sbjct: 116 ITTGRYHTLLIKDS-SVYSCGSSL--CGVLGHGPETTQCVAFSRINFPPLAHVAQVSASH 172

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIV 471
            H A +  +G++FT GD +    GHGD       PR VE LK +     + G+  T  + 
Sbjct: 173 NHAAFVMQSGEVFTCGDNSSFCCGHGDTVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLT 232

Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS-FCKVACGHSI 530
                           ++T G    GQLGHGD   R  P  V++ + +    ++A G S 
Sbjct: 233 ------------MKGHVYTCGTNTHGQLGHGDTVDRRTPKIVELLEGVGPVVQIAAGPSY 280

Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIE--DIACGSYHIAVVSS 588
            +A+T  G V S GS     LG      +   R   + + + I    I+ G  H+  + S
Sbjct: 281 AMAVTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDS 340

Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEALR 621
              VYTWGKG  G LGHGD  +K TP ++ +L+
Sbjct: 341 SGFVYTWGKGYCGALGHGDEIDKTTPEILSSLK 373



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 131/287 (45%), Gaps = 16/287 (5%)

Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL 341
           R    P+++E+   +  + +A G    V +T +G +++ G  + G+LGHG   D   PK+
Sbjct: 202 RPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTPKI 261

Query: 342 IDALNGSN-IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV-SGQ 399
           ++ L G   +  +A G  +  AVT  G ++++G G +    LG   + +   PR + S +
Sbjct: 262 VELLEGVGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNF--CLGHGEQHNELRPRAIQSFR 319

Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
            + + +  I  G  H  A+ S+G ++T+G G  GALGHGD    + P  + +LK    V 
Sbjct: 320 RKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDEIDKTTPEILSSLKSHLAVQ 379

Query: 460 ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW-GDGAEGQLGHGDAEPRVVPLCVKVSDD 518
                  T  +V+  G   G         F W G G+ G    G ++  + P  +     
Sbjct: 380 VCARKRKTFVLVD-TGSVYG---------FGWMGFGSLGFPDRGASDKVMRPWILDSLRG 429

Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRI 564
               +++ G   T+A+   GQ+F  G  +  QLG     G   PT I
Sbjct: 430 HYISQISTGLYHTVAVNNKGQIFGFGDNERAQLGHDTLRGCPVPTEI 476



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 111/245 (45%), Gaps = 22/245 (8%)

Query: 278 SADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS 337
           + DRR   + ++LE   V     IA G  +A+ VT  G + S+G GS   LGHG + +  
Sbjct: 253 TVDRRTPKIVELLEG--VGPVVQIAAGPSYAMAVTDDGTVHSFGSGSNFCLGHGEQHNEL 310

Query: 338 YPKLIDALNGSNIHMV--ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRK 395
            P+ I +     IH+V  + G+ H  A+  SG +YTWG G    G LG   EI    P  
Sbjct: 311 RPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGY--CGALGHGDEIDKTTPEI 368

Query: 396 VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV---PREVETL 452
           +S     L +  +C     T  +   G ++ FG   FG+LG  DR ++     P  +++L
Sbjct: 369 LSSLKSHLAV-QVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMRPWILDSL 427

Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC 512
           +       S G++HT A+             +  ++F +GD    QLGH       VP  
Sbjct: 428 RGHYISQISTGLYHTVAVN------------NKGQIFGFGDNERAQLGHDTLRGCPVPTE 475

Query: 513 VKVSD 517
           + V +
Sbjct: 476 IFVQE 480



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 108/250 (43%), Gaps = 26/250 (10%)

Query: 384 QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
           Q  E S +I    +G M+      I  G +HT  I  +  +++ G    G LGHG  ++ 
Sbjct: 98  QSVEQSSYISETSAGNMQ------ITTGRYHTLLIKDS-SVYSCGSSLCGVLGHGPETTQ 150

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
            V         L  V       + AA V           + S ++FT GD +    GHGD
Sbjct: 151 CVAFSRINFPPLAHVAQVSASHNHAAFV-----------MQSGEVFTCGDNSSFCCGHGD 199

Query: 504 -AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGS----TG 558
              P   P  V+    +   +VA G S T+ LT  G V++ G+  +GQLG   +    T 
Sbjct: 200 TVRPIFRPRLVEALKGVPCKQVAAGLSFTVFLTMKGHVYTCGTNTHGQLGHGDTVDRRTP 259

Query: 559 KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
           K    +EG      +  IA G  +   V+    V+++G G+N  LGHG+  N+  P  ++
Sbjct: 260 KIVELLEGVGP---VVQIAAGPSYAMAVTDDGTVHSFGSGSNFCLGHGEQHNELRPRAIQ 316

Query: 619 ALRDKQVKSV 628
           + R K +  V
Sbjct: 317 SFRRKTIHVV 326



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 10/180 (5%)

Query: 276 ISSADRRDALLPKVLES--TVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
           +   ++ + L P+ ++S     +    I+ G +H V +   G +++WG+G  G LGHG E
Sbjct: 301 LGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGHGDE 360

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSE---IS 389
            D + P+++ +L       V   +  T  +  +G +Y +G  G  +LG   + +    + 
Sbjct: 361 IDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSLGFPDRGASDKVMR 420

Query: 390 HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV 449
            WI   + G      IS I  G +HT A+ + G++F FGD     LGH       VP E+
Sbjct: 421 PWILDSLRGHY----ISQISTGLYHTVAVNNKGQIFGFGDNERAQLGHDTLRGCPVPTEI 476



 Score = 50.1 bits (118), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 64/169 (37%), Gaps = 13/169 (7%)

Query: 209 NFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLG 268
           NF    G      R     SFR      V  S+        D  G V+ WG+G    L  
Sbjct: 298 NFCLGHGEQHNELRPRAIQSFRRKTIHVVRISAGDEHVVALDSSGFVYTWGKGYCGALGH 357

Query: 269 GAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKL 328
           G          D  D   P++L S     A  +    +   ++   G ++ +G    G L
Sbjct: 358 G----------DEIDKTTPEILSSLKSHLAVQVCARKRKTFVLVDTGSVYGFGWMGFGSL 407

Query: 329 G---HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
           G    G    V  P ++D+L G  I  ++ G +HT AV   G ++ +GD
Sbjct: 408 GFPDRGASDKVMRPWILDSLRGHYISQISTGLYHTVAVNNKGQIFGFGD 456


>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
          Length = 395

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 185/410 (45%), Gaps = 59/410 (14%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           V  WG G  +G LG  + G E     R  A L  +  S VV        GS++++ +   
Sbjct: 13  VLAWGSGE-DGQLG--MGGYEEEDWARGVAALDALAVSAVV-------AGSRNSLAICAD 62

Query: 315 GQIFSWGEGSGGKLGHGVEADV-SYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           G++F+WG    G LGH  E    S P  +DAL G +I   A G +H  AV   G  Y WG
Sbjct: 63  GRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWG 122

Query: 374 DGIHNLGLLGQVSEISH----------WIPRKVSGQMEGLQISSICCGPWHTAAITSAGK 423
              +  G  G+ +E              IP++ + +   L++  +  G  H+  +T  G 
Sbjct: 123 G--NEYGQCGEEAERKEDGTRALRRDIPIPQRCAPK---LKVRQVAAGGTHSVVLTQDGH 177

Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
           ++T+G         GD    S P  V+ L+ +K +  + G +H  A+ E        +G+
Sbjct: 178 VWTWGQ----PWPPGDIKQISTPVRVQGLENVKVI--AVGAFHNLALTE--------DGI 223

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
               L+ WG+   GQLG GD +PR  P+ V+   D+S   +A G   + ALT  G+V++ 
Sbjct: 224 ----LWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAW 279

Query: 544 GSADYGQL--GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           G  ++G+L  G   S+   P ++E  +    I  ++CG  H   ++    ++++G+G +G
Sbjct: 280 GRGEHGRLGFGDDKSSHMVPQKVE-LLAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHG 338

Query: 602 QLGHGDNENKQTPTLV------------EALRDKQVKSVVCGSNFTAAIC 639
           +LG+G       P  V            ++    Q + V CG   T AI 
Sbjct: 339 RLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAIA 388


>gi|198421783|ref|XP_002126864.1| PREDICTED: similar to MGC115292 protein [Ciona intestinalis]
          Length = 475

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 176/391 (45%), Gaps = 50/391 (12%)

Query: 282 RDALLPKVLESTVVLDAQSI--ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYP 339
           ++   P   +S V +    +   C S H +++T +G ++SWG    G+LGHG       P
Sbjct: 85  KNLFKPHRYKSLVGIKVSRVITGCCSNHNLIITNEGNVYSWGRNECGQLGHGNRVRYDSP 144

Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ 399
           K ID+L    +   A G+ HT  +T +GD++ +GD     G LG +  +S  +P      
Sbjct: 145 KPIDSLQSYKVVNGATGKNHTLCLTENGDVFAFGDNAQ--GQLG-LGNLSTNVPSPTHIA 201

Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGD----------------RSST 443
            +G  I  + CG   +  +   G +++FG   +G LG+                  +++ 
Sbjct: 202 YKGNPIVDVSCGGEFSVILDCEGYVYSFGCPEYGQLGNNTDGKYFASGNKMAFDNVKNAF 261

Query: 444 SVPREVETLK--------ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGA 495
            +P  VE LK        ++K    SCG  H  A+             S K++FTWG G 
Sbjct: 262 RIPLWVEKLKGGQVLPLNDVKITSISCGNNHVVALD------------SKKRVFTWGFGG 309

Query: 496 EGQLGHGDAEPRVVPLCVKVSDDI--SFCKVACGHSITIALTATGQVFSMGSADYGQLGS 553
            G+LGH + +    P  + V +       +V  G+S +IAL   G     G    G + S
Sbjct: 310 YGRLGHSEQKDEHTPRLLTVFERAGRGAVQVYAGYSFSIALNEMGSTMFWGLQ--GSISS 367

Query: 554 PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG-ANGQLGHGDN-ENK 611
             +T  +P  +  +++   I  I CG  H  VV++   V  WG G +NG+LG G++ ++ 
Sbjct: 368 RETT-MYPKPLP-DLQGWEIRSIGCGYRH-TVVAADESVIVWGTGTSNGELGLGESRKSS 424

Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHK 642
             P L+++  +  ++ V CG   T  I  +K
Sbjct: 425 ANPDLMKSASNLFIQRVSCGQTHTLMIARNK 455



 Score = 45.4 bits (106), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 3/98 (3%)

Query: 273 GVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEG-SGGKLGHG 331
           G++ S + R   + PK L      + +SI CG +H V+   +  +  WG G S G+LG G
Sbjct: 360 GLQGSISSRETTMYPKPLPDLQGWEIRSIGCGYRHTVVAADE-SVIVWGTGTSNGELGLG 418

Query: 332 VEADVSY-PKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
                S  P L+ + +   I  V+CG+ HT  +  + D
Sbjct: 419 ESRKSSANPDLMKSASNLFIQRVSCGQTHTLMIARNKD 456


>gi|295789061|ref|NP_001171424.1| X-linked retinitis pigmentosa GTPase regulator isoform 5 [Mus
           musculus]
 gi|26332729|dbj|BAC30082.1| unnamed protein product [Mus musculus]
          Length = 557

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 165/351 (47%), Gaps = 53/351 (15%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           ++CG +H  +VT   +++ +G  + G+LG G +A +  P  I AL    + + ACG  HT
Sbjct: 78  LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 137

Query: 361 CAVTLSGDLYTWGDGIHNLGLLG--------QVSEISHWIPRKVSGQMEGLQISSICCGP 412
              T +G +Y  G   +N G LG           +I  + P           I  +  G 
Sbjct: 138 LVSTDTGGVYAAGG--NNEGQLGLGDTDDRDTFHQIVFFTPADT--------IKQLSAGA 187

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
             +AA+T  GKLF +GD + G +G  D+S+  +P EV   K +  +  SCG +H+A +  
Sbjct: 188 NTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYHSAFVT- 244

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-------AEPRVVPLCVKVSDDISFCKVA 525
                         +L+T+G+   G+LG  +       +  RV+ +  +V       +VA
Sbjct: 245 -----------MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERV------IQVA 287

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT---RIEGNIKHRYIEDIACGSYH 582
           CG   T+ LT    V++ G   +GQLG    T  F T   +I   IK + I  I+CG  H
Sbjct: 288 CGGGHTVVLTEK-VVYAFGLGQFGQLGL--GTFLFETSEPKIIERIKDQKICHISCGENH 344

Query: 583 IAVVSSKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
            A+++    +YT+G G +G+LG G  +  N+  PTL        V+ + CG
Sbjct: 345 TALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 395



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 143/297 (48%), Gaps = 33/297 (11%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDALNGSNIHMVACGEFHT 360
           ACG  H ++ T  G +++ G  + G+LG G   D  ++ +++       I  ++ G   +
Sbjct: 131 ACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTS 190

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+T  G L+ WGD  ++ G +G   + +  IP +V+    G  IS I CG +H+A +T 
Sbjct: 191 AALTEDGKLFMWGD--NSEGQIGLEDKSNVCIPHEVT---VGKPISWISCGYYHSAFVTM 245

Query: 421 AGKLFTFGDGTFGALGHGDR--SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
            G+L+TFG+   G LG  +    +   P+ V  + E + +  +CG  HT  + E      
Sbjct: 246 DGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTE------ 298

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHG-----DAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
                  K ++ +G G  GQLG G      +EP++    ++   D   C ++CG + T  
Sbjct: 299 -------KVVYAFGLGQFGQLGLGTFLFETSEPKI----IERIKDQKICHISCGENHTAL 347

Query: 534 LTATGQVFSMGSADYGQ--LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
           +T  G +++ G   +G+  LG    T +F   +  N     ++ IACG  H+ V ++
Sbjct: 348 MTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFAT 404



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 120/264 (45%), Gaps = 35/264 (13%)

Query: 215 GLDDANSRSS--------TADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGL 266
           GL D + R +         AD+ +  LS+  ++S+  +  ED    G +F+WG+      
Sbjct: 158 GLGDTDDRDTFHQIVFFTPADTIK-QLSAGANTSA--ALTED----GKLFMWGDN----- 205

Query: 267 LGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGG 326
                +  +I   D+ +  +P   E TV      I+CG  H+  VT  G+++++GE   G
Sbjct: 206 -----SEGQIGLEDKSNVCIPH--EVTVGKPISWISCGYYHSAFVTMDGELYTFGEPENG 258

Query: 327 KLGHGVEADVSY--PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQ 384
           KLG   E  +++  P+ +  +    I  VACG  HT  +T   +   +  G+   G LG 
Sbjct: 259 KLGLPNELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVLT---EKVVYAFGLGQFGQLGL 314

Query: 385 VSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS 444
            + +      K+  +++  +I  I CG  HTA +T  G L+TFGDG  G LG G  + T+
Sbjct: 315 GTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTN 374

Query: 445 --VPREVETLKELKTVMASCGVWH 466
              P            + +CG  H
Sbjct: 375 QFFPTLCSNFLRFAVQLIACGGCH 398



 Score = 51.6 bits (122), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 11/129 (8%)

Query: 507 RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEG 566
           RV P        I F       S ++ +  TG VF+ G   + +          P++   
Sbjct: 20  RVAPAIFPKQAQIPFAGFGMAESESL-VPDTGAVFTFGKTKFAE--------NIPSKFW- 69

Query: 567 NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVK 626
             K+     ++CG  H A+V+  +++Y +G    GQLG G       PT ++AL+ ++VK
Sbjct: 70  -FKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVK 128

Query: 627 SVVCGSNFT 635
              CG N T
Sbjct: 129 LAACGRNHT 137


>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 754

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 192/403 (47%), Gaps = 55/403 (13%)

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG 356
           D  +IA G  H++ + K G +++WG    G+LG+G   D   P  +   N  ++  +A G
Sbjct: 248 DVVAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDSYDP--VQVKNLKDVVAIAAG 305

Query: 357 EFHTCAVTLSGDLYTWGDGIHNLGLLGQ-VSEISHWIPRKVSGQMEGLQ-ISSICCGPWH 414
           E H+ A+   G ++ WGD  +  G LG  +SE        V  Q + L+ + +I  G  H
Sbjct: 306 ENHSLALKKDGTIWAWGD--NEWGQLGNSISE-----KLCVPVQFKSLKDVVAIAAGCEH 358

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           + A+   G ++++G+  +G LG+G+   + VP +V  LK++                 VA
Sbjct: 359 SLALKKDGTVWSWGNNYYGQLGNGNSIDSYVPVQVRGLKDV-----------------VA 401

Query: 475 GKTSGSNGLSSKK---LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
             T  ++ L+ KK   ++ WG+   GQLG+G  +   VP+ VK   D+    +A G   +
Sbjct: 402 IATGNAHSLALKKDGTVWAWGNNEFGQLGNGTNKSSFVPVQVKGLKDV--VAIAAGSDHS 459

Query: 532 IALTATGQVFSMGSADYGQLGS-PGSTGKF---PTRIEGNIKHRYIEDIACGSYHIAVVS 587
           +A    G V++ G+ ++GQLG+  G  G++   P +++G    + +  +A GS H   + 
Sbjct: 460 LAFKKDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQVKG---LKDVVAVAAGSVHSLALK 516

Query: 588 SKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
               ++ WG   +G LG+ D E    P  V+ L+D  V ++  GSN +  + L K     
Sbjct: 517 KDGTIWAWGSNYHGLLGN-DIERSFVPVQVKGLKD--VVAIAAGSNHS--LVLKK----- 566

Query: 648 DHSICSGCRNQFNFRRRRHNCYNCGLVYCKLCSSKKSMKTALA 690
           D ++ +     F+         N  LVY  +    K +K  +A
Sbjct: 567 DGTVWAWGEVWFDLLNE-----NSRLVYSSVPVQIKGLKDVVA 604



 Score =  116 bits (290), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 178/382 (46%), Gaps = 58/382 (15%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           G V+ WG      LGNG            S D  D +  K L+  V     +IA G  H+
Sbjct: 266 GTVWAWGNNYYGQLGNG-----------KSEDSYDPVQVKNLKDVV-----AIAAGENHS 309

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           + + K G I++WG+   G+LG+ +   +  P    +L   ++  +A G  H+ A+   G 
Sbjct: 310 LALKKDGTIWAWGDNEWGQLGNSISEKLCVPVQFKSL--KDVVAIAAGCEHSLALKKDGT 367

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +++WG+  +  G LG  + I  ++P +V G  +   + +I  G  H+ A+   G ++ +G
Sbjct: 368 VWSWGNNYY--GQLGNGNSIDSYVPVQVRGLKD---VVAIATGNAHSLALKKDGTVWAWG 422

Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
           +  FG LG+G   S+ VP +V+ LK++  + A     H+ A      K  G+       +
Sbjct: 423 NNEFGQLGNGTNKSSFVPVQVKGLKDVVAIAAGSD--HSLAF-----KKDGT-------V 468

Query: 489 FTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
           + WG+   GQLG+G     +   VP+ VK   D+    VA G   ++AL   G +++ GS
Sbjct: 469 WAWGNNEFGQLGNGSGGYGQYYAVPVQVKGLKDV--VAVAAGSVHSLALKKDGTIWAWGS 526

Query: 546 ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
             +G LG+       P +++G    + +  IA GS H  V+     V+ WG+     L  
Sbjct: 527 NYHGLLGNDIERSFVPVQVKG---LKDVVAIAAGSNHSLVLKKDGTVWAWGEVWFDLL-- 581

Query: 606 GDNENKQ-----TPTLVEALRD 622
             NEN +      P  ++ L+D
Sbjct: 582 --NENSRLVYSSVPVQIKGLKD 601



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 152/319 (47%), Gaps = 36/319 (11%)

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG-SNIHMVAC 355
           D  +IA GS H++   K G +++WG    G+LG+G      Y  +   + G  ++  VA 
Sbjct: 448 DVVAIAAGSDHSLAFKKDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQVKGLKDVVAVAA 507

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
           G  H+ A+   G ++ WG   H  GLLG   E S  +P +V G  +   + +I  G  H+
Sbjct: 508 GSVHSLALKKDGTIWAWGSNYH--GLLGNDIERSF-VPVQVKGLKD---VVAIAAGSNHS 561

Query: 416 AAITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
             +   G ++ +G+  F  L    R   +SVP +++ LK+               +V +A
Sbjct: 562 LVLKKDGTVWAWGEVWFDLLNENSRLVYSSVPVQIKGLKD---------------VVAIA 606

Query: 475 GKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPR-VVPLCVKVSDDISFCKVACGHSITI 532
                S GL     ++ WGD   GQLG+   E   +VP+ VK   DI    +A G   ++
Sbjct: 607 AGEHHSLGLKKDGTVWAWGDNFFGQLGNSPREKYSLVPVQVKGLKDI--LAIATGEWHSL 664

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGK-----FPTRIEGNIKHRYIEDIACGSYHIAVVS 587
           A+   G V++ G    GQLG+  ++GK      P +++G IK   +  I+ GSYH   + 
Sbjct: 665 AIKKDGTVWAWGENSTGQLGNE-TSGKDKYSYVPVQVKG-IKD--VLAISAGSYHSLALK 720

Query: 588 SKSEVYTWGKGANGQLGHG 606
               V+ WG  A GQLG+G
Sbjct: 721 KDGTVWGWGANARGQLGNG 739



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 176/405 (43%), Gaps = 65/405 (16%)

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS-YPKLIDALNGSNIHMVAC 355
           D  +IA G  H++ + K G +++WG    G+LG+    + S  P  +  L   ++  +A 
Sbjct: 95  DVVAIAAGRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEYSIVPVQVKGL--KDVVAIAA 152

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
           G+ ++  +   G ++ WG       + G   + S  +P ++ G  +   + +I  G  ++
Sbjct: 153 GDGYSLGLKKDGTVWCWGLNESIQVIDGSNKDFS--VPFQIKGLKD---VVAIAAGKDYS 207

Query: 416 AAITSAGK--LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA---- 469
            A+   G   ++ +    +  L  G    + VP +VE LK++  V  + G +H+ A    
Sbjct: 208 LALKKDGTVWMWEYKYNYYEQLRRGADEYSPVPVQVEGLKDV--VAIAAGRYHSLALKKD 265

Query: 470 ------------------------------IVEVAGKTSGSN-GLSSKK---LFTWGDGA 495
                                         + +V    +G N  L+ KK   ++ WGD  
Sbjct: 266 GTVWAWGNNYYGQLGNGKSEDSYDPVQVKNLKDVVAIAAGENHSLALKKDGTIWAWGDNE 325

Query: 496 EGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG 555
            GQLG+  +E   VP+  K   D+      C HS  +AL   G V+S G+  YGQLG+  
Sbjct: 326 WGQLGNSISEKLCVPVQFKSLKDVVAIAAGCEHS--LALKKDGTVWSWGNNYYGQLGNGN 383

Query: 556 STGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
           S   + P ++ G    + +  IA G+ H   +     V+ WG    GQLG+G N++   P
Sbjct: 384 SIDSYVPVQVRG---LKDVVAIATGNAHSLALKKDGTVWAWGNNEFGQLGNGTNKSSFVP 440

Query: 615 TLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQF 659
             V+ L+D  V ++  GS+ + A          D ++ +   N+F
Sbjct: 441 VQVKGLKD--VVAIAAGSDHSLAFK-------KDGTVWAWGNNEF 476



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 50/304 (16%)

Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISS 407
           +NI  +A G +H+ A  L GD   W  G ++ G  G  +E S  IP KV G  +   + +
Sbjct: 46  NNIIQIAAGNYHSLA--LKGDGTVWAWGWNHWGQCG--TEESSIIPVKVKGLKD---VVA 98

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS-VPREVETLKELKTVMASCGVWH 466
           I  G +H+  +   G ++ +G    G LG+ D    S VP +V+ LK++  + A  G   
Sbjct: 99  IAAGRYHSLTLKKDGTVWAWGSNKDGQLGNRDAGEYSIVPVQVKGLKDVVAIAAGDGY-- 156

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
                 +  K  G+       ++ WG     Q+  G  +   VP  +K   D+    +A 
Sbjct: 157 -----SLGLKKDGT-------VWCWGLNESIQVIDGSNKDFSVPFQIKGLKDV--VAIAA 202

Query: 527 GHSITIALTATGQVFSM------------GSADYGQLGSPGSTGKFPTRIEGNIKHRYIE 574
           G   ++AL   G V+              G+ +Y    SP      P ++EG    + + 
Sbjct: 203 GKDYSLALKKDGTVWMWEYKYNYYEQLRRGADEY----SP-----VPVQVEG---LKDVV 250

Query: 575 DIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNF 634
            IA G YH   +     V+ WG    GQLG+G +E+   P  V+ L+D  V ++  G N 
Sbjct: 251 AIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDSYDPVQVKNLKD--VVAIAAGENH 308

Query: 635 TAAI 638
           + A+
Sbjct: 309 SLAL 312



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 125/270 (46%), Gaps = 65/270 (24%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G ++ WG    +GLLG           D   + +P  ++   + D  +IA GS H++++ 
Sbjct: 519 GTIWAWGSNY-HGLLGN----------DIERSFVP--VQVKGLKDVVAIAAGSNHSLVLK 565

Query: 313 KQGQIFSWGEGSGGKLGHGVEADV----------SYPKLIDALNGSNIHMVACGEFHTCA 362
           K G +++WGE         V  D+          S P  I  L   ++  +A GE H+  
Sbjct: 566 KDGTVWAWGE---------VWFDLLNENSRLVYSSVPVQIKGL--KDVVAIAAGEHHSLG 614

Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRK----VSGQMEGLQ-ISSICCGPWHTAA 417
           +   G ++ WGD     G LG         PR+    V  Q++GL+ I +I  G WH+ A
Sbjct: 615 LKKDGTVWAWGDNF--FGQLGNS-------PREKYSLVPVQVKGLKDILAIATGEWHSLA 665

Query: 418 ITSAGKLFTFGDGTFGALGH---GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
           I   G ++ +G+ + G LG+   G    + VP +V+ +K++  +  S G +H+ A+    
Sbjct: 666 IKKDGTVWAWGENSTGQLGNETSGKDKYSYVPVQVKGIKDVLAI--SAGSYHSLAL---- 719

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDA 504
            K  G+       ++ WG  A GQLG+G A
Sbjct: 720 -KKDGT-------VWGWGANARGQLGNGGA 741


>gi|219129772|ref|XP_002185055.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403550|gb|EEC43502.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 727

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 195/450 (43%), Gaps = 77/450 (17%)

Query: 259 GEGLGNGLLGGAVNGV----EISSADRRDALLPKVLESTV---VLDAQSIACGS----KH 307
           G+  G G  G A  GV    ++    RRD  LP+ L   +   V   Q  A G      H
Sbjct: 225 GQFCGAGGSGVAAWGVGRRGQLGHGKRRDERLPRRLRGGIGYAVRIVQVSAGGGLVRVAH 284

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEA-----DVSYPKLIDALNGSNIHMVACGEFHTCA 362
           ++L+T  G++ S+G G  G LGHG  A     DV  P+ ++ L    +  VA GE H+  
Sbjct: 285 SLLLTSTGRVLSFGTGQYGALGHGYSAAKQLPDVMRPQYVEGLAHVRVCCVAAGELHSAV 344

Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS-GQMEGLQISSICCGPWHTAAITSA 421
           VT  GD+YTWGDG    G LG   +     PR+V+ G +E   ++SI CG  HT A+T  
Sbjct: 345 VTSDGDVYTWGDGF--CGQLGHADKRPQLAPRQVTAGGLEDEVVASISCGSRHTLAVTED 402

Query: 422 GKLFTFGDGTFGALGHGDRSST-----------------------SVPREVETLKE-LKT 457
           G++F++G G FG LG   RS T                       +VP  V  + + +  
Sbjct: 403 GEVFSWGLGHFGVLG---RSFTPFDYDADAAVVNFTVEETLPVDGAVPIPVARIPDNVAP 459

Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
            + S      AA   + G+   +  ++   L          L   D+  + +P  ++   
Sbjct: 460 AVDSFPPRDAAAPALLEGRNFAAELMAHLDLIA-------NLSLDDSSDQCIPKVIESLQ 512

Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRI--------EGNI 568
            I     + GH  ++ L+  G ++S G+   G LG   +  +  P RI        +G+ 
Sbjct: 513 GIPMVGASAGHRHSLLLSQEGALYSCGAGSGGCLGHGDTQSQMHPVRITAFDEPEEDGSE 572

Query: 569 KHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQT-PTLVEALRDKQ--- 624
           + R ++ ++ G      VS++  VY WGK   G++G G   N+ T P  V   R++    
Sbjct: 573 RTRILQ-MSAGVDISMAVSTRGSVYGWGKTDGGRIGLGMARNQVTLPRRVSVYREEDGSP 631

Query: 625 ----------VKSVVCGSNFTAAICLHKGV 644
                     V S+V G + T  +C   GV
Sbjct: 632 VLAVDVECGYVHSIVVGLDGTIHMCGGVGV 661



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 91/381 (23%), Positives = 163/381 (42%), Gaps = 59/381 (15%)

Query: 283 DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI 342
           D + P+ +E    +    +A G  H+ +VT  G +++WG+G  G+LGH  +     P+ +
Sbjct: 317 DVMRPQYVEGLAHVRVCCVAAGELHSAVVTSDGDVYTWGDGFCGQLGHADKRPQLAPRQV 376

Query: 343 DA--LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQ---------------- 384
            A  L    +  ++CG  HT AVT  G++++WG G  + G+LG+                
Sbjct: 377 TAGGLEDEVVASISCGSRHTLAVTEDGEVFSWGLG--HFGVLGRSFTPFDYDADAAVVNF 434

Query: 385 -VSE---ISHWIPRKVSGQMEGLQISSICCGPWHTAAITS------AGKLFTFGDGTFGA 434
            V E   +   +P  V+   + +  +     P   AA         A +L    D     
Sbjct: 435 TVEETLPVDGAVPIPVARIPDNVAPAVDSFPPRDAAAPALLEGRNFAAELMAHLD-LIAN 493

Query: 435 LGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG 494
           L   D S   +P+ +E+L+ +  V AS G  H+  + +               L++ G G
Sbjct: 494 LSLDDSSDQCIPKVIESLQGIPMVGASAGHRHSLLLSQ------------EGALYSCGAG 541

Query: 495 AEGQLGHGDAEPRVVPLCVKVSDD--------ISFCKVACGHSITIALTATGQVFSMGSA 546
           + G LGHGD + ++ P+ +   D+            +++ G  I++A++  G V+  G  
Sbjct: 542 SGGCLGHGDTQSQMHPVRITAFDEPEEDGSERTRILQMSAGVDISMAVSTRGSVYGWGKT 601

Query: 547 DYGQLGSPGSTGK--FPTRI----EGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK-GA 599
           D G++G   +  +   P R+    E +       D+ CG  H  VV     ++  G  G 
Sbjct: 602 DGGRIGLGMARNQVTLPRRVSVYREEDGSPVLAVDVECGYVHSIVVGLDGTIHMCGGVGV 661

Query: 600 NGQL-GHGDNENKQTPTLVEA 619
            G+  G   NE  ++ T+ +A
Sbjct: 662 EGEADGQEQNEESKSATVGKA 682



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 137/348 (39%), Gaps = 83/348 (23%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLD--AQSIACGSKHAVL 310
           GDV+ WG+G             ++  AD+R  L P+ + +  + D    SI+CGS+H + 
Sbjct: 349 GDVYTWGDGFCG----------QLGHADKRPQLAPRQVTAGGLEDEVVASISCGSRHTLA 398

Query: 311 VTKQGQIFSWGEGSGGKLGHG----------------------VEADVSYP--------- 339
           VT+ G++FSWG G  G LG                        V+  V  P         
Sbjct: 399 VTEDGEVFSWGLGHFGVLGRSFTPFDYDADAAVVNFTVEETLPVDGAVPIPVARIPDNVA 458

Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ 399
             +D+    +    A  E    A  L   L    D I NL L     +    IP KV   
Sbjct: 459 PAVDSFPPRDAAAPALLEGRNFAAELMAHL----DLIANLSLDDSSDQC---IP-KVIES 510

Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE----- 454
           ++G+ +     G  H+  ++  G L++ G G+ G LGHGD  S   P  +    E     
Sbjct: 511 LQGIPMVGASAGHRHSLLLSQEGALYSCGAGSGGCLGHGDTQSQMHPVRITAFDEPEEDG 570

Query: 455 ---LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VP 510
               + +  S GV      + +A  T GS       ++ WG    G++G G A  +V +P
Sbjct: 571 SERTRILQMSAGV-----DISMAVSTRGS-------VYGWGKTDGGRIGLGMARNQVTLP 618

Query: 511 LCVKVSDD-----ISFCKVACG--HSITIALTAT----GQVFSMGSAD 547
             V V  +     +    V CG  HSI + L  T    G V   G AD
Sbjct: 619 RRVSVYREEDGSPVLAVDVECGYVHSIVVGLDGTIHMCGGVGVEGEAD 666



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 95/232 (40%), Gaps = 34/232 (14%)

Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGK--LFTFGDGTFGALGHGDRSSTSVPREV 449
           +PR V G+   +      C          AG   +  +G G  G LGHG R    +PR +
Sbjct: 201 LPRSVQGRFASVSPEHSLCRVGGDGQFCGAGGSGVAAWGVGRRGQLGHGKRRDERLPRRL 260

Query: 450 ETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL----------SSKKLFTWGDGAEGQL 499
                        G+ +   IV+V    S   GL          S+ ++ ++G G  G L
Sbjct: 261 RG-----------GIGYAVRIVQV----SAGGGLVRVAHSLLLTSTGRVLSFGTGQYGAL 305

Query: 500 GHGDAEPRVVPLCVKVS-----DDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSP 554
           GHG +  + +P  ++         +  C VA G   +  +T+ G V++ G    GQLG  
Sbjct: 306 GHGYSAAKQLPDVMRPQYVEGLAHVRVCCVAAGELHSAVVTSDGDVYTWGDGFCGQLGHA 365

Query: 555 GSTGKFPTR--IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
               +   R    G ++   +  I+CGS H   V+   EV++WG G  G LG
Sbjct: 366 DKRPQLAPRQVTAGGLEDEVVASISCGSRHTLAVTEDGEVFSWGLGHFGVLG 417



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 20/205 (9%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           +S  D  D  +PKV+ES   +     + G +H++L++++G ++S G GSGG LGHG    
Sbjct: 494 LSLDDSSDQCIPKVIESLQGIPMVGASAGHRHSLLLSQEGALYSCGAGSGGCLGHGDTQS 553

Query: 336 VSYPKLIDALNG--------SNIHMVACGEFHTCAVTLSGDLYTWG--DGIHNLGLLGQV 385
             +P  I A +         + I  ++ G   + AV+  G +Y WG  DG   +GL    
Sbjct: 554 QMHPVRITAFDEPEEDGSERTRILQMSAGVDISMAVSTRGSVYGWGKTDG-GRIGLGMAR 612

Query: 386 SEISHWIPRKVSGQME----GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS 441
           ++++  +PR+VS   E     +    + CG  H+  +   G +   G    G  G  D  
Sbjct: 613 NQVT--LPRRVSVYREEDGSPVLAVDVECGYVHSIVVGLDGTIHMCGG--VGVEGEADGQ 668

Query: 442 STSVPREVETLKELKTVMASCGVWH 466
             +   +  T+ + + V     VWH
Sbjct: 669 EQNEESKSATVGKARAV-PDFNVWH 692


>gi|328865764|gb|EGG14150.1| ankyrin repeat-containing protein [Dictyostelium fasciculatum]
          Length = 1011

 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 161/376 (42%), Gaps = 45/376 (11%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           ++  G   A+++T  G I+SWG  S GKLG   + D   P  I  L    I  +ACG+ H
Sbjct: 225 NVQFGGNFALMLTDTGMIYSWGLCSYGKLGQYSKNDCPIPSQIMELKNKQITQIACGKDH 284

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           + A+   G +Y WG+G      L +   +S  +P  V+   + +++  I CG  H+ A+ 
Sbjct: 285 SLALDEIGCVYAWGNGAGGRLGLNKTDVVS--LPTMVAHFPDQVKVVGIACGQDHSMAVC 342

Query: 420 SAGKLFTFGDGTFGALGHGD-RSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
             G++F++G   FG LG+ +     S PR VE++   K V  SCG WH+  +      T+
Sbjct: 343 QDGRVFSWGQAGFGKLGYSNPMGFQSTPRRVESIPACKQV--SCGNWHSLTL------TN 394

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
           G +      ++ +G   EG+ G         P  V    +I   K+  G +    LT + 
Sbjct: 395 GGD------VYAFGSNREGRCGRELTTVESPPNRVIFDANIKIKKIGAGLNFNAVLTTSN 448

Query: 539 QVFSMGSADYGQLG----------------------------SPGSTGKFPTRIEGNIKH 570
            +++ G+ D GQLG                            +   T  +  ++   +  
Sbjct: 449 MIYTWGNNDKGQLGVLIETKSNSTNNSRNNNNNNNYISVYAATLNDTYTYVPQLVKTLLP 508

Query: 571 RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
             I +I  G  H+ V++   EV T+G     QLGHG+            +++K     + 
Sbjct: 509 YPINNIEVGYEHVVVLTDAGEVITFGSNQMDQLGHGELLRDAGTFRKVEIQNKSTVFKIA 568

Query: 631 GSNFTAAICLHKGVSI 646
             N+ + + L  G SI
Sbjct: 569 AGNYASLVSLSSGHSI 584



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 143/301 (47%), Gaps = 42/301 (13%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF---HTCAVTLSGDLYTWG 373
            + WG+    +L  G    VS P+ +   N    H V+  +F       +T +G +Y+WG
Sbjct: 191 FYQWGQMFTTQLSLG---KVSTPQTV-LFNHHQEHGVSNVQFGGNFALMLTDTGMIYSWG 246

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
             + + G LGQ S+    IP ++  +++  QI+ I CG  H+ A+   G ++ +G+G  G
Sbjct: 247 --LCSYGKLGQYSKNDCPIPSQIM-ELKNKQITQIACGKDHSLALDEIGCVYAWGNGAGG 303

Query: 434 ALGHGDRSSTSVPREVETL-KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            LG       S+P  V     ++K V  +CG  H+ A+ +              ++F+WG
Sbjct: 304 RLGLNKTDVVSLPTMVAHFPDQVKVVGIACGQDHSMAVCQ------------DGRVFSWG 351

Query: 493 DGAEGQLGHGD-----AEPRVVPLCVKVSDDISFCK-VACGHSITIALTATGQVFSMGSA 546
               G+LG+ +     + PR V       + I  CK V+CG+  ++ LT  G V++ GS 
Sbjct: 352 QAGFGKLGYSNPMGFQSTPRRV-------ESIPACKQVSCGNWHSLTLTNGGDVYAFGSN 404

Query: 547 DYGQLGSPGSTGKFPTR---IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
             G+ G   +T + P      + NIK   I+ I  G    AV+++ + +YTWG    GQL
Sbjct: 405 REGRCGRELTTVESPPNRVIFDANIK---IKKIGAGLNFNAVLTTSNMIYTWGNNDKGQL 461

Query: 604 G 604
           G
Sbjct: 462 G 462



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 124/276 (44%), Gaps = 28/276 (10%)

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKV---SGQMEGLQISSICCGPWHTAAITSAGKLF 425
            Y WG        LG+VS      P+ V     Q  G  +S++  G      +T  G ++
Sbjct: 191 FYQWGQMFTTQLSLGKVST-----PQTVLFNHHQEHG--VSNVQFGGNFALMLTDTGMIY 243

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
           ++G  ++G LG   ++   +P ++  LK  +    +CG  H+ A+ E+            
Sbjct: 244 SWGLCSYGKLGQYSKNDCPIPSQIMELKNKQITQIACGKDHSLALDEIGC---------- 293

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCV-KVSDDISFCKVACGHSITIALTATGQVFSMG 544
             ++ WG+GA G+LG    +   +P  V    D +    +ACG   ++A+   G+VFS G
Sbjct: 294 --VYAWGNGAGGRLGLNKTDVVSLPTMVAHFPDQVKVVGIACGQDHSMAVCQDGRVFSWG 351

Query: 545 SADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
            A +G+LG  +P      P R+E        + ++CG++H   +++  +VY +G    G+
Sbjct: 352 QAGFGKLGYSNPMGFQSTPRRVESIPA---CKQVSCGNWHSLTLTNGGDVYAFGSNREGR 408

Query: 603 LGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G      +  P  V    + ++K +  G NF A +
Sbjct: 409 CGRELTTVESPPNRVIFDANIKIKKIGAGLNFNAVL 444



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 138/343 (40%), Gaps = 69/343 (20%)

Query: 241 SQGSCHED----FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
           +Q +C +D     D +G V+ WG G G G LG  +N  ++ S     A  P  ++     
Sbjct: 276 TQIACGKDHSLALDEIGCVYAWGNGAG-GRLG--LNKTDVVSLPTMVAHFPDQVKVV--- 329

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDALNGSNIHMVAC 355
               IACG  H++ V + G++FSWG+   GKLG+       S P+ ++++       V+C
Sbjct: 330 ---GIACGQDHSMAVCQDGRVFSWGQAGFGKLGYSNPMGFQSTPRRVESIPACK--QVSC 384

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
           G +H+  +T  GD+Y +G      G  G+        P +V      ++I  I  G    
Sbjct: 385 GNWHSLTLTNGGDVYAFGSNRE--GRCGRELTTVESPPNRVIFD-ANIKIKKIGAGLNFN 441

Query: 416 AAITSAGKLFTFGDGTFGALG----------------------------HGDRSSTSVPR 447
           A +T++  ++T+G+   G LG                              + + T VP+
Sbjct: 442 AVLTTSNMIYTWGNNDKGQLGVLIETKSNSTNNSRNNNNNNNYISVYAATLNDTYTYVPQ 501

Query: 448 EVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR 507
            V+TL          G  H   + + AG           ++ T+G     QLGHG+    
Sbjct: 502 LVKTLLPYPINNIEVGYEHVVVLTD-AG-----------EVITFGSNQMDQLGHGEL--- 546

Query: 508 VVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
                  + D  +F KV   +  T+   A G   S+ S   G 
Sbjct: 547 -------LRDAGTFRKVEIQNKSTVFKIAAGNYASLVSLSSGH 582



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 70/155 (45%), Gaps = 6/155 (3%)

Query: 488 LFTWGDGAEGQLGHGDAE-PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
            + WG     QL  G    P+ V         +S   V  G +  + LT TG ++S G  
Sbjct: 191 FYQWGQMFTTQLSLGKVSTPQTVLFNHHQEHGVS--NVQFGGNFALMLTDTGMIYSWGLC 248

Query: 547 DYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
            YG+LG         P++I   +K++ I  IACG  H   +     VY WG GA G+LG 
Sbjct: 249 SYGKLGQYSKNDCPIPSQIM-ELKNKQITQIACGKDHSLALDEIGCVYAWGNGAGGRLGL 307

Query: 606 GDNENKQTPTLVEALRDK-QVKSVVCGSNFTAAIC 639
              +    PT+V    D+ +V  + CG + + A+C
Sbjct: 308 NKTDVVSLPTMVAHFPDQVKVVGIACGQDHSMAVC 342


>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
           africana]
          Length = 551

 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 146/311 (46%), Gaps = 19/311 (6%)

Query: 291 ESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNI 350
           E  ++  A      S   +  T   +IF  G    G LG G       P+ +D+L+G  I
Sbjct: 41  ELQLIRQACVFGSASNEVLYTTVNNEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKI 100

Query: 351 HMVACGEF-HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
             ++ G   H    T  G+++TWG   ++   LG  +     +P  +S  +   Q+  + 
Sbjct: 101 ACLSYGSGPHIVLATTEGEVFTWGHNAYS--QLGNGTTNHGLVPCYISTNLSNKQVIEVA 158

Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE-TLKELKTVMASCGVWHTA 468
           CG +H+  +TS G++F +G    G +G G  ++  +PR V   L+    V  +CG   + 
Sbjct: 159 CGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCSM 218

Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH 528
           A+V+            + +++ WG    GQLG G +  +  P  V     I   +VACG+
Sbjct: 219 AVVD------------AGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGY 266

Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVS 587
           + T+ LT  GQV++ G+  YGQLG+   + + +PT I    K R IE  AC S H +   
Sbjct: 267 AHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPISVE-KDRIIEIAACHSTHTSAAK 325

Query: 588 SK-SEVYTWGK 597
           ++   VY WG+
Sbjct: 326 TQGGNVYMWGQ 336



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 110/225 (48%), Gaps = 19/225 (8%)

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
           T   ++F  G    G LG GD  ST  PR +++L   K    S G      +    G+  
Sbjct: 62  TVNNEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGE-- 119

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS---FCKVACGHSITIALT 535
                    +FTWG  A  QLG+G     +VP    +S ++S     +VACG   ++ LT
Sbjct: 120 ---------VFTWGHNAYSQLGNGTTNHGLVP--CYISTNLSNKQVIEVACGSYHSLVLT 168

Query: 536 ATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
           + G+VF+ G  + GQ+GS GST     P R+ G ++++ + +IACG      V    EVY
Sbjct: 169 SDGEVFAWGYNNSGQVGS-GSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVY 227

Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            WG   NGQLG G + N+ TP  V AL+   V+ V CG   T  +
Sbjct: 228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVL 272



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 25/272 (9%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGS----KHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           D +  + P+ L+S   L  + IAC S     H VL T +G++F+WG  +  +LG+G    
Sbjct: 82  DVQSTIEPRRLDS---LSGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNH 138

Query: 336 VSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
              P  I   L+   +  VACG +H+  +T  G+++ WG   +N G +G  S  +  IPR
Sbjct: 139 GLVPCYISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG--YNNSGQVGSGSTANQPIPR 196

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           +V+G ++   + +I CG   + A+  AG+++ +G    G LG G   +   P  V  L+ 
Sbjct: 197 RVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
           +     +CG  HT  + +              +++ WG  + GQLG G+   +  P  + 
Sbjct: 257 IHVQRVACGYAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSYPTPIS 304

Query: 515 VSDDISFCKVACGHS--ITIALTATGQVFSMG 544
           V  D    ++A  HS   + A T  G V+  G
Sbjct: 305 VEKD-RIIEIAACHSTHTSAAKTQGGNVYMWG 335



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 117/234 (50%), Gaps = 25/234 (10%)

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAA 469
           GP H    T+ G++FT+G   +  LG+G  +   VP  + T L   + +  +CG +H+  
Sbjct: 108 GP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCYISTNLSNKQVIEVACGSYHSLV 166

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVA 525
           +             S  ++F WG    GQ+G G       PR V  C++   + +   +A
Sbjct: 167 LT------------SDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQ---NKAVVNIA 211

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHI 583
           CG   ++A+   G+V+  G    GQLG  GS+G  PT  R+   ++  +++ +ACG  H 
Sbjct: 212 CGQMCSMAVVDAGEVYVWGYNGNGQLGL-GSSGNQPTPCRVAA-LQGIHVQRVACGYAHT 269

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            V++ + +VY WG  + GQLG G+  N+  PT +   +D+ ++   C S  T+A
Sbjct: 270 LVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPISVEKDRIIEIAACHSTHTSA 323



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 21/181 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK----VLESTVVLDAQSIACGSKHA 308
           G+VF WG            N  ++ S    +  +P+     L++  V++   IACG   +
Sbjct: 171 GEVFAWGYN----------NSGQVGSGSTANQPIPRRVTGCLQNKAVVN---IACGQMCS 217

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           + V   G+++ WG    G+LG G   +   P  + AL G ++  VACG  HT  +T  G 
Sbjct: 218 MAVVDAGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQ 277

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT-AAITSAGKLFTF 427
           +Y W  G ++ G LG  ++ +   P  +S + + + I    C   HT AA T  G ++ +
Sbjct: 278 VYAW--GANSYGQLGTGNKSNQSYPTPISVEKDRI-IEIAACHSTHTSAAKTQGGNVYMW 334

Query: 428 G 428
           G
Sbjct: 335 G 335


>gi|156361074|ref|XP_001625345.1| predicted protein [Nematostella vectensis]
 gi|156212175|gb|EDO33245.1| predicted protein [Nematostella vectensis]
          Length = 440

 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 178/382 (46%), Gaps = 43/382 (11%)

Query: 262 LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWG 321
           LG G +G    G+   + +R+   +P  LE   ++  +S   G  H V ++K G++++WG
Sbjct: 50  LGQGDVGQL--GLGPDTLERKKPAVPIDLEGVPIVQVES---GGMHTVALSKDGKVYTWG 104

Query: 322 EGSGGKLGHGV--EADVSY-PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN 378
               G LG     E +  + P ++   +  NI MV+ G+ HT A++  G +Y WG     
Sbjct: 105 CNDDGALGRETTSEGEEEFQPGVVSMPDDVNIVMVSAGDSHTAALSDQGTVYAWGTYRDA 164

Query: 379 LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH- 437
            G +G   +     P  +    E  +I  I  G  HTAA+T++G LFT G    G LG  
Sbjct: 165 SGQIGLQPDGVKKKPAVIL-TSESDRIIKIASGNDHTAALTTSGNLFTLGCAEQGQLGRV 223

Query: 438 --------GDRSSTSV--PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
                   G R    +  P  V + K LK     CG + T  + +     +GS+      
Sbjct: 224 KECFSARGGRRGLAYILEPALVRSKKGLKFKDVFCGSFATFVVAK-----TGSD------ 272

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKV------SDDISFCKVACGHSITIALTATGQVF 541
           ++ WG    GQLG GD +    P+ VK       S+      +A G   TI     G+V+
Sbjct: 273 VYAWGLNNYGQLGTGDVQTWHFPVKVKSLSQLNKSEKDKHITIANGQHHTIVCDPNGKVY 332

Query: 542 SMGSADYGQLGSPGSTGK---FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           ++G ADYG+LG  G   K    P  I  ++ +  IE +ACG      VS K E+Y+WG G
Sbjct: 333 ALGRADYGRLGL-GDGAKETALPAHIT-SLDNEVIEKVACGECVSFAVSDKGELYSWGMG 390

Query: 599 ANGQLGHGDNENK-QTPTLVEA 619
           +  QLG+G++E+   TP  V+ 
Sbjct: 391 SCLQLGNGNDEDDVTTPAKVQG 412



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 133/302 (44%), Gaps = 51/302 (16%)

Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
           SG   T G G  ++G LG   +        V   +EG+ I  +  G  HT A++  GK++
Sbjct: 44  SGQALTLGQG--DVGQLGLGPDTLERKKPAVPIDLEGVPIVQVESGGMHTVALSKDGKVY 101

Query: 426 TFGDGTFGALGHGDRSSTS------VPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
           T+G    GALG   R +TS       P  V    ++  VM S G  HTAA+ +       
Sbjct: 102 TWGCNDDGALG---RETTSEGEEEFQPGVVSMPDDVNIVMVSAGDSHTAALSD------- 151

Query: 480 SNGLSSKKLFTWGD--GAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
                   ++ WG    A GQ+G      +  P  +  S+     K+A G+  T ALT +
Sbjct: 152 -----QGTVYAWGTYRDASGQIGLQPDGVKKKPAVILTSESDRIIKIASGNDHTAALTTS 206

Query: 538 GQVFSMGSADYGQLG-------SPGSTGKFPTRIEGNI----KHRYIEDIACGSYHIAVV 586
           G +F++G A+ GQLG       + G        +E  +    K    +D+ CGS+   VV
Sbjct: 207 GNLFTLGCAEQGQLGRVKECFSARGGRRGLAYILEPALVRSKKGLKFKDVFCGSFATFVV 266

Query: 587 S-SKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL-------RDKQV-------KSVVCG 631
           + + S+VY WG    GQLG GD +    P  V++L       +DK +        ++VC 
Sbjct: 267 AKTGSDVYAWGLNNYGQLGTGDVQTWHFPVKVKSLSQLNKSEKDKHITIANGQHHTIVCD 326

Query: 632 SN 633
            N
Sbjct: 327 PN 328



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 21/218 (9%)

Query: 483 LSSKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
           L S +  T G G  GQLG G D   R  P      + +   +V  G   T+AL+  G+V+
Sbjct: 42  LESGQALTLGQGDVGQLGLGPDTLERKKPAVPIDLEGVPIVQVESGGMHTVALSKDGKVY 101

Query: 542 SMGSADYGQLGSPGSTG---KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG-- 596
           + G  D G LG   ++    +F   +        I  ++ G  H A +S +  VY WG  
Sbjct: 102 TWGCNDDGALGRETTSEGEEEFQPGVVSMPDDVNIVMVSAGDSHTAALSDQGTVYAWGTY 161

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCR 656
           + A+GQ+G   +  K+ P ++      ++  +  G++ TAA+      + + +    GC 
Sbjct: 162 RDASGQIGLQPDGVKKKPAVILTSESDRIIKIASGNDHTAAL------TTSGNLFTLGCA 215

Query: 657 NQFNFRRRRHNCYNC-----GLVYC---KLCSSKKSMK 686
            Q    R +  C++      GL Y     L  SKK +K
Sbjct: 216 EQGQLGRVKE-CFSARGGRRGLAYILEPALVRSKKGLK 252


>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
          Length = 1024

 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 117/217 (53%), Gaps = 15/217 (6%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFH 359
           I CG  H++ ++K G++F+WG+   G+LG G +    + P++++ L G  +  ++ GE H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           + A+++SG++Y+WG   +  G LG     S   P  +   ++  ++  + CG  H+A +T
Sbjct: 203 SMALSMSGNIYSWGK--NEFGQLGLGHTESKDYPSLIEA-LDNQEVEFLACGGSHSALLT 259

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G LFTFG G  G LGH    +   P  V  L   +    +CG WHT A V   G    
Sbjct: 260 QDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLAYVSDLG---- 315

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
                  K+F++G G +GQLG+G    +++PL VKVS
Sbjct: 316 -------KVFSFGSGKDGQLGNGGTRDQLIPLPVKVS 345



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 91/365 (24%), Positives = 158/365 (43%), Gaps = 34/365 (9%)

Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
           GGAV  V         A  PK ++    +   S+  G++H ++++  G+ F +   S   
Sbjct: 69  GGAVVQVHQLLPGSGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKH 128

Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
           L           +    L    I  + CG++H+ A++  G+L+ WG  +H  G LG   +
Sbjct: 129 L-----------RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRK 175

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPR 447
                  ++   + G+ ++ I  G  H+ A++ +G ++++G   FG LG G   S   P 
Sbjct: 176 FPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPS 235

Query: 448 EVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR 507
            +E L   +    +CG  H+A + +        +GL    LFT+G G  GQLGH   +  
Sbjct: 236 LIEALDNQEVEFLACGGSHSALLTQ--------DGL----LFTFGAGKHGQLGHNSTQNE 283

Query: 508 VVPLCVKVSDDISFCKVACGHSITIALTA-TGQVFSMGSADYGQLGSPGSTGK---FPTR 563
           + P  V         ++ACG   T+A  +  G+VFS GS   GQLG+ G+  +    P +
Sbjct: 284 LRPCLVAELVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLIPLPVK 343

Query: 564 IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDK 623
           +  + + + +E        I +      +  W K  N  +    N  +  PTL E    +
Sbjct: 344 VSSSEELK-LETHTSEKELIMIAGGNQSILLWIKKENSYV----NLKRTIPTLNEGTVRR 398

Query: 624 QVKSV 628
            +  V
Sbjct: 399 WIADV 403



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 106/200 (53%), Gaps = 13/200 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++F WG+ L +G LG    G +  S        P+++E    +    I+ G  H++ ++
Sbjct: 157 GELFAWGQNL-HGQLGV---GRKFPSTTT-----PQIVEHLAGVPLAQISAGEAHSMALS 207

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G I+SWG+   G+LG G      YP LI+AL+   +  +ACG  H+  +T  G L+T+
Sbjct: 208 MSGNIYSWGKNEFGQLGLGHTESKDYPSLIEALDNQEVEFLACGGSHSALLTQDGLLFTF 267

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           G G H  G LG  S  +   P  V+ ++ G +++ I CG WHT A ++  GK+F+FG G 
Sbjct: 268 GAGKH--GQLGHNSTQNELRPCLVA-ELVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324

Query: 432 FGALGHGDRSSTSVPREVET 451
            G LG+G      +P  V+ 
Sbjct: 325 DGQLGNGGTRDQLIPLPVKV 344



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 117/239 (48%), Gaps = 26/239 (10%)

Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
           + ++I S+  G  H   ++S GK F +           D  S    R    L+E K +  
Sbjct: 95  KNMKIHSVDQGAEHMLILSSDGKPFEY-----------DNYSMKHLRFESILQEKKIIQI 143

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP-RVVPLCVKVSDDI 519
           +CG +H+ A+         S G    +LF WG    GQLG G   P    P  V+    +
Sbjct: 144 TCGDYHSLAL---------SKG---GELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV 191

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIAC 578
              +++ G + ++AL+ +G ++S G  ++GQLG   +  K +P+ IE  + ++ +E +AC
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEA-LDNQEVEFLAC 250

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           G  H A+++    ++T+G G +GQLGH   +N+  P LV  L   +V  + CG   T A
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWHTLA 309



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 7/120 (5%)

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY----IEDIAC 578
           ++ CG   ++AL+  G++F+ G   +GQLG      KFP+     I        +  I+ 
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGV---GRKFPSTTTPQIVEHLAGVPLAQISA 198

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G  H   +S    +Y+WGK   GQLG G  E+K  P+L+EAL +++V+ + CG + +A +
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEALDNQEVEFLACGGSHSALL 258


>gi|74002225|ref|XP_851549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Canis lupus
           familiaris]
          Length = 1015

 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 169/349 (48%), Gaps = 28/349 (8%)

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
           ++ +  A G +H++L+   GQ+ S G+   G+LG       +  K I AL   ++ +V+C
Sbjct: 23  VELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKRIRALETLHVDLVSC 82

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
           G+ H+ AV   G ++ WG G       G+  E ++ IP K+   +  ++I  + CG +H+
Sbjct: 83  GKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKE-TNLIPMKIK-TLNDIKIKQVSCGHYHS 140

Query: 416 AAITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            A++  G++F++G  + G LG G +  S + P+ V +L  +     + G  H+ A+    
Sbjct: 141 LALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFAL---- 196

Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLG---HGDAEPRVVPLCVKVSDDISFCKVACGHSIT 531
              SG++       F WG    GQL    +  +     P  +    ++    ++CG+  T
Sbjct: 197 -SLSGTS-------FGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYEHT 248

Query: 532 IALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSK 589
           + LT  G+VF+ G   YGQLG SP +    P  +EG      +  I CGSYH +A V + 
Sbjct: 249 VVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEG--IDGLVSQIDCGSYHTLAYVYTT 306

Query: 590 SEVYTWGKGANGQLG--HGD--NENKQTPTLVEA--LRDKQVKSVVCGS 632
            +V ++G+    +    H +   EN     L+ A  L D QVK +  G+
Sbjct: 307 GKVVSFGREPTCKSSPTHPEALTENVDFTCLISADDLVDFQVKHIFAGT 355



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 129/263 (49%), Gaps = 28/263 (10%)

Query: 222 RSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADR 281
           R    ++  + L S     S   CH+     G VF WG G   G LG        +   +
Sbjct: 68  RIRALETLHVDLVSCGKEHSLAVCHK-----GRVFAWGAG-SEGQLG--------TGEFK 113

Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPK 340
              L+P  +++   +  + ++CG  H++ +++ GQ+FSWG  S G+LG G +    + P+
Sbjct: 114 ETNLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVFSWGSNSDGQLGLGKKFPSQASPQ 173

Query: 341 LIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD------GIHNLGLLGQVSEISHWIPR 394
            + +L+G  +  VA G  H+ A++LSG  + WG        +H   + GQ      + P 
Sbjct: 174 RVRSLDGIPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQ-----SYKPY 228

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
            +S  ++ L +  I CG  HT  +T  GK+FTFGD T+G LGH   +  S P+ VE +  
Sbjct: 229 SISA-LKNLGVIYISCGYEHTVVLTQNGKVFTFGDNTYGQLGHSPTAEKSGPQLVEGIDG 287

Query: 455 LKTVMASCGVWHTAAIVEVAGKT 477
           L + +  CG +HT A V   GK 
Sbjct: 288 LVSQI-DCGSYHTLAYVYTTGKV 309



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 133/265 (50%), Gaps = 26/265 (9%)

Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDALN 346
           K + +   L    ++CG +H++ V  +G++F+WG GS G+LG G   + +  P  I  LN
Sbjct: 67  KRIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLN 126

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWG---DGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
              I  V+CG +H+ A++  G +++WG   DG   LGL  +    S   P++V   ++G+
Sbjct: 127 DIKIKQVSCGHYHSLALSEGGQVFSWGSNSDG--QLGLGKKFP--SQASPQRVRS-LDGI 181

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALG-HGDRSS--TSVPREVETLKELKTVMA 460
            ++ +  G  H+ A++ +G  F +G    G L  H +  S  +  P  +  LK L  +  
Sbjct: 182 PLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYI 241

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
           SCG  HT  + +        NG    K+FT+GD   GQLGH     +  P  V+  D + 
Sbjct: 242 SCGYEHTVVLTQ--------NG----KVFTFGDNTYGQLGHSPTAEKSGPQLVEGIDGL- 288

Query: 521 FCKVACGHSITIA-LTATGQVFSMG 544
             ++ CG   T+A +  TG+V S G
Sbjct: 289 VSQIDCGSYHTLAYVYTTGKVVSFG 313



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 118/245 (48%), Gaps = 23/245 (9%)

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G+++     G  H+  + S G++ + GD   G LG      ++  + +  L+ L   + S
Sbjct: 22  GVELRQAASGERHSLLLLSNGQVHSCGDNGRGQLGQRGAPCSAQLKRIRALETLHVDLVS 81

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVPLCVKVSDDIS 520
           CG  H+ A+                ++F WG G+EGQLG G+  E  ++P+ +K  +DI 
Sbjct: 82  CGKEHSLAVCH------------KGRVFAWGAGSEGQLGTGEFKETNLIPMKIKTLNDIK 129

Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEG----NIKHRYIEDI 576
             +V+CGH  ++AL+  GQVFS GS   GQL   G   KFP++       ++    +  +
Sbjct: 130 IKQVSCGHYHSLALSEGGQVFSWGSNSDGQL---GLGKKFPSQASPQRVRSLDGIPLAQV 186

Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLG-HGDNENKQT--PTLVEALRDKQVKSVVCGSN 633
           A G  H   +S     + WG+   GQL  H +N + Q+  P  + AL++  V  + CG  
Sbjct: 187 AAGGAHSFALSLSGTSFGWGRNNAGQLALHKNNVSGQSYKPYSISALKNLGVIYISCGYE 246

Query: 634 FTAAI 638
            T  +
Sbjct: 247 HTVVL 251


>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
          Length = 395

 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 182/407 (44%), Gaps = 53/407 (13%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           V  WG G  +G LG  + G E     R  A L  +  S VV        GS++++ +   
Sbjct: 13  VLAWGSGE-DGQLG--MGGYEEEDWARGVAALDALAVSAVV-------AGSRNSLAICAD 62

Query: 315 GQIFSWGEGSGGKLGHGVEADV-SYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           G++F+WG    G LGH  E    S P  +DAL G +I   A G +H  AV   G  Y WG
Sbjct: 63  GRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGGWHCLAVDDKGRAYAWG 122

Query: 374 DGIHNLGLLGQVSEISHWIPRKV-------SGQMEGLQISSICCGPWHTAAITSAGKLFT 426
              +  G  G+ +E      R +        G    L++  +  G  H+  +T  G ++T
Sbjct: 123 G--NEYGQCGEEAERKEDGTRALRRDIPIPQGCAPKLKVRQVAAGGTHSVVLTQDGHVWT 180

Query: 427 FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
           +G         GD    S P  V+ L+ +K +  + G +H  A+ E        +G+   
Sbjct: 181 WGQ----PWPPGDIKQISTPVRVQGLENVKVI--AVGAFHNLALTE--------DGI--- 223

Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
            L+ WG+   GQLG GD +PR  P+ V+   D+S   +A G   + ALT  G+V++ G  
Sbjct: 224 -LWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRG 282

Query: 547 DYGQL--GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
           ++G+L  G   S+   P ++E  +    I  ++CG  H   ++    ++++G+G +G+LG
Sbjct: 283 EHGRLGFGDDKSSHMVPQKVE-LLAGEDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLG 341

Query: 605 HGDNENKQTPTLV------------EALRDKQVKSVVCGSNFTAAIC 639
           +G       P  V            ++    Q + V CG   T AI 
Sbjct: 342 YGRKVTTGHPMEVPIDLPPPGTSGGDSGGQWQARYVACGGRHTLAIA 388


>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
 gi|194702086|gb|ACF85127.1| unknown [Zea mays]
 gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 1 [Zea mays]
 gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
           isoform 2 [Zea mays]
          Length = 389

 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 183/407 (44%), Gaps = 56/407 (13%)

Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
           V  WG G  +G LG   N       + +D   P  +E+       ++  GS++++ +   
Sbjct: 10  VLAWGSGE-DGQLGMGGN-------EEKD--WPHFVEALGPYAVTAVVAGSRNSLAICDD 59

Query: 315 GQIFSWGEGSGGKLGHGVEADV-SYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           G++F+WG    G LGH  E    S P  +DAL G  I   A G +H  AV   G  Y WG
Sbjct: 60  GRLFTWGWNQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGGWHCLAVDDKGRAYAWG 119

Query: 374 DGIHNLGLLGQVSEISH----------WIPRKVSGQMEGLQISSICCGPWHTAAITSAGK 423
              +  G  G+  E              IP++ + +   L++  +  G  H+  +T  G 
Sbjct: 120 G--NEYGQCGEEPERKEDGTRALRRDIPIPQRCALK---LKVRQVAAGGTHSVVLTQEGH 174

Query: 424 LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
           ++T+G         GD    S P  V+ L++++ +  + G +H  A+ E           
Sbjct: 175 VWTWGQ----PWPPGDIKQISTPVRVQGLEKVRVI--AVGAFHNLALTE----------- 217

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
               L+ WG+   GQLG GD +PR  P+ V+   D+S   +A G   + ALT  G+V++ 
Sbjct: 218 -DVILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTIDGEVYAW 276

Query: 544 GSADYGQL--GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           G  ++G+L  G   S+   P ++E  +    I  ++CG  H   ++    ++++G+G +G
Sbjct: 277 GRGEHGRLGFGDDKSSHMVPLKVE-LLAGEDIVQVSCGGTHSVALARDGRMFSYGRGDHG 335

Query: 602 QLGHG----DNENKQTPTLVEAL---RDK--QVKSVVCGSNFTAAIC 639
           +LG+G         + P  +  L   RD   Q K V CG   T AI 
Sbjct: 336 RLGYGRKVTTGHPMELPINLPPLSSSRDGRWQAKYVACGGRHTLAIA 382



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 111/250 (44%), Gaps = 37/250 (14%)

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSST-SVPREVETLKELKTVMASCG 463
           ++++  G  ++ AI   G+LFT+G    G LGH   + T S P  V+ L   K V A+ G
Sbjct: 43  VTAVVAGSRNSLAICDDGRLFTWGWNQRGTLGHPPETKTESSPGPVDALAGFKIVQAAIG 102

Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP-----------RVVPLC 512
            WH  A+ +              + + WG    GQ G    EP           R +P+ 
Sbjct: 103 GWHCLAVDD------------KGRAYAWGGNEYGQCGE---EPERKEDGTRALRRDIPIP 147

Query: 513 VKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKH 570
            + +  +   +VA G + ++ LT  G V++     +GQ   PG   +   P R++G  K 
Sbjct: 148 QRCALKLKVRQVAAGGTHSVVLTQEGHVWT-----WGQPWPPGDIKQISTPVRVQGLEKV 202

Query: 571 RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
           R I   A G++H   ++    ++ WG    GQLG GD + +  P  VE L D  +  +  
Sbjct: 203 RVI---AVGAFHNLALTEDVILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAA 259

Query: 631 GSNFTAAICL 640
           G   + A+ +
Sbjct: 260 GGWHSTALTI 269



 Score = 53.5 bits (127), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 6/141 (4%)

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
           L +  +  WG G +GQLG G  E +  P  V+     +   V  G   ++A+   G++F+
Sbjct: 5   LRATAVLAWGSGEDGQLGMGGNEEKDWPHFVEALGPYAVTAVVAGSRNSLAICDDGRLFT 64

Query: 543 MGSADYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
            G    G LG P  T     P  ++     + ++  A G +H   V  K   Y WG    
Sbjct: 65  WGWNQRGTLGHPPETKTESSPGPVDALAGFKIVQ-AAIGGWHCLAVDDKGRAYAWGGNEY 123

Query: 601 GQLGHGDNENKQTPTLVEALR 621
           GQ G  + E K+  T   ALR
Sbjct: 124 GQCGE-EPERKEDGT--RALR 141


>gi|8778856|gb|AAF79855.1|AC000348_8 T7N9.12 [Arabidopsis thaliana]
          Length = 441

 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 196/465 (42%), Gaps = 102/465 (21%)

Query: 240 SSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQ 299
           +  G    D +    V+ WG G  +G LG         +   +D LLP++L  T +    
Sbjct: 2   AEHGETQADEEEEEQVWSWGAGT-DGQLG---------TTKLQDELLPQLLSLTSLPSIS 51

Query: 300 SIACGSKHAVLVTKQ---------------------------GQIFSWGEGSGGKLGHGV 332
            +ACG  H + +T                             G++F+WG GS G+LGHG 
Sbjct: 52  MLACGGAHVIALTSGKPPKISLIKGMLLVLVQVNILIMLFAGGKVFTWGRGSSGQLGHGD 111

Query: 333 EADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI 392
             +++ PKL+   + S I   A G  H+  V+ SG ++T G+G  + G LG    +S   
Sbjct: 112 ILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNG--SFGQLGHGDTLSLST 169

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH-GDR-SSTSVPREVE 450
           P KVS       +  + CG  H+  + +  ++  FG G  G LG   DR  S ++P  V 
Sbjct: 170 PAKVS-HFNNDSVKMVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVS 228

Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
            LK+++ V  S    H+AAI             +  + F+WG G  G  G     P+ +P
Sbjct: 229 GLKDVEVVRISANGDHSAAIS------------ADGQFFSWGRGFCG--GPDVHAPQSLP 274

Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA-----DYGQLGSPGSTGKFPTRIE 565
                   +SF +VA G +  + LT  G+VF +GS      +  QL    S   F    +
Sbjct: 275 ------SPLSFREVAVGWNHALLLTVDGEVFKLGSTLNKQPEKQQLQIDSSEALFEKVPD 328

Query: 566 GNIKHRYIEDIACGSYHIAVVSSK----------------------------SEVYTWGK 597
                  +  IA G+ H A V+ K                             EV TWG 
Sbjct: 329 --FDGVKVMQIAAGAEHSAAVTGKRGGAILLFLSSLHSANIKQTTFECLAENGEVKTWGW 386

Query: 598 GANGQLGHGDNENKQTPTLVEA----LRDKQVKSVVCGSNFTAAI 638
           G +GQLG G+  ++ +P LV      LR K++K V CGS FT A+
Sbjct: 387 GEHGQLGLGNTNDQTSPELVSLGSIDLRTKEIK-VYCGSGFTYAV 430


>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
           paniscus]
 gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
           [Gorilla gorilla gorilla]
 gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
          Length = 556

 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 23/314 (7%)

Query: 291 ESTVVLDAQSIACGS--KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
           E  + L  Q+   GS     +  T   +IF  G    G LG G       P+ +D+LNG 
Sbjct: 44  EEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGK 103

Query: 349 NIHMVACGEF-HTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQIS 406
            I  ++ G   H    T  G+++TWG   HN    LG  +     +P  +S  +   Q+ 
Sbjct: 104 KIACLSYGSGPHIVLATTEGEVFTWG---HNAYSQLGNGTTNHGLVPCHISTNLSNKQVI 160

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVW 465
            + CG +H+  +TS G++F +G    G +G G   +  +PR V    + K V+  +CG  
Sbjct: 161 EVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQM 220

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
              A+V+            + +++ WG    GQLG G++  +  P  V     I   +VA
Sbjct: 221 CCMAVVD------------TGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVA 268

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIA 584
           CG++ T+ LT  GQV++ G+  YGQLG+   + + +PT +    K R IE  AC S H +
Sbjct: 269 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE-KDRIIEIAACHSTHTS 327

Query: 585 VVSSK-SEVYTWGK 597
              ++   VY WG+
Sbjct: 328 AAKTQGGHVYMWGQ 341



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 109/220 (49%), Gaps = 17/220 (7%)

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           ++F  G    G LG GD  ST  PR +++L   K    S G      +    G+      
Sbjct: 71  EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGE------ 124

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS---FCKVACGHSITIALTATGQ 539
                +FTWG  A  QLG+G     +VP    +S ++S     +VACG   ++ LT+ G+
Sbjct: 125 -----VFTWGHNAYSQLGNGTTNHGLVP--CHISTNLSNKQVIEVACGSYHSLVLTSDGE 177

Query: 540 VFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           VF+ G  + GQ+GS  +  +  P R+ G ++++ +  IACG      V    EVY WG  
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 237

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            NGQLG G++ N+ TP  V AL+  +V+ V CG   T  +
Sbjct: 238 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 277



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 131/272 (48%), Gaps = 25/272 (9%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGS----KHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           D +  + P+ L+S   L+ + IAC S     H VL T +G++F+WG  +  +LG+G    
Sbjct: 87  DVQSTIEPRRLDS---LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNH 143

Query: 336 VSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
              P  I   L+   +  VACG +H+  +T  G+++ WG   +N G +G  S ++  IPR
Sbjct: 144 GLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG--YNNSGQVGSGSTVNQPIPR 201

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           +V+G ++   + +I CG     A+   G+++ +G    G LG G+  +   P  V  L+ 
Sbjct: 202 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 261

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
           ++    +CG  HT  + +              +++ WG  + GQLG G+   +  P  V 
Sbjct: 262 IRVQRVACGYAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSYPTPVT 309

Query: 515 VSDDISFCKVACGHS--ITIALTATGQVFSMG 544
           V  D    ++A  HS   + A T  G V+  G
Sbjct: 310 VEKD-RIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 25/234 (10%)

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAA 469
           GP H    T+ G++FT+G   +  LG+G  +   VP  + T L   + +  +CG +H+  
Sbjct: 113 GP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLV 171

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVA 525
           +             S  ++F WG    GQ+G G       PR V  C++    ++   +A
Sbjct: 172 LT------------SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT---IA 216

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHI 583
           CG    +A+  TG+V+  G    GQLG  G++G  PT  R+   ++   ++ +ACG  H 
Sbjct: 217 CGQMCCMAVVDTGEVYVWGYNGNGQLGL-GNSGNQPTPCRVAA-LQGIRVQRVACGYAHT 274

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            V++ + +VY WG  + GQLG G+  N+  PT V   +D+ ++   C S  T+A
Sbjct: 275 LVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 328



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 21/181 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK----VLESTVVLDAQSIACGSKHA 308
           G+VF WG            N  ++ S    +  +P+     L++ VV+   +IACG    
Sbjct: 176 GEVFAWGYN----------NSGQVGSGSTVNQPIPRRVTGCLQNKVVV---TIACGQMCC 222

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           + V   G+++ WG    G+LG G   +   P  + AL G  +  VACG  HT  +T  G 
Sbjct: 223 MAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 282

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT-AAITSAGKLFTF 427
           +Y W  G ++ G LG  ++ +   P  V+ + + + I    C   HT AA T  G ++ +
Sbjct: 283 VYAW--GANSYGQLGTGNKSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMW 339

Query: 428 G 428
           G
Sbjct: 340 G 340


>gi|444725178|gb|ELW65756.1| putative E3 ubiquitin-protein ligase HERC4 [Tupaia chinensis]
          Length = 870

 Score =  125 bits (313), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 111/215 (51%), Gaps = 15/215 (6%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDALNGSNIHMVACGEFH 359
           +ACG  H++ ++K  ++F WG+   G+LG G++    + P+LI +L G     VA G  H
Sbjct: 16  VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQVAAGGAH 75

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           +  +TLSG ++ WG   +  G LG   E   ++P  +   +   +I  ICCG  HTAA+T
Sbjct: 76  SFVLTLSGAIFGWGR--NKFGQLGLNDENDRYVPNLLKS-LRSQKIVYICCGEDHTAALT 132

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G +FTFG G +G LGH   S    PR+V  L        +CG  HT+A V        
Sbjct: 133 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP------- 185

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
               SS +++++G G  GQLG G    R  P  VK
Sbjct: 186 ----SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 216



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 107/221 (48%), Gaps = 14/221 (6%)

Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTV 458
           +  +QI  + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L  +  +
Sbjct: 8   LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFM 67

Query: 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD 518
             + G  H+  +       SG+       +F WG    GQLG  D   R VP  +K    
Sbjct: 68  QVAAGGAHSFVLT-----LSGA-------IFGWGRNKFGQLGLNDENDRYVPNLLKSLRS 115

Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIAC 578
                + CG   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +  IAC
Sbjct: 116 QKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIAC 175

Query: 579 GSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
           G  H  A V S   +Y++G G NGQLG G   N+++P  V+
Sbjct: 176 GRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 216



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  ++  + +S        P++++S + +    +A G  H+ ++T 
Sbjct: 31  EVFCWGQN-KYGQLGLGIDCKKQTS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 81

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D   P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 82  SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 141

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 142 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 198

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 199 GQLGTGSTSNRKSPFTVK 216



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 13/194 (6%)

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG-DAE 505
           R +++L +++ V  +CG +H+ A+ +            + ++F WG    GQLG G D +
Sbjct: 3   RNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQNKYGQLGLGIDCK 50

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIE 565
            +  P  +K    I F +VA G + +  LT +G +F  G   +GQLG      ++   + 
Sbjct: 51  KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 110

Query: 566 GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQV 625
            +++ + I  I CG  H A ++ +  V+T+G G  GQLGH    ++  P  V  L    V
Sbjct: 111 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 170

Query: 626 KSVVCGSNFTAAIC 639
             + CG   T+A  
Sbjct: 171 TQIACGRQHTSAFV 184



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 110/229 (48%), Gaps = 18/229 (7%)

Query: 342 IDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQME 401
           I +L+   I  VACG +H+ A++ + +++ WG   +  G LG   +       ++   + 
Sbjct: 5   IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQ--NKYGQLGLGIDCKKQTSPQLIKSLL 62

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G+    +  G  H+  +T +G +F +G   FG LG  D +   VP  +++L+  K V   
Sbjct: 63  GIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYIC 122

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
           CG  HTAA+ +  G            +FT+G G  GQLGH      + P  V        
Sbjct: 123 CGEDHTAALTKEGG------------VFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 170

Query: 522 CKVACGHSITIALT-ATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGN 567
            ++ACG   T A   ++G+++S G    GQLG+ GST   K P  ++GN
Sbjct: 171 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGT-GSTSNRKSPFTVKGN 218



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 3/134 (2%)

Query: 513 VKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKH 570
           +K   DI   +VACG+  ++AL+   +VF  G   YGQLG      K   P  I+  +  
Sbjct: 5   IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGI 64

Query: 571 RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
            +++ +A G  H  V++    ++ WG+   GQLG  D  ++  P L+++LR +++  + C
Sbjct: 65  PFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICC 123

Query: 631 GSNFTAAICLHKGV 644
           G + TAA+    GV
Sbjct: 124 GEDHTAALTKEGGV 137


>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
 gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           6
 gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
 gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
 gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
          Length = 1022

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 163/347 (46%), Gaps = 35/347 (10%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDA 344
           LP+ +++   L    ++CG +H++ V  +G++F+WG GS G+LG G   ++S+ PK I  
Sbjct: 65  LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT 124

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGL 403
           LN   I  V+CG +H+ A++    +++WG   H  G LG   E  S   P++V   +EG+
Sbjct: 125 LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQASPQRVRS-LEGI 181

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS---STSVPREVETLKELKTVMA 460
            ++ +  G  H+ A++  G  F +G  + G L    R+    ++ P  V  LK L  V  
Sbjct: 182 PLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYI 241

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
           SCG  HTA + +              K+FT+GD   GQLG+     +  P  V+  D + 
Sbjct: 242 SCGDAHTAVLTQ------------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL- 288

Query: 521 FCKVACGHSITIALT-ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
             ++ CG   T+A    TGQV S G         P  T K PT  E   ++    DI+C 
Sbjct: 289 VSQIDCGSYHTLAYVHTTGQVVSFGHG-------PSDTSK-PTHPEALTENF---DISCL 337

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP--TLVEALRDKQ 624
                 V  + +    G  AN    H D  + + P  TL E  R  Q
Sbjct: 338 ISAEDFVDVQVKHIFAGTYANFVTTHQDTSSTRAPGKTLPEISRISQ 384



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 168/351 (47%), Gaps = 36/351 (10%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G +H++L+    ++ S G+ S G+LG         P+ I AL    + +V+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSL 88

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV   G ++ WG G      +G+  EIS + P+K+   +  ++I  + CG +H+ A++  
Sbjct: 89  AVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIM-TLNDIKIIQVSCGHYHSLALSKD 146

Query: 422 GKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            ++F++G  + G LG G +  S + P+ V +L+ +     + G  H+ A+  + G +   
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-SLCGTS--- 202

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVV---PLCVKVSDDISFCKVACGHSITIALTAT 537
                   F WG  + GQL        V    PL V    ++    ++CG + T  LT  
Sbjct: 203 --------FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQD 254

Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPT---RIEGNIKHRYIEDIACGSYH-IAVVSSKSEV 592
           G+VF+ G    GQLG SP    + P    RI+G      +  I CGSYH +A V +  +V
Sbjct: 255 GKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQV 309

Query: 593 YTWGKGAN--GQLGHGD--NENKQTPTLVEA--LRDKQVKSVVCGS--NFT 635
            ++G G +   +  H +   EN     L+ A    D QVK +  G+  NF 
Sbjct: 310 VSFGHGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGTYANFV 360



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 117/257 (45%), Gaps = 27/257 (10%)

Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
           + R+ +    G ++     G  H+  + +  ++ + GD + G LG        +P  ++ 
Sbjct: 12  LQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA 71

Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVP 510
           L+ L   + SCG  H+ A+                ++F WG G+EGQLG G+  E    P
Sbjct: 72  LETLIVDLVSCGKEHSLAVCH------------KGRVFAWGAGSEGQLGIGEFKEISFTP 119

Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIK 569
             +   +DI   +V+CGH  ++AL+   QVFS G   +GQLG     GK FP++     +
Sbjct: 120 KKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG----LGKEFPSQASPQ-R 174

Query: 570 HRYIEDI-----ACGSYHIAVVSSKSEVYTWGKGANGQLG-HGDNENKQT--PTLVEALR 621
            R +E I     A G  H   +S     + WG  + GQL   G N   Q+  P  V AL+
Sbjct: 175 VRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALK 234

Query: 622 DKQVKSVVCGSNFTAAI 638
           +  V  + CG   TA +
Sbjct: 235 NLGVVYISCGDAHTAVL 251


>gi|440904418|gb|ELR54938.1| E3 ISG15--protein ligase HERC5, partial [Bos grunniens mutus]
          Length = 1009

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 119/214 (55%), Gaps = 21/214 (9%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGEFH 359
           I CG  H++ ++K G++F+WG+   G+LG G + A  S P++++ L+G  +  ++ GE H
Sbjct: 127 ITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGEAH 186

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTA 416
           + A+++SG++Y+WG   ++ G LG    + H   +     +E L   ++  + CG  HTA
Sbjct: 187 SMALSMSGNVYSWGR--NDCGQLG----LGHTYNKDSPSCIETLDDQKVEFLACGGCHTA 240

Query: 417 AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
            +T +G +FTFGDG +G LGH    +   PR V  L   +    +CG  HT A V   G 
Sbjct: 241 LLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTG- 299

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
                     K+F++G G EGQLG+G    +++P
Sbjct: 300 ----------KVFSFGSGKEGQLGNGGTRNQLIP 323



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 124/278 (44%), Gaps = 29/278 (10%)

Query: 339 PKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSG 398
           PK I       IH +  GE H   ++  G  + +   I +                +   
Sbjct: 73  PKCIKLGKKMKIHSMDQGEEHMLVLSSDGKPFEYKYSIEH---------------ARFQC 117

Query: 399 QMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGD-RSSTSVPREVETLKELKT 457
            ++   I  I CG +H+ A++  G+LF +G    G LG G   +STS P  VE L  +  
Sbjct: 118 ILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPL 177

Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
           V  S G  H+ A+       SG+       +++WG    GQLG G    +  P C++  D
Sbjct: 178 VQISAGEAHSMAL-----SMSGN-------VYSWGRNDCGQLGLGHTYNKDSPSCIETLD 225

Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIA 577
           D     +ACG   T  LT +G VF+ G   YGQLG   +  +   R+   +    +  IA
Sbjct: 226 DQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIA 285

Query: 578 CGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTP 614
           CG  H +A VS   +V+++G G  GQLG+G   N+  P
Sbjct: 286 CGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIP 323



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 108/196 (55%), Gaps = 13/196 (6%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G++F WG+ L +G LG  V  +  S++       P+++E+   +    I+ G  H++ ++
Sbjct: 141 GELFAWGQNL-DGQLG--VGRIFASTST------PEIVENLSGVPLVQISAGEAHSMALS 191

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G ++SWG    G+LG G   +   P  I+ L+   +  +ACG  HT  +T SG ++T+
Sbjct: 192 MSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGCHTALLTKSGLVFTF 251

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
           GDG +  G LG  S  +   PR V+G + G +++ I CG  HT A ++  GK+F+FG G 
Sbjct: 252 GDGKY--GQLGHNSTQNELRPRLVTG-LVGNRVTQIACGRQHTLAYVSDTGKVFSFGSGK 308

Query: 432 FGALGHGDRSSTSVPR 447
            G LG+G   +  +PR
Sbjct: 309 EGQLGNGGTRNQLIPR 324



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 111/237 (46%), Gaps = 27/237 (11%)

Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
           ++I S+  G  H   ++S GK F +            + S    R    L+E   +  +C
Sbjct: 82  MKIHSMDQGEEHMLVLSSDGKPFEY------------KYSIEHARFQCILQEKNIIQITC 129

Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISF 521
           G +H+ A+         S G    +LF WG   +GQLG G        P  V+    +  
Sbjct: 130 GDYHSLAL---------SKG---GELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPL 177

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
            +++ G + ++AL+ +G V+S G  D GQLG   +  K  P+ IE  +  + +E +ACG 
Sbjct: 178 VQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIE-TLDDQKVEFLACGG 236

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            H A+++    V+T+G G  GQLGH   +N+  P LV  L   +V  + CG   T A
Sbjct: 237 CHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLA 293



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 3/118 (2%)

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGS 580
           ++ CG   ++AL+  G++F+ G    GQLG     ++   P  +E N+    +  I+ G 
Sbjct: 126 QITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVE-NLSGVPLVQISAGE 184

Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            H   +S    VY+WG+   GQLG G   NK +P+ +E L D++V+ + CG   TA +
Sbjct: 185 AHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGCHTALL 242


>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Nomascus leucogenys]
          Length = 556

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 23/314 (7%)

Query: 291 ESTVVLDAQSIACGS--KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
           E  + L  Q+   GS     +  T   +IF  G    G LG G       P+ +D+LNG 
Sbjct: 44  EEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGK 103

Query: 349 NIHMVACGEF-HTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQIS 406
            I  ++ G   H    T  G+++TWG   HN    LG  +     +P  +S  +   Q+ 
Sbjct: 104 KIACLSYGSGPHIVLATTEGEVFTWG---HNAYSQLGNGTTNHGLVPCHISTNLSNKQVI 160

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVW 465
            + CG +H+  +TS G++F +G    G +G G   +  +PR V    + K V+  +CG  
Sbjct: 161 EVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQM 220

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
              A+V+            + +++ WG    GQLG G++  +  P  V     I   +VA
Sbjct: 221 CCMAVVD------------TGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVA 268

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIA 584
           CG++ T+ LT  GQV++ G+  YGQLG+   + + +PT +    K R IE  AC S H +
Sbjct: 269 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE-KDRIIEIAACHSTHTS 327

Query: 585 VVSSK-SEVYTWGK 597
              ++   VY WG+
Sbjct: 328 AAKTQGGHVYMWGQ 341



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 109/220 (49%), Gaps = 17/220 (7%)

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           ++F  G    G LG GD  ST  PR +++L   K    S G      +    G+      
Sbjct: 71  EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGE------ 124

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS---FCKVACGHSITIALTATGQ 539
                +FTWG  A  QLG+G     +VP    +S ++S     +VACG   ++ LT+ G+
Sbjct: 125 -----VFTWGHNAYSQLGNGTTNHGLVP--CHISTNLSNKQVIEVACGSYHSLVLTSDGE 177

Query: 540 VFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           VF+ G  + GQ+GS  +  +  P R+ G ++++ +  IACG      V    EVY WG  
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 237

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            NGQLG G++ N+ TP  V AL+  +V+ V CG   T  +
Sbjct: 238 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 277



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 131/272 (48%), Gaps = 25/272 (9%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGS----KHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           D +  + P+ L+S   L+ + IAC S     H VL T +G++F+WG  +  +LG+G    
Sbjct: 87  DVQSTIEPRRLDS---LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNH 143

Query: 336 VSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
              P  I   L+   +  VACG +H+  +T  G+++ WG   +N G +G  S ++  IPR
Sbjct: 144 GLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG--YNNSGQVGSGSTVNQPIPR 201

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           +V+G ++   + +I CG     A+   G+++ +G    G LG G+  +   P  V  L+ 
Sbjct: 202 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 261

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
           ++    +CG  HT  + +              +++ WG  + GQLG G+   +  P  V 
Sbjct: 262 IRVQRVACGYAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSYPTPVT 309

Query: 515 VSDDISFCKVACGHS--ITIALTATGQVFSMG 544
           V  D    ++A  HS   + A T  G V+  G
Sbjct: 310 VEKD-RIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 25/234 (10%)

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAA 469
           GP H    T+ G++FT+G   +  LG+G  +   VP  + T L   + +  +CG +H+  
Sbjct: 113 GP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLV 171

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVA 525
           +             S  ++F WG    GQ+G G       PR V  C++    ++   +A
Sbjct: 172 LT------------SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT---IA 216

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHI 583
           CG    +A+  TG+V+  G    GQLG  G++G  PT  R+   ++   ++ +ACG  H 
Sbjct: 217 CGQMCCMAVVDTGEVYVWGYNGNGQLGL-GNSGNQPTPCRVAA-LQGIRVQRVACGYAHT 274

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            V++ + +VY WG  + GQLG G+  N+  PT V   +D+ ++   C S  T+A
Sbjct: 275 LVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 328



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 21/181 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK----VLESTVVLDAQSIACGSKHA 308
           G+VF WG            N  ++ S    +  +P+     L++ VV+   +IACG    
Sbjct: 176 GEVFAWGYN----------NSGQVGSGSTVNQPIPRRVTGCLQNKVVV---TIACGQMCC 222

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           + V   G+++ WG    G+LG G   +   P  + AL G  +  VACG  HT  +T  G 
Sbjct: 223 MAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 282

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT-AAITSAGKLFTF 427
           +Y W  G ++ G LG  ++ +   P  V+ + + + I    C   HT AA T  G ++ +
Sbjct: 283 VYAW--GANSYGQLGTGNKSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMW 339

Query: 428 G 428
           G
Sbjct: 340 G 340


>gi|115471953|ref|NP_001059575.1| Os07g0459400 [Oryza sativa Japonica Group]
 gi|28564665|dbj|BAC57847.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113611111|dbj|BAF21489.1| Os07g0459400 [Oryza sativa Japonica Group]
 gi|215678781|dbj|BAG95218.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 484

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 150/337 (44%), Gaps = 24/337 (7%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGEF 358
           +I+    HA  VT+ G++F+ G+ S    GHG V   +  P  I AL G +   VA G  
Sbjct: 159 NISASHNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLS 218

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ-ISSICCGPWHTAA 417
            T  +T  G +YT G   H  G LG    I    P+ V    EGL  +  +  G  +T A
Sbjct: 219 FTVILTTDGQVYTCGSNTH--GQLGHGDTIDRATPKIVE-LFEGLAPVVQVAAGASYTFA 275

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAG 475
           +T  G +++FG  T   LGHGD+     PR +++ K   +  V  S G  H  A+  +  
Sbjct: 276 VTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALG- 334

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
                       ++TWG G  G LGHGD   +  P  +         +V      T  LT
Sbjct: 335 -----------YVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLT 383

Query: 536 ATGQVFSMGSADYGQLGSP--GSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
             G VF+ G   +G LG P  GS+ K    R+  +++  Y+  I+ G YH   V+++  V
Sbjct: 384 DEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRGIV 443

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVV 629
           + +G     QLG         PT  E +  K ++ +V
Sbjct: 444 FGFGDNERAQLGQEYIRGCLKPT--EIMFQKSMEEIV 478



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 106/221 (47%), Gaps = 17/221 (7%)

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIVE 472
           H A +T  G++FT GD +    GHG+   T   P E++ LK +     + G+  T  +  
Sbjct: 166 HAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILT- 224

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS-FCKVACGHSIT 531
                      +  +++T G    GQLGHGD   R  P  V++ + ++   +VA G S T
Sbjct: 225 -----------TDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYT 273

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHR--YIEDIACGSYHIAVVSSK 589
            A+T  G V+S GS     LG      +   R   + K R  ++  ++ G  H   + + 
Sbjct: 274 FAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDAL 333

Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
             VYTWG+G  G LGHGD  +K +P L+ +L+  QV   VC
Sbjct: 334 GYVYTWGRGYCGALGHGDENDKTSPELISSLK-SQVAVQVC 373



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 141/311 (45%), Gaps = 38/311 (12%)

Query: 252 LGDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
           LG+VF  G+      G+G +G             R    P  +++   +  + +A G   
Sbjct: 173 LGEVFTCGDNSSLCCGHGEVG-------------RTIFRPTEIKALKGISCKQVATGLSF 219

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG-SNIHMVACGEFHTCAVTLS 366
            V++T  GQ+++ G  + G+LGHG   D + PK+++   G + +  VA G  +T AVT  
Sbjct: 220 TVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTFAVTDD 279

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKV-SGQMEGLQISSICCGPWHTAAITSAGKLF 425
           G +Y++G   +    LG   +     PR + S +   + +  +  G  H  A+ + G ++
Sbjct: 280 GTVYSFGSCTNF--CLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVY 337

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
           T+G G  GALGHGD +  + P  + +LK             +   V+V  +   +  L+ 
Sbjct: 338 TWGRGYCGALGHGDENDKTSPELISSLK-------------SQVAVQVCARKRKTFVLTD 384

Query: 486 K-KLFTWGDGAEGQLG---HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
           +  +F +G    G LG    G ++  + P  +    D    +++ G   T+A+T  G VF
Sbjct: 385 EGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRGIVF 444

Query: 542 SMGSADYGQLG 552
             G  +  QLG
Sbjct: 445 GFGDNERAQLG 455



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 4/187 (2%)

Query: 276 ISSADRRDALLPKVLESTVV--LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
           +   D+ D L P+ ++S     +    ++ G +HAV +   G +++WG G  G LGHG E
Sbjct: 293 LGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDE 352

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWI 392
            D + P+LI +L       V   +  T  +T  G ++ +G  G  +LG   + S      
Sbjct: 353 NDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMR 412

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
           PR V   +    +S I  G +HT A+T+ G +F FGD     LG         P E+   
Sbjct: 413 PR-VLDSLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEIMFQ 471

Query: 453 KELKTVM 459
           K ++ ++
Sbjct: 472 KSMEEIV 478



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 16/224 (7%)

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWH 466
           +  G +HT  +  +  +++ G    G LGHG D +  +    V      + V  S    H
Sbjct: 108 VATGRYHTLLVHDS-SVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHNH 166

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV-PLCVKVSDDISFCKVA 525
            A + E+             ++FT GD +    GHG+    +  P  +K    IS  +VA
Sbjct: 167 AAFVTELG------------EVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVA 214

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIA 584
            G S T+ LT  GQV++ GS  +GQLG   +  +  P  +E       +  +A G+ +  
Sbjct: 215 TGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTF 274

Query: 585 VVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSV 628
            V+    VY++G   N  LGHGD  ++  P  +++ + + +  V
Sbjct: 275 AVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVV 318


>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
 gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
          Length = 986

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 163/347 (46%), Gaps = 35/347 (10%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDA 344
           LP+ +++   L    ++CG +H++ V  +G++F+WG GS G+LG G   ++S+ PK I  
Sbjct: 65  LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT 124

Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGL 403
           LN   I  V+CG +H+ A++    +++WG   H  G LG   E  S   P++V   +EG+
Sbjct: 125 LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQASPQRVRS-LEGI 181

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS---STSVPREVETLKELKTVMA 460
            ++ +  G  H+ A++  G  F +G  + G L    R+    ++ P  V  LK L  V  
Sbjct: 182 PLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYI 241

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
           SCG  HTA + +              K+FT+GD   GQLG+     +  P  V+  D + 
Sbjct: 242 SCGDAHTAVLTQ------------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL- 288

Query: 521 FCKVACGHSITIALT-ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
             ++ CG   T+A    TGQV S G         P  T K PT  E   ++    DI+C 
Sbjct: 289 VSQIDCGSYHTLAYVHTTGQVVSFGHG-------PSDTSK-PTHPEALTENF---DISCL 337

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP--TLVEALRDKQ 624
                 V  + +    G  AN    H D  + + P  TL E  R  Q
Sbjct: 338 ISAEDFVDVQVKHIFAGTYANFVTTHQDTSSTRAPGKTLPEISRISQ 384



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 168/351 (47%), Gaps = 36/351 (10%)

Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
           A G +H++L+    ++ S G+ S G+LG         P+ I AL    + +V+CG+ H+ 
Sbjct: 29  ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSL 88

Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
           AV   G ++ WG G      +G+  EIS + P+K+   +  ++I  + CG +H+ A++  
Sbjct: 89  AVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIM-TLNDIKIIQVSCGHYHSLALSKD 146

Query: 422 GKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            ++F++G  + G LG G +  S + P+ V +L+ +     + G  H+ A+  + G +   
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-SLCGTS--- 202

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVV---PLCVKVSDDISFCKVACGHSITIALTAT 537
                   F WG  + GQL        V    PL V    ++    ++CG + T  LT  
Sbjct: 203 --------FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQD 254

Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPT---RIEGNIKHRYIEDIACGSYH-IAVVSSKSEV 592
           G+VF+ G    GQLG SP    + P    RI+G      +  I CGSYH +A V +  +V
Sbjct: 255 GKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQV 309

Query: 593 YTWGKGAN--GQLGHGD--NENKQTPTLVEA--LRDKQVKSVVCGS--NFT 635
            ++G G +   +  H +   EN     L+ A    D QVK +  G+  NF 
Sbjct: 310 VSFGHGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGTYANFV 360



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 117/257 (45%), Gaps = 27/257 (10%)

Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
           + R+ +    G ++     G  H+  + +  ++ + GD + G LG        +P  ++ 
Sbjct: 12  LQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA 71

Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVP 510
           L+ L   + SCG  H+ A+                ++F WG G+EGQLG G+  E    P
Sbjct: 72  LETLIVDLVSCGKEHSLAVCH------------KGRVFAWGAGSEGQLGIGEFKEISFTP 119

Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIK 569
             +   +DI   +V+CGH  ++AL+   QVFS G   +GQLG     GK FP++     +
Sbjct: 120 KKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG----LGKEFPSQASPQ-R 174

Query: 570 HRYIEDI-----ACGSYHIAVVSSKSEVYTWGKGANGQLG-HGDNENKQT--PTLVEALR 621
            R +E I     A G  H   +S     + WG  + GQL   G N   Q+  P  V AL+
Sbjct: 175 VRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALK 234

Query: 622 DKQVKSVVCGSNFTAAI 638
           +  V  + CG   TA +
Sbjct: 235 NLGVVYISCGDAHTAVL 251


>gi|428184654|gb|EKX53509.1| hypothetical protein GUITHDRAFT_64398, partial [Guillardia theta
           CCMP2712]
          Length = 279

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 135/280 (48%), Gaps = 14/280 (5%)

Query: 319 SWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN 378
           SWG G    LGHG  A+  YPK I +L    +  VA G  H  A+  SG +Y+WG G++ 
Sbjct: 1   SWGTGFNLCLGHGSHANEKYPKPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGLNG 60

Query: 379 LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG 438
               G + + S   P+ ++   +      I CG  H+A +T  GKL+++G G  G LG+G
Sbjct: 61  RLGHGNIQDSS--APKMLASTKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGELGNG 118

Query: 439 DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQ 498
           +R     P  V  L++L     +CG   T A            GL    LF+WG G  G 
Sbjct: 119 ERHDQWTPNLVLRLRDLVVSYVACGTNTTFACT--------GGGL----LFSWGSGKHGC 166

Query: 499 LGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG 558
           LG GD E R+ P  V++ ++    +VACG    +ALT  G+++  G    G  G   ++ 
Sbjct: 167 LGLGDREDRLEPSLVRLREEDRIIRVACGEHHCLALTEDGKLWGWGRGTGGCHGLGHTSE 226

Query: 559 KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
                     + R I  ++CG +H A ++ + +++ +G G
Sbjct: 227 VLSPHKLPMPEDRTIVSMSCGRWHSAYLTIRGDIFCFGSG 266



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 122/261 (46%), Gaps = 16/261 (6%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           PK ++S        +A G +H   +   GQI+SWG G  G+LGHG   D S PK++ +  
Sbjct: 21  PKPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGLNGRLGHGNIQDSSAPKMLASTK 80

Query: 347 GSNIHM-VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
            +   + +ACG  H+  +T  G LY+WG G++  G LG       W P  V  ++  L +
Sbjct: 81  KNCTAVQIACGAAHSAYLTQDGKLYSWGRGLN--GELGNGERHDQWTPNLVL-RLRDLVV 137

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
           S + CG   T A T  G LF++G G  G LG GDR     P  V   +E + +  +CG  
Sbjct: 138 SYVACGTNTTFACTGGGLLFSWGSGKHGCLGLGDREDRLEPSLVRLREEDRIIRVACGEH 197

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
           H  A+ E              KL+ WG G  G  G G     + P  + + +D +   ++
Sbjct: 198 HCLALTE------------DGKLWGWGRGTGGCHGLGHTSEVLSPHKLPMPEDRTIVSMS 245

Query: 526 CGHSITIALTATGQVFSMGSA 546
           CG   +  LT  G +F  GS 
Sbjct: 246 CGRWHSAYLTIRGDIFCFGSG 266



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 130/273 (47%), Gaps = 24/273 (8%)

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           +WG G  NL  LG  S  +   P+ +    E   +  +  GP H +A+ S+G+++++G G
Sbjct: 1   SWGTGF-NL-CLGHGSHANEKYPKPIKSLKE-KGVIQVAVGPQHCSALCSSGQIYSWGIG 57

Query: 431 TFGALGHGDRSSTSVPREV-ETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
             G LGHG+   +S P+ +  T K    V  +CG  H+A + +              KL+
Sbjct: 58  LNGRLGHGNIQDSSAPKMLASTKKNCTAVQIACGAAHSAYLTQ------------DGKLY 105

Query: 490 TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
           +WG G  G+LG+G+   +  P  V    D+    VACG + T A T  G +FS GS  +G
Sbjct: 106 SWGRGLNGELGNGERHDQWTPNLVLRLRDLVVSYVACGTNTTFACTGGGLLFSWGSGKHG 165

Query: 550 QLGSPGSTGKFPTRIEGNIKHRYIED----IACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
            LG     G    R+E ++     ED    +ACG +H   ++   +++ WG+G  G  G 
Sbjct: 166 CLG----LGDREDRLEPSLVRLREEDRIIRVACGEHHCLALTEDGKLWGWGRGTGGCHGL 221

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G      +P  +    D+ + S+ CG   +A +
Sbjct: 222 GHTSEVLSPHKLPMPEDRTIVSMSCGRWHSAYL 254



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/178 (35%), Positives = 82/178 (46%), Gaps = 13/178 (7%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G ++ WG GL         NG E+ + +R D   P ++     L    +ACG+      T
Sbjct: 102 GKLYSWGRGL---------NG-ELGNGERHDQWTPNLVLRLRDLVVSYVACGTNTTFACT 151

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +FSWG G  G LG G   D   P L+       I  VACGE H  A+T  G L+ W
Sbjct: 152 GGGLLFSWGSGKHGCLGLGDREDRLEPSLVRLREEDRIIRVACGEHHCLALTEDGKLWGW 211

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
           G G      LG  SE+    P K+    E   I S+ CG WH+A +T  G +F FG G
Sbjct: 212 GRGTGGCHGLGHTSEVLS--PHKLP-MPEDRTIVSMSCGRWHSAYLTIRGDIFCFGSG 266



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 86/184 (46%), Gaps = 15/184 (8%)

Query: 490 TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
           +WG G    LGHG       P  +K   +    +VA G     AL ++GQ++S G    G
Sbjct: 1   SWGTGFNLCLGHGSHANEKYPKPIKSLKEKGVIQVAVGPQHCSALCSSGQIYSWGIGLNG 60

Query: 550 QLGSPG-STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           +LG         P  +    K+     IACG+ H A ++   ++Y+WG+G NG+LG+G+ 
Sbjct: 61  RLGHGNIQDSSAPKMLASTKKNCTAVQIACGAAHSAYLTQDGKLYSWGRGLNGELGNGER 120

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNC 668
            ++ TP LV  LRD  V  V CG+N T A              C+G    F++   +H C
Sbjct: 121 HDQWTPNLVLRLRDLVVSYVACGTNTTFA--------------CTGGGLLFSWGSGKHGC 166

Query: 669 YNCG 672
              G
Sbjct: 167 LGLG 170


>gi|375010994|ref|YP_004987982.1| Regulator of chromosome condensation (RCC1) repeat protein
           [Owenweeksia hongkongensis DSM 17368]
 gi|359346918|gb|AEV31337.1| Regulator of chromosome condensation (RCC1) repeat protein
           [Owenweeksia hongkongensis DSM 17368]
          Length = 440

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 158/324 (48%), Gaps = 32/324 (9%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           IA G  H++ + +QG++++WG  + G+LG  +  D + P+L+  +N  +   V  G +HT
Sbjct: 73  IARGYDHSLAIDEQGRVWAWGRNNYGQLGSAIPIDFNTPQLV--VNHRDFISVEGGHWHT 130

Query: 361 CAVTLSGDLYTWGDGIHNL-GLLGQVSEISHWIPRKVSGQ----MEGLQISSICCGPWHT 415
            A+   G ++TWG   HN  G LG  +      PR V  +    ++G  I  I    +HT
Sbjct: 131 VALKEDGTVWTWG---HNFYGELGDGTREHSQYPRSVVKKDKTTLQG--IVKIVSVGYHT 185

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
            A+   G+++++G   FG LGH          +VE L+ +K++  + G  H+ AI E   
Sbjct: 186 LALDKNGEVYSWGSNDFGELGHFHNVIQHYAEKVEGLQNIKSI--AVGWHHSVAINE--- 240

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
                NG    +LF WG     Q+    ++       VK+       K+ACG   ++A+ 
Sbjct: 241 -----NG----ELFMWGSDPSTQVRESTSDH--FNSIVKIDSLPPMVKIACGSWHSLAID 289

Query: 536 ATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
            TGQV+  G+  YG LG+  +    +P +I G    + IE+I  G +    +  K + YT
Sbjct: 290 ETGQVWGWGNNRYGMLGTKDTISYTYPKKIPG---FKGIEEIGGGCFQSLAIDKKGDFYT 346

Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
           +G  A+GQ G GD      PT ++
Sbjct: 347 FGGNASGQQGQGDFAYIFVPTKLD 370



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 111/274 (40%), Gaps = 48/274 (17%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVL---ESTVVLDAQSIACGSKHAV 309
           G V+ WG               E+    R  +  P+ +   + T +     I     H +
Sbjct: 137 GTVWTWGHNFYG----------ELGDGTREHSQYPRSVVKKDKTTLQGIVKIVSVGYHTL 186

Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
            + K G+++SWG    G+LGH       Y + ++ L   NI  +A G  H+ A+  +G+L
Sbjct: 187 ALDKNGEVYSWGSNDFGELGHFHNVIQHYAEKVEGL--QNIKSIAVGWHHSVAINENGEL 244

Query: 370 YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-------QISSICCGPWHTAAITSAG 422
           + WG            S+ S  +    S     +        +  I CG WH+ AI   G
Sbjct: 245 FMWG------------SDPSTQVRESTSDHFNSIVKIDSLPPMVKIACGSWHSLAIDETG 292

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           +++ +G+  +G LG  D  S + P+++   K ++ +   C  + + AI +          
Sbjct: 293 QVWGWGNNRYGMLGTKDTISYTYPKKIPGFKGIEEIGGGC--FQSLAIDK---------- 340

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
                 +T+G  A GQ G GD     VP  + +S
Sbjct: 341 --KGDFYTFGGNASGQQGQGDFAYIFVPTKLDLS 372



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 117/274 (42%), Gaps = 27/274 (9%)

Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI---DALNGSNIHMV 353
           D  S+  G  H V + + G +++WG    G+LG G      YP+ +   D      I  +
Sbjct: 119 DFISVEGGHWHTVALKEDGTVWTWGHNFYGELGDGTREHSQYPRSVVKKDKTTLQGIVKI 178

Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ-ISSICCGP 412
               +HT A+  +G++Y+WG   ++ G LG      H + +  + ++EGLQ I SI  G 
Sbjct: 179 VSVGYHTLALDKNGEVYSWGS--NDFGELGHF----HNVIQHYAEKVEGLQNIKSIAVGW 232

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
            H+ AI   G+LF +G      +        +   ++++L  +  V  +CG WH+ AI E
Sbjct: 233 HHSVAINENGELFMWGSDPSTQVRESTSDHFNSIVKIDSLPPM--VKIACGSWHSLAIDE 290

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITI 532
                         +++ WG+   G LG  D      P  +     I      C  S  +
Sbjct: 291 TG------------QVWGWGNNRYGMLGTKDTISYTYPKKIPGFKGIEEIGGGCFQS--L 336

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIE 565
           A+   G  ++ G    GQ G       F PT+++
Sbjct: 337 AIDKKGDFYTFGGNASGQQGQGDFAYIFVPTKLD 370



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 100/240 (41%), Gaps = 33/240 (13%)

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
           +  G  H   +   GK+FT G   +G +G       + P  VE L ++K +  + G  H+
Sbjct: 23  VDAGNGHAIVLDKDGKVFTMGRNNYGQIGDSTYEDHNTPYHVERLPKIKII--ARGYDHS 80

Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
            AI E              +++ WG    GQLG         P  V    D  F  V  G
Sbjct: 81  LAIDE------------QGRVWAWGRNNYGQLGSAIPIDFNTPQLVVNHRD--FISVEGG 126

Query: 528 HSITIALTATGQVFSMGSADYGQLGS--------PGST-GKFPTRIEGNIKHRYIEDIAC 578
           H  T+AL   G V++ G   YG+LG         P S   K  T ++G +K      I  
Sbjct: 127 HWHTVALKEDGTVWTWGHNFYGELGDGTREHSQYPRSVVKKDKTTLQGIVK------IVS 180

Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             YH   +    EVY+WG    G+LGH  N  +     VE L++  +KS+  G + + AI
Sbjct: 181 VGYHTLALDKNGEVYSWGSNDFGELGHFHNVIQHYAEKVEGLQN--IKSIAVGWHHSVAI 238



 Score = 69.7 bits (169), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 106/233 (45%), Gaps = 19/233 (8%)

Query: 230 RISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKV 289
           + +L   V   S G      D  G+V+ WG     G LG   N ++   A++ + L    
Sbjct: 169 KTTLQGIVKIVSVGYHTLALDKNGEVYSWGSN-DFGELGHFHNVIQ-HYAEKVEGLQ--- 223

Query: 290 LESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSN 349
                  + +SIA G  H+V + + G++F WG     ++        +    ID+L    
Sbjct: 224 -------NIKSIAVGWHHSVAINENGELFMWGSDPSTQVRESTSDHFNSIVKIDSL--PP 274

Query: 350 IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC 409
           +  +ACG +H+ A+  +G ++ WG+  +  G+LG    IS+  P+K+ G  +G  I  I 
Sbjct: 275 MVKIACGSWHSLAIDETGQVWGWGN--NRYGMLGTKDTISYTYPKKIPG-FKG--IEEIG 329

Query: 410 CGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
            G + + AI   G  +TFG    G  G GD +   VP +++   E K  +A  
Sbjct: 330 GGCFQSLAIDKKGDFYTFGGNASGQQGQGDFAYIFVPTKLDLSLEPKGEVAQA 382


>gi|302807678|ref|XP_002985533.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
 gi|300146739|gb|EFJ13407.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
          Length = 228

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 118/214 (55%), Gaps = 15/214 (7%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
           LP+ L  +  L    +ACGS H + +T  G ++S+G+G+ G LGHG     S P ++D+L
Sbjct: 25  LPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGTFGALGHGTTESCSSPVIVDSL 84

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
            G  I  +ACG+ H+CA+T+ G L++WG G +  G LG  S  +H  P  V+   + L +
Sbjct: 85  WGLGIVQIACGDNHSCALTVEGQLFSWGRGKY--GQLGCGSVENHLQPVPVTALSDRL-L 141

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
           + + CG  +T AI S G+LF++G G +G  GHG + +  VP+ V +L+    V AS G  
Sbjct: 142 TQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLENDNIVQASAGAR 201

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQL 499
           H  A+             S   ++ WGD  +GQ+
Sbjct: 202 HAVALT------------SGGGVYAWGDNEQGQV 223



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 114/236 (48%), Gaps = 14/236 (5%)

Query: 369 LYTWGDG-IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           L +WG G    LGL       +  +PR + G  E L    + CG  HT A+T +G +++F
Sbjct: 1   LVSWGCGEFGQLGLKDAAGVFNSPLPRFLRGSRE-LLFVRVACGSSHTLALTGSGDVYSF 59

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           G GTFGALGHG   S S P  V++L  L  V  +CG  H+ A+                +
Sbjct: 60  GQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALT------------VEGQ 107

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           LF+WG G  GQLG G  E  + P+ V    D    +V CG   T+A+ + GQ+FS G   
Sbjct: 108 LFSWGRGKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGH 167

Query: 548 YGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           +GQ G          ++  ++++  I   + G+ H   ++S   VY WG    GQ+
Sbjct: 168 WGQTGHGTQDNILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQV 223



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 103/224 (45%), Gaps = 15/224 (6%)

Query: 424 LFTFGDGTFGALGHGDRS---STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           L ++G G FG LG  D +   ++ +PR +   +EL  V  +CG  HT A+          
Sbjct: 1   LVSWGCGEFGQLGLKDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALT--------- 51

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
               S  ++++G G  G LGHG  E    P+ V     +   ++ACG + + ALT  GQ+
Sbjct: 52  ---GSGDVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQL 108

Query: 541 FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
           FS G   YGQLG               +  R +  + CG+ +   + S  ++++WG G  
Sbjct: 109 FSWGRGKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHW 168

Query: 601 GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           GQ GHG  +N   P LV +L +  +     G+    A+    GV
Sbjct: 169 GQTGHGTQDNILVPKLVCSLENDNIVQASAGARHAVALTSGGGV 212


>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
          Length = 556

 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 23/314 (7%)

Query: 291 ESTVVLDAQSIACGS--KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
           E  + L  Q+   GS     +  T   +IF  G    G LG G       P+ +D+LNG 
Sbjct: 44  EEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGK 103

Query: 349 NIHMVACGEF-HTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQIS 406
            I  ++ G   H    T  G+++TWG   HN    LG  +     +P  +S  +   Q+ 
Sbjct: 104 KIACLSYGSGPHIVLATTEGEVFTWG---HNAYSQLGNGTTNHGLVPCHISTNLSNKQVI 160

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVW 465
            + CG +H+  +TS G++F +G    G +G G   +  +PR V    + K V+  +CG  
Sbjct: 161 EVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQM 220

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
              A+V+            + +++ WG    GQLG G++  +  P  V     I   +VA
Sbjct: 221 CCMAVVD------------TGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVA 268

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIA 584
           CG++ T+ LT  GQV++ G+  YGQLG+   + + +PT +    K R IE  AC S H +
Sbjct: 269 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE-KDRIIEIAACHSTHTS 327

Query: 585 VVSSK-SEVYTWGK 597
              ++   VY WG+
Sbjct: 328 AAKTQGGHVYMWGQ 341



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 109/220 (49%), Gaps = 17/220 (7%)

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           ++F  G    G LG GD  ST  PR +++L   K    S G      +    G+      
Sbjct: 71  EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGE------ 124

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS---FCKVACGHSITIALTATGQ 539
                +FTWG  A  QLG+G     +VP    +S ++S     +VACG   ++ LT+ G+
Sbjct: 125 -----VFTWGHNAYSQLGNGTTNHGLVP--CHISTNLSNKQVIEVACGSYHSLVLTSDGE 177

Query: 540 VFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           VF+ G  + GQ+GS  +  +  P R+ G ++++ +  IACG      V    EVY WG  
Sbjct: 178 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 237

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            NGQLG G++ N+ TP  V AL+  +V+ V CG   T  +
Sbjct: 238 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 277



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 131/272 (48%), Gaps = 25/272 (9%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGS----KHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           D +  + P+ L+S   L+ + IAC S     H VL T +G++F+WG  +  +LG+G    
Sbjct: 87  DVQSTIEPRRLDS---LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNH 143

Query: 336 VSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
              P  I   L+   +  VACG +H+  +T  G+++ WG   +N G +G  S ++  IPR
Sbjct: 144 GLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG--YNNSGQVGSGSTVNQPIPR 201

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           +V+G ++   + +I CG     A+   G+++ +G    G LG G+  +   P  V  L+ 
Sbjct: 202 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 261

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
           ++    +CG  HT  + +              +++ WG  + GQLG G+   +  P  V 
Sbjct: 262 IRVQRVACGYAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSYPTPVT 309

Query: 515 VSDDISFCKVACGHS--ITIALTATGQVFSMG 544
           V  D    ++A  HS   + A T  G V+  G
Sbjct: 310 VEKD-RIIEIAACHSTHTSAAKTQGGHVYMWG 340



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 114/233 (48%), Gaps = 23/233 (9%)

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAA 469
           GP H    T+ G++FT+G   +  LG+G  +   VP  + T L   + +  +CG +H+  
Sbjct: 113 GP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLV 171

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVA 525
           +             S  ++F WG    GQ+G G       PR V  C++    ++   +A
Sbjct: 172 LT------------SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT---IA 216

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIE-GNIKHRYIEDIACGSYHIA 584
           CG    +A+  TG+V+  G    GQLG  G++G  PT      ++   ++ +ACG  H  
Sbjct: 217 CGQMCCMAVVDTGEVYVWGYNGNGQLGL-GNSGNQPTPCRVAALQGIRVQRVACGYAHTL 275

Query: 585 VVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           V++ + +VY WG  + GQLG G+  N+  PT V   +D+ ++   C S  T+A
Sbjct: 276 VLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 328



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 21/181 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK----VLESTVVLDAQSIACGSKHA 308
           G+VF WG            N  ++ S    +  +P+     L++ VV+   +IACG    
Sbjct: 176 GEVFAWGYN----------NSGQVGSGSTVNQPIPRRVTGCLQNKVVV---TIACGQMCC 222

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           + V   G+++ WG    G+LG G   +   P  + AL G  +  VACG  HT  +T  G 
Sbjct: 223 MAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 282

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT-AAITSAGKLFTF 427
           +Y W  G ++ G LG  ++ +   P  V+ + + + I    C   HT AA T  G ++ +
Sbjct: 283 VYAW--GANSYGQLGTGNKSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMW 339

Query: 428 G 428
           G
Sbjct: 340 G 340


>gi|340721975|ref|XP_003399388.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like isoform 1
           [Bombus terrestris]
          Length = 534

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 150/295 (50%), Gaps = 21/295 (7%)

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF-HTCAVTLS 366
           A+++T+   +++ G  + G LG G   +  YPK ++AL G NI   A G+  H  A+T  
Sbjct: 36  ALIITRDKIVYALGSNTSGCLGTGDACNTFYPKKVEALCGKNIKTFAYGKGPHVLALTEE 95

Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
           G +Y+WG   H  G LG  S  +H IP  V+  +    I  I CG  H+ A+T+ GK++ 
Sbjct: 96  GKVYSWGHNSH--GELGNCST-NHMIPMPVTKNLNDEFIVDIACGSHHSLALTNEGKVYA 152

Query: 427 FGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVWHTAAIVEVAGKTSGSNGLSS 485
           +G+ T G +G     + + P +V +    KTV+  SCG            ++S      +
Sbjct: 153 WGENTCGQVGKSVNINENTPMKVNSTLAGKTVICISCG------------QSSSMTVTDT 200

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
            K++ WG    GQLG G+   +V P  V +  D+   K+ CG++  +AL+  G ++  G 
Sbjct: 201 GKVYGWGCNDVGQLGIGNYVNQVDPCEVTMLVDVVIKKIVCGYAHVLALSNKGALYVWGG 260

Query: 546 ADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSY-HIAVVSSK-SEVYTWGK 597
            +YGQLG         P +++  +  R + D+A   Y HI++  ++ + ++ WG+
Sbjct: 261 NNYGQLGLGMKMNMCNPVQLKQEMMGR-VLDVATSHYNHISIAMAEGNRIFMWGE 314



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 124/273 (45%), Gaps = 19/273 (6%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGS-KHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           + + D  +   PK +E+    + ++ A G   H + +T++G+++SWG  S G+LG+    
Sbjct: 56  LGTGDACNTFYPKKVEALCGKNIKTFAYGKGPHVLALTEEGKVYSWGHNSHGELGNCSTN 115

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
            +    +   LN   I  +ACG  H+ A+T  G +Y WG+  +  G +G+   I+   P 
Sbjct: 116 HMIPMPVTKNLNDEFIVDIACGSHHSLALTNEGKVYAWGE--NTCGQVGKSVNINENTPM 173

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           KV+  + G  +  I CG   +  +T  GK++ +G    G LG G+  +   P EV  L +
Sbjct: 174 KVNSTLAGKTVICISCGQSSSMTVTDTGKVYGWGCNDVGQLGIGNYVNQVDPCEVTMLVD 233

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCV 513
           +      CG  H  A             LS+K  L+ WG    GQLG G       P+ +
Sbjct: 234 VVIKKIVCGYAHVLA-------------LSNKGALYVWGGNNYGQLGLGMKMNMCNPVQL 280

Query: 514 KVSDDISFCKVACGH--SITIALTATGQVFSMG 544
           K         VA  H   I+IA+    ++F  G
Sbjct: 281 KQEMMGRVLDVATSHYNHISIAMAEGNRIFMWG 313



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 18/225 (8%)

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL--KELKTVMASCGVWHTAAIVEVAG 475
           IT    ++  G  T G LG GD  +T  P++VE L  K +KT     G  H  A+ E   
Sbjct: 39  ITRDKIVYALGSNTSGCLGTGDACNTFYPKKVEALCGKNIKTFAYGKGP-HVLALTE--- 94

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV-KVSDDISFCKVACGHSITIAL 534
                      K+++WG  + G+LG+      ++P+ V K  +D     +ACG   ++AL
Sbjct: 95  ---------EGKVYSWGHNSHGELGNCSTN-HMIPMPVTKNLNDEFIVDIACGSHHSLAL 144

Query: 535 TATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
           T  G+V++ G    GQ+G S       P ++   +  + +  I+CG      V+   +VY
Sbjct: 145 TNEGKVYAWGENTCGQVGKSVNINENTPMKVNSTLAGKTVICISCGQSSSMTVTDTGKVY 204

Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            WG    GQLG G+  N+  P  V  L D  +K +VCG     A+
Sbjct: 205 GWGCNDVGQLGIGNYVNQVDPCEVTMLVDVVIKKIVCGYAHVLAL 249



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 136/312 (43%), Gaps = 28/312 (8%)

Query: 341 LIDALNGSNIHM-VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ 399
            +D+   S IHM +  G+    A+ ++ D   +  G +  G LG     + + P+KV   
Sbjct: 14  FLDSNYVSKIHMALVYGDLGNEALIITRDKIVYALGSNTSGCLGTGDACNTFYPKKVEA- 72

Query: 400 MEGLQISSICCGPW-HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV-ETLKELKT 457
           + G  I +   G   H  A+T  GK++++G  + G LG+   ++  +P  V + L +   
Sbjct: 73  LCGKNIKTFAYGKGPHVLALTEEGKVYSWGHNSHGELGNCS-TNHMIPMPVTKNLNDEFI 131

Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--V 515
           V  +CG  H+ A+             +  K++ WG+   GQ+G         P+ V   +
Sbjct: 132 VDIACGSHHSLALT------------NEGKVYAWGENTCGQVGKSVNINENTPMKVNSTL 179

Query: 516 SDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIED 575
           +     C ++CG S ++ +T TG+V+  G  D GQLG      +        +    I+ 
Sbjct: 180 AGKTVIC-ISCGQSSSMTVTDTGKVYGWGCNDVGQLGIGNYVNQVDPCEVTMLVDVVIKK 238

Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           I CG  H+  +S+K  +Y WG    GQLG G   N   P         Q+K  + G    
Sbjct: 239 IVCGYAHVLALSNKGALYVWGGNNYGQLGLGMKMNMCNPV--------QLKQEMMGRVLD 290

Query: 636 AAICLHKGVSIA 647
            A   +  +SIA
Sbjct: 291 VATSHYNHISIA 302



 Score = 56.2 bits (134), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 14/179 (7%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WGE    G +G +VN  E +       L  K    TV+     I+CG   ++ VT
Sbjct: 148 GKVYAWGENTC-GQVGKSVNINENTPMKVNSTLAGK----TVI----CISCGQSSSMTVT 198

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G+++ WG    G+LG G   +   P  +  L    I  + CG  H  A++  G LY W
Sbjct: 199 DTGKVYGWGCNDVGQLGIGNYVNQVDPCEVTMLVDVVIKKIVCGYAHVLALSNKGALYVW 258

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA--GKLFTFGD 429
           G   +N G LG   +++   P ++  +M G ++  +    ++  +I  A   ++F +G+
Sbjct: 259 GG--NNYGQLGLGMKMNMCNPVQLKQEMMG-RVLDVATSHYNHISIAMAEGNRIFMWGE 314


>gi|118100936|ref|XP_417522.2| PREDICTED: protein RCC2 [Gallus gallus]
          Length = 464

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 160/336 (47%), Gaps = 49/336 (14%)

Query: 305 SKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVT 364
           + H++L+T +G+++SWG    G+LGHG    V  PKLI+ L    I + ACG  HT A+T
Sbjct: 101 AAHSLLITAEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLGSEAIVLAACGRNHTLALT 160

Query: 365 LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
            +G +Y +G+  + +G LG +   +  +P        G  I+ + CG   +  +   G L
Sbjct: 161 ETGSVYAFGE--NKMGQLG-LGNQTDAVPSPTQIMYNGQPITKMACGAEFSMIMDCKGNL 217

Query: 425 FTFGDGTFGALGHG------------DRSSTSVPREVETLKE---------LKTVM---A 460
           ++FG   +G LGH             +     VPR V    E         +  V+    
Sbjct: 218 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 277

Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD--D 518
           +CG  HT  +             S K++F+WG G  G+LGH + +  +VP  VK+ D   
Sbjct: 278 ACGANHTLVLD------------SQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPG 325

Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIAC 578
               ++  G++ + A++ TG +F  G+ +  +      +  +P  ++ ++    I  +AC
Sbjct: 326 RGAAQIYAGYTCSFAVSETGGLFFWGATNTSR-----ESTMYPKAVQ-DLCGWKIRSLAC 379

Query: 579 GSYHIAVVSSKSEVYTWGKGAN-GQLGHGDNENKQT 613
           G   I V + +S + +WG     G+LG+GD++ K +
Sbjct: 380 GKSSIIVAADESTI-SWGPSPTFGELGYGDHKPKSS 414



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 104/247 (42%), Gaps = 35/247 (14%)

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
           G+L  FG   +  +G  +     VP++    + L   +     +   + V+V    SG  
Sbjct: 46  GQLLIFGATNWDLIGRKE-----VPKQQAAYRNLGQNLWGPHRYGCLSGVQVRSVVSGPC 100

Query: 482 GLSS------KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
              S       KL++WG   +GQLGHGD +    P  ++V    +    ACG + T+ALT
Sbjct: 101 AAHSLLITAEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLGSEAIVLAACGRNHTLALT 160

Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
            TG V++ G    GQLG    T   P+  +     + I  +ACG+    ++  K  +Y++
Sbjct: 161 ETGSVYAFGENKMGQLGLGNQTDAVPSPTQIMYNGQPITKMACGAEFSMIMDCKGNLYSF 220

Query: 596 GKGANGQLGHGDNEN----------------KQTPTLVEALRDKQ--------VKSVVCG 631
           G    GQLGH  +                  ++    +E  +D Q        V+ V CG
Sbjct: 221 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 280

Query: 632 SNFTAAI 638
           +N T  +
Sbjct: 281 ANHTLVL 287


>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
 gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
 gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Nomascus leucogenys]
 gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
           paniscus]
 gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
           [Gorilla gorilla gorilla]
 gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; Short=CHC1-L;
           AltName: Full=RCC1-like G exchanging factor; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
 gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Homo sapiens]
 gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
 gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
 gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_a [Homo sapiens]
 gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [synthetic construct]
 gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [synthetic construct]
 gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 23/314 (7%)

Query: 291 ESTVVLDAQSIACGS--KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
           E  + L  Q+   GS     +  T   +IF  G    G LG G       P+ +D+LNG 
Sbjct: 39  EEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGK 98

Query: 349 NIHMVACGEF-HTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQIS 406
            I  ++ G   H    T  G+++TWG   HN    LG  +     +P  +S  +   Q+ 
Sbjct: 99  KIACLSYGSGPHIVLATTEGEVFTWG---HNAYSQLGNGTTNHGLVPCHISTNLSNKQVI 155

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVW 465
            + CG +H+  +TS G++F +G    G +G G   +  +PR V    + K V+  +CG  
Sbjct: 156 EVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQM 215

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
              A+V+            + +++ WG    GQLG G++  +  P  V     I   +VA
Sbjct: 216 CCMAVVD------------TGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVA 263

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIA 584
           CG++ T+ LT  GQV++ G+  YGQLG+   + + +PT +    K R IE  AC S H +
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE-KDRIIEIAACHSTHTS 322

Query: 585 VVSSK-SEVYTWGK 597
              ++   VY WG+
Sbjct: 323 AAKTQGGHVYMWGQ 336



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 109/220 (49%), Gaps = 17/220 (7%)

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           ++F  G    G LG GD  ST  PR +++L   K    S G      +    G+      
Sbjct: 66  EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGE------ 119

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS---FCKVACGHSITIALTATGQ 539
                +FTWG  A  QLG+G     +VP    +S ++S     +VACG   ++ LT+ G+
Sbjct: 120 -----VFTWGHNAYSQLGNGTTNHGLVP--CHISTNLSNKQVIEVACGSYHSLVLTSDGE 172

Query: 540 VFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           VF+ G  + GQ+GS  +  +  P R+ G ++++ +  IACG      V    EVY WG  
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            NGQLG G++ N+ TP  V AL+  +V+ V CG   T  +
Sbjct: 233 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 131/272 (48%), Gaps = 25/272 (9%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGS----KHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           D +  + P+ L+S   L+ + IAC S     H VL T +G++F+WG  +  +LG+G    
Sbjct: 82  DVQSTIEPRRLDS---LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNH 138

Query: 336 VSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
              P  I   L+   +  VACG +H+  +T  G+++ WG   +N G +G  S ++  IPR
Sbjct: 139 GLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG--YNNSGQVGSGSTVNQPIPR 196

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           +V+G ++   + +I CG     A+   G+++ +G    G LG G+  +   P  V  L+ 
Sbjct: 197 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 256

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
           ++    +CG  HT  + +              +++ WG  + GQLG G+   +  P  V 
Sbjct: 257 IRVQRVACGYAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSYPTPVT 304

Query: 515 VSDDISFCKVACGHS--ITIALTATGQVFSMG 544
           V  D    ++A  HS   + A T  G V+  G
Sbjct: 305 VEKD-RIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 25/234 (10%)

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAA 469
           GP H    T+ G++FT+G   +  LG+G  +   VP  + T L   + +  +CG +H+  
Sbjct: 108 GP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLV 166

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVA 525
           +             S  ++F WG    GQ+G G       PR V  C++    ++   +A
Sbjct: 167 LT------------SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT---IA 211

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHI 583
           CG    +A+  TG+V+  G    GQLG  G++G  PT  R+   ++   ++ +ACG  H 
Sbjct: 212 CGQMCCMAVVDTGEVYVWGYNGNGQLGL-GNSGNQPTPCRVAA-LQGIRVQRVACGYAHT 269

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            V++ + +VY WG  + GQLG G+  N+  PT V   +D+ ++   C S  T+A
Sbjct: 270 LVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 323



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 21/181 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK----VLESTVVLDAQSIACGSKHA 308
           G+VF WG            N  ++ S    +  +P+     L++ VV+   +IACG    
Sbjct: 171 GEVFAWGYN----------NSGQVGSGSTVNQPIPRRVTGCLQNKVVV---TIACGQMCC 217

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           + V   G+++ WG    G+LG G   +   P  + AL G  +  VACG  HT  +T  G 
Sbjct: 218 MAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT-AAITSAGKLFTF 427
           +Y W  G ++ G LG  ++ +   P  V+ + + + I    C   HT AA T  G ++ +
Sbjct: 278 VYAW--GANSYGQLGTGNKSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMW 334

Query: 428 G 428
           G
Sbjct: 335 G 335


>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
           troglodytes]
          Length = 552

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 148/313 (47%), Gaps = 21/313 (6%)

Query: 291 ESTVVLDAQSIACGS--KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
           E  + L  Q+   GS     +  T   +IF  G    G LG G       P+ +D+LNG 
Sbjct: 42  EEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGK 101

Query: 349 NIHMVACGEF-HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISS 407
            I  ++ G   H    T  G+++TWG   ++   LG  +     +P  +S  +   Q+  
Sbjct: 102 KIACLSYGSGPHIVLATTEGEVFTWGHNAYSQ--LGNGTTNHGLVPCHISTNLSNKQVIE 159

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVWH 466
           + CG +H+  +TS G++F +G    G +G G   +  +PR V    + K V+  +CG   
Sbjct: 160 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMC 219

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
             A+V+            + +++ WG    GQLG G++  +  P  V     I   +VAC
Sbjct: 220 CMAVVD------------TGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVAC 267

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAV 585
           G++ T+ LT  GQV++ G+  YGQLG+   + + +PT +    K R IE  AC S H + 
Sbjct: 268 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE-KDRIIEIAACHSTHTSA 326

Query: 586 VSSK-SEVYTWGK 597
             ++   VY WG+
Sbjct: 327 AKTQGGHVYMWGQ 339



 Score =  114 bits (284), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 109/220 (49%), Gaps = 17/220 (7%)

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           ++F  G    G LG GD  ST  PR +++L   K    S G      +    G+      
Sbjct: 69  EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGE------ 122

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS---FCKVACGHSITIALTATGQ 539
                +FTWG  A  QLG+G     +VP    +S ++S     +VACG   ++ LT+ G+
Sbjct: 123 -----VFTWGHNAYSQLGNGTTNHGLVP--CHISTNLSNKQVIEVACGSYHSLVLTSDGE 175

Query: 540 VFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           VF+ G  + GQ+GS  +  +  P R+ G ++++ +  IACG      V    EVY WG  
Sbjct: 176 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 235

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            NGQLG G++ N+ TP  V AL+  +V+ V CG   T  +
Sbjct: 236 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 275



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 131/272 (48%), Gaps = 25/272 (9%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGS----KHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           D +  + P+ L+S   L+ + IAC S     H VL T +G++F+WG  +  +LG+G    
Sbjct: 85  DVQSTIEPRRLDS---LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNH 141

Query: 336 VSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
              P  I   L+   +  VACG +H+  +T  G+++ WG   +N G +G  S ++  IPR
Sbjct: 142 GLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG--YNNSGQVGSGSTVNQPIPR 199

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           +V+G ++   + +I CG     A+   G+++ +G    G LG G+  +   P  V  L+ 
Sbjct: 200 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 259

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
           ++    +CG  HT  + +              +++ WG  + GQLG G+   +  P  V 
Sbjct: 260 IRVQRVACGYAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSYPTPVT 307

Query: 515 VSDDISFCKVACGHS--ITIALTATGQVFSMG 544
           V  D    ++A  HS   + A T  G V+  G
Sbjct: 308 VEKD-RIIEIAACHSTHTSAAKTQGGHVYMWG 338



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 25/234 (10%)

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAA 469
           GP H    T+ G++FT+G   +  LG+G  +   VP  + T L   + +  +CG +H+  
Sbjct: 111 GP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLV 169

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVA 525
           +             S  ++F WG    GQ+G G       PR V  C++    ++   +A
Sbjct: 170 LT------------SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT---IA 214

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHI 583
           CG    +A+  TG+V+  G    GQLG  G++G  PT  R+   ++   ++ +ACG  H 
Sbjct: 215 CGQMCCMAVVDTGEVYVWGYNGNGQLGL-GNSGNQPTPCRVAA-LQGIRVQRVACGYAHT 272

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            V++ + +VY WG  + GQLG G+  N+  PT V   +D+ ++   C S  T+A
Sbjct: 273 LVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 326



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 21/181 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK----VLESTVVLDAQSIACGSKHA 308
           G+VF WG            N  ++ S    +  +P+     L++ VV+   +IACG    
Sbjct: 174 GEVFAWGYN----------NSGQVGSGSTVNQPIPRRVTGCLQNKVVV---TIACGQMCC 220

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           + V   G+++ WG    G+LG G   +   P  + AL G  +  VACG  HT  +T  G 
Sbjct: 221 MAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 280

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT-AAITSAGKLFTF 427
           +Y W  G ++ G LG  ++ +   P  V+ + + + I    C   HT AA T  G ++ +
Sbjct: 281 VYAW--GANSYGQLGTGNKSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMW 337

Query: 428 G 428
           G
Sbjct: 338 G 338


>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 23/314 (7%)

Query: 291 ESTVVLDAQSIACGS--KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
           E  + L  Q+   GS     +  T   +IF  G    G LG G       P+ +D+LNG 
Sbjct: 39  EEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGK 98

Query: 349 NIHMVACGEF-HTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQIS 406
            I  ++ G   H    T  G+++TWG   HN    LG  +     +P  +S  +   Q+ 
Sbjct: 99  KIACLSYGSGPHIVLATTEGEVFTWG---HNAYSQLGNGTTNHGLVPCHISTNLSNKQVI 155

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVW 465
            + CG +H+  +TS G++F +G    G +G G   +  +PR V    + K V+  +CG  
Sbjct: 156 EVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQM 215

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
              A+V+            + +++ WG    GQLG G++  +  P  V     I   +VA
Sbjct: 216 CCMAVVD------------TGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVA 263

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIA 584
           CG++ T+ LT  GQV++ G+  YGQLG+   + + +PT +    K R IE  AC S H +
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE-KDRIIEIAACHSTHTS 322

Query: 585 VVSSK-SEVYTWGK 597
              ++   VY WG+
Sbjct: 323 AAKTQGGHVYMWGQ 336



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 109/220 (49%), Gaps = 17/220 (7%)

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           ++F  G    G LG GD  ST  PR +++L   K    S G      +    G+      
Sbjct: 66  EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGE------ 119

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS---FCKVACGHSITIALTATGQ 539
                +FTWG  A  QLG+G     +VP    +S ++S     +VACG   ++ LT+ G+
Sbjct: 120 -----VFTWGHNAYSQLGNGTTNHGLVP--CHISTNLSNKQVIEVACGSYHSLVLTSDGE 172

Query: 540 VFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           VF+ G  + GQ+GS  +  +  P R+ G ++++ +  IACG      V    EVY WG  
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            NGQLG G++ N+ TP  V AL+  +V+ V CG   T  +
Sbjct: 233 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 131/272 (48%), Gaps = 25/272 (9%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGS----KHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           D +  + P+ L+S   L+ + IAC S     H VL T +G++F+WG  +  +LG+G    
Sbjct: 82  DVQSTIEPRRLDS---LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNH 138

Query: 336 VSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
              P  I   L+   +  VACG +H+  +T  G+++ WG   +N G +G  S ++  IPR
Sbjct: 139 GLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG--YNNSGQVGSGSTVNQPIPR 196

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           +V+G ++   + +I CG     A+   G+++ +G    G LG G+  +   P  V  L+ 
Sbjct: 197 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 256

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
           ++    +CG  HT  + +              +++ WG  + GQLG G+   +  P  V 
Sbjct: 257 IRVQRVACGYAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSYPTPVT 304

Query: 515 VSDDISFCKVACGHS--ITIALTATGQVFSMG 544
           V  D    ++A  HS   + A T  G V+  G
Sbjct: 305 VEKD-RIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 25/234 (10%)

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAA 469
           GP H    T+ G++FT+G   +  LG+G  +   VP  + T L   + +  +CG +H+  
Sbjct: 108 GP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLV 166

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVA 525
           +             S  ++F WG    GQ+G G       PR V  C++    ++   +A
Sbjct: 167 LT------------SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT---IA 211

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHI 583
           CG    +A+  TG+V+  G    GQLG  G++G  PT  R+   ++   ++ +ACG  H 
Sbjct: 212 CGQMCCMAVVDTGEVYVWGYNGNGQLGL-GNSGNQPTPCRVAA-LQGIRVQRVACGYAHT 269

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            V++ + +VY WG  + GQLG G+  N+  PT V   +D+ ++   C S  T+A
Sbjct: 270 LVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 323



 Score = 67.0 bits (162), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 21/181 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK----VLESTVVLDAQSIACGSKHA 308
           G+VF WG            N  ++ S    +  +P+     L++ VV+   +IACG    
Sbjct: 171 GEVFAWGYN----------NSGQVGSGSTVNQPIPRRVTGCLQNKVVV---TIACGQMCC 217

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           + V   G+++ WG    G+LG G   +   P  + AL G  +  VACG  HT  +T  G 
Sbjct: 218 MAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT-AAITSAGKLFTF 427
           +Y W  G ++ G LG  ++ +   P  V+ + + + I    C   HT AA T  G ++ +
Sbjct: 278 VYAW--GANSYGQLGTGNKSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMW 334

Query: 428 G 428
           G
Sbjct: 335 G 335


>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
           porcellus]
          Length = 551

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 150/313 (47%), Gaps = 23/313 (7%)

Query: 291 ESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNI 350
           E  V+  A          +  T   +IF  G    G LG G       P+ +D+L+   I
Sbjct: 41  ELQVIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKI 100

Query: 351 HMVACGEF-HTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISH-WIPRKVSGQMEGLQISS 407
             ++ G   H    T  G++++WG   HN  G LG    I+H  +P  +S  +   Q++ 
Sbjct: 101 ACLSYGSGPHIVLATTEGEVFSWG---HNAYGQLGN-GTINHGLVPSHISTNLSNKQVTE 156

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWH 466
           + CG +H+  +TS G++F +G    G +G G  ++ ++PR V    + K V+  +CG   
Sbjct: 157 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMC 216

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           + A+V+            + +++ WG    GQLG G +  +  P  V     I   +VAC
Sbjct: 217 SMAVVD------------TGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVAC 264

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAV 585
           G++ T+ LT  GQV++ G+  YGQLG+   + + +PT +    K R IE  AC S H + 
Sbjct: 265 GYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACHSTHTSA 323

Query: 586 VSSK-SEVYTWGK 597
             ++   VY WG+
Sbjct: 324 AKTQGGHVYMWGQ 336



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 112/221 (50%), Gaps = 19/221 (8%)

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           ++F  G    G LG GD  ST  PR +++L + K    S G      +    G+      
Sbjct: 66  EIFVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGPHIVLATTEGE------ 119

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS---FCKVACGHSITIALTATGQ 539
                +F+WG  A GQLG+G     +VP    +S ++S     +VACG   ++ LT+ G+
Sbjct: 120 -----VFSWGHNAYGQLGNGTINHGLVP--SHISTNLSNKQVTEVACGSYHSLVLTSDGE 172

Query: 540 VFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
           VF+ G  + GQ+GS GST     P R+ G ++++ + +IACG      V    EVY WG 
Sbjct: 173 VFAWGYNNSGQVGS-GSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGY 231

Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             NGQLG G + N+ TP  V AL+  +V+ V CG   T  +
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 130/272 (47%), Gaps = 25/272 (9%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGS----KHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           D +  L P+ L+S   L  + IAC S     H VL T +G++FSWG  + G+LG+G    
Sbjct: 82  DVQSTLEPRRLDS---LSDKKIACLSYGSGPHIVLATTEGEVFSWGHNAYGQLGNGTINH 138

Query: 336 VSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
              P  I   L+   +  VACG +H+  +T  G+++ WG   +N G +G  S  +  IPR
Sbjct: 139 GLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWG--YNNSGQVGSGSTANQAIPR 196

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           +V+G ++   + +I CG   + A+   G+++ +G    G LG G   +   P  V  L+ 
Sbjct: 197 RVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
           ++    +CG  HT  + +              +++ WG  + GQLG G+   +  P  V 
Sbjct: 257 IRVQRVACGYAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSYPTPVV 304

Query: 515 VSDDISFCKVACGHS--ITIALTATGQVFSMG 544
           V  D    ++A  HS   + A T  G V+  G
Sbjct: 305 VEKD-RIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 125/257 (48%), Gaps = 34/257 (13%)

Query: 393 PRKVSGQMEGLQISSICC-----GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPR 447
           PR+    ++ L    I C     GP H    T+ G++F++G   +G LG+G  +   VP 
Sbjct: 89  PRR----LDSLSDKKIACLSYGSGP-HIVLATTEGEVFSWGHNAYGQLGNGTINHGLVPS 143

Query: 448 EVET-LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG---- 502
            + T L   +    +CG +H+  +             S  ++F WG    GQ+G G    
Sbjct: 144 HISTNLSNKQVTEVACGSYHSLVLT------------SDGEVFAWGYNNSGQVGSGSTAN 191

Query: 503 DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT 562
            A PR V  C++   +     +ACG   ++A+  TG+V+  G    GQLG  GS+G  PT
Sbjct: 192 QAIPRRVTGCLQ---NKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLG-LGSSGNQPT 247

Query: 563 --RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
             R+   ++   ++ +ACG  H  V++ + +VY WG  + GQLG G+  N+  PT V   
Sbjct: 248 PCRVAA-LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVE 306

Query: 621 RDKQVKSVVCGSNFTAA 637
           +D+ ++   C S  T+A
Sbjct: 307 KDRIIEIAACHSTHTSA 323



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 126/243 (51%), Gaps = 28/243 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQ--SIACGSKHAVL 310
           G+VF WG      L  G +N            L+P  + ST + + Q   +ACGS H+++
Sbjct: 118 GEVFSWGHNAYGQLGNGTIN----------HGLVPSHI-STNLSNKQVTEVACGSYHSLV 166

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDL 369
           +T  G++F+WG  + G++G G  A+ + P+ +   L    +  +ACG+  + AV  +G++
Sbjct: 167 LTSDGEVFAWGYNNSGQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEV 226

Query: 370 YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
           Y W  G +  G LG  S  +   P +V+  ++G+++  + CG  HT  +T  G+++ +G 
Sbjct: 227 YVW--GYNGNGQLGLGSSGNQPTPCRVAA-LQGIRVQRVACGYAHTLVLTDEGQVYAWGA 283

Query: 430 GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
            ++G LG G++S+ S P  V   K+    +A+C   HT+     A KT G +      ++
Sbjct: 284 NSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTS-----AAKTQGGH------VY 332

Query: 490 TWG 492
            WG
Sbjct: 333 MWG 335


>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1451

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 125/433 (28%), Positives = 199/433 (45%), Gaps = 58/433 (13%)

Query: 232 SLSSAVSSSSQGSCHEDF-DGLGDVFIWGEGLGNGLLG-GAVNGVEISSADRRDALLPKV 289
           +L+SA S  + G+ H  +    G V+ WG G G+G LG G+V+               +V
Sbjct: 45  ALASATSKVAAGAQHSLYVTQAGTVWAWG-GNGSGQLGTGSVS-------------FQRV 90

Query: 290 LESTV--VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
           +   V  + D  SIA G  H++ +     +++WG  + G++G G   D   P+ +  L  
Sbjct: 91  VAQQVPGLTDVTSIAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVDRPTPQKVPGL-- 148

Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ-IS 406
           S++  VA GEFH+ A+   G ++ WG   +  G LG+     H  P     Q+ GL  + 
Sbjct: 149 SDVVAVAAGEFHSLALRADGTVWAWGSNFY--GQLGR----GHSQPGPSPAQVVGLTGVV 202

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
           ++  G   + A+ S G ++ +G    G LG G       P +V  L+ +  V A  G++H
Sbjct: 203 ALAAGFDFSLAVRSDGTVWAWGANGSGQLGDGTYIQRLAPTQVSQLQGVSAVTA--GLYH 260

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
             A+             S   ++ WG  + GQ+G G    R  P  V+V+       VA 
Sbjct: 261 ALAL------------RSDGTVWAWGSNSSGQMGDGTWTDR--PSPVQVTSIARAKAVAA 306

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIA 584
             + ++ L   G VF+ G    GQLG  G+T     P R+ G      +  +A G+ H  
Sbjct: 307 QDAGSLVLLDDGGVFAWGLNSQGQLGI-GTTADSPLPVRVRG---LGAVTSLAAGTQHAV 362

Query: 585 VVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           V+ +   ++TWG GA GQLGHG +E   +P +V  L +  V SV  GS        H   
Sbjct: 363 VLRADGTLWTWGHGATGQLGHGSSERMLSPEVVTRLSN--VASVASGS-------FHSVA 413

Query: 645 SIADHSICSGCRN 657
           +++D S+ +  RN
Sbjct: 414 ALSDGSVWTWGRN 426



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 167/351 (47%), Gaps = 31/351 (8%)

Query: 288  KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
            K+  S V++ A S++   +HA  +   G + +WG  + G+LG G     + P  +  L  
Sbjct: 1096 KLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLGDGTTESRATPITVAGLG- 1154

Query: 348  SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISS 407
              +  VA    HT A+   G ++ WGD  +  G LG  S     +P +V G +E  ++++
Sbjct: 1155 -AMVAVAPAARHTLALRSDGTVWAWGD--NTFGQLGDGSNTRRTLPVQVVG-LE--KVTA 1208

Query: 408  ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
            I  G +H+ A+   G ++ +G   FG LG G   + +VP  +  L     V  + G +H+
Sbjct: 1209 IAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTMDARAVPTRMLGLD--GAVAVAGGEYHS 1266

Query: 468  AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
              +     +  G+       L+  G+ + GQLG G    R+ P  V   D +   +    
Sbjct: 1267 LML-----RFDGT-------LWATGNNSHGQLGEGTFTNRLSPFQVVELDQVRTVRAGGY 1314

Query: 528  HSITIALTATGQVFSMGSADYGQLGSPG-STGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
            HS+  AL   G V++ G    GQLG    +T + P  + G      I  +  G+ H   V
Sbjct: 1315 HSV--ALREDGTVWTWGHNGQGQLGDGTVTTRRVPAPVPGLTA---IASVGAGTSHTFAV 1369

Query: 587  SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
             S  E + WG+ ++GQLG GD+ ++  PTLV+ L    VKSV+ G +F+ A
Sbjct: 1370 GS--ETWAWGRNSHGQLGTGDSSDRLEPTLVKGLHG--VKSVLAGGDFSVA 1416



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 156/341 (45%), Gaps = 31/341 (9%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           ++  G  HA+ +   G +++WG  S G++G G   D   P  + ++  +    VA  +  
Sbjct: 253 AVTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWTDRPSPVQVTSI--ARAKAVAAQDAG 310

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           +  +   G ++ WG  +++ G LG  +     +P +V G      ++S+  G  H   + 
Sbjct: 311 SLVLLDDGGVFAWG--LNSQGQLGIGTTADSPLPVRVRGLGA---VTSLAAGTQHAVVLR 365

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
           + G L+T+G G  G LGHG       P  V  L  + +V  + G +H+ A          
Sbjct: 366 ADGTLWTWGHGATGQLGHGSSERMLSPEVVTRLSNVASV--ASGSFHSVAA--------- 414

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK-VSDDISFCKVACGHSITIALTATG 538
              LS   ++TWG    GQLG G    R +P+ V  +S  +S    A GH  + AL + G
Sbjct: 415 ---LSDGSVWTWGRNTNGQLGDGTTTERHLPVRVPGLSGVVSVS--ASGHH-SFALRSDG 468

Query: 539 QVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
            V+  G    GQ+G   +  +  P R+EG      ++ +A G  H+  + +   V+TWG 
Sbjct: 469 TVWGWGRNAQGQMGDGTTKDRASPARVEG---LSSVKALASGGSHMVALRTDGTVWTWGY 525

Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
              GQLG G   +++ P  V  L    V SV  G+ F+ A+
Sbjct: 526 NGAGQLGDGTTTDRRAPVQVTGL--SGVTSVAAGAYFSLAL 564



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 152/335 (45%), Gaps = 27/335 (8%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           P  ++ T +  A+++A     ++++   G +F+WG  S G+LG G  AD   P  +  L 
Sbjct: 290 PSPVQVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGTTADSPLPVRVRGLG 349

Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
              +  +A G  H   +   G L+TWG G    G LG  S      P  V+ ++    ++
Sbjct: 350 --AVTSLAAGTQHAVVLRADGTLWTWGHGA--TGQLGHGSSERMLSPEVVT-RLS--NVA 402

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
           S+  G +H+ A  S G ++T+G  T G LG G  +   +P  V  L  + +V AS    H
Sbjct: 403 SVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLPVRVPGLSGVVSVSASGH--H 460

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           + A+             S   ++ WG  A+GQ+G G  + R  P   +V    S   +A 
Sbjct: 461 SFAL------------RSDGTVWGWGRNAQGQMGDGTTKDRASP--ARVEGLSSVKALAS 506

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAV 585
           G S  +AL   G V++ G    GQLG   +T +  P ++ G      +  +A G+Y    
Sbjct: 507 GGSHMVALRTDGTVWTWGYNGAGQLGDGTTTDRRAPVQVTG---LSGVTSVAAGAYFSLA 563

Query: 586 VSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
           + +   V+ WG G  GQLG G    + +P  V  L
Sbjct: 564 LRTDGTVWAWGDGFEGQLGDGAGVQRASPVQVTGL 598



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 154/350 (44%), Gaps = 34/350 (9%)

Query: 295  VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM-- 352
            +L+A   + G +H++ +    +  SWG    G+LG   E+  S   +   L  S + +  
Sbjct: 1048 LLNAVETSAGEQHSLALLGDERALSWGSHEYGQLGD-AESGPSLEPVGVKLPSSKVLVPA 1106

Query: 353  --VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICC 410
              V+    H  A+   G + TWG   +  G LG  +  S   P  V+G    + ++    
Sbjct: 1107 VSVSAWHQHAAALLADGTVQTWGG--NADGQLGDGTTESRATPITVAGLGAMVAVAPAAR 1164

Query: 411  GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
               HT A+ S G ++ +GD TFG LG G  +  ++P +V  L+++  + A  G +H+ A+
Sbjct: 1165 ---HTLALRSDGTVWAWGDNTFGQLGDGSNTRRTLPVQVVGLEKVTAIAA--GSYHSLAV 1219

Query: 471  VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
             E               ++ WG    GQLG G  + R VP  +   D      VA G   
Sbjct: 1220 RE------------DGTVWAWGYNVFGQLGDGTMDARAVPTRMLGLD--GAVAVAGGEYH 1265

Query: 531  TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSS 588
            ++ L   G +++ G+  +GQLG     G F  R+     ++   +  +  G YH   +  
Sbjct: 1266 SLMLRFDGTLWATGNNSHGQLGE----GTFTNRLSPFQVVELDQVRTVRAGGYHSVALRE 1321

Query: 589  KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
               V+TWG    GQLG G    ++ P  V  L    + SV  G++ T A+
Sbjct: 1322 DGTVWTWGHNGQGQLGDGTVTTRRVPAPVPGL--TAIASVGAGTSHTFAV 1369



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 142/322 (44%), Gaps = 29/322 (9%)

Query: 301  IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
            ++ G  H++LV   G + +WG+ + G+LG G     + P L  A N       + G  H+
Sbjct: 754  LSAGRAHSLLVRADGTVLAWGQNTSGQLGDGSTTHRASPVL--ARNLPCARAASAGRQHS 811

Query: 361  CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ-ISSICCGPWHTAAIT 419
              +   G +++WG   ++ G LG     S   P KV    EGL  + ++  G   +  + 
Sbjct: 812  LVLACDGTVWSWGG--NSQGQLGDGGVTSRAYPAKV----EGLWGVVAVLAGGDSSMVLR 865

Query: 420  SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT-VMASCGVWHTAAIVEVAGKTS 478
            + G ++T+G    G LG G     + P EV+ L  + T VM      H   + +      
Sbjct: 866  ADGTVWTWGANGSGQLGDGTLGDRASPLEVKGLAGIATGVMGEA---HALVVSQ------ 916

Query: 479  GSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
                     ++ WG    GQLG G       P  V+V+   +   V+ G + ++A+   G
Sbjct: 917  ------DGTVWAWGANGRGQLGDGTTTSSASP--VRVAGLSAAMNVSVGQAYSLAVLPDG 968

Query: 539  QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
             V+S G+ D GQLG   +  +   +   ++    ++ +  G++H+  V     V+ WG  
Sbjct: 969  TVWSWGANDSGQLGDGTNVARTTPKPVQDLAD--VKAVTAGAHHVVAVRHDGTVWGWGAN 1026

Query: 599  ANGQLGHGDNENKQTPTLVEAL 620
            A GQ+G G +  +  P  VE L
Sbjct: 1027 AFGQVGDGTHFWRFRPVRVEGL 1048



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 175/393 (44%), Gaps = 53/393 (13%)

Query: 224 STADS---FRISLSSAVSSSSQGSCHED-FDGLGDVFIWGEG----LGNGLLGGAVNGVE 275
           +TADS    R+    AV+S + G+ H       G ++ WG G    LG+G          
Sbjct: 335 TTADSPLPVRVRGLGAVTSLAAGTQHAVVLRADGTLWTWGHGATGQLGHG---------- 384

Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
             S++R   L P+V+  T + +  S+A GS H+V     G +++WG  + G+LG G   +
Sbjct: 385 --SSERM--LSPEVV--TRLSNVASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTE 438

Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRK 395
              P  +  L+G  +  V+    H+ A+   G ++ WG      G +G  +      P +
Sbjct: 439 RHLPVRVPGLSG--VVSVSASGHHSFALRSDGTVWGWGRNAQ--GQMGDGTTKDRASPAR 494

Query: 396 VSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           V    EGL  + ++  G  H  A+ + G ++T+G    G LG G  +    P +V  L  
Sbjct: 495 V----EGLSSVKALASGGSHMVALRTDGTVWTWGYNGAGQLGDGTTTDRRAPVQVTGLSG 550

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
           + +V A        A   +A +T G+       ++ WGDG EGQLG G    R  P  V+
Sbjct: 551 VTSVAA-------GAYFSLALRTDGT-------VWAWGDGFEGQLGDGAGVQRASP--VQ 594

Query: 515 VSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYI 573
           V+      K+A G +  +A+   G V++ G    GQ+G    + +F   ++ G      +
Sbjct: 595 VTGLTRVVKLAAGAAHGLAVRDDGTVWAWGDNTEGQMGDGSWSDRFRAVQVYGLTG---V 651

Query: 574 EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
             +  G YH   ++    +  WG  A GQ G G
Sbjct: 652 SSVVGGLYHSMALAQDGTLRAWGGNAYGQFGDG 684



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 153/374 (40%), Gaps = 72/374 (19%)

Query: 298  AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL------------ 345
            A++ + G +H++++   G ++SWG  S G+LG G     +YP  ++ L            
Sbjct: 801  ARAASAGRQHSLVLACDGTVWSWGGNSQGQLGDGGVTSRAYPAKVEGLWGVVAVLAGGDS 860

Query: 346  ---------------NGS---------------------NIHMVACGEFHTCAVTLSGDL 369
                           NGS                      I     GE H   V+  G +
Sbjct: 861  SMVLRADGTVWTWGANGSGQLGDGTLGDRASPLEVKGLAGIATGVMGEAHALVVSQDGTV 920

Query: 370  YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
            + W  G +  G LG  +  S   P +V+G    + +S    G  ++ A+   G ++++G 
Sbjct: 921  WAW--GANGRGQLGDGTTTSSASPVRVAGLSAAMNVS---VGQAYSLAVLPDGTVWSWGA 975

Query: 430  GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
               G LG G   + + P+ V+ L ++K V A  G  H  A+                 ++
Sbjct: 976  NDSGQLGDGTNVARTTPKPVQDLADVKAVTA--GAHHVVAVRH------------DGTVW 1021

Query: 490  TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
             WG  A GQ+G G    R  P  V+V   ++  + + G   ++AL    +  S GS +YG
Sbjct: 1022 GWGANAFGQVGDGTHFWRFRP--VRVEGLLNAVETSAGEQHSLALLGDERALSWGSHEYG 1079

Query: 550  QLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSY--HIAVVSSKSEVYTWGKGANGQLGHG 606
            QLG   S     P  ++       +  ++  ++  H A + +   V TWG  A+GQLG G
Sbjct: 1080 QLGDAESGPSLEPVGVKLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLGDG 1139

Query: 607  DNENKQTPTLVEAL 620
              E++ TP  V  L
Sbjct: 1140 TTESRATPITVAGL 1153



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 145/367 (39%), Gaps = 53/367 (14%)

Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           V   G +++WG+ + G++G G  +D      +  L G  +  V  G +H+ A+   G L 
Sbjct: 614 VRDDGTVWAWGDNTEGQMGDGSWSDRFRAVQVYGLTG--VSSVVGGLYHSMALAQDGTLR 671

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ-ISSICCGPWHTAAITSAGKLFTFGD 429
            WG   +     G V+      PR V+G + GL  I  +     H  A+   G L T+G 
Sbjct: 672 AWGGNAYGQFGDGGVT------PRVVAGAVPGLSGIKLLGASYLHVLAVREDGMLLTWGY 725

Query: 430 GTFGALGHGDRSSTSVPREVETLKELKTVMA----SCGVWHTAAIVEVAGKTSGSNGLSS 485
             FG LG G    +S+P +V  L + + + A    S  V     ++     TSG  G  S
Sbjct: 726 NRFGQLGLGAAGWSSLPVQVRGLGQGRRLSAGRAHSLLVRADGTVLAWGQNTSGQLGDGS 785

Query: 486 KK--------------------------------LFTWGDGAEGQLGHGDAEPRVVPLCV 513
                                             +++WG  ++GQLG G    R  P   
Sbjct: 786 TTHRASPVLARNLPCARAASAGRQHSLVLACDGTVWSWGGNSQGQLGDGGVTSRAYP--A 843

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY- 572
           KV        V  G   ++ L A G V++ G+   GQLG  G+ G   + +E  +K    
Sbjct: 844 KVEGLWGVVAVLAGGDSSMVLRADGTVWTWGANGSGQLGD-GTLGDRASPLE--VKGLAG 900

Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
           I     G  H  VVS    V+ WG    GQLG G   +  +P  V  L      +V  G 
Sbjct: 901 IATGVMGEAHALVVSQDGTVWAWGANGRGQLGDGTTTSSASPVRVAGL--SAAMNVSVGQ 958

Query: 633 NFTAAIC 639
            ++ A+ 
Sbjct: 959 AYSLAVL 965



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 146/333 (43%), Gaps = 29/333 (8%)

Query: 307  HAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLS 366
            H + V + G + +WG    G+LG G     S P  +  L       ++ G  H+  V   
Sbjct: 710  HVLAVREDGMLLTWGYNRFGQLGLGAAGWSSLPVQVRGLG--QGRRLSAGRAHSLLVRAD 767

Query: 367  GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
            G +  WG   +  G LG  S  +H     ++  +   + +S   G  H+  +   G +++
Sbjct: 768  GTVLAWGQ--NTSGQLGDGST-THRASPVLARNLPCARAAS--AGRQHSLVLACDGTVWS 822

Query: 427  FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
            +G  + G LG G  +S + P +VE            G+W   A++  AG  S     +  
Sbjct: 823  WGGNSQGQLGDGGVTSRAYPAKVE------------GLWGVVAVL--AGGDSSMVLRADG 868

Query: 487  KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
             ++TWG    GQLG G    R  PL VK    I+   +   H++ +  +  G V++ G+ 
Sbjct: 869  TVWTWGANGSGQLGDGTLGDRASPLEVKGLAGIATGVMGEAHALVV--SQDGTVWAWGAN 926

Query: 547  DYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
              GQLG   +T    P R+ G        +++ G  +   V     V++WG   +GQLG 
Sbjct: 927  GRGQLGDGTTTSSASPVRVAG---LSAAMNVSVGQAYSLAVLPDGTVWSWGANDSGQLGD 983

Query: 606  GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            G N  + TP  V+ L D  VK+V  G++   A+
Sbjct: 984  GTNVARTTPKPVQDLAD--VKAVTAGAHHVVAV 1014



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 25/219 (11%)

Query: 298  AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            A ++A G  H++++   G +++ G  S G+LG G   +   P  +  L+   +  V  G 
Sbjct: 1256 AVAVAGGEYHSLMLRFDGTLWATGNNSHGQLGEGTFTNRLSPFQVVELD--QVRTVRAGG 1313

Query: 358  FHTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
            +H+ A+   G ++TWG   HN  G LG  +  +  +P  V G      I+S+  G  HT 
Sbjct: 1314 YHSVALREDGTVWTWG---HNGQGQLGDGTVTTRRVPAPVPGLTA---IASVGAGTSHTF 1367

Query: 417  AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
            A+ S  + + +G  + G LG GD S    P  V+ L  +K+V+A              G 
Sbjct: 1368 AVGS--ETWAWGRNSHGQLGTGDSSDRLEPTLVKGLHGVKSVLA-------------GGD 1412

Query: 477  TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
             S + G     + +WG    G LG G    R VP  V +
Sbjct: 1413 FSVAQGADGSAM-SWGTNVHGTLGIGLPGQRTVPGAVTL 1450


>gi|332848168|ref|XP_511801.3| PREDICTED: serine/threonine-protein kinase Nek8 [Pan troglodytes]
          Length = 646

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 165/406 (40%), Gaps = 59/406 (14%)

Query: 259 GEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIF 318
           GEG G     G+  G  +S    +          T  +  + I  G     +      ++
Sbjct: 210 GEGYGVWAPSGSTGGPHLSCRAEKSVAPSSTGSRTTSVRCRGIPRGPVRPAIPPPLSSVY 269

Query: 319 SWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW-----G 373
           +WG G G             P  +  LN + +  VA G      VT SG L  W     G
Sbjct: 270 AWGGGLG------------TPLRLPMLN-TEVVQVAAGRTQKAGVTRSGRLILWEAPPLG 316

Query: 374 DGIHNLGLLGQVSEIS-HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
            G  +L L G V +    +I R + GQ  G+ I  + CG + TA +T  G + TFG G+ 
Sbjct: 317 AGGGSL-LPGAVEQPQPQFISRFLEGQ-SGVTIKHVACGDFFTACLTDRGIIMTFGSGSN 374

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           G LGHG  +  S P  VE L   + V  +CG  H  A+             + ++LF WG
Sbjct: 375 GCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALS------------TERELFAWG 422

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
            G  G+LG G  E    P  V +       +V CG   ++ LT  GQ  + GS  + +LG
Sbjct: 423 RGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLG 482

Query: 553 SPG-STGKFPTRIEGNIKHRYIED-------------------IACGSYHIAVVSSKSEV 592
               S G+ P      + H+ +E+                   I  G+ H A V++  + 
Sbjct: 483 LDHLSLGEEP------VPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDC 536

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           YT+G   +GQLG       + P  V+ L   ++  V CG  FT AI
Sbjct: 537 YTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAI 582



 Score =  112 bits (281), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 154/349 (44%), Gaps = 21/349 (6%)

Query: 253 GDVFIW-----GEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
           G + +W     G G G  LL GAV          +   + + LE    +  + +ACG   
Sbjct: 305 GRLILWEAPPLGAG-GGSLLPGAVE-------QPQPQFISRFLEGQSGVTIKHVACGDFF 356

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
              +T +G I ++G GS G LGHG   D+S P +++AL G  +  VACG  H  A++   
Sbjct: 357 TACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTER 416

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           +L+ WG G  + G LG  +  SH  P++V     G +   + CG   +  +T  G+    
Sbjct: 417 ELFAWGRG--DSGRLGLGTRESHSCPQQVP-MPPGQEAQRVVCGIDSSMILTVPGQALAC 473

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELK--TVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
           G   F  LG    S    P   + ++E    T++ S  +     +    G    +   +S
Sbjct: 474 GSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTAS 533

Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
              +T+G    GQLG         P  V+  + I    VACG + T+A+ A G+V+S G 
Sbjct: 534 GDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAEGEVYSWGK 593

Query: 546 ADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIAC--GSYHIAVVSSKSE 591
              G+LG        P  ++ +  H Y +  ++C  G+  +AV S   E
Sbjct: 594 GARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSCCHGNTLLAVRSVTDE 642



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 175/397 (44%), Gaps = 52/397 (13%)

Query: 252 LGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           L  V+ WG GLG  L                   LP +L + VV     +A G      V
Sbjct: 265 LSSVYAWGGGLGTPLR------------------LP-MLNTEVV----QVAAGRTQKAGV 301

Query: 312 TKQGQIFSW-----GEGSGGKLGHGVEADVS--YPKLIDALNGSNIHMVACGEFHTCAVT 364
           T+ G++  W     G G G  L   VE        + ++  +G  I  VACG+F T  +T
Sbjct: 302 TRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVTIKHVACGDFFTACLT 361

Query: 365 LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
             G + T+G G +     G +++IS   P  V   + G ++  + CG  H  A+++  +L
Sbjct: 362 DRGIIMTFGSGSNGCLGHGSLTDISQ--PTIVEALL-GYEMVQVACGASHVLALSTEREL 418

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT--SGSNG 482
           F +G G  G LG G R S S P++V      +     CG+  ++ I+ V G+    GSN 
Sbjct: 419 FAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGI-DSSMILTVPGQALACGSNR 477

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRV-------VPLCVKVSDDISFCKVACGHSITIALT 535
            +   L     G E  + H   E  +        PL     D      +  G + + A+T
Sbjct: 478 FNKLGLDHLSLGEE-PVPHQQVEEALSFTLLGSAPL-----DQEPLLSIDLGTAHSAAVT 531

Query: 536 ATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
           A+G  ++ GS  +GQLG+    G + P +++G ++   +  +ACG      + ++ EVY+
Sbjct: 532 ASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQG-LEGIKMAMVACGDAFTVAIGAEGEVYS 590

Query: 595 WGKGANGQLGHGDNE-NKQTPTLVEALRDKQVKSVVC 630
           WGKGA G+LG  D +     P  ++      V SV C
Sbjct: 591 WGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSC 627


>gi|222636984|gb|EEE67116.1| hypothetical protein OsJ_24138 [Oryza sativa Japonica Group]
          Length = 484

 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 150/337 (44%), Gaps = 24/337 (7%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGEF 358
           +I+    HA  VT+ G++F+ G+ S    GHG V   +  P  I AL G +   VA G  
Sbjct: 159 NISASHNHAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLS 218

Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ-ISSICCGPWHTAA 417
            T  +T  G +YT G   H  G LG    I    P+ V    EGL  +  +  G  +T A
Sbjct: 219 FTVILTTDGQVYTCGSNTH--GQLGHGDTIDRATPKIVE-LFEGLAPVVQVAAGASYTFA 275

Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAG 475
           +T  G +++FG  T   LGHGD+     PR +++ K   +  V  S G  H  A+  +  
Sbjct: 276 VTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALG- 334

Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
                       ++TWG G  G LGHGD   +  P  +         +V      T  LT
Sbjct: 335 -----------YVYTWGRGYCGALGHGDENDKTSPELISSLKSQVAVQVCARKRKTFVLT 383

Query: 536 ATGQVFSMGSADYGQLGSP--GSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
             G VF+ G   +G LG P  GS+ K    R+  +++  Y+  I+ G YH   V+++  V
Sbjct: 384 DEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYVSQISTGLYHTVAVTNRGIV 443

Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVV 629
           + +G     QLG         PT  E +  K ++ +V
Sbjct: 444 FGFGDNERAQLGQEYIRGCLKPT--EIMFQKSMEEIV 478



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 106/221 (47%), Gaps = 17/221 (7%)

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIVE 472
           H A +T  G++FT GD +    GHG+   T   P E++ LK +     + G+  T  +  
Sbjct: 166 HAAFVTELGEVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVATGLSFTVILT- 224

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS-FCKVACGHSIT 531
                      +  +++T G    GQLGHGD   R  P  V++ + ++   +VA G S T
Sbjct: 225 -----------TDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYT 273

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHR--YIEDIACGSYHIAVVSSK 589
            A+T  G V+S GS     LG      +   R   + K R  ++  ++ G  H   + + 
Sbjct: 274 FAVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDAL 333

Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
             VYTWG+G  G LGHGD  +K +P L+ +L+  QV   VC
Sbjct: 334 GYVYTWGRGYCGALGHGDENDKTSPELISSLK-SQVAVQVC 373



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 149/331 (45%), Gaps = 38/331 (11%)

Query: 232 SLSSAVSSSSQGSCHEDFDGLGDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLP 287
           SLS  V+ S+  +       LG+VF  G+      G+G +G             R    P
Sbjct: 153 SLSRVVNISASHNHAAFVTELGEVFTCGDNSSLCCGHGEVG-------------RTIFRP 199

Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
             +++   +  + +A G    V++T  GQ+++ G  + G+LGHG   D + PK+++   G
Sbjct: 200 TEIKALKGISCKQVATGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEG 259

Query: 348 -SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV-SGQMEGLQI 405
            + +  VA G  +T AVT  G +Y++G   +    LG   +     PR + S +   + +
Sbjct: 260 LAPVVQVAAGASYTFAVTDDGTVYSFGSCTNF--CLGHGDQHDELRPRAIQSFKRRNIHV 317

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
             +  G  H  A+ + G ++T+G G  GALGHGD +  + P  + +LK            
Sbjct: 318 VRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDENDKTSPELISSLK------------ 365

Query: 466 HTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLG---HGDAEPRVVPLCVKVSDDISF 521
            +   V+V  +   +  L+ +  +F +G    G LG    G ++  + P  +    D   
Sbjct: 366 -SQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMRPRVLDSLRDHYV 424

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLG 552
            +++ G   T+A+T  G VF  G  +  QLG
Sbjct: 425 SQISTGLYHTVAVTNRGIVFGFGDNERAQLG 455



 Score = 72.0 bits (175), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 4/187 (2%)

Query: 276 ISSADRRDALLPKVLESTVV--LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
           +   D+ D L P+ ++S     +    ++ G +HAV +   G +++WG G  G LGHG E
Sbjct: 293 LGHGDQHDELRPRAIQSFKRRNIHVVRVSAGDEHAVALDALGYVYTWGRGYCGALGHGDE 352

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWI 392
            D + P+LI +L       V   +  T  +T  G ++ +G  G  +LG   + S      
Sbjct: 353 NDKTSPELISSLKSQVAVQVCARKRKTFVLTDEGSVFAFGWMGFGSLGFPDRGSSDKVMR 412

Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
           PR V   +    +S I  G +HT A+T+ G +F FGD     LG         P E+   
Sbjct: 413 PR-VLDSLRDHYVSQISTGLYHTVAVTNRGIVFGFGDNERAQLGQEYIRGCLKPTEIMFQ 471

Query: 453 KELKTVM 459
           K ++ ++
Sbjct: 472 KSMEEIV 478



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 100/224 (44%), Gaps = 16/224 (7%)

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWH 466
           +  G +HT  +  +  +++ G    G LGHG D +  +    V      + V  S    H
Sbjct: 108 VATGRYHTLLVHDS-SVYSCGSSLCGVLGHGPDTTQCAAFSRVPFPSLSRVVNISASHNH 166

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVV-PLCVKVSDDISFCKVA 525
            A + E+             ++FT GD +    GHG+    +  P  +K    IS  +VA
Sbjct: 167 AAFVTELG------------EVFTCGDNSSLCCGHGEVGRTIFRPTEIKALKGISCKQVA 214

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIA 584
            G S T+ LT  GQV++ GS  +GQLG   +  +  P  +E       +  +A G+ +  
Sbjct: 215 TGLSFTVILTTDGQVYTCGSNTHGQLGHGDTIDRATPKIVELFEGLAPVVQVAAGASYTF 274

Query: 585 VVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSV 628
            V+    VY++G   N  LGHGD  ++  P  +++ + + +  V
Sbjct: 275 AVTDDGTVYSFGSCTNFCLGHGDQHDELRPRAIQSFKRRNIHVV 318


>gi|302810693|ref|XP_002987037.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
 gi|300145202|gb|EFJ11880.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
          Length = 228

 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 120/214 (56%), Gaps = 15/214 (7%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
           LP+ L  +  L    +ACGS H + +T  G ++S+G+G+ G LGHG     S P ++D+L
Sbjct: 25  LPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQGTFGALGHGTTESCSSPVIVDSL 84

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
            G  I  +ACG+ H+CA+T+ G L++WG G +  G LG  S  +H  P  V+   + L +
Sbjct: 85  WGLGIVQIACGDNHSCALTVEGQLFSWGRGKY--GQLGCGSVENHLQPVPVTALSDRL-L 141

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
           + + CG  +T AI S G+LF++G G +G  GHG + +  VP+ V +L+    V AS G  
Sbjct: 142 TQVVCGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLENDNIVQASAGAR 201

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQL 499
           H  A+      TSG        ++ WGD  +GQ+
Sbjct: 202 HAVAL------TSGGG------VYAWGDNEQGQV 223



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 114/236 (48%), Gaps = 14/236 (5%)

Query: 369 LYTWGDG-IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           L +WG G    LGL       +  +PR + G  E L    + CG  HT A+T +G +++F
Sbjct: 1   LVSWGCGEFGQLGLKDAAGVFTSPLPRFLRGSRE-LLFVRVACGSSHTLALTGSGDVYSF 59

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           G GTFGALGHG   S S P  V++L  L  V  +CG  H+ A+                +
Sbjct: 60  GQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALT------------VEGQ 107

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
           LF+WG G  GQLG G  E  + P+ V    D    +V CG   T+A+ + GQ+FS G   
Sbjct: 108 LFSWGRGKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGH 167

Query: 548 YGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
           +GQ G          ++  ++++  I   + G+ H   ++S   VY WG    GQ+
Sbjct: 168 WGQTGHGTQDNILVPKLVCSLENDNIVQASAGARHAVALTSGGGVYAWGDNEQGQV 223



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 103/224 (45%), Gaps = 15/224 (6%)

Query: 424 LFTFGDGTFGALGHGDRS---STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
           L ++G G FG LG  D +   ++ +PR +   +EL  V  +CG  HT A+          
Sbjct: 1   LVSWGCGEFGQLGLKDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALT--------- 51

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
               S  ++++G G  G LGHG  E    P+ V     +   ++ACG + + ALT  GQ+
Sbjct: 52  ---GSGDVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALTVEGQL 108

Query: 541 FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
           FS G   YGQLG               +  R +  + CG+ +   + S  ++++WG G  
Sbjct: 109 FSWGRGKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHGHW 168

Query: 601 GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
           GQ GHG  +N   P LV +L +  +     G+    A+    GV
Sbjct: 169 GQTGHGTQDNILVPKLVCSLENDNIVQASAGARHAVALTSGGGV 212


>gi|30039692|ref|NP_835464.1| serine/threonine-protein kinase Nek8 [Homo sapiens]
 gi|34098463|sp|Q86SG6.1|NEK8_HUMAN RecName: Full=Serine/threonine-protein kinase Nek8; AltName:
           Full=Never in mitosis A-related kinase 8;
           Short=NimA-related protein kinase 8; AltName:
           Full=Nima-related protein kinase 12a
 gi|29826090|gb|AAO88243.1| NIMA-related kinase 12a [Homo sapiens]
 gi|30026015|gb|AAP04006.1| NIMA-family kinase NEK8 [Homo sapiens]
 gi|85567283|gb|AAI12241.1| NIMA-related kinase 8 [Homo sapiens]
 gi|109731802|gb|AAI13706.1| NIMA (never in mitosis gene a)- related kinase 8 [Homo sapiens]
 gi|119571521|gb|EAW51136.1| NIMA (never in mitosis gene a)- related kinase 8, isoform CRA_b
           [Homo sapiens]
 gi|313883230|gb|ADR83101.1| NIMA (never in mitosis gene a)- related kinase 8 [synthetic
           construct]
          Length = 692

 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 149/348 (42%), Gaps = 59/348 (16%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW---- 372
           +++WG G G             P  +  LN + +  VA G      VT SG L  W    
Sbjct: 314 VYAWGGGLG------------TPLRLPMLN-TEVVQVAAGRTQKAGVTRSGRLILWEAPP 360

Query: 373 -GDGIHNLGLLGQVSEIS-HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            G G  +L L G V +    +I R + GQ  G+ I  + CG + TA +T  G + TFG G
Sbjct: 361 LGAGGGSL-LPGAVEQPQPQFISRFLEGQ-SGVTIKHVACGDFFTACLTDRGIIMTFGSG 418

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
           + G LGHG  +  S P  VE L   + V  +CG  H  A+             + ++LF 
Sbjct: 419 SNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALS------------TERELFA 466

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG G  G+LG G  E    P  V +       +V CG   ++ LT  GQ  + GS  + +
Sbjct: 467 WGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNK 526

Query: 551 LGSPG-STGKFPTRIEGNIKHRYIED-------------------IACGSYHIAVVSSKS 590
           LG    S G+ P      + H+ +E+                   I  G+ H A V++  
Sbjct: 527 LGLDHLSLGEEP------VPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASG 580

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + YT+G   +GQLG       + P  V+ L   ++  V CG  FT AI
Sbjct: 581 DCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAI 628



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 176/397 (44%), Gaps = 52/397 (13%)

Query: 252 LGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           L  V+ WG GLG  L                   LP +L + VV     +A G      V
Sbjct: 311 LSSVYAWGGGLGTPLR------------------LP-MLNTEVV----QVAAGRTQKAGV 347

Query: 312 TKQGQIFSW-----GEGSGGKLGHGVEADVS--YPKLIDALNGSNIHMVACGEFHTCAVT 364
           T+ G++  W     G G G  L   VE        + ++  +G  I  VACG+F T  +T
Sbjct: 348 TRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVTIKHVACGDFFTACLT 407

Query: 365 LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
             G + T+G G +     G +++IS   P  V   + G ++  + CG  H  A+++  +L
Sbjct: 408 DRGIIMTFGSGSNGCLGHGSLTDISQ--PTIVEALL-GYEMVQVACGASHVLALSTEREL 464

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT--SGSNG 482
           F +G G  G LG G R S S P++V      +     CG+  ++ I+ V G+    GSN 
Sbjct: 465 FAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGI-DSSMILTVPGQALACGSNR 523

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRV-------VPLCVKVSDDISFCKVACGHSITIALT 535
            +   L     G E  + H   E  +        PL     D      +  G + + A+T
Sbjct: 524 FNKLGLDHLSLGEE-PVPHQQVEEALSFTLLGSAPL-----DQEPLLSIDLGTAHSAAVT 577

Query: 536 ATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
           A+G  ++ GS  +GQLG+    G + P +++G ++   +  +ACG      + ++SEVY+
Sbjct: 578 ASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQG-LEGIKMAMVACGDAFTVAIGAESEVYS 636

Query: 595 WGKGANGQLGHGDNE-NKQTPTLVEALRDKQVKSVVC 630
           WGKGA G+LG  D +     P  ++      V SV C
Sbjct: 637 WGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSC 673



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 154/350 (44%), Gaps = 23/350 (6%)

Query: 253 GDVFIW-----GEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
           G + +W     G G G  LL GAV          +   + + LE    +  + +ACG   
Sbjct: 351 GRLILWEAPPLGAG-GGSLLPGAVE-------QPQPQFISRFLEGQSGVTIKHVACGDFF 402

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
              +T +G I ++G GS G LGHG   D+S P +++AL G  +  VACG  H  A++   
Sbjct: 403 TACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTER 462

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           +L+ WG G  + G LG  +  SH  P++V     G +   + CG   +  +T  G+    
Sbjct: 463 ELFAWGRG--DSGRLGLGTRESHSCPQQVP-MPPGQEAQRVVCGIDSSMILTVPGQALAC 519

Query: 428 GDGTFGALG--HGDRSSTSVP-REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           G   F  LG  H       VP ++VE      T++ S  +     +    G    +   +
Sbjct: 520 GSNRFNKLGLDHLSLGEEPVPHQQVEEALSF-TLLGSAPLDQEPLLSIDLGTAHSAAVTA 578

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
           S   +T+G    GQLG         P  V+  + I    VACG + T+A+ A  +V+S G
Sbjct: 579 SGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWG 638

Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIAC--GSYHIAVVSSKSE 591
               G+LG        P  ++ +  H Y +  ++C  G+  +AV S   E
Sbjct: 639 KGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSCCHGNTLLAVRSVTDE 688


>gi|432098306|gb|ELK28108.1| X-linked retinitis pigmentosa GTPase regulator, partial [Myotis
           davidii]
          Length = 1369

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 161/347 (46%), Gaps = 45/347 (12%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           +ACG +H  ++T   +++ +G    G+LG G ++ V  P  + AL    +  VACG  HT
Sbjct: 34  LACGDEHTAVITGNKKLYMFGRNDWGQLGLGSKSAVCKPTCVKALKPEKVKHVACGRNHT 93

Query: 361 CAVTLSGDLYTWGDGIHNLGLLG----QVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
              T  G +Y  G   +N G LG    +     H I    S      Q   +  G   +A
Sbjct: 94  LVSTEGGKVYAVGG--NNEGQLGLGDTEDRNTFHLIEFFTSQH----QFKQLSAGSNTSA 147

Query: 417 AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           A+T  GKLF +G+ + G +G  +  +   P EV   K +  +  SCG +H +A V + G 
Sbjct: 148 ALTEDGKLFMWGENSEGQIGLNNVCNVYFPHEVTVGKPIAWI--SCGYYH-SAFVTMEG- 203

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLG------HGDAEPRVVP-LCVKVSDDISFCKVACGHS 529
                     +L+T+G+   G+LG           P++VP +  KV       +VACG  
Sbjct: 204 ----------ELYTFGEPEFGKLGLPKQLLMNHKVPQLVPGIPEKV------IQVACGGG 247

Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKFPT---RIEGNIKHRYIEDIACGSYHIAVV 586
            T+ LT    V++ G   +GQLG    T  F T   +I  ++K   I  I+CG  H A++
Sbjct: 248 HTVVLTEKA-VYNFGLGQFGQLGL--GTFVFETTEPKIMESVKDHKITYISCGENHTALI 304

Query: 587 SSKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
           +    +YT+G G  G+LG G  +  N+  PTL       +V  V CG
Sbjct: 305 TDIGRMYTFGDGRYGKLGLGMENFTNQFVPTLCPNFLRFKVHLVACG 351



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 112/206 (54%), Gaps = 20/206 (9%)

Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
           + ++ GS  +  +T+ G++F WGE S G++G     +V +P  +    G  I  ++CG +
Sbjct: 137 KQLSAGSNTSAALTEDGKLFMWGENSEGQIGLNNVCNVYFPHEVTV--GKPIAWISCGYY 194

Query: 359 HTCAVTLSGDLYTWGDG-IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
           H+  VT+ G+LYT+G+     LGL  Q+  ++H +P+ V G  E  ++  + CG  HT  
Sbjct: 195 HSAFVTMEGELYTFGEPEFGKLGLPKQLL-MNHKVPQLVPGIPE--KVIQVACGGGHTVV 251

Query: 418 ITSAGKLFTFGDGTFGALGHGDRS-STSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           +T    ++ FG G FG LG G     T+ P+ +E++K+ K    SCG  HTA I ++   
Sbjct: 252 LTEKA-VYNFGLGQFGQLGLGTFVFETTEPKIMESVKDHKITYISCGENHTALITDIG-- 308

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHG 502
                     +++T+GDG  G+LG G
Sbjct: 309 ----------RMYTFGDGRYGKLGLG 324



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 107/222 (48%), Gaps = 20/222 (9%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G +F+WGE    G +G  +N V        +   P   E TV      I+CG  H+  VT
Sbjct: 153 GKLFMWGEN-SEGQIG--LNNV-------CNVYFPH--EVTVGKPIAWISCGYYHSAFVT 200

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
            +G+++++GE   GKLG   +  +++  P+L+  +    I  VACG  HT  +T    +Y
Sbjct: 201 MEGELYTFGEPEFGKLGLPKQLLMNHKVPQLVPGIPEKVIQ-VACGGGHTVVLTEKA-VY 258

Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            +G G    G LG  + +      K+   ++  +I+ I CG  HTA IT  G+++TFGDG
Sbjct: 259 NFGLG--QFGQLGLGTFVFETTEPKIMESVKDHKITYISCGENHTALITDIGRMYTFGDG 316

Query: 431 TFGALGHGDRSSTS--VPREVETLKELKTVMASCGVWHTAAI 470
            +G LG G  + T+  VP         K  + +CG  H    
Sbjct: 317 RYGKLGLGMENFTNQFVPTLCPNFLRFKVHLVACGGCHMVVF 358



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 5/118 (4%)

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
           +ACG   T  +T   +++  G  D+GQLG  S  +  K PT ++  +K   ++ +ACG  
Sbjct: 34  LACGDEHTAVITGNKKLYMFGRNDWGQLGLGSKSAVCK-PTCVKA-LKPEKVKHVACGRN 91

Query: 582 HIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDK-QVKSVVCGSNFTAAI 638
           H  V +   +VY  G    GQLG GD E++ T  L+E    + Q K +  GSN +AA+
Sbjct: 92  HTLVSTEGGKVYAVGGNNEGQLGLGDTEDRNTFHLIEFFTSQHQFKQLSAGSNTSAAL 149



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 10/102 (9%)

Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
            T +G VF+ G   + +     +  KF        K+     +ACG  H AV++   ++Y
Sbjct: 2   FTDSGAVFTFGKTKFAE----NTPSKF------WFKNDIPTFLACGDEHTAVITGNKKLY 51

Query: 594 TWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
            +G+   GQLG G       PT V+AL+ ++VK V CG N T
Sbjct: 52  MFGRNDWGQLGLGSKSAVCKPTCVKALKPEKVKHVACGRNHT 93


>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
 gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Rattus norvegicus]
 gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Rattus norvegicus]
          Length = 551

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 142/295 (48%), Gaps = 21/295 (7%)

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF-HTCAVTLS 366
            +  T   +IF  G    G LG G       P+ +D+L G  I  ++ G   H    T  
Sbjct: 58  VLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTD 117

Query: 367 GDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
           G+++TWG   HN    LG  +     +P  +S  +   Q+  + CG +H+  +TS G++F
Sbjct: 118 GEVFTWG---HNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174

Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVWHTAAIVEVAGKTSGSNGLS 484
            +G    G +G G  ++  +PR V    + K VM+ +CG   + A+V+            
Sbjct: 175 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVD------------ 222

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
           + +++ WG    GQLG G +  +  P  V     I   +VACG++ T+ LT  GQ+++ G
Sbjct: 223 TGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282

Query: 545 SADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSK-SEVYTWGK 597
           +  YGQLG+   + + +PT +    K R IE  AC S H +   S+   VY WG+
Sbjct: 283 ANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKSQGGHVYMWGQ 336



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 109/221 (49%), Gaps = 19/221 (8%)

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           ++F  G    G LG GD  ST  PR +++L   K    S G      +    G+      
Sbjct: 66  EIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGE------ 119

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS---FCKVACGHSITIALTATGQ 539
                +FTWG  A  QLG+G     +VP    +S ++S     +VACG   ++ LT+ G+
Sbjct: 120 -----VFTWGHNAYSQLGNGTTNHGLVP--CHISTNLSNKQVIEVACGSYHSLVLTSDGE 172

Query: 540 VFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
           VF+ G  + GQ+GS GST     P R+ G ++++ +  IACG      V    EVY WG 
Sbjct: 173 VFAWGYNNSGQVGS-GSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGY 231

Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             NGQLG G + N+ TP  V AL+  +V+ V CG   T  +
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 160/336 (47%), Gaps = 40/336 (11%)

Query: 323 GSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH----TCAVTLSGD--LYT-WGDG 375
           G  G+ G  V+A +S  K++D        + +  E       C    +G+  LYT   D 
Sbjct: 7   GFYGESGKSVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGTAGNEVLYTTVNDE 66

Query: 376 IHNLG-----LLGQVSEISHWI-PRKVSGQMEGLQISSICCGPW-HTAAITSAGKLFTFG 428
           I  LG      LG V +I   I PR++   + G +I+S+  G   H    T+ G++FT+G
Sbjct: 67  IFVLGTNCSGCLG-VGDIQSTIEPRRLD-SLTGKKIASLSYGSGPHIVLATTDGEVFTWG 124

Query: 429 DGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
              +  LG+G  +   VP  + T L   + +  +CG +H+  +             S  +
Sbjct: 125 HNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGE 172

Query: 488 LFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
           +F WG    GQ+G G       PR V  C++    +S   +ACG   ++A+  TG+V+  
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMS---IACGQMCSMAVVDTGEVYVW 229

Query: 544 GSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           G    GQLG  GS+G  PT  R+   ++   ++ +ACG  H  V++ + ++Y WG  + G
Sbjct: 230 GYNGNGQLGL-GSSGNQPTPCRVAA-LQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287

Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           QLG G+  N+  PT V   +D+ ++   C S  T+A
Sbjct: 288 QLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 323



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 127/269 (47%), Gaps = 19/269 (7%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGS-KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY 338
           D +  + P+ L+S       S++ GS  H VL T  G++F+WG  +  +LG+G       
Sbjct: 82  DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLV 141

Query: 339 PKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
           P  I   L+   +  VACG +H+  +T  G+++ WG   +N G +G  S  +  IPR+V+
Sbjct: 142 PCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG--YNNSGQVGSGSTANQPIPRRVT 199

Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
           G ++   + SI CG   + A+   G+++ +G    G LG G   +   P  V  L+ ++ 
Sbjct: 200 GCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRV 259

Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
              +CG  HT  + +              +++ WG  + GQLG G+   +  P  V V  
Sbjct: 260 QRVACGYAHTLVLTD------------EGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK 307

Query: 518 DISFCKVACGHS--ITIALTATGQVFSMG 544
           D    ++A  HS   + A +  G V+  G
Sbjct: 308 D-RIIEIAACHSAHTSAAKSQGGHVYMWG 335



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 20/174 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK----VLESTVVLDAQSIACGSKHA 308
           G+VF WG            N  ++ S    +  +P+     L++ VV+   SIACG   +
Sbjct: 171 GEVFAWGYN----------NSGQVGSGSTANQPIPRRVTGCLQNKVVM---SIACGQMCS 217

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           + V   G+++ WG    G+LG G   +   P  + AL G  +  VACG  HT  +T  G 
Sbjct: 218 MAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
           +Y W  G ++ G LG  ++ +   P  V  + + + I    C   HT+A  S G
Sbjct: 278 IYAW--GANSYGQLGTGNKSNQSYPTPVVVEKDRI-IEIAACHSAHTSAAKSQG 328


>gi|281209109|gb|EFA83284.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 853

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 133/275 (48%), Gaps = 31/275 (11%)

Query: 382 LGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS 441
           +G++ + +   P  V    + ++I  I  G  ++AA+TS G ++T+G    G LG GDR 
Sbjct: 209 VGEIVDKNQMTPVLVDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRW 268

Query: 442 STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH 501
               PR + +L     V  +CG  H AAI +            S  L+TWG G  GQLGH
Sbjct: 269 YHGNPRVIRSLSNKSIVNIACGRQHMAAISK------------SGDLYTWGLGVFGQLGH 316

Query: 502 GDAEPRVVPLCVKVSDDIS--FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG- 558
           G  +  + P  V   +       +VA G + T+A++  G++FS G  +YGQLG+   T  
Sbjct: 317 GKLKSLLHPKKVLYFEQQQKKIVQVATGANFTMAVSENGELFSFGHGEYGQLGATEDTQY 376

Query: 559 ---------------KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
                            P +++  ++   +  +ACG  H   V++ ++VYTWG G++G L
Sbjct: 377 MDWNNNGDRDDHLKYSLPKQVKA-LESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCL 435

Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           G GD + +  P  V +L  +++ SV  G   T  +
Sbjct: 436 GFGDRKFQLVPQRVPSLSGEEISSVSGGEKHTLIV 470



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 135/281 (48%), Gaps = 32/281 (11%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+ G  ++  VT  G +++WG    G+LG G       P++I +L+  +I  +ACG  H 
Sbjct: 235 ISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHGNPRVIRSLSNKSIVNIACGRQHM 294

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV-SGQMEGLQISSICCGPWHTAAIT 419
            A++ SGDLYTWG G+   G LG     S   P+KV   + +  +I  +  G   T A++
Sbjct: 295 AAISKSGDLYTWGLGV--FGQLGHGKLKSLLHPKKVLYFEQQQKKIVQVATGANFTMAVS 352

Query: 420 SAGKLFTFGDGTFGALG------------HGDRSS---TSVPREVETLKELKTVMASCGV 464
             G+LF+FG G +G LG            +GDR      S+P++V+ L+ +K    +CG 
Sbjct: 353 ENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKALESVKVRKVACGH 412

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
            HT A+             +   ++TWG G+ G LG GD + ++VP  V          V
Sbjct: 413 LHTIAVT------------TDNDVYTWGWGSSGCLGFGDRKFQLVPQRVPSLSGEEISSV 460

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIE 565
           + G   T+ + ++    +  + DY QL +   TG     ++
Sbjct: 461 SGGEKHTLIVRSSDT--TTFAFDYKQLVNDQKTGDIAFLVQ 499



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 139/326 (42%), Gaps = 35/326 (10%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           + S+G G  G+LG  V  D   P +I  L G  I  +ACGE H+ AVT  GD+Y+WG G 
Sbjct: 3   VISFGVGKQGQLGLDVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGRG- 61

Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
              G LG   + +   P  +   +E  +I  + CG +H+ A+T  GK++ +G        
Sbjct: 62  -KEGELGH-PQKAMTAPPALIKALEHERIVKVACGNYHSLALTDTGKVYQWGQ------- 112

Query: 437 HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
                      E++  K         GV     +VE+ G  S ++ ++   L  + +G +
Sbjct: 113 ---------LHEIDATK--------SGVKSQGGLVEMTGIKSFASKVADHSLSMYLNGEK 155

Query: 497 GQLGHGDAEPRVV---PLCV-KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
                  A   V+   P     V+DD    +     +I    T   Q      +  G++ 
Sbjct: 156 AAYDEESASSSVLQDNPTANGLVTDDQEEEEEFLPEAIVD--TQQEQQPEKSGSKVGEIV 213

Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
                   P  ++   K   I DI+ G  + A V+S   VYTWG    GQLG GD     
Sbjct: 214 DKNQMT--PVLVDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHG 271

Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
            P ++ +L +K + ++ CG    AAI
Sbjct: 272 NPRVIRSLSNKSIVNIACGRQHMAAI 297



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 111/235 (47%), Gaps = 30/235 (12%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+V+ WG     G LG           DR     P+V+ S       +IACG +H   ++
Sbjct: 249 GNVYTWGFN-EKGQLG---------LGDRWYHGNPRVIRSLSNKSIVNIACGRQHMAAIS 298

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPK--LIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
           K G +++WG G  G+LGHG    + +PK  L        I  VA G   T AV+ +G+L+
Sbjct: 299 KSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQKKIVQVATGANFTMAVSENGELF 358

Query: 371 TWGDGIHNLGLLGQVSEISH--W-------------IPRKVSGQMEGLQISSICCGPWHT 415
           ++G G    G LG   +  +  W             +P++V   +E +++  + CG  HT
Sbjct: 359 SFGHG--EYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKA-LESVKVRKVACGHLHT 415

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
            A+T+   ++T+G G+ G LG GDR    VP+ V +L   +    S G  HT  +
Sbjct: 416 IAVTTDNDVYTWGWGSSGCLGFGDRKFQLVPQRVPSLSGEEISSVSGGEKHTLIV 470



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 55/92 (59%)

Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL 341
           +D L P V++       + IACG  H++ VT+ G ++SWG G  G+LGH  +A  + P L
Sbjct: 20  KDQLDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGRGKEGELGHPQKAMTAPPAL 79

Query: 342 IDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
           I AL    I  VACG +H+ A+T +G +Y WG
Sbjct: 80  IKALEHERIVKVACGNYHSLALTDTGKVYQWG 111


>gi|157849730|gb|ABV89648.1| UVB-resistance 8 [Brassica rapa]
          Length = 432

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 167/371 (45%), Gaps = 68/371 (18%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+ G+ H+V +     + SWG G  G+LGHG   D S P  + AL+   I  V CG  HT
Sbjct: 16  ISAGASHSVALLSGEVVCSWGRGEDGQLGHGDAEDRSSPTQLSALDEHQIVSVTCGADHT 75

Query: 361 CAVTLSG-DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
            A + S  ++Y+WG G  + G LG  +    + P  +   + G+ I  I CG  H  A+T
Sbjct: 76  VAYSQSRLEVYSWGWG--DFGRLGHGNSSDLFTPLPIKA-LHGVMIKQIACGDSHCLAVT 132

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G++ ++G    G LG G+   + VP++++  + ++  M + G  HTAA+ E       
Sbjct: 133 MDGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 185

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVV----PLCVKVSD------DISFC------- 522
                   L+ W DG   + G  D   R+       CV+  D       ISF        
Sbjct: 186 -----DGDLYGW-DGKIWKFGISDRNDRLFLKEYLCCVRDVDGAVMQPHISFLLWSIIYL 239

Query: 523 --------------------------------KVACGHSITIALTATGQVFSMGSADYGQ 550
                                           +++ G   T+ LT+ G+++  G   +GQ
Sbjct: 240 WMEQIWPTRTWRLGGSPCFLTNWKRSATAFFSQISGGWRHTMPLTSDGKLYGWGWNKFGQ 299

Query: 551 LGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           +G   +  +  P ++      + ++ ++CG  H   V+ ++ V+ WG+G NGQLG G++ 
Sbjct: 300 VGVGNNLDQCSPVQVRFPDDQKVVQ-VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESL 358

Query: 610 NKQTPTLVEAL 620
           ++ +P ++EAL
Sbjct: 359 DRNSPNIIEAL 369



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/184 (33%), Positives = 93/184 (50%), Gaps = 13/184 (7%)

Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
           K ++ S G  H+ A+            LS + + +WG G +GQLGHGDAE R  P  +  
Sbjct: 12  KVLIISAGASHSVAL------------LSGEVVCSWGRGEDGQLGHGDAEDRSSPTQLSA 59

Query: 516 SDDISFCKVACGHSITIALTATG-QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIE 574
            D+     V CG   T+A + +  +V+S G  D+G+LG   S+  F       +    I+
Sbjct: 60  LDEHQIVSVTCGADHTVAYSQSRLEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGVMIK 119

Query: 575 DIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNF 634
            IACG  H   V+   EV +WG+  NGQLG G+ E+   P  ++A    ++K V  G+  
Sbjct: 120 QIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFEGIRIKMVAAGAEH 179

Query: 635 TAAI 638
           TAA+
Sbjct: 180 TAAV 183



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/132 (37%), Positives = 63/132 (47%), Gaps = 18/132 (13%)

Query: 254 DVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAV 309
           +V+ WG G    LG+G           +S+D    L  K L   ++   + IACG  H +
Sbjct: 84  EVYSWGWGDFGRLGHG-----------NSSDLFTPLPIKALHGVMI---KQIACGDSHCL 129

Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
            VT  G++ SWG    G+LG G   D   P+ I A  G  I MVA G  HT AVT  GDL
Sbjct: 130 AVTMDGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDL 189

Query: 370 YTWGDGIHNLGL 381
           Y W   I   G+
Sbjct: 190 YGWDGKIWKFGI 201



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 16/157 (10%)

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PT 562
           AE  V P   KV        ++ G S ++AL +   V S G  + GQLG   +  +  PT
Sbjct: 2   AEGEVTPPPRKV------LIISAGASHSVALLSGEVVCSWGRGEDGQLGHGDAEDRSSPT 55

Query: 563 RIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALR 621
           ++    +H+ +  + CG+ H +A   S+ EVY+WG G  G+LGHG++ +  TP  ++AL 
Sbjct: 56  QLSALDEHQIVS-VTCGADHTVAYSQSRLEVYSWGWGDFGRLGHGNSSDLFTPLPIKALH 114

Query: 622 DKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQ 658
              +K + CG +   A+ +       D  + S  RNQ
Sbjct: 115 GVMIKQIACGDSHCLAVTM-------DGEVQSWGRNQ 144



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 18/194 (9%)

Query: 350 IHMVACGEFHTCAVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSI 408
           + +++ G  H+ A+ LSG++  +WG G    G LG         P ++S  ++  QI S+
Sbjct: 13  VLIISAGASHSVAL-LSGEVVCSWGRG--EDGQLGHGDAEDRSSPTQLSA-LDEHQIVSV 68

Query: 409 CCGPWHTAAIT-SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
            CG  HT A + S  +++++G G FG LGHG+ S    P  ++ L  +     +CG  H 
Sbjct: 69  TCGADHTVAYSQSRLEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGVMIKQIACGDSHC 128

Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
            A+                ++ +WG    GQLG G+ E  +VP  ++  + I    VA G
Sbjct: 129 LAVT------------MDGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFEGIRIKMVAAG 176

Query: 528 HSITIALTATGQVF 541
              T A+T  G ++
Sbjct: 177 AEHTAAVTEDGDLY 190



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 35/248 (14%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           ++   +  D+L+P+ +++   +  + +A G++H   VT+ G ++ W +G   K G     
Sbjct: 147 QLGLGNTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGW-DGKIWKFGISDRN 205

Query: 335 DVSYPK----LIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI---HNLGLLGQVSE 387
           D  + K     +  ++G+ +           +  L   +Y W + I       L G    
Sbjct: 206 DRLFLKEYLCCVRDVDGAVMQ-------PHISFLLWSIIYLWMEQIWPTRTWRLGGSPCF 258

Query: 388 ISHWIPRKVSGQMEGLQISSICCGPW-HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVP 446
           +++W   K S      QIS    G W HT  +TS GKL+ +G   FG +G G+      P
Sbjct: 259 LTNW---KRSATAFFSQIS----GGWRHTMPLTSDGKLYGWGWNKFGQVGVGNNLDQCSP 311

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP 506
            +V    + K V  SCG  HT A+ E               +F WG G  GQLG G++  
Sbjct: 312 VQVRFPDDQKVVQVSCGWRHTLAVTE------------RNNVFAWGRGTNGQLGIGESLD 359

Query: 507 RVVPLCVK 514
           R  P  ++
Sbjct: 360 RNSPNIIE 367



 Score = 46.2 bits (108), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 32/46 (69%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
           ++CG +H + VT++  +F+WG G+ G+LG G   D + P +I+AL+
Sbjct: 325 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNSPNIIEALS 370


>gi|395748770|ref|XP_002827256.2| PREDICTED: serine/threonine-protein kinase Nek8 [Pongo abelii]
          Length = 688

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 149/348 (42%), Gaps = 59/348 (16%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW---- 372
           +++WG G G             P  +  LN + +  VA G      VT SG L  W    
Sbjct: 310 VYAWGGGLG------------TPLRLPMLN-TEVVQVAIGRTQKAGVTRSGRLILWEAPP 356

Query: 373 -GDGIHNLGLLGQVSEIS-HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            G G  +L L G V +    +I R + GQ  G+ I  + CG + TA +T  G + TFG G
Sbjct: 357 LGAGGGSL-LPGAVEQPQPQFISRFLEGQ-SGVTIKHVACGDFFTACLTDRGIIMTFGSG 414

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
           + G LGHG  +  S P  VE L   + V  +CG  H  A+             + ++LF 
Sbjct: 415 SNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALS------------TERELFA 462

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG G  G+LG G  E    P  V +       +V CG   ++ LT  GQ  + GS  + +
Sbjct: 463 WGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNK 522

Query: 551 LGSPG-STGKFPTRIEGNIKHRYIED-------------------IACGSYHIAVVSSKS 590
           LG    S G+ P      + H+ +E+                   I  G+ H A V++  
Sbjct: 523 LGLDHLSLGEEP------VPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASG 576

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + YT+G   +GQLG       + P  V+ L   ++  V CG  FT AI
Sbjct: 577 DCYTFGSNQHGQLGTNARRGSRVPCKVQGLEGIKMAMVACGDAFTVAI 624



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 149/335 (44%), Gaps = 21/335 (6%)

Query: 253 GDVFIW-----GEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
           G + +W     G G G  LL GAV          +   + + LE    +  + +ACG   
Sbjct: 347 GRLILWEAPPLGAG-GGSLLPGAVE-------QPQPQFISRFLEGQSGVTIKHVACGDFF 398

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
              +T +G I ++G GS G LGHG   D+S P +++AL G  +  VACG  H  A++   
Sbjct: 399 TACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTER 458

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           +L+ WG G  + G LG  +  SH  P++V     G +   + CG   +  +T  G+    
Sbjct: 459 ELFAWGRG--DSGRLGLGTRESHSCPQQVP-MPPGQEAQRVVCGIDSSMILTVPGQALAC 515

Query: 428 GDGTFGALG--HGDRSSTSVP-REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           G   F  LG  H       VP ++VE      T++ S  +     +    G    +   +
Sbjct: 516 GSNRFNKLGLDHLSLGEEPVPHQQVEEALSF-TLLGSAPLDQEPLLSIDLGTAHSAAVTA 574

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
           S   +T+G    GQLG        VP  V+  + I    VACG + T+A+ A G+V+S G
Sbjct: 575 SGDCYTFGSNQHGQLGTNARRGSRVPCKVQGLEGIKMAMVACGDAFTVAIGAEGEVYSWG 634

Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIAC 578
               G+LG        P  ++ +  H Y +  ++C
Sbjct: 635 KGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSC 669



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 175/397 (44%), Gaps = 52/397 (13%)

Query: 252 LGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           L  V+ WG GLG  L                   LP +L + VV     +A G      V
Sbjct: 307 LSSVYAWGGGLGTPLR------------------LP-MLNTEVV----QVAIGRTQKAGV 343

Query: 312 TKQGQIFSW-----GEGSGGKLGHGVEADVS--YPKLIDALNGSNIHMVACGEFHTCAVT 364
           T+ G++  W     G G G  L   VE        + ++  +G  I  VACG+F T  +T
Sbjct: 344 TRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVTIKHVACGDFFTACLT 403

Query: 365 LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
             G + T+G G +     G +++IS   P  V   + G ++  + CG  H  A+++  +L
Sbjct: 404 DRGIIMTFGSGSNGCLGHGSLTDISQ--PTIVEALL-GYEMVQVACGASHVLALSTEREL 460

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT--SGSNG 482
           F +G G  G LG G R S S P++V      +     CG+  ++ I+ V G+    GSN 
Sbjct: 461 FAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGI-DSSMILTVPGQALACGSNR 519

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRV-------VPLCVKVSDDISFCKVACGHSITIALT 535
            +   L     G E  + H   E  +        PL     D      +  G + + A+T
Sbjct: 520 FNKLGLDHLSLGEE-PVPHQQVEEALSFTLLGSAPL-----DQEPLLSIDLGTAHSAAVT 573

Query: 536 ATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
           A+G  ++ GS  +GQLG+    G + P +++G ++   +  +ACG      + ++ EVY+
Sbjct: 574 ASGDCYTFGSNQHGQLGTNARRGSRVPCKVQG-LEGIKMAMVACGDAFTVAIGAEGEVYS 632

Query: 595 WGKGANGQLGHGDNE-NKQTPTLVEALRDKQVKSVVC 630
           WGKGA G+LG  D +     P  ++      V SV C
Sbjct: 633 WGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSC 669


>gi|443715597|gb|ELU07510.1| hypothetical protein CAPTEDRAFT_122289, partial [Capitella teleta]
          Length = 477

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 164/346 (47%), Gaps = 31/346 (8%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           I+CG +H  L+   G++F++G+ + G+LG G    V+ P  I +L    +H VACG  HT
Sbjct: 30  ISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTKPTRIKSLKAEKVHQVACGRSHT 89

Query: 361 CAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
              T SG +Y++G +    LGL     ++    P  + G +E   +  +  G +H+  +T
Sbjct: 90  LLATESGKIYSFGCNNDRQLGLGLDDEKVCS--PTVIKG-LESHAVKMLSAGMYHSCVLT 146

Query: 420 SAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
             G ++ +G G  G LG G D +    P  ++   E+  V  +CG +HTA +        
Sbjct: 147 DKGSVYLWGGGEEGQLGFGEDVTKHETPERLDVDDEV--VCIACGYYHTALVT------- 197

Query: 479 GSNGLSSKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDIS--FCKVACGHSITIALT 535
                +  KL T+G+  EG+LG G D     +P   KV D I      VACG + T+A+T
Sbjct: 198 -----AGGKLLTFGETDEGKLGRGSDTGDNCLP---KVVDGIEGHVVSVACGGAHTVAIT 249

Query: 536 ATGQVFSMGSADYGQLGSPGST--GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
               V++ G+   GQLG          P +I    K   +   +CG  H A+V+ + +++
Sbjct: 250 GW-LVYTFGNGSSGQLGHGNMLLQADTPHKIVWQ-KPTKVRSASCGENHTALVTDRGQLW 307

Query: 594 TWGKGANGQLGHGDNE--NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
           T G G +G+L  G+    N+  P          V+ V CG   T A
Sbjct: 308 TCGDGRHGKLALGEENFANQFKPCHSVRFSKFVVEQVSCGGCHTLA 353



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 146/310 (47%), Gaps = 25/310 (8%)

Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD-VSYPKLIDAL 345
           P  ++S        +ACG  H +L T+ G+I+S+G  +  +LG G++ + V  P +I  L
Sbjct: 68  PTRIKSLKAEKVHQVACGRSHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGL 127

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEIS-HWIPRKVSGQMEGLQ 404
               + M++ G +H+C +T  G +Y WG G    G LG   +++ H  P ++    E   
Sbjct: 128 ESHAVKMLSAGMYHSCVLTDKGSVYLWGGG--EEGQLGFGEDVTKHETPERLDVDDE--- 182

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCG 463
           +  I CG +HTA +T+ GKL TFG+   G LG G D     +P+ V+ + E   V  +CG
Sbjct: 183 VVCIACGYYHTALVTAGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDGI-EGHVVSVACG 241

Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFC 522
             HT AI             +   ++T+G+G+ GQLGHG+   +   P  +         
Sbjct: 242 GAHTVAI-------------TGWLVYTFGNGSSGQLGHGNMLLQADTPHKIVWQKPTKVR 288

Query: 523 KVACGHSITIALTATGQVFSMGSADYGQ--LGSPGSTGKFPTRIEGNIKHRYIEDIACGS 580
             +CG + T  +T  GQ+++ G   +G+  LG      +F            +E ++CG 
Sbjct: 289 SASCGENHTALVTDRGQLWTCGDGRHGKLALGEENFANQFKPCHSVRFSKFVVEQVSCGG 348

Query: 581 YHIAVVSSKS 590
            H       S
Sbjct: 349 CHTLATGKPS 358



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 140/291 (48%), Gaps = 25/291 (8%)

Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
           ++CG+ HT  +   G ++T+GD       LG    ++   P ++   ++  ++  + CG 
Sbjct: 30  ISCGDEHTSLLAGDGRVFTFGDNAWGQLGLGHTKPVTK--PTRIK-SLKAEKVHQVACGR 86

Query: 413 WHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIV 471
            HT   T +GK+++FG      LG G D      P  ++ L+     M S G++H+  + 
Sbjct: 87  SHTLLATESGKIYSFGCNNDRQLGLGLDDEKVCSPTVIKGLESHAVKMLSAGMYHSCVLT 146

Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSI 530
           +               ++ WG G EGQLG G D      P  + V D++  C +ACG+  
Sbjct: 147 D------------KGSVYLWGGGEEGQLGFGEDVTKHETPERLDVDDEV-VC-IACGYYH 192

Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
           T  +TA G++ + G  D G+LG    TG    P  ++G   H  +  +ACG  H   ++ 
Sbjct: 193 TALVTAGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDGIEGH--VVSVACGGAHTVAITG 250

Query: 589 KSEVYTWGKGANGQLGHGDNE-NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
              VYT+G G++GQLGHG+      TP  +   +  +V+S  CG N TA +
Sbjct: 251 WL-VYTFGNGSSGQLGHGNMLLQADTPHKIVWQKPTKVRSASCGENHTALV 300



 Score = 49.7 bits (117), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 10/99 (10%)

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
           TG VF+ G + +    +  +  KF  R E  + H     I+CG  H ++++    V+T+G
Sbjct: 1   TGAVFTFGKSKF----ADNAPSKFWIR-EDKVLH-----ISCGDEHTSLLAGDGRVFTFG 50

Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
             A GQLG G  +    PT +++L+ ++V  V CG + T
Sbjct: 51  DNAWGQLGLGHTKPVTKPTRIKSLKAEKVHQVACGRSHT 89


>gi|397483074|ref|XP_003812730.1| PREDICTED: serine/threonine-protein kinase Nek8 [Pan paniscus]
          Length = 692

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 149/348 (42%), Gaps = 59/348 (16%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW---- 372
           +++WG G G             P  +  LN + +  VA G      VT SG L  W    
Sbjct: 314 VYAWGGGLG------------TPLRLPMLN-TEVVQVAAGRTQKAGVTRSGRLILWEAPP 360

Query: 373 -GDGIHNLGLLGQVSEIS-HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            G G  +L L G V +    +I R + GQ  G+ I  + CG + TA +T  G + TFG G
Sbjct: 361 LGAGGGSL-LPGAVEQPQPQFISRFLEGQ-SGVTIKHVACGDFFTACLTDRGIIMTFGSG 418

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
           + G LGHG  +  S P  VE L   + V  +CG  H  A+             + ++LF 
Sbjct: 419 SNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALS------------TERELFA 466

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG G  G+LG G  E    P  V +       +V CG   ++ LT  GQ  + GS  + +
Sbjct: 467 WGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNK 526

Query: 551 LGSPG-STGKFPTRIEGNIKHRYIED-------------------IACGSYHIAVVSSKS 590
           LG    S G+ P      + H+ +E+                   I  G+ H A V++  
Sbjct: 527 LGLDHLSLGEEP------VPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASG 580

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + YT+G   +GQLG       + P  V+ L   ++  V CG  FT AI
Sbjct: 581 DCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAI 628



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 155/350 (44%), Gaps = 23/350 (6%)

Query: 253 GDVFIW-----GEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
           G + +W     G G G  LL GAV          +   + + LE    +  + +ACG   
Sbjct: 351 GRLILWEAPPLGAG-GGSLLPGAVE-------QPQPQFISRFLEGQSGVTIKHVACGDFF 402

Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
              +T +G I ++G GS G LGHG   D+S P +++AL G  +  VACG  H  A++   
Sbjct: 403 TACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTER 462

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           +L+ WG G  + G LG  +  SH  P++V     G +   + CG   +  +T  G+    
Sbjct: 463 ELFAWGRG--DSGRLGLGTRESHSCPQQVP-MPPGQEAQRVVCGIDSSMILTVPGQALAC 519

Query: 428 GDGTFGALG--HGDRSSTSVP-REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
           G   F  LG  H       VP ++VE      T++ S  +     +    G    +   +
Sbjct: 520 GSNRFNKLGLDHLSLGEEPVPHQQVEEALSF-TLLGSAPLDQEPLLSIDLGTAHSAAVTA 578

Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
           S   +T+G    GQLG         P  V+  + I    VACG + T+A+ A G+V+S G
Sbjct: 579 SGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAEGEVYSWG 638

Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIAC--GSYHIAVVSSKSE 591
               G+LG        P  ++ +  H Y +  ++C  G+  +AV S   E
Sbjct: 639 KGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSCCHGNTLLAVRSVTDE 688



 Score =  113 bits (283), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 175/397 (44%), Gaps = 52/397 (13%)

Query: 252 LGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           L  V+ WG GLG  L                   LP +L + VV     +A G      V
Sbjct: 311 LSSVYAWGGGLGTPLR------------------LP-MLNTEVV----QVAAGRTQKAGV 347

Query: 312 TKQGQIFSW-----GEGSGGKLGHGVEADVS--YPKLIDALNGSNIHMVACGEFHTCAVT 364
           T+ G++  W     G G G  L   VE        + ++  +G  I  VACG+F T  +T
Sbjct: 348 TRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVTIKHVACGDFFTACLT 407

Query: 365 LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
             G + T+G G +     G +++IS   P  V   + G ++  + CG  H  A+++  +L
Sbjct: 408 DRGIIMTFGSGSNGCLGHGSLTDISQ--PTIVEALL-GYEMVQVACGASHVLALSTEREL 464

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT--SGSNG 482
           F +G G  G LG G R S S P++V      +     CG+  ++ I+ V G+    GSN 
Sbjct: 465 FAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGI-DSSMILTVPGQALACGSNR 523

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRV-------VPLCVKVSDDISFCKVACGHSITIALT 535
            +   L     G E  + H   E  +        PL     D      +  G + + A+T
Sbjct: 524 FNKLGLDHLSLGEE-PVPHQQVEEALSFTLLGSAPL-----DQEPLLSIDLGTAHSAAVT 577

Query: 536 ATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
           A+G  ++ GS  +GQLG+    G + P +++G ++   +  +ACG      + ++ EVY+
Sbjct: 578 ASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQG-LEGIKMAMVACGDAFTVAIGAEGEVYS 636

Query: 595 WGKGANGQLGHGDNE-NKQTPTLVEALRDKQVKSVVC 630
           WGKGA G+LG  D +     P  ++      V SV C
Sbjct: 637 WGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSC 673


>gi|380012154|ref|XP_003690152.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like,
           partial [Apis florea]
          Length = 647

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 171/350 (48%), Gaps = 30/350 (8%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           SI+CG +H+ ++ + G++F +G    G+LG G +  +S P  +  L    +  VACG  H
Sbjct: 29  SISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHISKPSCVKVLKPEKVTHVACGRAH 88

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQ-VSEI--SHWIPRKV--SGQMEGLQISSICCGPWH 414
           T   T++  ++  G      G LG+ +S I  S  IP  V  SG   G +I  I  G  H
Sbjct: 89  TLICTVAEKIFACGSD--QEGQLGRGISAIGDSASIPVLVYDSGPT-GSKIVQIVAGSHH 145

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSS-TSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           + A+TS G +F +G    G LG  D S   + P +V   + +K +  + G +H+  + E 
Sbjct: 146 SLALTSDGNVFAWGSNLEGQLGLPDISGLVNKPTKVHIPEPVKQI--NTGYYHSIFLTE- 202

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITI 532
                  NGL    ++  G+   G+LG   +   ++VP  +++   +    VACG   T+
Sbjct: 203 -------NGL----VYVCGESESGKLGIDINFSTQIVPKQMQLPSPV--IHVACGGHHTV 249

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKF--PTRI-EGNIKHRYIEDIACGSYHIAVVSSK 589
            LT    ++  GS   GQLG   +  +   P  +  G +K+  I  I+CG  H A+++  
Sbjct: 250 ILTEKDNLYCTGSNSSGQLGLGTNVTELHIPKLLPRGALKNEKISHISCGESHTAILTES 309

Query: 590 SEVYTWGKGANGQLGHGDNENK-QTPTLVEALRDKQVKSVVCGSNFTAAI 638
            ++YT G G +G+LG  +NEN     T V+  ++  + ++ CG   T  I
Sbjct: 310 GKLYTCGDGRHGKLGLEENENNVHELTFVQRYKELFISNISCGGCHTILI 359



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 123/292 (42%), Gaps = 70/292 (23%)

Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
           + SI CG  H+A I  +G+LF FG   +G LG G ++  S P  V+ LK  K    +CG 
Sbjct: 27  VISISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHISKPSCVKVLKPEKVTHVACGR 86

Query: 465 WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA---EPRVVPLCVKVSDDI-- 519
            HT  I  VA           +K+F  G   EGQLG G +   +   +P+ V  S     
Sbjct: 87  AHT-LICTVA-----------EKIFACGSDQEGQLGRGISAIGDSASIPVLVYDSGPTGS 134

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTRIE-----GNIKHRY 572
              ++  G   ++ALT+ G VF+ GS   GQLG P  +G    PT++        I   Y
Sbjct: 135 KIVQIVAGSHHSLALTSDGNVFAWGSNLEGQLGLPDISGLVNKPTKVHIPEPVKQINTGY 194

Query: 573 IEDI-------------------------------------------ACGSYHIAVVSSK 589
              I                                           ACG +H  +++ K
Sbjct: 195 YHSIFLTENGLVYVCGESESGKLGIDINFSTQIVPKQMQLPSPVIHVACGGHHTVILTEK 254

Query: 590 SEVYTWGKGANGQLGHGDNENK-QTPTLVE--ALRDKQVKSVVCGSNFTAAI 638
             +Y  G  ++GQLG G N  +   P L+   AL+++++  + CG + TA +
Sbjct: 255 DNLYCTGSNSSGQLGLGTNVTELHIPKLLPRGALKNEKISHISCGESHTAIL 306



 Score = 89.4 bits (220), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 159/359 (44%), Gaps = 68/359 (18%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+VF WG  L  G LG      +IS       L+ K  +  +    + I  G  H++ +T
Sbjct: 153 GNVFAWGSNL-EGQLGLP----DIS------GLVNKPTKVHIPEPVKQINTGYYHSIFLT 201

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSY-----PKLIDALNGSNIHMVACGEFHTCAVTLSG 367
           + G ++  GE   GKLG     D+++     PK +  L    IH VACG  HT  +T   
Sbjct: 202 ENGLVYVCGESESGKLG----IDINFSTQIVPKQM-QLPSPVIH-VACGGHHTVILTEKD 255

Query: 368 DLYTWG-DGIHNLGLLGQVSE--ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
           +LY  G +    LGL   V+E  I   +PR   G ++  +IS I CG  HTA +T +GKL
Sbjct: 256 NLYCTGSNSSGQLGLGTNVTELHIPKLLPR---GALKNEKISHISCGESHTAILTESGKL 312

Query: 425 FTFGDGTFGALG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL 483
           +T GDG  G LG   + ++      V+  KEL     SCG  HT  I    G+   +N +
Sbjct: 313 YTCGDGRHGKLGLEENENNVHELTFVQRYKELFISNISCGGCHTILI----GQKRETNRI 368

Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV-----------SDDISFCKVACGHSITI 532
             +      D ++  +   +A P   PL V +           +++I   ++    S+T 
Sbjct: 369 QKEM-----DNSQEHIQKRNALP---PLKVPINRLQNETRDEHTNEIINDRLNLRKSVTE 420

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
           ++T++ +   +                 P RIE NIK+   E+    +    V S+KS+
Sbjct: 421 SVTSSRETMEIA----------------PQRIEENIKYNENENDVTNNITNDVYSTKSK 463



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 15/105 (14%)

Query: 537 TGQVFSMGSADYGQLGSPGSTGKFPTRIEGN--IKHRYIEDIACGSYHIAVVSSKSEVYT 594
           TG VF++G +            +F   +  +  I+   +  I+CG  H AV+     ++ 
Sbjct: 1   TGAVFTIGRS------------RFADNVASHFFIRRDPVISISCGDEHSAVICQSGRLFV 48

Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
           +G    GQLG G   +   P+ V+ L+ ++V  V CG   T  IC
Sbjct: 49  FGSNDWGQLGLGHKNHISKPSCVKVLKPEKVTHVACGRAHT-LIC 92


>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
 gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
          Length = 527

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 23/314 (7%)

Query: 291 ESTVVLDAQSIACGS--KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
           E  + L  Q+   GS     +  T   +IF  G    G LG G       P+ +D+LNG 
Sbjct: 15  EEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGK 74

Query: 349 NIHMVACGEF-HTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQIS 406
            I  ++ G   H    T  G+++TWG   HN    LG  +     +P  +S  +   Q+ 
Sbjct: 75  KIACLSYGSGPHIVLATTEGEVFTWG---HNAYSQLGNGTTNHGLVPCHISTNLSNKQVI 131

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVW 465
            + CG +H+  +TS G++F +G    G +G G   +  +PR V    + K V+  +CG  
Sbjct: 132 EVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQM 191

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
              A+V+            + +++ WG    GQLG G++  +  P  V     I   +VA
Sbjct: 192 CCMAVVD------------TGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVA 239

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIA 584
           CG++ T+ LT  GQV++ G+  YGQLG+   + + +PT +    K R IE  AC S H +
Sbjct: 240 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE-KDRIIEIAACHSTHTS 298

Query: 585 VVSSK-SEVYTWGK 597
              ++   VY WG+
Sbjct: 299 AAKTQGGHVYMWGQ 312



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 109/220 (49%), Gaps = 17/220 (7%)

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           ++F  G    G LG GD  ST  PR +++L   K    S G      +    G+      
Sbjct: 42  EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGE------ 95

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS---FCKVACGHSITIALTATGQ 539
                +FTWG  A  QLG+G     +VP    +S ++S     +VACG   ++ LT+ G+
Sbjct: 96  -----VFTWGHNAYSQLGNGTTNHGLVP--CHISTNLSNKQVIEVACGSYHSLVLTSDGE 148

Query: 540 VFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           VF+ G  + GQ+GS  +  +  P R+ G ++++ +  IACG      V    EVY WG  
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 208

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            NGQLG G++ N+ TP  V AL+  +V+ V CG   T  +
Sbjct: 209 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 248



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 131/272 (48%), Gaps = 25/272 (9%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGS----KHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           D +  + P+ L+S   L+ + IAC S     H VL T +G++F+WG  +  +LG+G    
Sbjct: 58  DVQSTIEPRRLDS---LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNH 114

Query: 336 VSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
              P  I   L+   +  VACG +H+  +T  G+++ WG   +N G +G  S ++  IPR
Sbjct: 115 GLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG--YNNSGQVGSGSTVNQPIPR 172

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           +V+G ++   + +I CG     A+   G+++ +G    G LG G+  +   P  V  L+ 
Sbjct: 173 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 232

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
           ++    +CG  HT  + +              +++ WG  + GQLG G+   +  P  V 
Sbjct: 233 IRVQRVACGYAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSYPTPVT 280

Query: 515 VSDDISFCKVACGHS--ITIALTATGQVFSMG 544
           V  D    ++A  HS   + A T  G V+  G
Sbjct: 281 VEKD-RIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 25/234 (10%)

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAA 469
           GP H    T+ G++FT+G   +  LG+G  +   VP  + T L   + +  +CG +H+  
Sbjct: 84  GP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLV 142

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVA 525
           +             S  ++F WG    GQ+G G       PR V  C++    ++   +A
Sbjct: 143 LT------------SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT---IA 187

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHI 583
           CG    +A+  TG+V+  G    GQLG  G++G  PT  R+   ++   ++ +ACG  H 
Sbjct: 188 CGQMCCMAVVDTGEVYVWGYNGNGQLGL-GNSGNQPTPCRVAA-LQGIRVQRVACGYAHT 245

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            V++ + +VY WG  + GQLG G+  N+  PT V   +D+ ++   C S  T+A
Sbjct: 246 LVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 299



 Score = 66.6 bits (161), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 21/181 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK----VLESTVVLDAQSIACGSKHA 308
           G+VF WG            N  ++ S    +  +P+     L++ VV+   +IACG    
Sbjct: 147 GEVFAWGYN----------NSGQVGSGSTVNQPIPRRVTGCLQNKVVV---TIACGQMCC 193

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           + V   G+++ WG    G+LG G   +   P  + AL G  +  VACG  HT  +T  G 
Sbjct: 194 MAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 253

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT-AAITSAGKLFTF 427
           +Y W  G ++ G LG  ++ +   P  V+ + + + I    C   HT AA T  G ++ +
Sbjct: 254 VYAW--GANSYGQLGTGNKSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMW 310

Query: 428 G 428
           G
Sbjct: 311 G 311


>gi|196010051|ref|XP_002114890.1| hypothetical protein TRIADDRAFT_28793 [Trichoplax adhaerens]
 gi|190582273|gb|EDV22346.1| hypothetical protein TRIADDRAFT_28793 [Trichoplax adhaerens]
          Length = 697

 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 145/332 (43%), Gaps = 33/332 (9%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
           +F+WG  S   L   +         +D      + +  CG+     V+         DG 
Sbjct: 320 VFTWGSSSSKPLMLNLPQRSLQITRVDVSRTQKMGVTNCGQIVIWEVSRCTKKIVQLDGK 379

Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
           ++         I+  IPR + GQ   + I+ + CG   TA +T  G L TFG G  G LG
Sbjct: 380 ND-------RNINIDIPRLLEGQ-SVVNITHVSCGDLFTACLTDRGILMTFGSGANGCLG 431

Query: 437 HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
           HG+ +  + P+ VE+L   + V  SCG  H  AI             +  +LF WG G  
Sbjct: 432 HGNFNEAAHPKIVESLIGYEIVNVSCGASHIMAIT------------AEHELFAWGRGDN 479

Query: 497 GQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS----------A 546
           G+LG  + +   VP  +K+ +      V CG   ++ L   G +   GS          +
Sbjct: 480 GRLGTSNTKTYSVPELIKLPETYQPSSVCCGIDCSMVLCCDGCLLVCGSNRANKLSLDTS 539

Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
           D G +    S  + P+    ++    IE +A G+ H AV++   ++YT G    GQLG+ 
Sbjct: 540 DTGLVDEKHSLTRVPSMPLSSLS---IEQVAAGTSHTAVITEDGKLYTCGVNTYGQLGYE 596

Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            ++ + +   V +L  KQ+K + CG  FT A+
Sbjct: 597 QSKQRVSAKQVSSLNHKQIKYIACGDAFTIAV 628



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 149/300 (49%), Gaps = 15/300 (5%)

Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
           +P++LE   V++   ++CG      +T +G + ++G G+ G LGHG   + ++PK++++L
Sbjct: 388 IPRLLEGQSVVNITHVSCGDLFTACLTDRGILMTFGSGANGCLGHGNFNEAAHPKIVESL 447

Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
            G  I  V+CG  H  A+T   +L+ WG G  + G LG  +  ++ +P  +    E  Q 
Sbjct: 448 IGYEIVNVSCGASHIMAITAEHELFAWGRG--DNGRLGTSNTKTYSVPELIKLP-ETYQP 504

Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
           SS+CCG   +  +   G L   G      L   D S T +  E  +L  + ++  S    
Sbjct: 505 SSVCCGIDCSMVLCCDGCLLVCGSNRANKLSL-DTSDTGLVDEKHSLTRVPSMPLS---- 559

Query: 466 HTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKV 524
            + +I +VA  TS +  ++   KL+T G    GQLG+  ++ RV    V   +      +
Sbjct: 560 -SLSIEQVAAGTSHTAVITEDGKLYTCGVNTYGQLGYEQSKQRVSAKQVSSLNHKQIKYI 618

Query: 525 ACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYH 582
           ACG + TIA+TA  +V++ G    G+LG  G+   F  P RI  N  H   E ++  S H
Sbjct: 619 ACGDAFTIAVTADNEVYAWGKGSRGRLGL-GTEKNFVEPQRITFN--HYNFEILSLASRH 675



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/313 (29%), Positives = 144/313 (46%), Gaps = 20/313 (6%)

Query: 311 VTKQGQIFSWGEGS--------GGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCA 362
           VT  GQI  W             GK    +  D+  P+L++  +  NI  V+CG+  T  
Sbjct: 355 VTNCGQIVIWEVSRCTKKIVQLDGKNDRNINIDI--PRLLEGQSVVNITHVSCGDLFTAC 412

Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
           +T  G L T+G G +     G  +E +H    K+   + G +I ++ CG  H  AIT+  
Sbjct: 413 LTDRGILMTFGSGANGCLGHGNFNEAAH---PKIVESLIGYEIVNVSCGASHIMAITAEH 469

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIV-EVAGKTSGSN 481
           +LF +G G  G LG  +  + SVP  ++  +  +     CG+  +  +  +      GSN
Sbjct: 470 ELFAWGRGDNGRLGTSNTKTYSVPELIKLPETYQPSSVCCGIDCSMVLCCDGCLLVCGSN 529

Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
             +   L T   G   +  H       +PL       +S  +VA G S T  +T  G+++
Sbjct: 530 RANKLSLDTSDTGLVDE-KHSLTRVPSMPL-----SSLSIEQVAAGTSHTAVITEDGKLY 583

Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
           + G   YGQLG   S  +   +   ++ H+ I+ IACG      V++ +EVY WGKG+ G
Sbjct: 584 TCGVNTYGQLGYEQSKQRVSAKQVSSLNHKQIKYIACGDAFTIAVTADNEVYAWGKGSRG 643

Query: 602 QLGHGDNENKQTP 614
           +LG G  +N   P
Sbjct: 644 RLGLGTEKNFVEP 656



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 131/304 (43%), Gaps = 32/304 (10%)

Query: 216 LDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGL----GDVFIWGEGLGNGLLGGAV 271
           LD  N R+   D  R+    +V + +  SC + F       G +  +G G  NG LG   
Sbjct: 376 LDGKNDRNINIDIPRLLEGQSVVNITHVSCGDLFTACLTDRGILMTFGSG-ANGCLG--- 431

Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG 331
                   +  +A  PK++ES +  +  +++CG+ H + +T + ++F+WG G  G+LG  
Sbjct: 432 ------HGNFNEAAHPKIVESLIGYEIVNVSCGASHIMAITAEHELFAWGRGDNGRLGTS 485

Query: 332 VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHN-LGL----LGQVS 386
                S P+LI          V CG   +  +   G L   G    N L L     G V 
Sbjct: 486 NTKTYSVPELIKLPETYQPSSVCCGIDCSMVLCCDGCLLVCGSNRANKLSLDTSDTGLVD 545

Query: 387 EISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVP 446
           E  H + R  S  +  L I  +  G  HTA IT  GKL+T G  T+G LG+         
Sbjct: 546 E-KHSLTRVPSMPLSSLSIEQVAAGTSHTAVITEDGKLYTCGVNTYGQLGYEQSKQRVSA 604

Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP 506
           ++V +L   +    +CG   T A+             +  +++ WG G+ G+LG G  + 
Sbjct: 605 KQVSSLNHKQIKYIACGDAFTIAVT------------ADNEVYAWGKGSRGRLGLGTEKN 652

Query: 507 RVVP 510
            V P
Sbjct: 653 FVEP 656



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 14/148 (9%)

Query: 509 VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPG-STGKFPTRIEGN 567
           +P  ++    ++   V+CG   T  LT  G + + GS   G LG    +    P  +E  
Sbjct: 388 IPRLLEGQSVVNITHVSCGDLFTACLTDRGILMTFGSGANGCLGHGNFNEAAHPKIVESL 447

Query: 568 IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKS 627
           I +  I +++CG+ HI  ++++ E++ WG+G NG+LG  + +    P L++     Q  S
Sbjct: 448 IGYE-IVNVSCGASHIMAITAEHELFAWGRGDNGRLGTSNTKTYSVPELIKLPETYQPSS 506

Query: 628 VVCGSNFTAAICLHKGVSIADHSICSGC 655
           V CG + +  +C            C GC
Sbjct: 507 VCCGIDCSMVLC------------CDGC 522


>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
           [Gorilla gorilla gorilla]
          Length = 527

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 23/314 (7%)

Query: 291 ESTVVLDAQSIACGS--KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
           E  + L  Q+   GS     +  T   +IF  G    G LG G       P+ +D+LNG 
Sbjct: 15  EEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGK 74

Query: 349 NIHMVACGEF-HTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQIS 406
            I  ++ G   H    T  G+++TWG   HN    LG  +     +P  +S  +   Q+ 
Sbjct: 75  KIACLSYGSGPHIVLATTEGEVFTWG---HNAYSQLGNGTTNHGLVPCHISTNLSNKQVI 131

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVW 465
            + CG +H+  +TS G++F +G    G +G G   +  +PR V    + K V+  +CG  
Sbjct: 132 EVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQM 191

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
              A+V+            + +++ WG    GQLG G++  +  P  V     I   +VA
Sbjct: 192 CCMAVVD------------TGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVA 239

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIA 584
           CG++ T+ LT  GQV++ G+  YGQLG+   + + +PT +    K R IE  AC S H +
Sbjct: 240 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE-KDRIIEIAACHSTHTS 298

Query: 585 VVSSK-SEVYTWGK 597
              ++   VY WG+
Sbjct: 299 AAKTQGGHVYMWGQ 312



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 109/220 (49%), Gaps = 17/220 (7%)

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           ++F  G    G LG GD  ST  PR +++L   K    S G      +    G+      
Sbjct: 42  EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGE------ 95

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS---FCKVACGHSITIALTATGQ 539
                +FTWG  A  QLG+G     +VP    +S ++S     +VACG   ++ LT+ G+
Sbjct: 96  -----VFTWGHNAYSQLGNGTTNHGLVP--CHISTNLSNKQVIEVACGSYHSLVLTSDGE 148

Query: 540 VFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           VF+ G  + GQ+GS  +  +  P R+ G ++++ +  IACG      V    EVY WG  
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 208

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            NGQLG G++ N+ TP  V AL+  +V+ V CG   T  +
Sbjct: 209 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 248



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 131/272 (48%), Gaps = 25/272 (9%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGS----KHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           D +  + P+ L+S   L+ + IAC S     H VL T +G++F+WG  +  +LG+G    
Sbjct: 58  DVQSTIEPRRLDS---LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNH 114

Query: 336 VSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
              P  I   L+   +  VACG +H+  +T  G+++ WG   +N G +G  S ++  IPR
Sbjct: 115 GLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG--YNNSGQVGSGSTVNQPIPR 172

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           +V+G ++   + +I CG     A+   G+++ +G    G LG G+  +   P  V  L+ 
Sbjct: 173 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 232

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
           ++    +CG  HT  + +              +++ WG  + GQLG G+   +  P  V 
Sbjct: 233 IRVQRVACGYAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSYPTPVT 280

Query: 515 VSDDISFCKVACGHS--ITIALTATGQVFSMG 544
           V  D    ++A  HS   + A T  G V+  G
Sbjct: 281 VEKD-RIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 25/234 (10%)

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAA 469
           GP H    T+ G++FT+G   +  LG+G  +   VP  + T L   + +  +CG +H+  
Sbjct: 84  GP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLV 142

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVA 525
           +             S  ++F WG    GQ+G G       PR V  C++    ++   +A
Sbjct: 143 LT------------SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT---IA 187

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHI 583
           CG    +A+  TG+V+  G    GQLG  G++G  PT  R+   ++   ++ +ACG  H 
Sbjct: 188 CGQMCCMAVVDTGEVYVWGYNGNGQLGL-GNSGNQPTPCRVAA-LQGIRVQRVACGYAHT 245

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            V++ + +VY WG  + GQLG G+  N+  PT V   +D+ ++   C S  T+A
Sbjct: 246 LVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 299



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 21/181 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK----VLESTVVLDAQSIACGSKHA 308
           G+VF WG            N  ++ S    +  +P+     L++ VV+   +IACG    
Sbjct: 147 GEVFAWGYN----------NSGQVGSGSTVNQPIPRRVTGCLQNKVVV---TIACGQMCC 193

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           + V   G+++ WG    G+LG G   +   P  + AL G  +  VACG  HT  +T  G 
Sbjct: 194 MAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 253

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT-AAITSAGKLFTF 427
           +Y W  G ++ G LG  ++ +   P  V+ + + + I    C   HT AA T  G ++ +
Sbjct: 254 VYAW--GANSYGQLGTGNKSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMW 310

Query: 428 G 428
           G
Sbjct: 311 G 311


>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
           (Silurana) tropicalis]
          Length = 1029

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 100/322 (31%), Positives = 152/322 (47%), Gaps = 26/322 (8%)

Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSN-IHMVACGEFHTCAVTLSGDLYTWG 373
           ++ WG+   G+L    G E +V + K  D       +  V+CGE HT  +   G L + G
Sbjct: 1   MYCWGDNCFGQLALLQG-EKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSCG 59

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFG 433
              +  G LG+ S  S     ++S  +E   I  I CG  H+ A++  G ++++GDG+ G
Sbjct: 60  QNPY--GQLGRKSNNSSI--EQISS-LEAQTIVDISCGTNHSVAVSDEGSIYSWGDGSEG 114

Query: 434 ALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
            LG G+ SS +  P+++  L   K +  SCG +H+ A+ E              ++F+WG
Sbjct: 115 QLGTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALSE------------DGRVFSWG 162

Query: 493 DGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
               GQLG G     +  P  VK    I   +V  G S + AL+ +G VF+ G  + GQL
Sbjct: 163 QNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFAWGKNNAGQL 222

Query: 552 G--SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
           G  S    G F      ++++  +  I+CG  H AV+S    VYT+G   +GQLG     
Sbjct: 223 GFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLGQNSGN 282

Query: 610 NKQTPTLVEALRDKQVKSVVCG 631
               P  +E     QV  V CG
Sbjct: 283 QTSVPQKIEDYAG-QVSQVACG 303



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 173/359 (48%), Gaps = 40/359 (11%)

Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
            Q ++CG KH + + + G + S G+   G+LG   +++ S  + I +L    I  ++CG 
Sbjct: 36  VQKVSCGEKHTLYLLEDGTLLSCGQNPYGQLGR--KSNNSSIEQISSLEAQTIVDISCGT 93

Query: 358 FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA 417
            H+ AV+  G +Y+WGDG       G +S   ++ P+K++G +   +I  I CG +H+ A
Sbjct: 94  NHSVAVSDEGSIYSWGDGSEGQLGTGNLSS-RNFTPKKITG-LFNTKIIQISCGNFHSLA 151

Query: 418 ITSAGKLFTFGDGTFGALGHGDR-SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           ++  G++F++G    G LG G +  + + P+ V++LK +              +V+V   
Sbjct: 152 LSEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGI-------------PLVQVTAG 198

Query: 477 TSGSNGLS-SKKLFTWGDGAEGQLGHGDAEPR---VVPLCVKVSDDISFCKVACGHSITI 532
            S S  LS S  +F WG    GQLG   ++P      P  V    ++    ++CG   T 
Sbjct: 199 GSQSFALSMSGTVFAWGKNNAGQLGF-KSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTA 257

Query: 533 ALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKS 590
            L+  G V++ G   +GQLG + G+    P +IE       +  +ACG YH +  V S +
Sbjct: 258 VLSKDGSVYTFGDDTHGQLGQNSGNQTSVPQKIEDYAGQ--VSQVACGRYHTLLYVFSCN 315

Query: 591 EVYTWGKGA-----------NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            + ++GKG+             +L    + +   PT    LRD  VK +  G+N   A+
Sbjct: 316 RIVSFGKGSLRPQDNTECSDEAELPSEFDISSLVPT--NDLRDVYVKWIFAGNNVGFAV 372



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 124/247 (50%), Gaps = 23/247 (9%)

Query: 290 LESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDALNGS 348
           LE+  ++D   I+CG+ H+V V+ +G I+SWG+GS G+LG G  +  ++ PK I  L  +
Sbjct: 81  LEAQTIVD---ISCGTNHSVAVSDEGSIYSWGDGSEGQLGTGNLSSRNFTPKKITGLFNT 137

Query: 349 NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSI 408
            I  ++CG FH+ A++  G +++WG   +  G LG  S+I +    ++   ++G+ +  +
Sbjct: 138 KIIQISCGNFHSLALSEDGRVFSWGQ--NKCGQLGLGSQIINQATPQLVKSLKGIPLVQV 195

Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGH--GDRSSTSVPREVETLKELKTVMASCGVWH 466
             G   + A++ +G +F +G    G LG        T  P  V +L+ L     SCG  H
Sbjct: 196 TAGGSQSFALSMSGTVFAWGKNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEH 255

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI-SFCKVA 525
           TA +        GS       ++T+GD   GQLG        VP   K+ D      +VA
Sbjct: 256 TAVL-----SKDGS-------VYTFGDDTHGQLGQNSGNQTSVP--QKIEDYAGQVSQVA 301

Query: 526 CGHSITI 532
           CG   T+
Sbjct: 302 CGRYHTL 308



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 118/222 (53%), Gaps = 16/222 (7%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G ++ WG+G   G LG       +SS +     +  +  + ++     I+CG+ H++ ++
Sbjct: 103 GSIYSWGDG-SEGQLGTG----NLSSRNFTPKKITGLFNTKII----QISCGNFHSLALS 153

Query: 313 KQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           + G++FSWG+   G+LG G +  + + P+L+ +L G  +  V  G   + A+++SG ++ 
Sbjct: 154 EDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMSGTVFA 213

Query: 372 WGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
           WG   +N G LG  S+     + P  V+  +  L ++ I CG  HTA ++  G ++TFGD
Sbjct: 214 WGK--NNAGQLGFKSDPMKGTFKPHAVNS-LRNLGVAYISCGEEHTAVLSKDGSVYTFGD 270

Query: 430 GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIV 471
            T G LG    + TSVP+++E     +    +CG +HT   V
Sbjct: 271 DTHGQLGQNSGNQTSVPQKIEDYAG-QVSQVACGRYHTLLYV 311



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 25/164 (15%)

Query: 488 LFTWGDGAEGQLGHGDAEPRVVPL----------CVKVSDDISFCKVACGHSITIALTAT 537
           ++ WGD   GQL     E  VV            CV+        KV+CG   T+ L   
Sbjct: 1   MYCWGDNCFGQLALLQGEKEVVHFKENDYFQSQECVQ--------KVSCGEKHTLYLLED 52

Query: 538 GQVFSMGSADYGQLGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
           G + S G   YGQLG   +     + IE   +++ + I DI+CG+ H   VS +  +Y+W
Sbjct: 53  GTLLSCGQNPYGQLGRKSNN----SSIEQISSLEAQTIVDISCGTNHSVAVSDEGSIYSW 108

Query: 596 GKGANGQLGHGDNENKQ-TPTLVEALRDKQVKSVVCGSNFTAAI 638
           G G+ GQLG G+  ++  TP  +  L + ++  + CG+  + A+
Sbjct: 109 GDGSEGQLGTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLAL 152


>gi|224076411|ref|XP_002195043.1| PREDICTED: serine/threonine-protein kinase Nek8 [Taeniopygia
           guttata]
          Length = 698

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 156/368 (42%), Gaps = 55/368 (14%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW-GDG 375
           I++WG G            ++ P  +  LN + +  V+ G      VT SG L  W    
Sbjct: 320 IYTWGSG------------ITTPLRLPMLN-TEVVQVSAGRTQKAGVTKSGRLILWEAPP 366

Query: 376 IHNLG---LLGQVSEIS-HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           +   G   L G   ++   ++ R + GQ  G+ I  + CG   TA +T  G + TFG G+
Sbjct: 367 VGAAGGPSLPGATEQLQPQFVSRFLEGQ-SGVTIKHVSCGDLFTACLTDRGIIMTFGSGS 425

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
            G LGHG+ +  S P+ VE L   + V  +CG  H  A+         SN    +++F W
Sbjct: 426 NGCLGHGNFTDVSQPKIVEALLGYEMVQVACGASHVLAV---------SN---EREVFAW 473

Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
           G G  G+LG G  E    P  V V  +    +V CG   ++ LT   Q+ + GS    +L
Sbjct: 474 GRGDNGRLGLGTLECHNCPQQVTVPPEHEAQRVICGIDSSMVLTVKNQILACGSNRCNKL 533

Query: 552 GSPGSTGKFPTRIEGNIKHRYI-----------EDIAC---GSYHIAVVSSKSEVYTWGK 597
           G    +       E  ++   +           E I C   G+ H A V++    YT+G 
Sbjct: 534 GLDRISSAEEPSPEDQVEEATVFVCAQSAPLNQEPIVCADIGTAHSAAVTASGHCYTFGS 593

Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICS---G 654
             +GQLG     N + P LV  L   +V  V CG  FT AI        AD  +C+   G
Sbjct: 594 NQHGQLGTNSCRNSRVPHLVVGLETMKVTVVACGDAFTVAIG-------ADGEVCTWGKG 646

Query: 655 CRNQFNFR 662
            R +   R
Sbjct: 647 ARGRLGRR 654



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 139/327 (42%), Gaps = 32/327 (9%)

Query: 269 GAVNGVEISSADRR--DALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGG 326
           GA  G  +  A  +     + + LE    +  + ++CG      +T +G I ++G GS G
Sbjct: 368 GAAGGPSLPGATEQLQPQFVSRFLEGQSGVTIKHVSCGDLFTACLTDRGIIMTFGSGSNG 427

Query: 327 KLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVS 386
            LGHG   DVS PK+++AL G  +  VACG  H  AV+   +++ WG G  + G LG  +
Sbjct: 428 CLGHGNFTDVSQPKIVEALLGYEMVQVACGASHVLAVSNEREVFAWGRG--DNGRLGLGT 485

Query: 387 EISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVP 446
              H  P++V+   E  +   + CG   +  +T   ++   G      LG    SS   P
Sbjct: 486 LECHNCPQQVTVPPEH-EAQRVICGIDSSMVLTVKNQILACGSNRCNKLGLDRISSAEEP 544

Query: 447 REVETLKELKT--------------VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
              + ++E                 V A  G  H+AA+             +S   +T+G
Sbjct: 545 SPEDQVEEATVFVCAQSAPLNQEPIVCADIGTAHSAAVT------------ASGHCYTFG 592

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
               GQLG        VP  V   + +    VACG + T+A+ A G+V + G    G+LG
Sbjct: 593 SNQHGQLGTNSCRNSRVPHLVVGLETMKVTVVACGDAFTVAIGADGEVCTWGKGARGRLG 652

Query: 553 SPGSTGKFPTRIEGNIKHRY-IEDIAC 578
                   P  ++    H Y +  +AC
Sbjct: 653 RRDEETGVPKPVQLEETHPYLVTSVAC 679



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 119/517 (23%), Positives = 205/517 (39%), Gaps = 64/517 (12%)

Query: 140 RSHTQKNSPSHVSSISS----DLTNKDSGDTQPILVAYEN---SPQNRLGKAFSEVLSFT 192
           R+    N P+ V  I S     ++++ S D + ++++  N   S + +L +  ++ +   
Sbjct: 201 RAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLNEIMAQAICIR 260

Query: 193 AAAKAYTRAESV-----SKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
                YT   SV      K L  V +        R+S+A    +   SA +         
Sbjct: 261 PLLNLYTDVGSVKMRRPEKPLAPVPTVTHSRTGGRASSARQRGVRRESARTGIP------ 314

Query: 248 DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
               L  ++ WG G+   L                   LP +L + VV     ++ G   
Sbjct: 315 --PPLSSIYTWGSGITTPLR------------------LP-MLNTEVV----QVSAGRTQ 349

Query: 308 AVLVTKQGQIFSW-----GEGSGGKLGHGVEA--DVSYPKLIDALNGSNIHMVACGEFHT 360
              VTK G++  W     G   G  L    E        + ++  +G  I  V+CG+  T
Sbjct: 350 KAGVTKSGRLILWEAPPVGAAGGPSLPGATEQLQPQFVSRFLEGQSGVTIKHVSCGDLFT 409

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
             +T  G + T+G G +     G  +++S     K+   + G ++  + CG  H  A+++
Sbjct: 410 ACLTDRGIIMTFGSGSNGCLGHGNFTDVSQ---PKIVEALLGYEMVQVACGASHVLAVSN 466

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
             ++F +G G  G LG G     + P++V    E +     CG+  ++ ++ V  +    
Sbjct: 467 EREVFAWGRGDNGRLGLGTLECHNCPQQVTVPPEHEAQRVICGI-DSSMVLTVKNQILAC 525

Query: 481 NGLSSKKL-FTWGDGAEGQLGHGDAEPRVVPLCVKVS----DDISFCKVACGHSITIALT 535
                 KL       AE        E   V +C + +    + I    +   HS   A+T
Sbjct: 526 GSNRCNKLGLDRISSAEEPSPEDQVEEATVFVCAQSAPLNQEPIVCADIGTAHSA--AVT 583

Query: 536 ATGQVFSMGSADYGQLGSPGS-TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
           A+G  ++ GS  +GQLG+      + P  + G ++   +  +ACG      + +  EV T
Sbjct: 584 ASGHCYTFGSNQHGQLGTNSCRNSRVPHLVVG-LETMKVTVVACGDAFTVAIGADGEVCT 642

Query: 595 WGKGANGQLGHGDNEN-KQTPTLVEALRDKQVKSVVC 630
           WGKGA G+LG  D E     P  +E      V SV C
Sbjct: 643 WGKGARGRLGRRDEETGVPKPVQLEETHPYLVTSVAC 679


>gi|328783019|ref|XP_395630.4| PREDICTED: hypothetical protein LOC412167, partial [Apis mellifera]
          Length = 854

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 169/350 (48%), Gaps = 30/350 (8%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           SI+CG +H+ ++ + G++F +G    G+LG G +  +S P  +  L    +  VACG  H
Sbjct: 103 SISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHISKPSCVKVLKPEKVTHVACGRAH 162

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQ-VSEISHWIPRKV----SGQMEGLQISSICCGPWH 414
           T   T++  ++  G      G LG+ +S I       V    SG   G +I  I  G  H
Sbjct: 163 TLICTVAEKIFACGSDQE--GQLGRGISAIGDSTSTPVLIYDSGPT-GSKIVQIVAGSHH 219

Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSS-TSVPREVETLKELKTVMASCGVWHTAAIVEV 473
           + A+TS G +F +G    G LG  D S   + P +V   + +K +  + G +H+  + E 
Sbjct: 220 SLALTSDGNVFAWGSNLEGQLGLPDISGLVNKPTKVHIPEPVKRI--NTGYYHSIFLTE- 276

Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITI 532
                  NGL    ++  G+   G+LG   +   +++P  +++ + + +  VACG   T+
Sbjct: 277 -------NGL----VYVCGESESGKLGIDINFSTQIMPKQMQLPNPVIY--VACGGHHTM 323

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKFPT---RIEGNIKHRYIEDIACGSYHIAVVSSK 589
            LT    ++  GS   GQLG   +  +  T     +G +K+  I  I+CG  H A+++  
Sbjct: 324 FLTENNNLYCTGSNSSGQLGLGTNVTELHTPKLLSQGALKNERISRISCGESHTAILTES 383

Query: 590 SEVYTWGKGANGQLGHGDNENK-QTPTLVEALRDKQVKSVVCGSNFTAAI 638
            ++YT G G +G+LG  +NEN     T V+  +   + ++ CG   T  I
Sbjct: 384 GKLYTCGDGRHGKLGLEENENNVHELTFVQRYKQLFISNISCGGCHTILI 433


>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
           containing protein 2 [Oryctolagus cuniculus]
          Length = 551

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 141/291 (48%), Gaps = 21/291 (7%)

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF-HTCAVTLSGDLY 370
           T   +IF  G    G LG G       P+ +D+L+G  I  ++ G   H    T  G+++
Sbjct: 62  TVNDEIFVLGTNCSGCLGLGDAQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVF 121

Query: 371 TWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
           TWG   HN    LG  +     +P ++S  +   Q+  + CG +H+  +TS G++F +G 
Sbjct: 122 TWG---HNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGY 178

Query: 430 GTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
              G +G G  ++  +PR V    + K V+  +CG   + A+V+            + ++
Sbjct: 179 NNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVD------------TGEV 226

Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
           + WG    GQLG G    +  P  V     I   +VACG++ T+ LT  GQV++ G+  Y
Sbjct: 227 YVWGYNGNGQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSY 286

Query: 549 GQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSK-SEVYTWGK 597
           GQLG+   + + +PT +    K R IE  AC S H +   ++   VY WG+
Sbjct: 287 GQLGTGNKSNQSYPTPVVVE-KDRIIEIAACHSTHTSAAKTQGGHVYMWGQ 336



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 109/220 (49%), Gaps = 17/220 (7%)

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           ++F  G    G LG GD  ST  PR +++L   K    S G      +    G+      
Sbjct: 66  EIFVLGTNCSGCLGLGDAQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGE------ 119

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS---FCKVACGHSITIALTATGQ 539
                +FTWG  A  QLG+G     +VP   ++S ++S     +VACG   ++ LT+ G+
Sbjct: 120 -----VFTWGHNAYSQLGNGTTNHGLVP--CQISTNLSNKQVIEVACGSYHSLVLTSDGE 172

Query: 540 VFSMGSADYGQLGS-PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           VF+ G  + GQ+GS P +    P R+ G ++++ + +IACG      V    EVY WG  
Sbjct: 173 VFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYN 232

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            NGQLG G   N+ TP  V AL+  +V+ V CG   T  +
Sbjct: 233 GNGQLGLGSGGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 128/272 (47%), Gaps = 25/272 (9%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGS----KHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           D +  + P+ L+S   L  + IAC S     H VL T +G++F+WG  +  +LG+G    
Sbjct: 82  DAQSTIEPRRLDS---LSGKKIACLSYGSGPHVVLATTEGEVFTWGHNAYSQLGNGTTNH 138

Query: 336 VSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
              P  I   L+   +  VACG +H+  +T  G+++ W  G +N G +G     +  IPR
Sbjct: 139 GLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAW--GYNNSGQVGSGPTANQPIPR 196

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           +V+G ++   + +I CG   + A+   G+++ +G    G LG G   +   P  V  L+ 
Sbjct: 197 RVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRVAALQG 256

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
           ++    +CG  HT  + +              +++ WG  + GQLG G+   +  P  V 
Sbjct: 257 IRVQRVACGYAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSYPTPVV 304

Query: 515 VSDDISFCKVACGHS--ITIALTATGQVFSMG 544
           V  D    ++A  HS   + A T  G V+  G
Sbjct: 305 VEKD-RIIEIAACHSTHTSAAKTQGGHVYMWG 335



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 116/234 (49%), Gaps = 25/234 (10%)

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAA 469
           GP H    T+ G++FT+G   +  LG+G  +   VP ++ T L   + +  +CG +H+  
Sbjct: 108 GP-HVVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLV 166

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVA 525
           +             S  ++F WG    GQ+G G       PR V  C++   +     +A
Sbjct: 167 LT------------SDGEVFAWGYNNSGQVGSGPTANQPIPRRVTGCLQ---NKVVVNIA 211

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHI 583
           CG   ++A+  TG+V+  G    GQLG  GS G  PT  R+   ++   ++ +ACG  H 
Sbjct: 212 CGQMCSMAVVDTGEVYVWGYNGNGQLGL-GSGGNQPTPCRVAA-LQGIRVQRVACGYAHT 269

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            V++ + +VY WG  + GQLG G+  N+  PT V   +D+ ++   C S  T+A
Sbjct: 270 LVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTSA 323



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 126/245 (51%), Gaps = 32/245 (13%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           G+VF WG      LGNG     +   +IS+           L +  V++   +ACGS H+
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHGLVPCQISTN----------LSNKQVIE---VACGSYHS 164

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSG 367
           +++T  G++F+WG  + G++G G  A+   P+ +   L    +  +ACG+  + AV  +G
Sbjct: 165 LVLTSDGEVFAWGYNNSGQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTG 224

Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
           ++Y W  G +  G LG  S  +   P +V+  ++G+++  + CG  HT  +T  G+++ +
Sbjct: 225 EVYVW--GYNGNGQLGLGSGGNQPTPCRVAA-LQGIRVQRVACGYAHTLVLTDEGQVYAW 281

Query: 428 GDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
           G  ++G LG G++S+ S P  V   K+    +A+C   HT+     A KT G +      
Sbjct: 282 GANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSTHTS-----AAKTQGGH------ 330

Query: 488 LFTWG 492
           ++ WG
Sbjct: 331 VYMWG 335


>gi|156396598|ref|XP_001637480.1| predicted protein [Nematostella vectensis]
 gi|156224592|gb|EDO45417.1| predicted protein [Nematostella vectensis]
          Length = 753

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 166/359 (46%), Gaps = 45/359 (12%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           GDV+ WG+     L  G +   E  S   R  +L   +    VL   S+ACG +H + + 
Sbjct: 49  GDVYTWGKSHKGRLGHGDLIEEEGKSMPFRVEILH--MHRIKVL---SVACGIEHTLALC 103

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           + G ++SWG    G+LG G     + P  +  L+      V CG +H+ A++    +Y+W
Sbjct: 104 RDG-VYSWGSSEYGQLGQGDTQQHTRPVYVTELSDKKCIAVVCGHYHSLALSADQQVYSW 162

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           G G+H  G LG  S     +P  V+  + G  ++ +  G  HTA +T+ GK++TFG G +
Sbjct: 163 GWGVH--GQLGLDSIEDALLPSHVTS-LSGAFVTQLAAGYSHTAVLTTEGKVYTFGGGLY 219

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           G LG G  S  ++P+ V+ L++ +  +  CG + T A+             S +KLF WG
Sbjct: 220 GQLGLGTTSKQTLPQLVQALEKDRIYLICCGSFETVAVS------------SEQKLFNWG 267

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
                                +      F  + CG+   +A+T   QVF+ G  D+GQLG
Sbjct: 268 ---------------------RSPHYFRFHMIHCGNWHYLAVTEARQVFTWGFNDHGQLG 306

Query: 553 SPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
              S     FPT ++  +   ++   + G+     + +  +V+ WG+  +GQ  H  +E
Sbjct: 307 HSTSMDHLLFPTVVQ-KLNESFVATASVGAEFSVAMDATGQVWVWGRSDSGQSLHSSSE 364



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/356 (27%), Positives = 169/356 (47%), Gaps = 45/356 (12%)

Query: 291 ESTVVLDAQSI--ACGSKHAVLVTKQGQIFSWGEGSGGKLGHG---VEADVSYPKLIDAL 345
           E TV + +Q +  +CG  H  +V+  G +++WG+   G+LGHG    E   S P  ++ L
Sbjct: 23  EGTVEVQSQRVRLSCGQHHTAVVSASGDVYTWGKSHKGRLGHGDLIEEEGKSMPFRVEIL 82

Query: 346 NGSNIHM--VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
           +   I +  VACG  HT A+   G +Y+WG      G LGQ     H  P  V+ ++   
Sbjct: 83  HMHRIKVLSVACGIEHTLALCRDG-VYSWGSS--EYGQLGQGDTQQHTRPVYVT-ELSDK 138

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
           +  ++ CG +H+ A+++  +++++G G  G LG        +P  V +L        + G
Sbjct: 139 KCIAVVCGHYHSLALSADQQVYSWGWGVHGQLGLDSIEDALLPSHVTSLSGAFVTQLAAG 198

Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK 523
             HTA +      T G       K++T+G G  GQLG G    + +P  V+  +      
Sbjct: 199 YSHTAVLT-----TEG-------KVYTFGGGLYGQLGLGTTSKQTLPQLVQALEKDRIYL 246

Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHI 583
           + CG   T+A+++  ++F+ G +              P     ++ H       CG++H 
Sbjct: 247 ICCGSFETVAVSSEQKLFNWGRS--------------PHYFRFHMIH-------CGNWHY 285

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDN-ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             V+   +V+TWG   +GQLGH  + ++   PT+V+ L +  V +   G+ F+ A+
Sbjct: 286 LAVTEARQVFTWGFNDHGQLGHSTSMDHLLFPTVVQKLNESFVATASVGAEFSVAM 341



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 5/69 (7%)

Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGD---NENKQTPTLVEALRDKQVK--SVVC 630
           ++CG +H AVVS+  +VYTWGK   G+LGHGD    E K  P  VE L   ++K  SV C
Sbjct: 35  LSCGQHHTAVVSASGDVYTWGKSHKGRLGHGDLIEEEGKSMPFRVEILHMHRIKVLSVAC 94

Query: 631 GSNFTAAIC 639
           G   T A+C
Sbjct: 95  GIEHTLALC 103


>gi|440792615|gb|ELR13824.1| BTB/POZ domain containing protein [Acanthamoeba castellanii str.
           Neff]
          Length = 1825

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 102/188 (54%), Gaps = 23/188 (12%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           SIA G  ++  VT  G ++++G G    LGH +      P+ ++AL G  +  VACG FH
Sbjct: 117 SIAVGQMYSAAVTTDGGLWTFGIG---PLGHAISVKQD-PEQVEALRGKKVVAVACGSFH 172

Query: 360 TCAVTLSGDLYTWGDGI-HNLGLLGQVSEISHWI---------------PRKVSGQMEGL 403
              VT SG+LYTWG  + H LG  GQ + I+                  PR+V+  +EG 
Sbjct: 173 MGCVTESGELYTWGSSVWHQLG--GQAAHITIIACYSTAGHGERKNVVEPRRVTA-LEGK 229

Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCG 463
           ++  + CG +HTA  T AG+++TFG G+ GALGHGD     +PR V++L        SCG
Sbjct: 230 RVVEVSCGAYHTAVRTDAGRVYTFGAGSLGALGHGDLVDQEIPRLVDSLVNRCVQHVSCG 289

Query: 464 VWHTAAIV 471
            +HT  +V
Sbjct: 290 WYHTTVVV 297



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 36/228 (15%)

Query: 340 KLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQ 399
           +L+D   G ++  +A G+ ++ AVT  G L+T+G     +G LG    +    P +V   
Sbjct: 106 RLLD-FGGKSVASIAVGQMYSAAVTTDGGLWTFG-----IGPLGHAISVKQ-DPEQVEA- 157

Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGAL----------------GHGDRSST 443
           + G ++ ++ CG +H   +T +G+L+T+G   +  L                GHG+R + 
Sbjct: 158 LRGKKVVAVACGSFHMGCVTESGELYTWGSSVWHQLGGQAAHITIIACYSTAGHGERKNV 217

Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
             PR V  L+  + V  SCG +HTA   +              +++T+G G+ G LGHGD
Sbjct: 218 VEPRRVTALEGKRVVEVSCGAYHTAVRTDAG------------RVYTFGAGSLGALGHGD 265

Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
              + +P  V    +     V+CG   T  +       S+   + G+L
Sbjct: 266 LVDQEIPRLVDSLVNRCVQHVSCGWYHTTVVVGMDPNISLLRDEMGKL 313



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 97/220 (44%), Gaps = 32/220 (14%)

Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
           G  ++SI  G  ++AA+T+ G L+TFG    G LGH   S    P +VE L+  K V  +
Sbjct: 112 GKSVASIAVGQMYSAAVTTDGGLWTFG---IGPLGHA-ISVKQDPEQVEALRGKKVVAVA 167

Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG----------------HGDAE 505
           CG +H   + E            S +L+TWG     QLG                HG+ +
Sbjct: 168 CGSFHMGCVTE------------SGELYTWGSSVWHQLGGQAAHITIIACYSTAGHGERK 215

Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIE 565
             V P  V   +     +V+CG   T   T  G+V++ G+   G LG      +   R+ 
Sbjct: 216 NVVEPRRVTALEGKRVVEVSCGAYHTAVRTDAGRVYTFGAGSLGALGHGDLVDQEIPRLV 275

Query: 566 GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
            ++ +R ++ ++CG YH  VV       +  +   G+L H
Sbjct: 276 DSLVNRCVQHVSCGWYHTTVVVGMDPNISLLRDEMGKLLH 315



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 136/317 (42%), Gaps = 59/317 (18%)

Query: 349 NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSI 408
            +  V+ G + T A + +G+ + W +G      L           R ++ + + +Q+S  
Sbjct: 14  QVKQVSAGLYQTWATSANGECHLWKEGTSMSADL-----------RALATKEKCVQVS-- 60

Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTA 468
            CG  ++A       LF  G G     GH     TS+P  +ET  E   V+     W   
Sbjct: 61  -CGQTYSAL------LFESGVGKVYNSGH----LTSLPPVLETEDESSVVIKQSD-WR-- 106

Query: 469 AIVEVAGKTSGSNGL---------SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
            +++  GK+  S  +         +   L+T+G G    LGH     +  P  V+     
Sbjct: 107 -LLDFGGKSVASIAVGQMYSAAVTTDGGLWTFGIGP---LGHA-ISVKQDPEQVEALRGK 161

Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-----------------PT 562
               VACG      +T +G++++ GS+ + QLG   +                     P 
Sbjct: 162 KVVAVACGSFHMGCVTESGELYTWGSSVWHQLGGQAAHITIIACYSTAGHGERKNVVEPR 221

Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRD 622
           R+      R +E ++CG+YH AV +    VYT+G G+ G LGHGD  +++ P LV++L +
Sbjct: 222 RVTALEGKRVVE-VSCGAYHTAVRTDAGRVYTFGAGSLGALGHGDLVDQEIPRLVDSLVN 280

Query: 623 KQVKSVVCGSNFTAAIC 639
           + V+ V CG   T  + 
Sbjct: 281 RCVQHVSCGWYHTTVVV 297



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 65/120 (54%), Gaps = 12/120 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEIS------SADRRDALLPK---VLESTVVLDAQSIAC 303
           G+++ WG  + + L G A +   I+        +R++ + P+    LE   V++   ++C
Sbjct: 180 GELYTWGSSVWHQLGGQAAHITIIACYSTAGHGERKNVVEPRRVTALEGKRVVE---VSC 236

Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAV 363
           G+ H  + T  G+++++G GS G LGHG   D   P+L+D+L    +  V+CG +HT  V
Sbjct: 237 GAYHTAVRTDAGRVYTFGAGSLGALGHGDLVDQEIPRLVDSLVNRCVQHVSCGWYHTTVV 296


>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
          Length = 551

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 23/314 (7%)

Query: 291 ESTVVLDAQSIACGS--KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
           E  + L  Q+   GS     +  T   +IF  G    G LG G       P+ +D+L G 
Sbjct: 39  EEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGK 98

Query: 349 NIHMVACGEF-HTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQIS 406
            I  ++ G   H    T  G+++TWG   HN    LG  +     +P  +S  +   Q+ 
Sbjct: 99  KIASLSYGSGPHIVLATTDGEVFTWG---HNAYSQLGNGTTNHGLVPCHISTNLSNKQVI 155

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVW 465
            + CG +H+  +TS G++F +G    G +G G  ++  +PR V    + K VM  SCG  
Sbjct: 156 EVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNISCGQM 215

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
            + A+V+            + +++ WG    GQLG G +  +  P  V     I   +VA
Sbjct: 216 CSMAVVD------------TGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVA 263

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIA 584
           CG++ T+ LT  GQ+++ G+  YGQLG+   + + +PT +    K R IE  AC S H +
Sbjct: 264 CGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACHSAHTS 322

Query: 585 VVSSK-SEVYTWGK 597
              ++   VY WG+
Sbjct: 323 AAKTQGGHVYMWGQ 336



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 110/221 (49%), Gaps = 19/221 (8%)

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           ++F  G    G LG GD  ST  PR +++L   K    S G      +    G+      
Sbjct: 66  EIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGE------ 119

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS---FCKVACGHSITIALTATGQ 539
                +FTWG  A  QLG+G     +VP    +S ++S     +VACG   ++ LT+ G+
Sbjct: 120 -----VFTWGHNAYSQLGNGTTNHGLVP--CHISTNLSNKQVIEVACGSYHSLVLTSDGE 172

Query: 540 VFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
           VF+ G  + GQ+GS GST     P R+ G ++++ + +I+CG      V    EVY WG 
Sbjct: 173 VFAWGYNNSGQVGS-GSTANQPIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGY 231

Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
             NGQLG G + N+ TP  V AL+  +V+ V CG   T  +
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 127/269 (47%), Gaps = 19/269 (7%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGS-KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY 338
           D +  + P+ L+S       S++ GS  H VL T  G++F+WG  +  +LG+G       
Sbjct: 82  DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLV 141

Query: 339 PKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
           P  I   L+   +  VACG +H+  +T  G+++ WG   +N G +G  S  +  IPR+V+
Sbjct: 142 PCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG--YNNSGQVGSGSTANQPIPRRVT 199

Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
           G ++   + +I CG   + A+   G+++ +G    G LG G   +   P  V  L+ ++ 
Sbjct: 200 GCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRV 259

Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
              +CG  HT  + +              +++ WG  + GQLG G+   +  P  V V  
Sbjct: 260 QRVACGYAHTLVLTD------------EGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK 307

Query: 518 DISFCKVACGHS--ITIALTATGQVFSMG 544
           D    ++A  HS   + A T  G V+  G
Sbjct: 308 D-RIIEIAACHSAHTSAAKTQGGHVYMWG 335



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 134/269 (49%), Gaps = 32/269 (11%)

Query: 380 GLLGQVSEISHWI-PRKVSGQMEGLQISSICCGPW-HTAAITSAGKLFTFGDGTFGALGH 437
           G LG V +I   I PR++   + G +I+S+  G   H    T+ G++FT+G   +  LG+
Sbjct: 76  GCLG-VGDIQSTIEPRRLD-SLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGN 133

Query: 438 GDRSSTSVPREVET-LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
           G  +   VP  + T L   + +  +CG +H+  +             S  ++F WG    
Sbjct: 134 GTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWGYNNS 181

Query: 497 GQLGHGDAE----PRVVPLCV--KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           GQ+G G       PR V  C+  KV  +IS     CG   ++A+  TG+V+  G    GQ
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQNKVVMNIS-----CGQMCSMAVVDTGEVYVWGYNGNGQ 236

Query: 551 LGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
           LG  GS+G  PT  R+   ++   ++ +ACG  H  V++ + ++Y WG  + GQLG G+ 
Sbjct: 237 LG-LGSSGNQPTPCRVAA-LQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNK 294

Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            N+  PT V   +D+ ++   C S  T+A
Sbjct: 295 SNQSYPTPVVVEKDRIIEIAACHSAHTSA 323



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 19/180 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK----VLESTVVLDAQSIACGSKHA 308
           G+VF WG            N  ++ S    +  +P+     L++ VV++   I+CG   +
Sbjct: 171 GEVFAWGYN----------NSGQVGSGSTANQPIPRRVTGCLQNKVVMN---ISCGQMCS 217

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           + V   G+++ WG    G+LG G   +   P  + AL G  +  VACG  HT  +T  G 
Sbjct: 218 MAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
           +Y W  G ++ G LG  ++ +   P  V  + + +   + C     +AA T  G ++ +G
Sbjct: 278 IYAW--GANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335


>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1095

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/325 (30%), Positives = 155/325 (47%), Gaps = 34/325 (10%)

Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH 359
           S+  G  H++ +   G +++WG    G+LG G     + P  +    G  +  +A GEFH
Sbjct: 653 SLGAGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRTTPTQVAGFTG--VSFLAAGEFH 710

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP---RKVSGQMEGLQISSICCGPWHTA 416
           + A+   G  + WG   ++ G LG  S   H+ P   R V  +        +  G   TA
Sbjct: 711 SVALRTDGTAWAWGS--NDKGQLGDGSARWHYAPTLSRLVGAR-------GLAAGDRFTA 761

Query: 417 AITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
           A  S G ++ +GD T+G LG G   +T  P +V  L +++ + A  G  H   +     K
Sbjct: 762 ARKSDGTVWAWGDNTYGQLGDGTTLATRSPAQVSGLTDVEGLAAGEG--HVVVV-----K 814

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
             G+       ++TWG+ A+GQLG G    R+VP   +V        VA G++ ++AL A
Sbjct: 815 MDGT-------VWTWGNNAKGQLGDGTTTRRLVP--TQVPGLTGVVAVAAGYAHSLALKA 865

Query: 537 TGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
            G V+  G   YGQLG   +T +  PT+ +G      +  +A G+YH     +   ++ W
Sbjct: 866 DGTVWGWGENIYGQLGDGTTTQRVAPTQAQG---LTVVLSMASGTYHGLARKADGTLWAW 922

Query: 596 GKGANGQLGHGDNENKQTPTLVEAL 620
           G  A+GQLG G    +  PTLV +L
Sbjct: 923 GYNAHGQLGIGTTTTRLAPTLVPSL 947



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 176/410 (42%), Gaps = 72/410 (17%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG+   NG LG   NG   S+ DR +      L   V     SIA G  HA+ V 
Sbjct: 468 GTVWAWGDNA-NGQLG---NG---STTDRSNPTQVPGLTGVV-----SIAAGPGHALAVK 515

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G +++WG+ + G+LG G   D   P  +  + G  +  VA G +H+  V + G ++ W
Sbjct: 516 ADGTLWTWGDNNTGQLGDGTTVDRPIPTQVPGVTG--VVSVAAGLYHSLVVKVDGTVWAW 573

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQ-ISSICCGPWHTAAITSAGKLFTFGDGT 431
           G       L G  + I     R V  Q   L  + +I  G +H+ A+ + G ++ +G   
Sbjct: 574 GSNYEGQ-LGGGTTTI-----RPVPSQTPNLTGVVAITAGLYHSLALKTDGTVWAWGYNL 627

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI--------------------- 470
            G LG+G+ ++  VP +V        V    G++H+ AI                     
Sbjct: 628 HGQLGNGNTTTQQVPTQVPGFS--GGVSLGAGIYHSLAIKTDGSVWTWGYNYRGQLGDGT 685

Query: 471 -------VEVAGKTSGSNGLSSKKL-----------FTWGDGAEGQLGHGDAEPRVVPLC 512
                   +VAG T G + L++ +            + WG   +GQLG G A     P  
Sbjct: 686 TTSRTTPTQVAGFT-GVSFLAAGEFHSVALRTDGTAWAWGSNDKGQLGDGSARWHYAPTL 744

Query: 513 VKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGST--GKFPTRIEGNIKH 570
            ++   +    +A G   T A  + G V++ G   YGQLG  G+T   + P ++ G    
Sbjct: 745 SRL---VGARGLAAGDRFTAARKSDGTVWAWGDNTYGQLGD-GTTLATRSPAQVSGLTD- 799

Query: 571 RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
             +E +A G  H+ VV     V+TWG  A GQLG G    +  PT V  L
Sbjct: 800 --VEGLAAGEGHVVVVKMDGTVWTWGNNAKGQLGDGTTTRRLVPTQVPGL 847



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 148/333 (44%), Gaps = 29/333 (8%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
           +A G  H + V   G +++WG+ + G+LG+G   D   P  + A    NI  V  G+ H+
Sbjct: 53  VAAGRHHTLAVRSDGTVWAWGDNAYGQLGNGSLQDQRVP--VRAWGLWNISAVGAGDLHS 110

Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
            A+   G ++TWG   +N G LG  +      P +V G  E   +  +  G  H+ A+ +
Sbjct: 111 LAMKSDGTVWTWGG--NNFGQLGDGTTTGRQAPVQVPGLGE---VVRVAAGFSHSLALKT 165

Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
            G ++ +G    G LG G  +   +P +V+ L  +K + A     H+ A+          
Sbjct: 166 DGTVWAWGSNGAGRLGDGTTTQRLMPVQVQGLPTIKAIAAGNA--HSLALD--------- 214

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
               + +++ WG  + GQLG   A  R++P  V    + +       HS+     A G  
Sbjct: 215 ---GTGRVWAWGSNSNGQLGDTTAGYRMLPALVPGLTNATGLSAGSNHSLV--RQADGTT 269

Query: 541 FSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGA 599
           +  G+  YGQLG   +T +  P ++ G      ++ +     H  V+ S   V+TWG   
Sbjct: 270 WVWGANTYGQLGDGTTTSRSAPQQVSGLAG---VDGVLGAELHSLVLKSDGTVWTWGSNQ 326

Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
            GQLG G  E +  P  V  L    V +V  GS
Sbjct: 327 RGQLGDGTQEQRLVPVQVMGLSG--VVAVAAGS 357



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 177/422 (41%), Gaps = 65/422 (15%)

Query: 237 VSSSSQGSCHE-DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVV 295
           + + + G+ H    DG G V+ WG    NG LG    G  +       AL+P +  +T  
Sbjct: 200 IKAIAAGNAHSLALDGTGRVWAWGSN-SNGQLGDTTAGYRM-----LPALVPGLTNAT-- 251

Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
                ++ GS H+++    G  + WG  + G+LG G     S P+ +  L G  +  V  
Sbjct: 252 ----GLSAGSNHSLVRQADGTTWVWGANTYGQLGDGTTTSRSAPQQVSGLAG--VDGVLG 305

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
            E H+  +   G ++TWG   +  G LG  ++    +P +V G + G+   +   G  H+
Sbjct: 306 AELHSLVLKSDGTVWTWGS--NQRGQLGDGTQEQRLVPVQVMG-LSGVVAVAAGSGQ-HS 361

Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA------------SCG 463
            A+ + G+++T+G    G LG G  S ++VP+    L E  +V A            +  
Sbjct: 362 VAVMANGEVWTWGHNVEGQLGEGSSSYSAVPKRSHALVERTSVAAGRYHGLASKPDGTVW 421

Query: 464 VWHTAA-----------------------IVEVAGKTSGSNGLSSK-KLFTWGDGAEGQL 499
            W   A                       +V VA     S  L +   ++ WGD A GQL
Sbjct: 422 AWGDNAKGQLGDGTTAQRLLPTQVPGLTNMVAVAAGHHSSLALKADGTVWAWGDNANGQL 481

Query: 500 GHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK 559
           G+G    R  P   +V        +A G    +A+ A G +++ G  + GQLG   +  +
Sbjct: 482 GNGSTTDRSNP--TQVPGLTGVVSIAAGPGHALAVKADGTLWTWGDNNTGQLGDGTTVDR 539

Query: 560 -FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK----QTP 614
             PT++ G      +  +A G YH  VV     V+ WG    GQLG G    +    QTP
Sbjct: 540 PIPTQVPGVTG---VVSVAAGLYHSLVVKVDGTVWAWGSNYEGQLGGGTTTIRPVPSQTP 596

Query: 615 TL 616
            L
Sbjct: 597 NL 598



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 173/388 (44%), Gaps = 42/388 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G V+ WG   G G LG      + ++  R   L+P  ++    + A  IA G+ H++ + 
Sbjct: 167 GTVWAWGSN-GAGRLG------DGTTTQR---LMPVQVQGLPTIKA--IAAGNAHSLALD 214

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
             G++++WG  S G+LG         P L+  L  +N   ++ G  H+      G  + W
Sbjct: 215 GTGRVWAWGSNSNGQLGDTTAGYRMLPALVPGL--TNATGLSAGSNHSLVRQADGTTWVW 272

Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
           G   +  G LG  +  S   P++VSG + G  +  +     H+  + S G ++T+G    
Sbjct: 273 G--ANTYGQLGDGTTTSRSAPQQVSG-LAG--VDGVLGAELHSLVLKSDGTVWTWGSNQR 327

Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWG 492
           G LG G +    VP +V  L  +  V A  G  H+ A+            +++ +++TWG
Sbjct: 328 GQLGDGTQEQRLVPVQVMGLSGVVAVAAGSGQ-HSVAV------------MANGEVWTWG 374

Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
              EGQLG G +    VP   +    +    VA G    +A    G V++ G    GQLG
Sbjct: 375 HNVEGQLGEGSSSYSAVPK--RSHALVERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLG 432

Query: 553 SPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
             G+T +   PT++ G      +  +A G +    + +   V+ WG  ANGQLG+G   +
Sbjct: 433 D-GTTAQRLLPTQVPGLTN---MVAVAAGHHSSLALKADGTVWAWGDNANGQLGNGSTTD 488

Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           +  PT V  L    V S+  G     A+
Sbjct: 489 RSNPTQVPGLTG--VVSIAAGPGHALAV 514



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 139/312 (44%), Gaps = 34/312 (10%)

Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISS 407
           S + +VA G  HT AV   G ++ WGD  +  G LG  S     +P +  G      IS+
Sbjct: 48  SRLGLVAAGRHHTLAVRSDGTVWAWGDNAY--GQLGNGSLQDQRVPVRAWGLWN---ISA 102

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
           +  G  H+ A+ S G ++T+G   FG LG G  +    P +V  L E+  V  + G  H+
Sbjct: 103 VGAGDLHSLAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPVQVPGLGEV--VRVAAGFSHS 160

Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG 527
            A+     KT G+       ++ WG    G+LG G    R++P  V+V    +   +A G
Sbjct: 161 LAL-----KTDGT-------VWAWGSNGAGRLGDGTTTQRLMP--VQVQGLPTIKAIAAG 206

Query: 528 HSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVV 586
           ++ ++AL  TG+V++ GS   GQLG   +  +  P  + G         ++ GS H  V 
Sbjct: 207 NAHSLALDGTGRVWAWGSNSNGQLGDTTAGYRMLPALVPGLTN---ATGLSAGSNHSLVR 263

Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSI 646
            +    + WG    GQLG G   ++  P  V  L          G +      LH  V  
Sbjct: 264 QADGTTWVWGANTYGQLGDGTTTSRSAPQQVSGL---------AGVDGVLGAELHSLVLK 314

Query: 647 ADHSICSGCRNQ 658
           +D ++ +   NQ
Sbjct: 315 SDGTVWTWGSNQ 326



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 153/328 (46%), Gaps = 29/328 (8%)

Query: 295  VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA 354
            ++ A+ +A G +        G +++WG+ + G+LG G       P  +  L  +++  +A
Sbjct: 747  LVGARGLAAGDRFTAARKSDGTVWAWGDNTYGQLGDGTTLATRSPAQVSGL--TDVEGLA 804

Query: 355  CGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
             GE H   V + G ++TWG+  +  G LG  +     +P +V G + G  + ++  G  H
Sbjct: 805  AGEGHVVVVKMDGTVWTWGN--NAKGQLGDGTTTRRLVPTQVPG-LTG--VVAVAAGYAH 859

Query: 415  TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
            + A+ + G ++ +G+  +G LG G  +    P + + L  + + MAS G +H      +A
Sbjct: 860  SLALKADGTVWGWGENIYGQLGDGTTTQRVAPTQAQGLTVVLS-MAS-GTYH-----GLA 912

Query: 475  GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV-KVSDDISFCKVACGHSITIA 533
             K  G+       L+ WG  A GQLG G    R+ P  V  +S  +S       H  ++A
Sbjct: 913  RKADGT-------LWAWGYNAHGQLGIGTTTTRLAPTLVPSLSGVVSLSAT---HQHSLA 962

Query: 534  LTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
            L   G V++ G    GQLG   +T +  PT+         ++ ++ G  +   V +   V
Sbjct: 963  LKPDGTVWAWGYNSNGQLGDGTTTTRHVPTQAP---SLSSVKAVSAGFEYSLAVKADGTV 1019

Query: 593  YTWGKGANGQLGHGDNENKQTPTLVEAL 620
            ++WG    GQLG G    + TPT V  L
Sbjct: 1020 WSWGINDRGQLGSGTATPRATPTQVAGL 1047



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 171/431 (39%), Gaps = 108/431 (25%)

Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
           G V+ WG+     LGNG L              +D  +P  + +  + +  ++  G  H+
Sbjct: 67  GTVWAWGDNAYGQLGNGSL--------------QDQRVP--VRAWGLWNISAVGAGDLHS 110

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           + +   G +++WG  + G+LG G       P  +  L    +  VA G  H+ A+   G 
Sbjct: 111 LAMKSDGTVWTWGGNNFGQLGDGTTTGRQAPVQVPGLG--EVVRVAAGFSHSLALKTDGT 168

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTF 427
           ++ WG   +  G LG  +     +P     Q++GL  I +I  G  H+ A+   G+++ +
Sbjct: 169 VWAWGS--NGAGRLGDGTTTQRLMPV----QVQGLPTIKAIAAGNAHSLALDGTGRVWAW 222

Query: 428 G------------------------------------------DG--------TFGALGH 437
           G                                          DG        T+G LG 
Sbjct: 223 GSNSNGQLGDTTAGYRMLPALVPGLTNATGLSAGSNHSLVRQADGTTWVWGANTYGQLGD 282

Query: 438 GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEG 497
           G  +S S P++V  L  +  V+        A +  +  K+ G+       ++TWG    G
Sbjct: 283 GTTTSRSAPQQVSGLAGVDGVLG-------AELHSLVLKSDGT-------VWTWGSNQRG 328

Query: 498 QLGHGDAEPRVVPLCVKVSDDISFCKVACG---HSITIALTATGQVFSMGSADYGQLGSP 554
           QLG G  E R+VP  V+V        VA G   HS  +A+ A G+V++ G    GQLG  
Sbjct: 329 QLGDGTQEQRLVP--VQVMGLSGVVAVAAGSGQHS--VAVMANGEVWTWGHNVEGQLGEG 384

Query: 555 GST-GKFPTRIEGNIKHRYIE--DIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
            S+    P R      H  +E   +A G YH         V+ WG  A GQLG G    +
Sbjct: 385 SSSYSAVPKR-----SHALVERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGTTAQR 439

Query: 612 QTPTLVEALRD 622
             PT V  L +
Sbjct: 440 LLPTQVPGLTN 450



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 146/323 (45%), Gaps = 29/323 (8%)

Query: 297  DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG 356
            D + +A G  H V+V   G +++WG  + G+LG G       P  +  L G  +  VA G
Sbjct: 799  DVEGLAAGEGHVVVVKMDGTVWTWGNNAKGQLGDGTTTRRLVPTQVPGLTG--VVAVAAG 856

Query: 357  EFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS-SICCGPWHT 415
              H+ A+   G ++ WG+ I+  G LG  +       R    Q +GL +  S+  G +H 
Sbjct: 857  YAHSLALKADGTVWGWGENIY--GQLGDGTTTQ----RVAPTQAQGLTVVLSMASGTYHG 910

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
             A  + G L+ +G    G LG G  ++   P  V +L  + ++ A+    H+ A+     
Sbjct: 911  LARKADGTLWAWGYNAHGQLGIGTTTTRLAPTLVPSLSGVVSLSATHQ--HSLAL----- 963

Query: 476  KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
            K  G+       ++ WG  + GQLG G    R VP   +     S   V+ G   ++A+ 
Sbjct: 964  KPDGT-------VWAWGYNSNGQLGDGTTTTRHVP--TQAPSLSSVKAVSAGFEYSLAVK 1014

Query: 536  ATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
            A G V+S G  D GQLGS  +T +  PT++ G      +  +     H  VVS+   +  
Sbjct: 1015 ADGTVWSWGINDRGQLGSGTATPRATPTQVAG---LNSVTLLLAARAHALVVSADGTMRG 1071

Query: 595  WGKGANGQLGHGDNENKQTPTLV 617
            +G    GQLG GD   +  P  V
Sbjct: 1072 FGDNEAGQLGAGDTLIRLAPNQV 1094



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 28/202 (13%)

Query: 444 SVPREVETLKELKTV----MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQL 499
           S P E+ T K  +T     + + G  HT A+             S   ++ WGD A GQL
Sbjct: 33  SSPDELATAKAAETASRLGLVAAGRHHTLAV------------RSDGTVWAWGDNAYGQL 80

Query: 500 GHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK 559
           G+G  + + VP  V+     +   V  G   ++A+ + G V++ G  ++GQLG   +TG+
Sbjct: 81  GNGSLQDQRVP--VRAWGLWNISAVGAGDLHSLAMKSDGTVWTWGGNNFGQLGDGTTTGR 138

Query: 560 -FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN--GQLGHGDNENKQTPTL 616
             P ++ G  +   +  +A G  H   ++ K++   W  G+N  G+LG G    +  P  
Sbjct: 139 QAPVQVPGLGE---VVRVAAGFSH--SLALKTDGTVWAWGSNGAGRLGDGTTTQRLMPVQ 193

Query: 617 VEALRDKQVKSVVCGSNFTAAI 638
           V+ L    +K++  G+  + A+
Sbjct: 194 VQGL--PTIKAIAAGNAHSLAL 213


>gi|119571522|gb|EAW51137.1| NIMA (never in mitosis gene a)- related kinase 8, isoform CRA_c
           [Homo sapiens]
          Length = 699

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 149/348 (42%), Gaps = 59/348 (16%)

Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW---- 372
           +++WG G G             P  +  LN + +  VA G      VT SG L  W    
Sbjct: 327 VYAWGGGLG------------TPLRLPMLN-TEVVQVAAGRTQKAGVTRSGRLILWEAPP 373

Query: 373 -GDGIHNLGLLGQVSEIS-HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
            G G  +L L G V +    +I R + GQ  G+ I  + CG + TA +T  G + TFG G
Sbjct: 374 LGAGGGSL-LPGAVEQPQPQFISRFLEGQ-SGVTIKHVACGDFFTACLTDRGIIMTFGSG 431

Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
           + G LGHG  +  S P  VE L   + V  +CG  H  A+             + ++LF 
Sbjct: 432 SNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALS------------TERELFA 479

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           WG G  G+LG G  E    P  V +       +V CG   ++ LT  GQ  + GS  + +
Sbjct: 480 WGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNK 539

Query: 551 LGSPG-STGKFPTRIEGNIKHRYIED-------------------IACGSYHIAVVSSKS 590
           LG    S G+ P      + H+ +E+                   I  G+ H A V++  
Sbjct: 540 LGLDHLSLGEEP------VPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASG 593

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
           + YT+G   +GQLG       + P  V+ L   ++  V CG  FT AI
Sbjct: 594 DCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAI 641



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 180/408 (44%), Gaps = 54/408 (13%)

Query: 252 LGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
           L  V+ WG GLG  L                   LP +L + VV     +A G      V
Sbjct: 324 LSSVYAWGGGLGTPLR------------------LP-MLNTEVV----QVAAGRTQKAGV 360

Query: 312 TKQGQIFSW-----GEGSGGKLGHGVEADVS--YPKLIDALNGSNIHMVACGEFHTCAVT 364
           T+ G++  W     G G G  L   VE        + ++  +G  I  VACG+F T  +T
Sbjct: 361 TRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVTIKHVACGDFFTACLT 420

Query: 365 LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
             G + T+G G +     G +++IS   P  V   + G ++  + CG  H  A+++  +L
Sbjct: 421 DRGIIMTFGSGSNGCLGHGSLTDISQ--PTIVEALL-GYEMVQVACGASHVLALSTEREL 477

Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT--SGSNG 482
           F +G G  G LG G R S S P++V      +     CG+  ++ I+ V G+    GSN 
Sbjct: 478 FAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGI-DSSMILTVPGQALACGSNR 536

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRV-------VPLCVKVSDDISFCKVACGHSITIALT 535
            +   L     G E  + H   E  +        PL     D      +  G + + A+T
Sbjct: 537 FNKLGLDHLSLGEE-PVPHQQVEEALSFTLLGSAPL-----DQEPLLSIDLGTAHSAAVT 590

Query: 536 ATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
           A+G  ++ GS  +GQLG+    G + P +++G ++   +  +ACG      + ++SEVY+
Sbjct: 591 ASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQG-LEGIKMAMVACGDAFTVAIGAESEVYS 649

Query: 595 WGKGANGQLGHGDNE-NKQTPTLVEALRDKQVKSVVC--GSNFTAAIC 639
           WGKGA G+LG  D +     P  ++      V SV C  G+   A  C
Sbjct: 650 WGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSCCHGNTLLAVRC 697


>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
          Length = 527

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 23/314 (7%)

Query: 291 ESTVVLDAQSIACGS--KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
           E  + L  Q+   GS     +  T   +IF  G    G LG G       P+ +D+LNG 
Sbjct: 15  EEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVRSTIEPRRLDSLNGK 74

Query: 349 NIHMVACGEF-HTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQIS 406
            I  ++ G   H    T  G+++TWG   HN    LG  +     +P  +S  +   Q+ 
Sbjct: 75  KIACLSYGSGPHIVLATTEGEVFTWG---HNAYSQLGNGTTNHGLVPCHISTNLSNKQVI 131

Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVW 465
            + CG +H+  +TS G++F +G    G +G G   +  +PR V    + K V+  +CG  
Sbjct: 132 EVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQM 191

Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
              A+V+            + +++ WG    GQLG G++  +  P  V     I   +VA
Sbjct: 192 CCMAVVD------------TGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVA 239

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIA 584
           CG++ T+ LT  GQV++ G+  YGQLG+   + + +PT +    K R IE  AC S H +
Sbjct: 240 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE-KDRIIEIAACHSTHTS 298

Query: 585 VVSSK-SEVYTWGK 597
              ++   VY WG+
Sbjct: 299 AAKTQGGHVYMWGQ 312



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 109/220 (49%), Gaps = 17/220 (7%)

Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
           ++F  G    G LG GD  ST  PR +++L   K    S G      +    G+      
Sbjct: 42  EIFVLGTNCCGCLGLGDVRSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGE------ 95

Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS---FCKVACGHSITIALTATGQ 539
                +FTWG  A  QLG+G     +VP    +S ++S     +VACG   ++ LT+ G+
Sbjct: 96  -----VFTWGHNAYSQLGNGTTNHGLVP--CHISTNLSNKQVIEVACGSYHSLVLTSDGE 148

Query: 540 VFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           VF+ G  + GQ+GS  +  +  P R+ G ++++ +  IACG      V    EVY WG  
Sbjct: 149 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 208

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
            NGQLG G++ N+ TP  V AL+  +V+ V CG   T  +
Sbjct: 209 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 248



 Score =  112 bits (280), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 131/272 (48%), Gaps = 25/272 (9%)

Query: 280 DRRDALLPKVLESTVVLDAQSIACGS----KHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
           D R  + P+ L+S   L+ + IAC S     H VL T +G++F+WG  +  +LG+G    
Sbjct: 58  DVRSTIEPRRLDS---LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNH 114

Query: 336 VSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
              P  I   L+   +  VACG +H+  +T  G+++ WG   +N G +G  S ++  IPR
Sbjct: 115 GLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG--YNNSGQVGSGSTVNQPIPR 172

Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
           +V+G ++   + +I CG     A+   G+++ +G    G LG G+  +   P  V  L+ 
Sbjct: 173 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 232

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
           ++    +CG  HT  + +              +++ WG  + GQLG G+   +  P  V 
Sbjct: 233 IRVQRVACGYAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSYPTPVT 280

Query: 515 VSDDISFCKVACGHS--ITIALTATGQVFSMG 544
           V  D    ++A  HS   + A T  G V+  G
Sbjct: 281 VEKD-RIIEIAACHSTHTSAAKTQGGHVYMWG 311



 Score =  103 bits (258), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 25/234 (10%)

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAA 469
           GP H    T+ G++FT+G   +  LG+G  +   VP  + T L   + +  +CG +H+  
Sbjct: 84  GP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLV 142

Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVA 525
           +             S  ++F WG    GQ+G G       PR V  C++    ++   +A
Sbjct: 143 LT------------SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT---IA 187

Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHI 583
           CG    +A+  TG+V+  G    GQLG  G++G  PT  R+   ++   ++ +ACG  H 
Sbjct: 188 CGQMCCMAVVDTGEVYVWGYNGNGQLGL-GNSGNQPTPCRVAA-LQGIRVQRVACGYAHT 245

Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
            V++ + +VY WG  + GQLG G+  N+  PT V   +D+ ++   C S  T+A
Sbjct: 246 LVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 299



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 21/181 (11%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK----VLESTVVLDAQSIACGSKHA 308
           G+VF WG            N  ++ S    +  +P+     L++ VV+   +IACG    
Sbjct: 147 GEVFAWGYN----------NSGQVGSGSTVNQPIPRRVTGCLQNKVVV---TIACGQMCC 193

Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
           + V   G+++ WG    G+LG G   +   P  + AL G  +  VACG  HT  +T  G 
Sbjct: 194 MAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 253

Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT-AAITSAGKLFTF 427
           +Y W  G ++ G LG  ++ +   P  V+ + + + I    C   HT AA T  G ++ +
Sbjct: 254 VYAW--GANSYGQLGTGNKSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMW 310

Query: 428 G 428
           G
Sbjct: 311 G 311


>gi|408500676|ref|YP_006864595.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465500|gb|AFU71029.1| RCC1 domain-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1193

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 185/430 (43%), Gaps = 68/430 (15%)

Query: 253  GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
            G+ + WG      LG+G        V +   DR+    P + E    +    ++ G  ++
Sbjct: 694  GNAYAWGSNSYGRLGDGTATQRTTPVLVKKPDRK--TYPDLPEDFTYM---QVSAGDYYS 748

Query: 309  VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI-------DALNGSNIHMVACGEFHTC 361
            + V   G +++WG  S G+LG+   +    P  +       DA  G     V+ G++H+ 
Sbjct: 749  LAVGSDGYVYAWGYNSYGQLGNNSTSSSYVPVRVRDPASPNDASKGLKAIQVSAGDYHSL 808

Query: 362  AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV------SGQMEGLQISSICCGPWHT 415
            A+   G  Y WGDG +  G LG  S  S ++P +V      +   +GL+ + +  G  H+
Sbjct: 809  ALGSDGYAYAWGDGSY--GKLGNNSRSSSYVPVRVRDPDSPNDASKGLKATQVSAGQNHS 866

Query: 416  AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV-------ETLKELKTVMASCGVWHTA 468
             A+ S G  + +GDG++G LG+   SS+SVP  V       +T K LK    S G  H+ 
Sbjct: 867  LAVGSDGYAYAWGDGSYGKLGNYSTSSSSVPVRVRDPASPTDTSKGLKAAQISAGYGHSL 926

Query: 469  AIVEVAGKTSGSNGLSSKKLFTWG-DGAEGQLGHGDAEPRVVPLCVKVSDDIS------- 520
            A+        GS+G +    + WG +    QLG+  +    VP+ V+  D  S       
Sbjct: 927  AV--------GSDGYA----YAWGLNDYYHQLGNNSSSNSSVPVRVRDPDSPSDASKGLK 974

Query: 521  FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIE----------GNIKH 570
              +V+ G   ++A+   G  ++ G  D GQLG  GS   +P  ++               
Sbjct: 975  ATQVSAGQEHSLAVDKDGNAYAWGDNDNGQLGIKGSGRPYPYPMKVLSSAQSTSAAGPWM 1034

Query: 571  RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVV- 629
            R ++ I  G +H   + +      WG   +G+LG G    K  P  V A   + V S V 
Sbjct: 1035 RAVQ-ITAGDHHSLAIGTDGNTKAWGSNRDGRLGDGTTNTKWAPVPV-AFNLQPVISAVR 1092

Query: 630  ----CGSNFT 635
                 G+N T
Sbjct: 1093 FDTSAGTNLT 1102



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 148/334 (44%), Gaps = 51/334 (15%)

Query: 308  AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI---------DALNGSNIHMVACGEF 358
            ++ V   G  ++WG  S G+LG G     + P L+         D         V+ G++
Sbjct: 687  SLAVGSDGNAYAWGSNSYGRLGDGTATQRTTPVLVKKPDRKTYPDLPEDFTYMQVSAGDY 746

Query: 359  HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV------SGQMEGLQISSICCGP 412
            ++ AV   G +Y WG   ++ G LG  S  S ++P +V      +   +GL+   +  G 
Sbjct: 747  YSLAVGSDGYVYAWG--YNSYGQLGNNSTSSSYVPVRVRDPASPNDASKGLKAIQVSAGD 804

Query: 413  WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV-------ETLKELKTVMASCGVW 465
            +H+ A+ S G  + +GDG++G LG+  RSS+ VP  V       +  K LK    S G  
Sbjct: 805  YHSLALGSDGYAYAWGDGSYGKLGNNSRSSSYVPVRVRDPDSPNDASKGLKATQVSAGQN 864

Query: 466  HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK-------VSDD 518
            H+ A+        GS+G +    + WGDG+ G+LG+       VP+ V+        S  
Sbjct: 865  HSLAV--------GSDGYA----YAWGDGSYGKLGNYSTSSSSVPVRVRDPASPTDTSKG 912

Query: 519  ISFCKVACGHSITIALTATGQVFSMGSAD-YGQLG-SPGSTGKFPTRIEGN------IKH 570
            +   +++ G+  ++A+ + G  ++ G  D Y QLG +  S    P R+          K 
Sbjct: 913  LKAAQISAGYGHSLAVGSDGYAYAWGLNDYYHQLGNNSSSNSSVPVRVRDPDSPSDASKG 972

Query: 571  RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
                 ++ G  H   V      Y WG   NGQLG
Sbjct: 973  LKATQVSAGQEHSLAVDKDGNAYAWGDNDNGQLG 1006



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 86/195 (44%), Gaps = 32/195 (16%)

Query: 476 KTSGSNGL---------SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD--------- 517
           + SGSN L         S    + WG  + G+LG G A  R  P+ VK  D         
Sbjct: 675 QISGSNDLTYGFSLAVGSDGNAYAWGSNSYGRLGDGTATQRTTPVLVKKPDRKTYPDLPE 734

Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEG----NIKHRY 572
           D ++ +V+ G   ++A+ + G V++ G   YGQLG+  ++  + P R+      N   + 
Sbjct: 735 DFTYMQVSAGDYYSLAVGSDGYVYAWGYNSYGQLGNNSTSSSYVPVRVRDPASPNDASKG 794

Query: 573 IEDI--ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLV-------EALRDK 623
           ++ I  + G YH   + S    Y WG G+ G+LG+    +   P  V       +A +  
Sbjct: 795 LKAIQVSAGDYHSLALGSDGYAYAWGDGSYGKLGNNSRSSSYVPVRVRDPDSPNDASKGL 854

Query: 624 QVKSVVCGSNFTAAI 638
           +   V  G N + A+
Sbjct: 855 KATQVSAGQNHSLAV 869



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 93/224 (41%), Gaps = 35/224 (15%)

Query: 417 AITSAGKLFTFGDGTFGALGHGDRSSTSVP--------REVETLKELKTVM-ASCGVWHT 467
           A+ S G  + +G  ++G LG G  +  + P        +    L E  T M  S G +++
Sbjct: 689 AVGSDGNAYAWGSNSYGRLGDGTATQRTTPVLVKKPDRKTYPDLPEDFTYMQVSAGDYYS 748

Query: 468 AAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK-------VSDDIS 520
            A+        GS+G     ++ WG  + GQLG+       VP+ V+        S  + 
Sbjct: 749 LAV--------GSDGY----VYAWGYNSYGQLGNNSTSSSYVPVRVRDPASPNDASKGLK 796

Query: 521 FCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGN------IKHRYI 573
             +V+ G   ++AL + G  ++ G   YG+LG+   +  + P R+          K    
Sbjct: 797 AIQVSAGDYHSLALGSDGYAYAWGDGSYGKLGNNSRSSSYVPVRVRDPDSPNDASKGLKA 856

Query: 574 EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLV 617
             ++ G  H   V S    Y WG G+ G+LG+    +   P  V
Sbjct: 857 TQVSAGQNHSLAVGSDGYAYAWGDGSYGKLGNYSTSSSSVPVRV 900


>gi|350418736|ref|XP_003491950.1| PREDICTED: hypothetical protein LOC100748540 [Bombus impatiens]
          Length = 791

 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 179/398 (44%), Gaps = 58/398 (14%)

Query: 281 RRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPK 340
           RRD +L             SI CG +H+ ++ + G++F +G    G+LG G +  +S P 
Sbjct: 34  RRDPVL-------------SITCGDEHSAVICQTGRLFVFGSNDWGQLGLGHKNHISKPS 80

Query: 341 LIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQ-VSEISHWIPRKV--- 396
            + AL    +  VACG  HT   T S  ++  G      G LG+ +S I   +   V   
Sbjct: 81  CVKALKPERVTHVACGRAHTLICTGSQKIFACGSDQE--GQLGRGISAIGDSVNTPVLVY 138

Query: 397 -SGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSS-TSVPREVETLKE 454
            SG + G +I  I  G  H+ A+TS G +F +G    G LG  D S   + P +V   + 
Sbjct: 139 DSG-LSGSKIVQIAAGSHHSLALTSDGGVFAWGSNLEGQLGLPDVSGLVNKPTKVHIPEP 197

Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLG-HGDAEPRVVPLCV 513
           +K +  S G +H+  + E        +GL    ++  G+   G+LG       +V P  +
Sbjct: 198 VKQI--SAGYYHSTFLTE--------SGL----VYVCGESESGKLGIDASFSTQVAPKQM 243

Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ--LGSPGSTGKFPTRI-EGNIKH 570
           ++        VACG   T+ L   G ++  GS   GQ  LG+  S    P  +  G +++
Sbjct: 244 QLPS--PAVHVACGGHHTVILAENGNLYCTGSNSSGQLGLGTNLSELHIPKLLPRGMLRN 301

Query: 571 RYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK-QTPTLVEALRDKQVKSVV 629
             I  I+CG  H AVV+   ++YT G G +G+LG  +NEN     T V+  ++  V  V 
Sbjct: 302 ETITRISCGESHTAVVTESGKLYTCGDGRHGKLGLEENENNVHELTFVQRYKELFVSDVA 361

Query: 630 CGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHN 667
           CG       C         H+I  G R   N R ++ +
Sbjct: 362 CGG------C---------HTILVGQRRDTNNRSQKED 384



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 175/387 (45%), Gaps = 49/387 (12%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA---DVSYPKLI--DALNGSNIHMVAC 355
           +ACG  H ++ T   +IF+ G    G+LG G+ A    V+ P L+    L+GS I  +A 
Sbjct: 93  VACGRAHTLICTGSQKIFACGSDQEGQLGRGISAIGDSVNTPVLVYDSGLSGSKIVQIAA 152

Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWI--PRKVSGQMEGLQISSICCGPW 413
           G  H+ A+T  G ++ WG  +   G LG + ++S  +  P KV       QIS+   G +
Sbjct: 153 GSHHSLALTSDGGVFAWGSNLE--GQLG-LPDVSGLVNKPTKVHIPEPVKQISA---GYY 206

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIVE 472
           H+  +T +G ++  G+   G LG     ST V P++++       V  +CG  HT  + E
Sbjct: 207 HSTFLTESGLVYVCGESESGKLGIDASFSTQVAPKQMQLPS--PAVHVACGGHHTVILAE 264

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD--AE---PRVVPLCVKVSDDISFCKVACG 527
                   NG     L+  G  + GQLG G   +E   P+++P  +  ++ I+  +++CG
Sbjct: 265 --------NG----NLYCTGSNSSGQLGLGTNLSELHIPKLLPRGMLRNETIT--RISCG 310

Query: 528 HSITIALTATGQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVV 586
            S T  +T +G++++ G   +G+LG                 K  ++ D+ACG  H  +V
Sbjct: 311 ESHTAVVTESGKLYTCGDGRHGKLGLEENENNVHELTFVQRYKELFVSDVACGGCHTILV 370

Query: 587 SSKSEVYTWG-KGANGQLGHGDNENKQTPTLVEALR------DKQVKSVV-----CGSNF 634
             + +      K  N Q  H    N   P  +   R      D+ V  ++      G+N 
Sbjct: 371 GQRRDTNNRSQKEDNSQTEHIQKRNSLPPLKLPVNRLQSETHDENVNEIIKDRLNQGNNI 430

Query: 635 TAAIC-LHKGVSIADHSICSGCRNQFN 660
           T ++    + V  +  +I    +N+ +
Sbjct: 431 TESVTNAQEAVETSMETIEENIKNKVD 457



 Score = 42.7 bits (99), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 15/109 (13%)

Query: 533 ALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN--IKHRYIEDIACGSYHIAVVSSKS 590
            +  TG VF++G +            +F   +  +  I+   +  I CG  H AV+    
Sbjct: 8   TIPETGAVFTIGRS------------RFADNVASHFFIRRDPVLSITCGDEHSAVICQTG 55

Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
            ++ +G    GQLG G   +   P+ V+AL+ ++V  V CG   T  IC
Sbjct: 56  RLFVFGSNDWGQLGLGHKNHISKPSCVKALKPERVTHVACGRAHT-LIC 103


>gi|307109549|gb|EFN57787.1| hypothetical protein CHLNCDRAFT_10671, partial [Chlorella
           variabilis]
          Length = 272

 Score =  123 bits (309), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 88/270 (32%), Positives = 129/270 (47%), Gaps = 19/270 (7%)

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           W  G  ++G LG  S    ++PR V G ++   + ++  G  HTAA+TS G+L+  G   
Sbjct: 3   WVFGRGDMGQLGDGSTEDVFVPRLVKG-LKSRDVVNLAAGALHTAAVTSDGELYVMGSNE 61

Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
              LG   RS    P  V  L++ +    +CG  HT A+V+     +            +
Sbjct: 62  ESQLGVRQRSDALAPTRVTALEQFQVQRVACGPAHTLAVVDGGAVAA------------F 109

Query: 492 GDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
           G    GQ+G G    RV +P  VK    +   +VA G S T+AL++TG VFS G+  +G 
Sbjct: 110 GSAEYGQVGLGPCGARVELPRVVKDLRSMHIVRVAAGGSHTLALSSTGGVFSCGNGSFGA 169

Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL-----GH 605
           LG   + G    R    +    +  IACG  H A +++   V TWG+G +  L     GH
Sbjct: 170 LGRGTTEGNDVPRPISRLWPLGVVQIACGENHSAAITADGRVLTWGRGKHRLLPAFHCGH 229

Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
           GD EN  TP  V+AL+    + V CG + T
Sbjct: 230 GDFENCSTPKPVQALKGIVGRQVSCGDDHT 259



 Score =  116 bits (290), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 84/278 (30%), Positives = 125/278 (44%), Gaps = 25/278 (8%)

Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
           ++      D  +P++++     D  ++A G+ H   VT  G+++  G     +LG    +
Sbjct: 12  QLGDGSTEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSNEESQLGVRQRS 71

Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD---GIHNLGLLGQVSEISHW 391
           D   P  + AL    +  VACG  HT AV   G +  +G    G   LG  G   E+   
Sbjct: 72  DALAPTRVTALEQFQVQRVACGPAHTLAVVDGGAVAAFGSAEYGQVGLGPCGARVEL--- 128

Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
            PR V   +  + I  +  G  HT A++S G +F+ G+G+FGALG G      VPR +  
Sbjct: 129 -PRVVK-DLRSMHIVRVAAGGSHTLALSSTGGVFSCGNGSFGALGRGTTEGNDVPRPISR 186

Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQL-----GHGDAEP 506
           L  L  V  +CG  H+AAI             +  ++ TWG G    L     GHGD E 
Sbjct: 187 LWPLGVVQIACGENHSAAIT------------ADGRVLTWGRGKHRLLPAFHCGHGDFEN 234

Query: 507 RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
              P  V+    I   +V+CG   T+ LT  G V++ G
Sbjct: 235 CSTPKPVQALKGIVGRQVSCGDDHTVLLTEDGSVYAWG 272



 Score = 62.4 bits (150), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/100 (35%), Positives = 49/100 (49%)

Query: 539 QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
           +V+  G  D GQLG   +   F  R+   +K R + ++A G+ H A V+S  E+Y  G  
Sbjct: 1   EVWVFGRGDMGQLGDGSTEDVFVPRLVKGLKSRDVVNLAAGALHTAAVTSDGELYVMGSN 60

Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
              QLG     +   PT V AL   QV+ V CG   T A+
Sbjct: 61  EESQLGVRQRSDALAPTRVTALEQFQVQRVACGPAHTLAV 100


>gi|224114984|ref|XP_002316910.1| predicted protein [Populus trichocarpa]
 gi|222859975|gb|EEE97522.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 144/322 (44%), Gaps = 22/322 (6%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGEFH 359
           ++    HA  V + G++F+ G+ S    GH      +  P+L++AL G     VA G   
Sbjct: 168 VSASHNHAAFVLQSGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALKGVPCKQVAVGLNF 227

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAI 418
           T  +T  G LYT G   H  G LG         P K+   +EG+  +  I  GP +  A+
Sbjct: 228 TVFLTRQGQLYTCGTNTH--GQLGHGDTQDRPTP-KIIELLEGVGSVVQIAAGPSYVLAV 284

Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL--KELKTVMASCGVWHTAAIVEVAGK 476
           T  G +++FG G+   LGHG++     PR ++T   K++  V  S G  H  A+      
Sbjct: 285 TDNGVVYSFGSGSNLCLGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVALD----- 339

Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
                  SS  +++WG G  G LGHGD   + +P  V         +V      T  L  
Sbjct: 340 -------SSGFVYSWGKGYCGALGHGDEIDKTLPALVNCLKSHLAVQVCARKRKTFVLVD 392

Query: 537 TGQVFSMGSADYGQLGSPG---STGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVY 593
            G V+  G   +G LG P    S      R+  +++ R++  I+ G YH  VV+++ +++
Sbjct: 393 GGSVYGFGWMGFGSLGFPDRGLSDKVMRPRVLDSLRARHVSQISTGLYHTVVVTNQGQMF 452

Query: 594 TWGKGANGQLGHGDNENKQTPT 615
            +G     QLGH        PT
Sbjct: 453 GFGDNERAQLGHDTLRGCLQPT 474



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 136/287 (47%), Gaps = 16/287 (5%)

Query: 282 RDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKL 341
           R    P+++E+   +  + +A G    V +T+QGQ+++ G  + G+LGHG   D   PK+
Sbjct: 202 RPIFRPRLVEALKGVPCKQVAVGLNFTVFLTRQGQLYTCGTNTHGQLGHGDTQDRPTPKI 261

Query: 342 IDALNG-SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV-SGQ 399
           I+ L G  ++  +A G  +  AVT +G +Y++G G  NL  LG   +   + PR + + +
Sbjct: 262 IELLEGVGSVVQIAAGPSYVLAVTDNGVVYSFGSG-SNL-CLGHGEQHDEFRPRAIQTFR 319

Query: 400 MEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM 459
            + + +  +  G  H  A+ S+G ++++G G  GALGHGD    ++P  V  LK    V 
Sbjct: 320 RKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDEIDKTLPALVNCLKSHLAVQ 379

Query: 460 ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW-GDGAEGQLGHGDAEPRVVPLCVKVSDD 518
                  T  +V+  G   G         F W G G+ G    G ++  + P  +     
Sbjct: 380 VCARKRKTFVLVD-GGSVYG---------FGWMGFGSLGFPDRGLSDKVMRPRVLDSLRA 429

Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRI 564
               +++ G   T+ +T  GQ+F  G  +  QLG     G   PT I
Sbjct: 430 RHVSQISTGLYHTVVVTNQGQMFGFGDNERAQLGHDTLRGCLQPTEI 476



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 99/212 (46%), Gaps = 16/212 (7%)

Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-PREVETLKELKTVMASCGVWHTAAIVE 472
           H A +  +G++FT GD +    GH D +     PR VE LK +     + G+  T  +  
Sbjct: 174 HAAFVLQSGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALKGVPCKQVAVGLNFTVFLTR 233

Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI-SFCKVACGHSIT 531
                         +L+T G    GQLGHGD + R  P  +++ + + S  ++A G S  
Sbjct: 234 ------------QGQLYTCGTNTHGQLGHGDTQDRPTPKIIELLEGVGSVVQIAAGPSYV 281

Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHR--YIEDIACGSYHIAVVSSK 589
           +A+T  G V+S GS     LG      +F  R     + +  ++  ++ G  H   + S 
Sbjct: 282 LAVTDNGVVYSFGSGSNLCLGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVALDSS 341

Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALR 621
             VY+WGKG  G LGHGD  +K  P LV  L+
Sbjct: 342 GFVYSWGKGYCGALGHGDEIDKTLPALVNCLK 373



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 106/233 (45%), Gaps = 21/233 (9%)

Query: 275 EISSADRRDALLPKVLESTV-VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
           ++   D +D   PK++E    V     IA G  + + VT  G ++S+G GS   LGHG +
Sbjct: 247 QLGHGDTQDRPTPKIIELLEGVGSVVQIAAGPSYVLAVTDNGVVYSFGSGSNLCLGHGEQ 306

Query: 334 ADVSYPKLIDALNGSNIHM--VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHW 391
            D   P+ I      +IH+  V+ G+ H  A+  SG +Y+WG G    G LG   EI   
Sbjct: 307 HDEFRPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGY--CGALGHGDEIDKT 364

Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS---STSVPRE 448
           +P  V+     L +  +C     T  +   G ++ FG   FG+LG  DR        PR 
Sbjct: 365 LPALVNCLKSHLAV-QVCARKRKTFVLVDGGSVYGFGWMGFGSLGFPDRGLSDKVMRPRV 423

Query: 449 VETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGH 501
           +++L+       S G++HT  +             +  ++F +GD    QLGH
Sbjct: 424 LDSLRARHVSQISTGLYHTVVVT------------NQGQMFGFGDNERAQLGH 464



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 99/221 (44%), Gaps = 16/221 (7%)

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
           G +HT  I  +  +++ G    G LGHG  ++  V         L  V+      + AA 
Sbjct: 119 GRYHTLLIRDS-SVYSCGSSLCGVLGHGAETTQCVAFTRIRFPSLAYVIQVSASHNHAAF 177

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA-EPRVVPLCVKVSDDISFCKVACGHS 529
           V           L S ++FT GD +    GH D   P   P  V+    +   +VA G +
Sbjct: 178 V-----------LQSGEVFTCGDNSSFCCGHNDTNRPIFRPRLVEALKGVPCKQVAVGLN 226

Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKFPTR--IEGNIKHRYIEDIACGSYHIAVVS 587
            T+ LT  GQ+++ G+  +GQLG  G T   PT   IE       +  IA G  ++  V+
Sbjct: 227 FTVFLTRQGQLYTCGTNTHGQLGH-GDTQDRPTPKIIELLEGVGSVVQIAAGPSYVLAVT 285

Query: 588 SKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSV 628
               VY++G G+N  LGHG+  ++  P  ++  R K +  V
Sbjct: 286 DNGVVYSFGSGSNLCLGHGEQHDEFRPRAIQTFRRKDIHVV 326



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 6/178 (3%)

Query: 276 ISSADRRDALLPKVLESTVVLDAQ--SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
           +   ++ D   P+ +++    D     ++ G +HAV +   G ++SWG+G  G LGHG E
Sbjct: 301 LGHGEQHDEFRPRAIQTFRRKDIHVVHVSAGDEHAVALDSSGFVYSWGKGYCGALGHGDE 360

Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE-ISHWI 392
            D + P L++ L  S++ +  C       V + G    +G G    G LG     +S  +
Sbjct: 361 IDKTLPALVNCLK-SHLAVQVCARKRKTFVLVDGG-SVYGFGWMGFGSLGFPDRGLSDKV 418

Query: 393 PR-KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV 449
            R +V   +    +S I  G +HT  +T+ G++F FGD     LGH        P E+
Sbjct: 419 MRPRVLDSLRARHVSQISTGLYHTVVVTNQGQMFGFGDNERAQLGHDTLRGCLQPTEI 476


>gi|221113828|ref|XP_002154529.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
           [Hydra magnipapillata]
          Length = 364

 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 110/215 (51%), Gaps = 17/215 (7%)

Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAI 470
           GP H  A+T +G+L+++G G +G LGH   +S    + V    + K +  +CG +H+ A+
Sbjct: 84  GP-HVLAVTDSGELYSWGHGGYGQLGH---TSEEKSKPVLVYMQKKVIQVACGSYHSIAL 139

Query: 471 VEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSI 530
            E              +++ WG    GQLG G +  +  P  V +        V+CG S 
Sbjct: 140 TE------------DGEVYAWGSNNCGQLGLGISNNQATPKRVSLIPSKKIVSVSCGQSF 187

Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
           T+ LT  G+++S G    GQLG   +T +  P R+ G++  ++IE I CG  H+ V++  
Sbjct: 188 TVMLTTDGELYSWGYNGNGQLGIENNTNQLQPVRVTGSLFGKFIEKIVCGMAHVLVLTDI 247

Query: 590 SEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ 624
            E+Y+WG  + GQLG G   N   PTL+    D +
Sbjct: 248 GELYSWGANSYGQLGLGTTHNTSVPTLINTTTDDR 282



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 123/226 (54%), Gaps = 18/226 (7%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
           G+++ WG G G G LG        +S ++   +L  + +  +      +ACGS H++ +T
Sbjct: 94  GELYSWGHG-GYGQLGH-------TSEEKSKPVLVYMQKKVI-----QVACGSYHSIALT 140

Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
           + G++++WG  + G+LG G+  + + PK +  +    I  V+CG+  T  +T  G+LY+W
Sbjct: 141 EDGEVYAWGSNNCGQLGLGISNNQATPKRVSLIPSKKIVSVSCGQSFTVMLTTDGELYSW 200

Query: 373 G-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           G +G   LG+    +++    P +V+G + G  I  I CG  H   +T  G+L+++G  +
Sbjct: 201 GYNGNGQLGIENNTNQLQ---PVRVTGSLFGKFIEKIVCGMAHVLVLTDIGELYSWGANS 257

Query: 432 FGALGHGDRSSTSVPREVETLKELK-TVMASCGVWHTAAIVEVAGK 476
           +G LG G   +TSVP  + T  + + + +A+    H +A V ++GK
Sbjct: 258 YGQLGLGTTHNTSVPTLINTTTDDRWSDIAAHHYNHISAGVTISGK 303



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 138/296 (46%), Gaps = 32/296 (10%)

Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACG-SKHAVLV 311
           GDV+  G   GNG LG           D    L PK++E     D   +A G   H + V
Sbjct: 41  GDVYALGFN-GNGCLG---------VGDGSSTLEPKIIEQLCQKDIVQLAYGMGPHVLAV 90

Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
           T  G+++SWG G  G+LGH  E + S P L+       +  VACG +H+ A+T  G++Y 
Sbjct: 91  TDSGELYSWGHGGYGQLGHTSE-EKSKPVLVYMQ--KKVIQVACGSYHSIALTEDGEVYA 147

Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
           WG   +N G LG     +   P++VS  +   +I S+ CG   T  +T+ G+L+++G   
Sbjct: 148 WGS--NNCGQLGLGISNNQATPKRVS-LIPSKKIVSVSCGQSFTVMLTTDGELYSWGYNG 204

Query: 432 FGALGHGDRSSTSVPREVETLKELKTV-MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
            G LG  + ++   P  V      K +    CG+ H   + ++             +L++
Sbjct: 205 NGQLGIENNTNQLQPVRVTGSLFGKFIEKIVCGMAHVLVLTDIG------------ELYS 252

Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH--SITIALTATGQVFSMG 544
           WG  + GQLG G      VP  +  + D  +  +A  H   I+  +T +G+++  G
Sbjct: 253 WGANSYGQLGLGTTHNTSVPTLINTTTDDRWSDIAAHHYNHISAGVTISGKIYMWG 308



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 109/212 (51%), Gaps = 17/212 (8%)

Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW-HTAAIVEVAGKTSGS 480
           G ++  G    G LG GD SST  P+ +E L +   V  + G+  H  A+ +        
Sbjct: 41  GDVYALGFNGNGCLGVGDGSSTLEPKIIEQLCQKDIVQLAYGMGPHVLAVTD-------- 92

Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQV 540
               S +L++WG G  GQLGH  +E +  P+ V +   +   +VACG   +IALT  G+V
Sbjct: 93  ----SGELYSWGHGGYGQLGH-TSEEKSKPVLVYMQKKV--IQVACGSYHSIALTEDGEV 145

Query: 541 FSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGAN 600
           ++ GS + GQLG   S  +   +    I  + I  ++CG     ++++  E+Y+WG   N
Sbjct: 146 YAWGSNNCGQLGLGISNNQATPKRVSLIPSKKIVSVSCGQSFTVMLTTDGELYSWGYNGN 205

Query: 601 GQLGHGDNENKQTPTLVE-ALRDKQVKSVVCG 631
           GQLG  +N N+  P  V  +L  K ++ +VCG
Sbjct: 206 GQLGIENNTNQLQPVRVTGSLFGKFIEKIVCG 237



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 80/161 (49%), Gaps = 12/161 (7%)

Query: 483 LSSKKLFTWGDGAEGQLGHGDA----EPRVVP-LCVKVSDDISFCKVACGHSITIALTAT 537
           L++  ++  G    G LG GD     EP+++  LC K   DI       G  + +A+T +
Sbjct: 38  LTNGDVYALGFNGNGCLGVGDGSSTLEPKIIEQLCQK---DIVQLAYGMGPHV-LAVTDS 93

Query: 538 GQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
           G+++S G   YGQLG        P  +      + +  +ACGSYH   ++   EVY WG 
Sbjct: 94  GELYSWGHGGYGQLGHTSEEKSKPVLV---YMQKKVIQVACGSYHSIALTEDGEVYAWGS 150

Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
              GQLG G + N+ TP  V  +  K++ SV CG +FT  +
Sbjct: 151 NNCGQLGLGISNNQATPKRVSLIPSKKIVSVSCGQSFTVML 191


>gi|349605413|gb|AEQ00660.1| putative E3 ubiquitin-protein ligase HERC4-like protein, partial
           [Equus caballus]
          Length = 911

 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 110/215 (51%), Gaps = 15/215 (6%)

Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFH 359
           +ACG  H++ ++K  ++F WG+   G+LG G++    + P+LI +L G     VA G  H
Sbjct: 3   VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAH 62

Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
           +  +TLSG ++ WG   +  G LG   E   + P  +   +   +I  ICCG  HTAA+T
Sbjct: 63  SFVLTLSGAIFGWGR--NKFGQLGLNDENDRYFPNLLKS-LRTQKIVYICCGEDHTAALT 119

Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
             G +FTFG G +G LGH   S    PR+V  L        +CG  HT+A V        
Sbjct: 120 KEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVP------- 172

Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
               SS +++++G G  GQLG G    R  P  VK
Sbjct: 173 ----SSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 203



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 14/213 (6%)

Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWH 466
           + CG +H+ A++ A ++F +G   +G LG G D    + P+ +++L  +  +  + G  H
Sbjct: 3   VACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGAH 62

Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
           +  +       SG+       +F WG    GQLG  D   R  P  +K         + C
Sbjct: 63  SFVLT-----LSGA-------IFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICC 110

Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHI-AV 585
           G   T ALT  G VF+ G+  YGQLG   ++ +   R    +    +  IACG  H  A 
Sbjct: 111 GEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTSAF 170

Query: 586 VSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
           V S   +Y++G G NGQLG G   N+++P  V+
Sbjct: 171 VPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 203



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 102/198 (51%), Gaps = 13/198 (6%)

Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
           +VF WG+    G LG  +        D +    P++++S + +    +A G  H+ ++T 
Sbjct: 18  EVFCWGQN-KYGQLGLGI--------DYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTL 68

Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
            G IF WG    G+LG   E D  +P L+ +L    I  + CGE HT A+T  G ++T+G
Sbjct: 69  SGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFG 128

Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
            G    G LG  S      PRKV  ++ G  ++ I CG  HT+A + S+G++++FG G  
Sbjct: 129 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 185

Query: 433 GALGHGDRSSTSVPREVE 450
           G LG G  S+   P  V+
Sbjct: 186 GQLGTGSTSNRKSPFTVK 203



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 86/183 (46%), Gaps = 13/183 (7%)

Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVS 516
           V  +CG +H+ A+ +            + ++F WG    GQLG G D + +  P  +K  
Sbjct: 1   VQVACGYYHSLALSK------------ASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSL 48

Query: 517 DDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDI 576
             I F +VA G + +  LT +G +F  G   +GQLG      ++   +  +++ + I  I
Sbjct: 49  LGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYI 108

Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTA 636
            CG  H A ++ +  V+T+G G  GQLGH    ++  P  V  L    V  + CG   T+
Sbjct: 109 CCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIACGRQHTS 168

Query: 637 AIC 639
           A  
Sbjct: 169 AFV 171



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 3/125 (2%)

Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACG 579
            +VACG+  ++AL+   +VF  G   YGQLG      K   P  I+  +   +++ +A G
Sbjct: 1   VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQ-VAAG 59

Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
             H  V++    ++ WG+   GQLG  D  ++  P L+++LR +++  + CG + TAA+ 
Sbjct: 60  GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALT 119

Query: 640 LHKGV 644
              GV
Sbjct: 120 KEGGV 124


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.314    0.130    0.381 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,823,897,676
Number of Sequences: 23463169
Number of extensions: 588989525
Number of successful extensions: 1555591
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4879
Number of HSP's successfully gapped in prelim test: 4712
Number of HSP's that attempted gapping in prelim test: 1425254
Number of HSP's gapped (non-prelim): 45604
length of query: 902
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 750
effective length of database: 8,792,793,679
effective search space: 6594595259250
effective search space used: 6594595259250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 82 (36.2 bits)