BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002602
(902 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 189 bits (480), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 123/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)
Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
VF+WG + L G + G +I +P E+ L+ +A GSK VT +
Sbjct: 2962 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 315 GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
G+++S GE + G+LG G+ + V P+ I AL+ + VA G H A+T+ G +++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
WG+G + G LG S ++ PR + ++ +I I CG H+AA+TS+G+L+T+G G
Sbjct: 3072 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
+G LGHGD ++ P+ V+ L + + +CG + + + L+ + L F+
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3177
Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
WGDG G+LG G +E +P ++ + C++ CG ++ALT +G V++ G DY +
Sbjct: 3178 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3237
Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
LG + P +EG ++ + I +A G+ H V+ +VY WG +GQ G+G
Sbjct: 3238 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3296
Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
+ PTLV+ L +++ V CGS+ + A
Sbjct: 3297 VNRKPTLVQGLEGQKITRVACGSSHSVA 3324
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)
Query: 251 GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
G G ++ WG G LGG + G ++ +P E+ L + G +
Sbjct: 3952 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 4001
Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
VT G++++ G G+GG+LG G VS P L++++ I VA G H A++ G+
Sbjct: 4002 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4061
Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
+Y+WG+ G LG + PR + + G+++ + G H+A +T+AG L+T+G
Sbjct: 4062 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4118
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
G +G LGH D P+ VE L+ + + +CG +G +
Sbjct: 4119 KGRYGRLGHSDSEDQLKPKLVEALQGHRVIDIACG----------SGDAQTLCLTDDDTV 4168
Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
++WGDG G+LG G ++ VP+ + + KV CG ++ALT +G V++ G DY
Sbjct: 4169 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4228
Query: 549 GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
+LG GS + P +++G ++ + + IA GS H + EVYTWG GQLG G
Sbjct: 4229 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4286
Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
Q P LV AL+ K+V V CGS T A
Sbjct: 4287 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4317
Score = 157 bits (398), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 175/355 (49%), Gaps = 37/355 (10%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P E L +AC K +++++ G++++ +D+ P+L+ L
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYT----------QAYNSDMLAPQLVQGLA 492
Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
NI +A H A+ +G++Y+WG G + G LG + P+ +S G+
Sbjct: 493 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 550
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
G + I CG ++AAIT+ G+L+T+G G +G LGHG ++P V LK LK + +
Sbjct: 551 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610
Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
CG T A+ E NG ++++WGDG G+LG G ++ P ++ D+
Sbjct: 611 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 658
Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
KV CG +IALT GQV+S G D +LG ++P +EG ++ + + D+A
Sbjct: 659 DVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 717
Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
GS H ++ SEV++W G+N Q H D K PT + L K + + CG
Sbjct: 718 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPTALPGLDSKHIVGIACG 770
Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 169/340 (49%), Gaps = 36/340 (10%)
Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
T + ++F WG +LG + + P + L+ N+ VA G AVT+ G +Y+
Sbjct: 2957 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYS 3016
Query: 372 WGDGIHNLGLLG----------QVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
G+ + LG Q++ +S ++ +KV+ + G H A+T
Sbjct: 3017 CGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVA----------VHSGGRHATALTVD 3066
Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
GK+F++G+G G LGH R + PR +E LK + +CG H+AA+
Sbjct: 3067 GKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT---------- 3116
Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQ 539
SS +L+TWG G G+LGHGD ++ P VKV +VACG + T+ALT G
Sbjct: 3117 --SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGL 3174
Query: 540 VFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
VFS G D+G+LG GS G P IE + + + I CG+ ++ V+TWGKG
Sbjct: 3175 VFSWGDGDFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKG 3233
Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+LGHG + + + P +VE LR K++ V G+ A+
Sbjct: 3234 DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3273
Score = 137 bits (345), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 163/352 (46%), Gaps = 30/352 (8%)
Query: 188 VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
+ + T K Y+ E+ + L S G R TA S + AV S + +
Sbjct: 3005 LFAVTVEGKVYSCGEATNGRLGLGMSSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3063
Query: 248 DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
DG VF WGEG +G LG R + P+++E+ + IACGS H
Sbjct: 3064 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3111
Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
+ +T G++++WG G G+LGHG PK++ L G + VACG + T A+T
Sbjct: 3112 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3171
Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
G +++WGDG + G LG+ IP+ + ++ G + I CG + A+T +G ++
Sbjct: 3172 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3228
Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
T+G G + LGHG P+ VE L+ K V + G H A+ + S
Sbjct: 3229 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3276
Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
+++ WGD GQ G+G P V+ + +VACG S ++A T
Sbjct: 3277 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3328
Score = 136 bits (343), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 163/329 (49%), Gaps = 34/329 (10%)
Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
++ WG +G A+V P + L + VAC E ++ +G +YT
Sbjct: 425 EVIGWG-----LIGWKYYANVIGPIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQA-- 477
Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
+N +L P+ V G + I I H A+ + G+++++G G G
Sbjct: 478 -YNSDMLA---------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526
Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
LGHGD +VP L+E K + A G +V +A ++ S ++++ +L+TWG
Sbjct: 527 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
G G+LGHG +E +P+ V + VACG + T+A+T GQV+S G DYG+
Sbjct: 578 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 637
Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
LG GS G K P IE ++ + + CGS ++ +VY+WGKG N +LGHG E
Sbjct: 638 LGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 696
Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+ + P L+E L+ K+V V GS A+
Sbjct: 697 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 725
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)
Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
+++ S G + G+V+ WG G G L G + V + A K VV
Sbjct: 499 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 555
Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
IACGS ++ +T +G++++WG G+ G+LGHG D + P L+ L G + VAC
Sbjct: 556 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 612
Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
G+ T AVT +G +++WGDG + G LG+ P+ + +++ L + + CG
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVIKVRCGSQF 669
Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
+ A+T G+++++G G LGHG P+ +E L+ K + + G H A+ E
Sbjct: 670 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 727
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 132/279 (47%), Gaps = 23/279 (8%)
Query: 366 SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
SG +Y WG HN G LG + +P + L+ + G A+T+ GKL
Sbjct: 3953 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4008
Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
+ G G G LG G S S P +E+++ +K V + G H A+
Sbjct: 4009 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4057
Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
S ++++WG+ +G+LGHG+ P P ++ I VA G + + +TA G +++
Sbjct: 4058 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4116
Query: 543 MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
G YG+LG S + P +E HR I DIACGS ++ V++WG G
Sbjct: 4117 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI-DIACGSGDAQTLCLTDDDTVWSWGDGD 4175
Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
G+LG G ++ + P +++L V V CGS F+ A+
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4214
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 108/230 (46%), Gaps = 19/230 (8%)
Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA 474
TA I + K+F +G LG S VP ETL L +V+VA
Sbjct: 2955 TATIRT--KVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVA 2999
Query: 475 GKTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSI 530
G + ++ + K+++ G+ G+LG G + V +P + KVA G
Sbjct: 3000 GGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRH 3059
Query: 531 TIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
ALT G+VFS G D G+LG R+ +K + I DIACGS H A ++S
Sbjct: 3060 ATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSG 3119
Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
E+YTWG G G+LGHGDN + P +V+ L +V V CGS + L
Sbjct: 3120 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3169
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)
Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
G V+ WG+G L G +G + PK++E LD + CGS+ ++ +T
Sbjct: 625 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVIKVRCGSQFSIALT 674
Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
K GQ++SWG+G +LGHG E V YPKL++ L G + VA G H A+T ++++W
Sbjct: 675 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 734
Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
G D + L ++ P + G ++ I I CGP + A +S
Sbjct: 735 GSNDQCQHFDTL----RVTKPEPTALPG-LDSKHIVGIACGPAQSFAWSS 779
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)
Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
+G ++ +G G LG + + VP E L L+ V + G+ +
Sbjct: 3953 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 4000
Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
+ KL+ G GA G+LG G E P ++ + KVA G +AL++ G
Sbjct: 4001 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060
Query: 539 QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
+V+S G A+ G+LG + R+ +++ + D+A G H A V++ ++YTWGKG
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4120
Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
G+LGH D+E++ P LVEAL+ +V + CGS +CL
Sbjct: 4121 RYGRLGHSDSEDQLKPKLVEALQGHRVIDIACGSGDAQTLCL 4162
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)
Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
VF+WG + L G + G +I +P E+ L+ +A GSK VT +
Sbjct: 2961 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3010
Query: 315 GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
G++++ GE + G+LG G+ + V P+ I AL+ + VA G H A+T+ G +++
Sbjct: 3011 GKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3070
Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
WG+G + G LG S ++ PR + ++ +I I CG H+AA+TS+G+L+T+G G
Sbjct: 3071 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3127
Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
+G LGHGD ++ P+ V+ L + + +CG + + + L+ + L F+
Sbjct: 3128 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3176
Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
WGDG G+LG G +E +P ++ + C++ CG ++ALT +G V++ G DY +
Sbjct: 3177 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3236
Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
LG + P +EG ++ + I +A G+ H V+ +VY WG +GQ G+G
Sbjct: 3237 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3295
Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
+ PTLV+ L +++ V CGS+ + A
Sbjct: 3296 VNRKPTLVQGLEGQKITRVACGSSHSVA 3323
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 193/391 (49%), Gaps = 29/391 (7%)
Query: 251 GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
G G ++ WG G LGG + G ++ +P E+ L + G +
Sbjct: 3950 GSGTIYGWGHN-HRGQLGG-IEGAKVK--------VPTPCEALATLRPVQLIGGEQTLFA 3999
Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
VT G++++ G G+GG+LG G VS P L++++ I VA G H A++ G+
Sbjct: 4000 VTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGE 4059
Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
+Y+WG+ G LG + PR + + G+++ + G H+A +T+AG L+T+G
Sbjct: 4060 VYSWGEA--EDGKLGHGNRSPCDRPRVIE-SLRGIEVVDVAAGGAHSACVTAAGDLYTWG 4116
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
G +G LGH D P+ VE L+ + V +CG +G +
Sbjct: 4117 KGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG----------SGDAQTLCLTDDDTV 4166
Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
++WGDG G+LG G ++ VP+ + + KV CG ++ALT +G V++ G DY
Sbjct: 4167 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 4226
Query: 549 GQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
+LG GS + P +++G ++ + + IA GS H + EVYTWG GQLG G
Sbjct: 4227 HRLGH-GSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4284
Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
Q P LV AL+ K+V V CGS T A
Sbjct: 4285 TTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4315
Score = 157 bits (396), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 18/331 (5%)
Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
T + ++F WG +LG + + P + L+ N+ VA G AVT+ G +Y
Sbjct: 2956 TIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3015
Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL-QISSICCGPWHTAAITSAGKLFTFGDG 430
G+ + LG +S + IPR+++ + + ++ G H A+T GK+F++G+G
Sbjct: 3016 CGEATNGRLGLG-ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEG 3074
Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
G LGH R + PR +E LK + +CG H+AA+ SS +L+T
Sbjct: 3075 DDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALT------------SSGELYT 3122
Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADY 548
WG G G+LGHGD ++ P VKV +VACG + T+ALT G VFS G D+
Sbjct: 3123 WGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDF 3182
Query: 549 GQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
G+LG GS G P IE + + + I CG+ ++ V+TWGKG +LGHG
Sbjct: 3183 GKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGS 3241
Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+ + + P +VE LR K++ V G+ A+
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGALHCLAV 3272
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 173/355 (48%), Gaps = 37/355 (10%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
P E L IAC K +++++ G++++ +D P+L+ L
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYT----------QAYNSDTLAPQLVQGLA 491
Query: 347 GSNIHMVACGE--FHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS---GQME 401
NI +A H A+ +G++Y+WG G + G LG + P+ +S G+
Sbjct: 492 SRNIVKIAAHSDGHHYLALAATGEVYSWGCG--DGGRLGHGDTVPLEEPKVISAFSGKQA 549
Query: 402 GLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
G + I CG ++AAIT+ G+L+T+G G +G LGHG ++P V LK LK + +
Sbjct: 550 GKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609
Query: 462 CGV--WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI 519
CG T A+ E NG ++++WGDG G+LG G ++ P ++ D+
Sbjct: 610 CGSGDAQTLAVTE--------NG----QVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDL 657
Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIAC 578
KV CG +IALT GQV+S G D +LG ++P +EG ++ + + D+A
Sbjct: 658 DVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEG-LQGKKVIDVAA 716
Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN--ENKQTPTLVEALRDKQVKSVVCG 631
GS H ++ SEV++W G+N Q H D K P + L K + + CG
Sbjct: 717 GSTHCLALTEDSEVHSW--GSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACG 769
Score = 143 bits (361), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/329 (31%), Positives = 160/329 (48%), Gaps = 25/329 (7%)
Query: 272 NGVEISSADRRDALLPKVLESTVVLDAQSIACGSK--HAVLVTKQGQIFSWGEGSGGKLG 329
NG + A D L P++++ + IA S H + + G+++SWG G GG+LG
Sbjct: 469 NGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLG 528
Query: 330 HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385
HG + PK+I A +G ++ +ACG ++ A+T G+LYTWG G N G LG
Sbjct: 529 HGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRG--NYGRLGHG 586
Query: 386 SEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSST 443
S IP V+G ++GL++ + CG T A+T G+++++GDG +G LG G
Sbjct: 587 SSEDEAIPMLVAG-LKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 645
Query: 444 SVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD 503
P+ +E L++L V CG + A+ + ++++WG G +LGHG
Sbjct: 646 KTPKLIEKLQDLDVVKVRCGSQFSIALTK------------DGQVYSWGKGDNQRLGHGT 693
Query: 504 AEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ-LGSPGSTGKFPT 562
E P ++ VA G + +ALT +V S GS D Q + T P
Sbjct: 694 EEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPA 753
Query: 563 RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
+ G + ++I IACG SS SE
Sbjct: 754 ALPG-LDTKHIVGIACGPAQSFAWSSCSE 781
Score = 136 bits (343), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/352 (29%), Positives = 162/352 (46%), Gaps = 30/352 (8%)
Query: 188 VLSFTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHE 247
+ + T K Y E+ + L S G R TA S + AV S + +
Sbjct: 3004 LFAVTVEGKVYACGEATNGRLGLGISSGTVPI-PRQITALSSYVVKKVAVHSGGRHATAL 3062
Query: 248 DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
DG VF WGEG +G LG R + P+++E+ + IACGS H
Sbjct: 3063 TVDG--KVFSWGEG-DDGKLG---------HFSRMNCDKPRLIEALKTKRIRDIACGSSH 3110
Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTL 365
+ +T G++++WG G G+LGHG PK++ L G + VACG + T A+T
Sbjct: 3111 SAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 3170
Query: 366 SGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
G +++WGDG + G LG+ IP+ + ++ G + I CG + A+T +G ++
Sbjct: 3171 EGLVFSWGDG--DFGKLGRGGSEGCNIPQNIE-RLNGQGVCQIECGAQFSLALTKSGVVW 3227
Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
T+G G + LGHG P+ VE L+ K V + G H A+ + S
Sbjct: 3228 TWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTD------------S 3275
Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
+++ WGD GQ G+G P V+ + +VACG S ++A T
Sbjct: 3276 GQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTV 3327
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 160/329 (48%), Gaps = 34/329 (10%)
Query: 316 QIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDG 375
++ WG +G A+V P + L + +AC E ++ +G +YT
Sbjct: 424 EVIGWG-----LIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYN 478
Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP--WHTAAITSAGKLFTFGDGTFG 433
L P+ V G + I I H A+ + G+++++G G G
Sbjct: 479 SDTLA------------PQLVQG-LASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 525
Query: 434 ALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWG 492
LGHGD +VP L+E K + A G +V +A ++ S ++++ +L+TWG
Sbjct: 526 RLGHGD----TVP-----LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576
Query: 493 DGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACG--HSITIALTATGQVFSMGSADYGQ 550
G G+LGHG +E +P+ V + VACG + T+A+T GQV+S G DYG+
Sbjct: 577 RGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGK 636
Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
LG GS G K P IE ++ + + CGS ++ +VY+WGKG N +LGHG E
Sbjct: 637 LGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEE 695
Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+ + P L+E L+ K+V V GS A+
Sbjct: 696 HVRYPKLLEGLQGKKVIDVAAGSTHCLAL 724
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 11/238 (4%)
Query: 237 VSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVL 296
+++ S G + G+V+ WG G G L G + V + A K VV
Sbjct: 498 IAAHSDGHHYLALAATGEVYSWGCGDGGRL--GHGDTVPLEEPKVISAFSGKQAGKHVV- 554
Query: 297 DAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC- 355
IACGS ++ +T +G++++WG G+ G+LGHG D + P L+ L G + VAC
Sbjct: 555 ---HIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVACG 611
Query: 356 -GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWH 414
G+ T AVT +G +++WGDG + G LG+ P+ + +++ L + + CG
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG--DYGKLGRGGSDGCKTPKLIE-KLQDLDVVKVRCGSQF 668
Query: 415 TAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
+ A+T G+++++G G LGHG P+ +E L+ K + + G H A+ E
Sbjct: 669 SIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTE 726
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 106/229 (46%), Gaps = 17/229 (7%)
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
+A T K+F +G LG S VP ETL L +V+VAG
Sbjct: 2953 SAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALN-------------VVQVAG 2999
Query: 476 KTSGSNGLSSK-KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVAC--GHSIT 531
+ ++ + K++ G+ G+LG G + V +P + KVA G
Sbjct: 3000 GSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHA 3059
Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
ALT G+VFS G D G+LG R+ +K + I DIACGS H A ++S E
Sbjct: 3060 TALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGE 3119
Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
+YTWG G G+LGHGDN + P +V+ L +V V CGS + L
Sbjct: 3120 LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLAL 3168
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 132/279 (47%), Gaps = 23/279 (8%)
Query: 366 SGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
SG +Y WG HN G LG + +P + L+ + G A+T+ GKL
Sbjct: 3951 SGTIYGWG---HNHRGQLGGIEGAKVKVPTPCEA-LATLRPVQLIGGEQTLFAVTADGKL 4006
Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKE--LKTVMASCGVWHTAAIVEVAGKTSGSNG 482
+ G G G LG G S S P +E+++ +K V + G H A+
Sbjct: 4007 YATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALS----------- 4055
Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
S ++++WG+ +G+LGHG+ P P ++ I VA G + + +TA G +++
Sbjct: 4056 -SEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYT 4114
Query: 543 MGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGS--YHIAVVSSKSEVYTWGKGA 599
G YG+LG S + P +E HR + DIACGS ++ V++WG G
Sbjct: 4115 WGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV-DIACGSGDAQTLCLTDDDTVWSWGDGD 4173
Query: 600 NGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
G+LG G ++ + P +++L V V CGS F+ A+
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4212
Score = 89.0 bits (219), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 17/170 (10%)
Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
G V+ WG+G L G +G + PK++E LD + CGS+ ++ +T
Sbjct: 624 GQVWSWGDGDYGKLGRGGSDGCKT----------PKLIEKLQDLDVVKVRCGSQFSIALT 673
Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
K GQ++SWG+G +LGHG E V YPKL++ L G + VA G H A+T ++++W
Sbjct: 674 KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSW 733
Query: 373 G--DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
G D + L ++ P + G ++ I I CGP + A +S
Sbjct: 734 GSNDQCQHFDTL----RVTKPEPAALPG-LDTKHIVGIACGPAQSFAWSS 778
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 110/222 (49%), Gaps = 14/222 (6%)
Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
+G ++ +G G LG + + VP E L L+ V + G+ +
Sbjct: 3951 SGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQL------------IGGEQTLF 3998
Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
+ KL+ G GA G+LG G E P ++ + KVA G +AL++ G
Sbjct: 3999 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058
Query: 539 QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
+V+S G A+ G+LG + R+ +++ + D+A G H A V++ ++YTWGKG
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 4118
Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
G+LGH D+E++ P LVEAL+ +V + CGS +CL
Sbjct: 4119 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL 4160
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 183 bits (464), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 111/348 (31%), Positives = 184/348 (52%), Gaps = 18/348 (5%)
Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQG-QIFSWGEGSGGKLGHGVE 333
++ D D P L + S+ CG+ H V ++ G +++SWG G G+LGHG
Sbjct: 46 QLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNS 105
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
+D+ P I AL+G I +ACG+ H AVT+ G++ +WG + G LG +P
Sbjct: 106 SDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGR--NQNGQLGLGDTEDSLVP 163
Query: 394 RKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLK 453
+K+ EG++I + G HTAA+T G L+ +G G +G LG GDR+ VP V +
Sbjct: 164 QKIQ-AFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTG 222
Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
K M +CG HT ++ S L+T+G GQLGHGD E ++P +
Sbjct: 223 GEKMSMVACGWRHTISVS------------YSGALYTYGWSKYGQLGHGDLEDHLIPHKL 270
Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRY 572
+ + +++ G T+ALT+ G+++ G +GQ+G + + P ++ +
Sbjct: 271 EALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKV 330
Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
++ ++CG H V+ ++ V+ WG+G NGQLG G++ ++ P ++EAL
Sbjct: 331 VQ-VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEAL 377
Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/340 (32%), Positives = 172/340 (50%), Gaps = 18/340 (5%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
I+ G+ H+V + + SWG G G+LGHG D P + AL+G I V CG HT
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79
Query: 361 CAVTLSG-DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
A + SG ++Y+WG G + G LG + + P + + G++I I CG H A+T
Sbjct: 80 VAYSQSGMEVYSWGWG--DFGRLGHGNSSDLFTPLPIK-ALHGIRIKQIACGDSHCLAVT 136
Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
G++ ++G G LG GD + VP++++ + ++ M + G HTAA+ E
Sbjct: 137 MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE------- 189
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
L+ WG G G LG GD R+VP V + VACG TI+++ +G
Sbjct: 190 -----DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGA 244
Query: 540 VFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
+++ G + YGQLG P ++E + + +I I+ G H ++S ++Y WG
Sbjct: 245 LYTYGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGGWRHTMALTSDGKLYGWGWN 303
Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
GQ+G G+N ++ +P V D++V V CG T A+
Sbjct: 304 KFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 343
Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 96/187 (51%), Gaps = 19/187 (10%)
Query: 456 KTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKV 515
K ++ S G H+ A+ LS + +WG G +GQLGHGDAE R P +
Sbjct: 16 KVLIISAGASHSVAL------------LSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSA 63
Query: 516 SDDISFCKVACGHSITIALTATG-QVFSMGSADYGQLGSPGSTGKF---PTRIEGNIKHR 571
D V CG T+A + +G +V+S G D+G+LG S+ F P + I+
Sbjct: 64 LDGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR-- 121
Query: 572 YIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
I+ IACG H V+ + EV +WG+ NGQLG GD E+ P ++A ++K V G
Sbjct: 122 -IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAG 180
Query: 632 SNFTAAI 638
+ TAA+
Sbjct: 181 AEHTAAV 187
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYH 582
++ G S ++AL + V S G + GQLG + + PT++ H+ + + CG+ H
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVS-VTCGADH 78
Query: 583 -IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
+A S EVY+WG G G+LGHG++ + TP ++AL ++K + CG + A+ +
Sbjct: 79 TVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTM 137
Score = 50.1 bits (118), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 34/46 (73%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN 346
++CG +H + VT++ +F+WG G+ G+LG G D ++PK+I+AL+
Sbjct: 333 VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 378
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 182 bits (463), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 125/389 (32%), Positives = 198/389 (50%), Gaps = 34/389 (8%)
Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
DV++WG G +G L A R+ ++P S AQ + CG ++
Sbjct: 3998 DVYLWGAG-RHGQLAEA----------GRNVMVPAAAPS--FSQAQQVICGQNCTFVIQA 4044
Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIH--MVACG-EFHTCAVTLSGDLY 370
G + + GEGS G+LG G D+ +I AL G + + +CG + H+ A+T SG+++
Sbjct: 4045 NGTVLACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVF 4104
Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
+WGDG + G LG + PR++ ++G ++ + CG H+A +TS GKLFTFG+G
Sbjct: 4105 SWGDG--DYGKLGHGNSDRQRRPRQIEA-LQGEEVVQMSCGFKHSAVVTSDGKLFTFGNG 4161
Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
+G LG G+ S+ +P V L+ + +CG+ HT A+ GS ++
Sbjct: 4162 DYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-----SADGS------MVWA 4210
Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
+GDG G+LG G++ + P + V I KVACG ++ALT G V++ G
Sbjct: 4211 FGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRL-- 4268
Query: 551 LGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
+G P + R + + IED+A G+ H ++S +VY WG + GQLG G
Sbjct: 4269 IGLPEGRARNHNRPQQIPVLAGVIIEDVAVGAEHTLALASNGDVYAWGSNSEGQLGLGHT 4328
Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
+ + PTLV L+ K V+ + G +AA
Sbjct: 4329 NHVREPTLVTGLQGKNVRQISAGRCHSAA 4357
Score = 155 bits (391), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 190/388 (48%), Gaps = 32/388 (8%)
Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
+V++WG + L+ G + L PK+ S DAQ+I G +++
Sbjct: 373 EVYVWGSNSSHQLVEGT----------QEKILQPKLAPS--FSDAQTIEAGQYCTFVIST 420
Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG---EFHTCAVTLSGDLY 370
G + + G+GS G+LG G + S K + +I V+ + HT A T G+++
Sbjct: 421 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 480
Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
+WGDG + G LG + + P+ + G ++G + + G H+AA+T G+L+T+G+G
Sbjct: 481 SWGDG--DYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEG 538
Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
FG LGHGD +S ++P V+ + + V SCG HT A+ + + +++
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDISNVGEV--SCGSSHTIALSK-----------DGRTVWS 585
Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
+G G G+LGHGD P ++ + KV G ++ALT+TGQV++ G
Sbjct: 586 FGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG 645
Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
GS +T P IE R + D++ G H +S +EVY WG + GQ G G++
Sbjct: 646 CGSSEATALRPKLIEELAATRIV-DVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTG 704
Query: 611 KQT-PTLVEALRDKQVKSVVCGSNFTAA 637
T P V L ++ + G++ + A
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLA 732
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 159/330 (48%), Gaps = 30/330 (9%)
Query: 317 IFSWGEGSGGKL---GHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
++ WG G G+L G V + P S V CG+ T + +G + G
Sbjct: 3999 VYLWGAGRHGQLAEAGRNVMVPAAAPSF------SQAQQVICGQNCTFVIQANGTVLACG 4052
Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAAITSAGKLFTFGDG 430
+G + G LGQ + + +S ++G Q+ + C H+ A+T +G++F++GDG
Sbjct: 4053 EG--SYGRLGQGNSDDLHVLTVISA-LQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDG 4109
Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
+G LGHG+ PR++E L+ + V SCG H+A + S KLFT
Sbjct: 4110 DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT------------SDGKLFT 4157
Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATG-QVFSMGSADYG 549
+G+G G+LG G+ + +P V + +VACG + T+A++A G V++ G DYG
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYG 4217
Query: 550 QLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN 608
+LG ST K P +I+ + I+ +ACG+ ++ VYT+G+ L G
Sbjct: 4218 KLGLGNSTAKSSPQKID-VLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRA 4276
Query: 609 ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
N P + L ++ V G+ T A+
Sbjct: 4277 RNHNRPQQIPVLAGVIIEDVAVGAEHTLAL 4306
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 139/278 (50%), Gaps = 28/278 (10%)
Query: 368 DLYTWGDGIHNLGLLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
D+Y WG G H GQ++E +P + Q+ CG T I + G +
Sbjct: 3998 DVYLWGAGRH-----GQLAEAGRNVMVPAAAPSFSQAQQV---ICGQNCTFVIQANGTVL 4049
Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLK--ELKTVMASCGV-WHTAAIVEVAGKTSGSNG 482
G+G++G LG G+ V + L+ + ++ SCG H+ A+ E
Sbjct: 4050 ACGEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE---------- 4099
Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFS 542
S ++F+WGDG G+LGHG+++ + P ++ +++CG + +T+ G++F+
Sbjct: 4100 --SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFT 4157
Query: 543 MGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGAN 600
G+ DYG+LG S K P R+ ++ I +ACG H +AV + S V+ +G G
Sbjct: 4158 FGNGDYGRLGLGNTSNKKLPERVTA-LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDY 4216
Query: 601 GQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
G+LG G++ K +P ++ L +K V CG+ F+ A+
Sbjct: 4217 GKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFSVAL 4254
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 40/331 (12%)
Query: 215 GLDDANSRSSTAD-SFRISLSSAVSSSSQGSCHED--FDGLGDVFIWGEG----LGNGLL 267
GL D+N++S+ +F S SSS+GS F G+VF WG+G LG+G
Sbjct: 436 GLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHG-- 493
Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
SS + L+ L+ VV+ ++ G +H+ VT+ G++++WGEG G+
Sbjct: 494 --------NSSTQKYPKLIQGPLQGKVVV---CVSAGYRHSAAVTEDGELYTWGEGDFGR 542
Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
LGHG + P L+ + SN+ V+CG HT A++ G W G + G LG
Sbjct: 543 LGHGDSNSRNIPTLVKDI--SNVGEVSCGSSHTIALSKDGR-TVWSFGGGDNGKLGHGDT 599
Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSV-P 446
+ P KV ++G+ I +C G + A+TS G+++ +G G LG G +T++ P
Sbjct: 600 NRVYKP-KVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLGCGSSEATALRP 656
Query: 447 REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE- 505
+ +E L + V S G H A+ +++ WG+ + GQ G G++
Sbjct: 657 KLIEELAATRIVDVSIGDSHCLALSH------------DNEVYAWGNNSMGQCGQGNSTG 704
Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTA 536
P P V D I+ +++ G S ++A TA
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWTA 735
Score = 100 bits (248), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 23/256 (8%)
Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREV--ETLKELKTVMASCGV 464
+I G + T I++ G + G G++G LG GD ++ S +++ E + +K V +S G
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGS 466
Query: 465 -WHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK--VSDDISF 521
HT A T G ++F+WGDG G+LGHG++ + P ++ + +
Sbjct: 467 DGHTLAFT-----TEG-------EVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVV 514
Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS 580
C V+ G+ + A+T G++++ G D+G+LG S + PT ++ +I + + +++CGS
Sbjct: 515 C-VSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVK-DISN--VGEVSCGS 570
Query: 581 YH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
H IA+ V+++G G NG+LGHGD P ++EAL+ ++ V GS + A+
Sbjct: 571 SHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALT 630
Query: 640 LHKGVSIADHSICSGC 655
V C GC
Sbjct: 631 STGQVYAWGCGACLGC 646
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 289 VLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
VL ++ D +A G++H + + G +++WG S G+LG G V P L+ L G
Sbjct: 4287 VLAGVIIED---VAVGAEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGK 4343
Query: 349 NIHMVACGEFHTCAVT 364
N+ ++ G H+ A T
Sbjct: 4344 NVRQISAGRCHSAAWT 4359
Score = 33.9 bits (76), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 589 KSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
K +VY WG G +GQL N P + Q + V+CG N T I
Sbjct: 3996 KCDVYLWGAGRHGQLAEA-GRNVMVPAAAPSF--SQAQQVICGQNCTFVI 4042
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 176 bits (447), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 189/391 (48%), Gaps = 37/391 (9%)
Query: 255 VFIWG----EGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
V +WG E LG GL G V +P ++ L IA GSK +
Sbjct: 2988 VMVWGLNDKEQLG-GLKGSKVK-------------VPTFSQTISRLRPIHIAGGSKSLFI 3033
Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGD 368
V++ G++++ GEG+ G+LG GV +V P + L + VA G H A+TL G
Sbjct: 3034 VSQDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGK 3093
Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
+++WG+G G LG + + PR V + +I + CG H+AAI+S G+L+T+G
Sbjct: 3094 VFSWGEG--EDGKLGHGNRTTLDKPRLVEA-LRAKKIRDVACGSSHSAAISSQGELYTWG 3150
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV--WHTAAIVEVAGKTSGSNGLSSK 486
G +G LGHGD ++ P+ V L + V +CG T A+ E
Sbjct: 3151 LGEYGRLGHGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLALTE------------DG 3198
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
+F+WGDG G+LG G +E P ++ I ++ CG ++ALT G+V++ G
Sbjct: 3199 AVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKG 3258
Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
DY +LG G + G ++ R + +A G+ H V+ +VY WG +GQ G G
Sbjct: 3259 DYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG 3318
Query: 607 DNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
+ + P LV L V V CGS+ + A
Sbjct: 3319 NTFVNKKPALVIGLDAVFVNRVACGSSHSIA 3349
Score = 167 bits (423), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 128/394 (32%), Positives = 194/394 (49%), Gaps = 29/394 (7%)
Query: 249 FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
+ G ++ WG G LGG + G I + P E+ +L +A G +
Sbjct: 4045 WGGASTIYGWGHN-HRGQLGG-LEGSRIKT--------PTPCEALSLLRPVQLAGGEQSL 4094
Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLS 366
VT G++F+ G GSGG+LG G + P L+ +L + VA G H A+T
Sbjct: 4095 FAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTE 4154
Query: 367 GDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
G++Y WG+G G LG + +S+ P+ V + G+ ++ I CG H+AAIT++G + T
Sbjct: 4155 GEVYAWGEG--EDGKLGHGNRMSYDRPKLVE-HLNGMSVADIACGSAHSAAITASGHVLT 4211
Query: 427 FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
+G G +G LGHGD P+ VE L + + +CG +G
Sbjct: 4212 WGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACG----------SGDAQTLCITDDD 4261
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
+++WGDG G+LG G ++ +P ++ + KV CG ++ALT +G V++ G
Sbjct: 4262 NVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKG 4321
Query: 547 DYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
D+ +LG GS + P ++ ++ + I IA GS H S EVYTWG GQLG
Sbjct: 4322 DFHRLGH-GSVDHVRRPKKVAA-LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLG 4379
Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
G Q P LV AL+ K + V CGS T A+
Sbjct: 4380 DGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLAL 4413
Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 149/307 (48%), Gaps = 19/307 (6%)
Query: 286 LPKVLEST--VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLID 343
+P +L S V + ++ G KH + +T +G++++WGEG GKLGHG PKL++
Sbjct: 4124 IPTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVE 4183
Query: 344 ALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL 403
LNG ++ +ACG H+ A+T SG + TWG G + G LG P+ V + G
Sbjct: 4184 HLNGMSVADIACGSAHSAAITASGHVLTWGKGRY--GRLGHGDSEDQLRPKLVEALL-GY 4240
Query: 404 QISSICCGP--WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMAS 461
+ I CG T IT ++++GDG +G LG G +P ++E+L L V
Sbjct: 4241 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVE 4300
Query: 462 CGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISF 521
CG + A+ + S ++TWG G +LGHG + P V
Sbjct: 4301 CGSQFSVALTK------------SGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 4348
Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSY 581
+A G +A + +G+V++ G D GQLG T R+ ++ ++I + CGS
Sbjct: 4349 ISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSA 4408
Query: 582 HIAVVSS 588
H +S+
Sbjct: 4409 HTLALST 4415
Score = 140 bits (352), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 144/287 (50%), Gaps = 27/287 (9%)
Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
G+V+ WGEG +G LG +G +S DR PK++E + IACGS H+ +T
Sbjct: 4155 GEVYAWGEG-EDGKLG---HGNRMSY-DR-----PKLVEHLNGMSVADIACGSAHSAAIT 4204
Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACG--EFHTCAVTLSGDLY 370
G + +WG+G G+LGHG D PKL++AL G +ACG + T +T +++
Sbjct: 4205 ASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVW 4264
Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
+WGDG + G LG+ +P K+ + GL + + CG + A+T +G ++T+G G
Sbjct: 4265 SWGDG--DYGKLGRGGSDGCKLPYKIES-LAGLGVVKVECGSQFSVALTKSGAVYTWGKG 4321
Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
F LGHG P++V L+ K + + G H A + S +++T
Sbjct: 4322 DFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSD------------SGEVYT 4369
Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
WGD EGQLG G P V KV CG + T+AL+ +
Sbjct: 4370 WGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTS 4416
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 135/287 (47%), Gaps = 35/287 (12%)
Query: 349 NIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSI 408
I VAC E ++ G LYTW L + E++H + ++G EG
Sbjct: 573 QIKQVACCETQMLILSQEGKLYTWRLAKPEAEPL-PMEEVAHDVFISIAGHCEGR----- 626
Query: 409 CCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTA 468
H AI S +++G G LGHGD + +VP ++ L++ CG ++A
Sbjct: 627 -----HFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSA 681
Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP-LCVKVSDDISF-CKVAC 526
AI T G N L TWG G +LGHG+++ R +P L V +SD + +
Sbjct: 682 AI------TCGGN------LLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGS 729
Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAV 585
G + ++ALT+ G VF+ G DYG+LG+ G P +E + ++ + GS
Sbjct: 730 GDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPR---VQRVFAGSQFSVA 786
Query: 586 VSSKSEVYTWGKGANGQLGHGDNENK----QTPTLVEALRDKQVKSV 628
+SS+ ++YTWGK LGH E P LV +L+ K++ V
Sbjct: 787 LSSEGQLYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVDV 831
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 156/325 (48%), Gaps = 30/325 (9%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
+ +AC ++++++G++++W +E +V++ I ++ G C
Sbjct: 575 KQVACCETQMLILSQEGKLYTWRLAKPEAEPLPME-EVAHDVFI-SIAGH------CEGR 626
Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAI 418
H A+ + + Y+WG G + LG + +P K++ +E + S+ CG ++AAI
Sbjct: 627 HFLAIDSNHNAYSWGTGEDHR--LGHGDTHARAVPTKIAA-LEQHCVQSVYCGCSYSAAI 683
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
T G L T+G GT+ LGHG+ S+P V L + H V + +
Sbjct: 684 TCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSD-----------HMVVDVALGSGDA 732
Query: 479 GSNGLSSKKL-FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
S L+S+ L F WGDG G+LG+G+ + P+ V+ + +V G ++AL++
Sbjct: 733 HSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQ--RVFAGSQFSVALSSE 790
Query: 538 GQVFSMGSADY--GQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
GQ+++ G A QL G R+ +++H+ I D+A H +SS EV+ W
Sbjct: 791 GQLYTWGKATCLGHQLVERSVQGCSVPRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFGW 850
Query: 596 GKGANGQLGHGDNENK---QTPTLV 617
G+ + Q+ ++ +TP LV
Sbjct: 851 GRNDSQQICPASVSSEPLLRTPILV 875
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 83/156 (53%), Gaps = 2/156 (1%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATGQVFSMG 544
K++ G+G G+LG G +P + V KVA G +ALT G+VFS G
Sbjct: 3039 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWG 3098
Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
+ G+LG T R+ ++ + I D+ACGS H A +SS+ E+YTWG G G+LG
Sbjct: 3099 EGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLG 3158
Query: 605 HGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
HGDN + P LV AL ++V V CGS + L
Sbjct: 3159 HGDNTTQLKPKLVTALAGRRVVQVACGSRDAQTLAL 3194
Score = 87.0 bits (214), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 9/175 (5%)
Query: 470 IVEVAGKTSGSNGL---SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
+ +AG G + L S+ ++WG G + +LGHGD R VP + + V C
Sbjct: 616 FISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYC 675
Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGS--YHI 583
G S + A+T G + + G Y +LG S + PT + H + D+A GS H
Sbjct: 676 GCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVV-DVALGSGDAHS 734
Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
++S+ V+ WG G G+LG+G+ P LVE+L +V+ V GS F+ A+
Sbjct: 735 LALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESL--PRVQRVFAGSQFSVAL 787
Score = 86.7 bits (213), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 14/222 (6%)
Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
A ++ +G G LG + S P E L L+ V + G A+
Sbjct: 4048 ASTIYGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVT--------- 4098
Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC--GHSITIALTATG 538
KLF G G+ G+LG G ++ +P + + KVA G +ALT G
Sbjct: 4099 ---PDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTTEG 4155
Query: 539 QVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
+V++ G + G+LG ++ ++ + DIACGS H A +++ V TWGKG
Sbjct: 4156 EVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKG 4215
Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
G+LGHGD+E++ P LVEAL + + CGS +C+
Sbjct: 4216 RYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQTLCI 4257
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 82/157 (52%), Gaps = 14/157 (8%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA--CGHSITIALTATGQVFSMG 544
KL+TW +L +AEP +P+ +V+ D+ F +A C +A+ + +S G
Sbjct: 592 KLYTW------RLAKPEAEP--LPM-EEVAHDV-FISIAGHCEGRHFLAIDSNHNAYSWG 641
Query: 545 SADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
+ + +LG + + PT+I +H ++ + CG + A ++ + TWG+G +L
Sbjct: 642 TGEDHRLGHGDTHARAVPTKIAALEQH-CVQSVYCGCSYSAAITCGGNLLTWGRGTYARL 700
Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
GHG+++++ PTLV AL D V V GS ++ L
Sbjct: 701 GHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLAL 737
Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 12/118 (10%)
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIA--CGS 580
+VAC + + L+ G++++ +L P + P +E + H IA C
Sbjct: 576 QVACCETQMLILSQEGKLYTW------RLAKPEAE---PLPME-EVAHDVFISIAGHCEG 625
Query: 581 YHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
H + S Y+WG G + +LGHGD + PT + AL V+SV CG +++AAI
Sbjct: 626 RHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAI 683
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Query: 540 VFSMGSADYGQLGS-PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
V G D QLG GS K PT + + R I IA GS + +VS +VY G+G
Sbjct: 2988 VMVWGLNDKEQLGGLKGSKVKVPTFSQTISRLRPIH-IAGGSKSLFIVSQDGKVYACGEG 3046
Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICL 640
NG+LG G N P + LR VK V S A+ L
Sbjct: 3047 TNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALAL 3088
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/346 (31%), Positives = 164/346 (47%), Gaps = 20/346 (5%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
+ D L P+ + V + + CG +H V V G +++ G G+LGH E
Sbjct: 14 LGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71
Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
P+ + AL+ NI VACGE HT A+ G +Y WG D LGL G SE +PR
Sbjct: 72 RKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG--SEECIRVPR 129
Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
+ + +QI + CG +H+ A++ A ++F +G +G LG G D + P+ +++L
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLL 188
Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
+ + + G H+ + S +F WG GQLG D R VP +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236
Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
K + CG T ALT G VF+ G+ YGQLG ++ + R + +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296
Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVE 618
+ACG H A V S +Y++G G NGQLG G N+++P V+
Sbjct: 297 TQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342
Score = 144 bits (362), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 155/326 (47%), Gaps = 21/326 (6%)
Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
+ WG S G+LG G E V P+ D + V CG HT V G +YT G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
++LG LG E S P +V ++ I ++ CG HT A+ G+++ +G + G
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
LG G VPR +++L +++ V +CG +H+ A+ + + ++F WG
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163
Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
GQLG G D + + P +K I F +VA G + + LT +G +F G +GQLG
Sbjct: 164 NKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
++ + +++ + I I CG H A ++ + V+T+G G GQLGH ++
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
P V L V V CG T+A
Sbjct: 284 NPRKVFELMGSIVTQVACGRQHTSAF 309
Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/284 (32%), Positives = 142/284 (50%), Gaps = 22/284 (7%)
Query: 291 ESTVVLDAQSI---ACGSKHAVLVTKQGQIFSWGEGSGGKLG-HGVEADVSYPKLIDALN 346
E V LDAQ+I ACG H + + +GQ+++WG S G+LG G E + P+ I +L+
Sbjct: 76 EQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLS 135
Query: 347 GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQIS 406
I VACG +H+ A++ + +++ WG + G LG + ++ + G+
Sbjct: 136 DIQIVQVACGYYHSLALSKASEVFCWGQ--NKYGQLGLGIDCQKQTSPQLIKSLLGIPFM 193
Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
+ G H+ +T +G +F +G FG LG D + VP +++L+ K V CG H
Sbjct: 194 QVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDH 253
Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVAC 526
TAA+ + G +FT+G G GQLGH + P V +VAC
Sbjct: 254 TAALTKEGG------------VFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVAC 301
Query: 527 GHSITIALT-ATGQVFSMGSADYGQLGSPGSTG--KFPTRIEGN 567
G T A ++G+++S G GQLG+ GST K P ++GN
Sbjct: 302 GRQHTSAFVPSSGRIYSFGLGGNGQLGT-GSTSNRKSPFTVKGN 344
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 130/279 (46%), Gaps = 19/279 (6%)
Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
+ WG+ + LG + E PR+ S ++ + CG HT + G ++T G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRR-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
G LGH S P +V L V +CG HT A+ + ++
Sbjct: 60 CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVACGEAHTLALND------------KGQV 105
Query: 489 FTWGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
+ WG ++GQLG G E VP +K DI +VACG+ ++AL+ +VF G
Sbjct: 106 YAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165
Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
YGQLG K P I+ + +++ +A G H V++ ++ WG+ GQLG
Sbjct: 166 YGQLGLGIDCQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
D ++ P L+++LR +++ + CG + TAA+ GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
+VF WG+ G LG ++ + +S P++++S + + +A G H+ ++T
Sbjct: 157 EVFCWGQN-KYGQLGLGIDCQKQTS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 207
Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
G IF WG G+LG E D P L+ +L I + CGE HT A+T G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
G G LG S PRKV ++ G ++ + CG HT+A + S+G++++FG G
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGN 324
Query: 433 GALGHGDRSSTSVPREVE 450
G LG G S+ P V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 166/347 (47%), Gaps = 20/347 (5%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
+ D L P+ + + + + CG +H V V G +++ G G+LGH E
Sbjct: 14 LGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71
Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
P+ + AL+ NI V+CGE HT A+ G +Y WG D LGL+G SE +PR
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVG--SEECIRVPR 129
Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
+ + +QI + CG +H+ A++ A ++F +G +G LG G D + P+ +++L
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL 188
Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
+ + + G H+ + S +F WG GQLG D R VP +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236
Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
K + CG T ALT G VF+ G+ YGQLG ++ + R + +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296
Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
+IACG H A V S +Y++G G NGQLG G N+++P V+
Sbjct: 297 TEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 140 bits (353), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 155/326 (47%), Gaps = 21/326 (6%)
Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
+ WG S G+LG G E V P+ D + V CG HT V G +YT G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
++LG LG E S P +V ++ I ++ CG HT A+ G+++ +G + G
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 435 LGH-GDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
LG G VPR +++L +++ V +CG +H+ A+ + + ++F WG
Sbjct: 116 LGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163
Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
GQLG G D + + P +K I F +VA G + + LT +G +F G +GQLG
Sbjct: 164 NKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
++ + +++ + I I CG H A ++ + V+T+G G GQLGH ++
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
P V L V + CG T+A
Sbjct: 284 NPRKVFELMGSIVTEIACGRQHTSAF 309
Score = 113 bits (282), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 129/279 (46%), Gaps = 19/279 (6%)
Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
+ WG+ LG + E PRK S ++ + CG HT + G ++T G
Sbjct: 1 MLCWGNASFGQLGLGGIDEEIVLEPRK-SDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
G LGH S P +V L V SCG HT A+ + ++
Sbjct: 60 CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105
Query: 489 FTWGDGAEGQLGH-GDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
+ WG ++GQLG G E VP +K DI +VACG+ ++AL+ +VF G
Sbjct: 106 YAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165
Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
YGQLG K P ++ + +++ +A G H V++ ++ WG+ GQLG
Sbjct: 166 YGQLGLGTDCKKQTSPQLLKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
D ++ P L+++LR +++ + CG + TAA+ GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 100/198 (50%), Gaps = 13/198 (6%)
Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
+VF WG+ G LG D + P++L+S + + +A G H+ ++T
Sbjct: 157 EVFCWGQN-KYGQLG--------LGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTL 207
Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
G IF WG G+LG E D P L+ +L I + CGE HT A+T G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
G G LG S PRKV ++ G ++ I CG HT+A + S+G++++FG G
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGN 324
Query: 433 GALGHGDRSSTSVPREVE 450
G LG G S+ P V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 164/347 (47%), Gaps = 20/347 (5%)
Query: 276 ISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
+ D L P+ + V + + CG +H V V G +++ G G+LGH E
Sbjct: 14 LGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71
Query: 336 VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPR 394
P+ + AL+ NI V+CGE HT A+ G +Y WG D LGL G SE +PR
Sbjct: 72 RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQG--SEECIRVPR 129
Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLK 453
+ + +QI + CG +H+ A++ A ++F +G +G LG G + + P+ +++L
Sbjct: 130 NIKS-LSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLL 188
Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCV 513
+ + + G H+ + S +F WG GQLG D R VP +
Sbjct: 189 GIPFMQVAAGGAHSFVLT------------LSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236
Query: 514 KVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYI 573
K + CG T ALT G VF+ G+ YGQLG ++ + R + +
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIV 296
Query: 574 EDIACGSYHI-AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA 619
IACG H A V S +Y++G G NGQLG G N+++P V+
Sbjct: 297 TQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKG 343
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 155/326 (47%), Gaps = 21/326 (6%)
Query: 317 IFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
+ WG S G+LG G E V P+ D + V CG HT V G +YT G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG- 59
Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
++LG LG E S P +V ++ I ++ CG HT A+ G+++ +G + G
Sbjct: 60 -CNDLGQLGH--EKSRKKPEQVVA-LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQ 115
Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
LG G VPR +++L +++ V +CG +H+ A+ + + ++F WG
Sbjct: 116 LGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSK------------ASEVFCWGQ 163
Query: 494 GAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
GQLG G + + + P +K I F +VA G + + LT +G +F G +GQLG
Sbjct: 164 NKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLG 223
Query: 553 SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQ 612
++ + +++ + I I CG H A ++ + V+T+G G GQLGH ++
Sbjct: 224 LNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEI 283
Query: 613 TPTLVEALRDKQVKSVVCGSNFTAAI 638
P V L V + CG T+A
Sbjct: 284 NPRKVFELMGSIVTQIACGRQHTSAF 309
Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 130/279 (46%), Gaps = 19/279 (6%)
Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
+ WG+ + LG + E PRK S ++ + CG HT + G ++T G
Sbjct: 1 MLCWGNASYGQLGLGGIDEEIVLEPRK-SDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
G LGH S P +V L V SCG HT A+ + ++
Sbjct: 60 CNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHTLALND------------KGQV 105
Query: 489 FTWGDGAEGQLG-HGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSAD 547
+ WG ++GQLG G E VP +K DI +VACG+ ++AL+ +VF G
Sbjct: 106 YAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165
Query: 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
YGQLG K P I+ + +++ +A G H V++ ++ WG+ GQLG
Sbjct: 166 YGQLGLGIECQKQTSPQLIKSLLGIPFMQ-VAAGGAHSFVLTLSGAIFGWGRNKFGQLGL 224
Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGV 644
D ++ P L+++LR +++ + CG + TAA+ GV
Sbjct: 225 NDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGV 263
Score = 96.3 bits (238), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 102/198 (51%), Gaps = 13/198 (6%)
Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
+VF WG+ G LG + + +S P++++S + + +A G H+ ++T
Sbjct: 157 EVFCWGQN-KYGQLGLGIECQKQTS--------PQLIKSLLGIPFMQVAAGGAHSFVLTL 207
Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
G IF WG G+LG E D P L+ +L I + CGE HT A+T G ++T+G
Sbjct: 208 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 267
Query: 374 DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGTF 432
G G LG S PRKV ++ G ++ I CG HT+A + S+G++++FG G
Sbjct: 268 AG--GYGQLGHNSTSHEINPRKVF-ELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGN 324
Query: 433 GALGHGDRSSTSVPREVE 450
G LG G S+ P V+
Sbjct: 325 GQLGTGSTSNRKSPFTVK 342
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 150 bits (379), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 105/324 (32%), Positives = 164/324 (50%), Gaps = 20/324 (6%)
Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
+ +ACG H+V + + G++++ G + G+LGH E + + P+ I AL +I VACGE
Sbjct: 36 VKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVACGE 93
Query: 358 FHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTA 416
H+ A++ G L++WG G LGL+ +E S +PR + ++ I + CG WH
Sbjct: 94 SHSLALSDRGQLFSWGAGSDGQLGLM--TTEDSVAVPRLIQ-KLNQQTILQVSCGNWHCL 150
Query: 417 AITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAG 475
A+ + G+ FT+G + G LG G + S + P+ V +L+ + + G H+ A+
Sbjct: 151 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL----- 205
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
SG+ +F WG GQLG D + R P VK+ ++CG T LT
Sbjct: 206 SLSGA-------VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLT 258
Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYT 594
+G VF+ G+ GQLG + R + + IACG H +A V S +Y
Sbjct: 259 KSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 595 WGKGANGQLGHGDNENKQTPTLVE 618
+G GA GQLG G N + P+ V+
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPVK 342
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 23/336 (6%)
Query: 317 IFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGD 374
+ WG S G+ G ++ V+ P++ ++ ++ VACG H+ + G++YT G
Sbjct: 1 MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCG- 59
Query: 375 GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
++ G LG E + P ++ G + I + CG H+ A++ G+LF++G G+ G
Sbjct: 60 -LNTKGQLGHEREGNK--PEQI-GALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQ 115
Query: 435 LG-HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
LG S +VPR ++ L + + SCG WH A+ + + FTWG
Sbjct: 116 LGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALA------------ADGQFFTWGK 163
Query: 494 GAEGQLGHGDAEP-RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
+ GQLG G P + P V+ + I +VA G + + AL+ +G VF G + GQLG
Sbjct: 164 NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLG 223
Query: 553 -SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENK 611
S + P ++ ++ + + I+CG H AV++ V+T+G G+ GQLGH ++
Sbjct: 224 LSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282
Query: 612 QTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIA 647
P V L +V + CG T A G+ A
Sbjct: 283 VNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYA 318
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 127/251 (50%), Gaps = 24/251 (9%)
Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
G +F WG G +G LG + E S A R L+ K+ + T++ ++CG+ H + +
Sbjct: 103 GQLFSWGAG-SDGQLG--LMTTEDSVAVPR--LIQKLNQQTIL----QVSCGNWHCLALA 153
Query: 313 KQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
GQ F+WG+ S G+LG G E + P+ + +L G + VA G H+ A++LSG ++
Sbjct: 154 ADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFG 213
Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
WG ++N G LG E P V + ++ I CG HTA +T +G +FTFG G+
Sbjct: 214 WG--MNNAGQLGLSDEKDRESPCHVK-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 270
Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
G LGH + PR V L + +CG HT A V SS ++ +
Sbjct: 271 CGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVP-----------SSGLIYAF 319
Query: 492 GDGAEGQLGHG 502
G GA GQLG G
Sbjct: 320 GCGARGQLGTG 330
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 95/199 (47%), Gaps = 13/199 (6%)
Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
G F WG+ +G LG G E S P+ + S + +A G H+ ++
Sbjct: 156 GQFFTWGKN-SHGQLG---LGKEFPSQAS-----PQRVRSLEGIPLAQVAAGGAHSFALS 206
Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
G +F WG + G+LG E D P + L + ++CGE HT +T SG ++T+
Sbjct: 207 LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTF 266
Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
G G + G LG S PR+V ++ G +++ I CG HT A + S+G ++ FG G
Sbjct: 267 GAG--SCGQLGHDSMNDEVNPRRVL-ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGA 323
Query: 432 FGALGHGDRSSTSVPREVE 450
G LG G + P V+
Sbjct: 324 RGQLGTGHTCNVKCPSPVK 342
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 35/165 (21%)
Query: 215 GLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGV 274
G+ A + A SF +SLS G VF WG N
Sbjct: 189 GIPLAQVAAGGAHSFALSLS------------------GAVFGWGMN----------NAG 220
Query: 275 EISSADRRDALLP---KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG 331
++ +D +D P K+L + V+ I+CG +H ++TK G +F++G GS G+LGH
Sbjct: 221 QLGLSDEKDRESPCHVKLLRTQKVV---YISCGEEHTAVLTKSGGVFTFGAGSCGQLGHD 277
Query: 332 VEADVSYPKLIDALNGSNIHMVACGEFHTCA-VTLSGDLYTWGDG 375
D P+ + L GS + +ACG HT A V SG +Y +G G
Sbjct: 278 SMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCG 322
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 175/344 (50%), Gaps = 28/344 (8%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
A G H++L+ +++S G+ S G+LG + P+ I ALN ++ +V+CG+ H+
Sbjct: 28 ASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVSCGKEHSV 87
Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
AV G ++ WG G +G+ EIS ++P K+ + G++I + CG +H+ A++
Sbjct: 88 AVCHKGKVFAWGAGSEGQLGIGEFKEIS-FMPTKIKA-LAGIKIIQVSCGHYHSLALSED 145
Query: 422 GKLFTFGDGTFGALGHGDRS-STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
G +F++G + G LG G S S ++P++V++L+ + + G H+ A+ +G+
Sbjct: 146 GHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHSFAL-----SLTGT 200
Query: 481 NGLSSKKLFTWGDGAEGQL---GHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
+ F WG GQL G+ E P + ++S ++CG+ T LT
Sbjct: 201 S-------FGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVLTEE 253
Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTW 595
GQVF+ G GQL SP S + P IEG I R + I C SYH IA V + +V +
Sbjct: 254 GQVFTFGGNSSGQLQPSPRSGQRGPQLIEG-IGGR-VSQIECASYHTIAYVYTTGQVVSL 311
Query: 596 GKG----ANGQLGHGDNENKQTPTLV--EALRDKQVKSVVCGSN 633
G+G +N EN L+ E L D +VK + G++
Sbjct: 312 GRGPSHTSNPTHQEAPAENSDITCLLAAEDLVDIEVKDIFAGAH 355
Score = 113 bits (283), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 132/263 (50%), Gaps = 20/263 (7%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDAL 345
P+ +++ L ++CG +H+V V +G++F+WG GS G+LG G ++S+ P I AL
Sbjct: 65 PEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL 124
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
G I V+CG +H+ A++ G +++WG LG+ S S IP+KV +EG+ +
Sbjct: 125 AGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSR-SQAIPQKVKS-LEGIPL 182
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGAL---GHGDRSSTSVPREVETLKELKTVMASC 462
+ + G H+ A++ G F +G G L G+ + P + LK L + SC
Sbjct: 183 AQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISC 242
Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK-VSDDISF 521
G HTA + E ++FT+G + GQL + P ++ + +S
Sbjct: 243 GYEHTAVLTE------------EGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGGRVSQ 290
Query: 522 CKVACGHSITIALTATGQVFSMG 544
+ A H+I T TGQV S+G
Sbjct: 291 IECASYHTIAYVYT-TGQVVSLG 312
Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 119/252 (47%), Gaps = 19/252 (7%)
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
PR++ G+++ G H+ + S ++++ GD ++G LG ST P ++ L
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71
Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVPL 511
+L + SCG H+ A+ K+F WG G+EGQLG G+ E +P
Sbjct: 72 NDLHVDLVSCGKEHSVAVCH------------KGKVFAWGAGSEGQLGIGEFKEISFMPT 119
Query: 512 CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ--LGSPGSTGKFPTRIEGNIK 569
+K I +V+CGH ++AL+ G VFS G GQ LG + P +++ +++
Sbjct: 120 KIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVK-SLE 178
Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQT---PTLVEALRDKQVK 626
+ +A G H +S + WG +GQL N+ K+ P + AL++ V
Sbjct: 179 GIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVI 238
Query: 627 SVVCGSNFTAAI 638
+ CG TA +
Sbjct: 239 YISCGYEHTAVL 250
Score = 96.7 bits (239), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 117/253 (46%), Gaps = 18/253 (7%)
Query: 227 DSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALL 286
+ + L S S CH+ G VF WG G G LG EIS +
Sbjct: 72 NDLHVDLVSCGKEHSVAVCHK-----GKVFAWGAG-SEGQLGIG-EFKEIS-------FM 117
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDAL 345
P +++ + ++CG H++ +++ G +FSWG S G+LG G + + P+ + +L
Sbjct: 118 PTKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL 177
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQ 404
G + VA G H+ A++L+G + WG L L G + + P + G ++ L
Sbjct: 178 EGIPLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSI-GALKNLS 236
Query: 405 ISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGV 464
+ I CG HTA +T G++FTFG + G L RS P+ +E + + C
Sbjct: 237 VIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGG-RVSQIECAS 295
Query: 465 WHTAAIVEVAGKT 477
+HT A V G+
Sbjct: 296 YHTIAYVYTTGQV 308
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 561 PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
P R++ + A G +H ++ S VY+ G + GQLG +++ + P ++AL
Sbjct: 12 PRRLKAGTSGIELLQAASGEHHSLLLFSNHRVYSCGDNSWGQLGQRRDQSTERPEPIQAL 71
Query: 621 RDKQVKSVVCGSNFTAAICLHKGVSIA 647
D V V CG + A+C HKG A
Sbjct: 72 NDLHVDLVSCGKEHSVAVC-HKGKVFA 97
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
L I+CG +H ++T++GQ+F++G S G+L + P+LI+ + G + + C
Sbjct: 235 LSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPRSGQRGPQLIEGIGG-RVSQIEC 293
Query: 356 GEFHTCA-VTLSGDLYTWGDG 375
+HT A V +G + + G G
Sbjct: 294 ASYHTIAYVYTTGQVVSLGRG 314
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 176/358 (49%), Gaps = 38/358 (10%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
++CG +H+ +VT +++ +G + G+LG G ++ +S P + AL + + ACG HT
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHT 99
Query: 361 CAVTLSGDLY-TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
T G++Y T G+ LG LG E + + +S +I + G +AA+T
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG-LGDTEERNTF--HVISFFTSEHKIKQLSAGSNTSAALT 156
Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
G+LF +GD + G +G + S+ VP++V K + + SCG +H+A + T G
Sbjct: 157 EDGRLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWI--SCGYYHSAFVT-----TDG 209
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGD---AEPRVVPLCVKVSDDISFCKVACGHSITIALTA 536
+L+ +G+ G+LG + R L ++ + + +VACG T+ LT
Sbjct: 210 -------ELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV--IQVACGGEHTVVLTE 260
Query: 537 TGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAVVSSKS 590
V++ G +GQLG G F P IE NI+ + I I+CG H A+++
Sbjct: 261 NA-VYTFGLGQFGQLG----LGTFLFETSEPKVIE-NIRDQTISYISCGENHTALITDIG 314
Query: 591 EVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCGS-NFTAAICLHKGVS 645
+YT+G G +G+LG G + N PTL VK V CG + H+GV+
Sbjct: 315 LMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCHMVVFAAPHRGVA 372
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 287 PKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDA 344
PKV+E+ I+CG H L+T G ++++G+G GKLG G+E ++ P L
Sbjct: 286 PKVIENIRDQTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSN 345
Query: 345 LNGSNIHMVACGEFH 359
+ +VACG H
Sbjct: 346 FLRFIVKLVACGGCH 360
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 168/348 (48%), Gaps = 47/348 (13%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
++CG +H +VT +++ +G + G+LG G ++ VS P + AL + ACG HT
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEIS--HWIPRKVSGQMEGLQISSICCGPWHTAAI 418
T G +Y G LG E S H I S + +I + G +AA+
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQR----KIKQLSAGSNTSAAL 155
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
T G+LF +GD + G +G + ++ VP++V K + + SCG +H+A + T
Sbjct: 156 TEDGELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISWI--SCGYYHSAFVT-----TE 208
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDA------EPRVVP-LCVKVSDDISFCKVACGHSIT 531
G +L+T+G+ G+LG + P+ VP + KV +VACG T
Sbjct: 209 G-------QLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKV------VQVACGGGHT 255
Query: 532 IALTATGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACGSYHIAV 585
+ LT V++ G +GQLG G F P IE +IK + I IACG H A+
Sbjct: 256 VVLTEKA-VYTFGLGQFGQLG----LGTFLFETSVPKAIE-HIKDQKISFIACGENHTAL 309
Query: 586 VSSKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
++ +YT+G G +G+LG G ++ N+ PTL V+ V CG
Sbjct: 310 ITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCG 357
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 126/276 (45%), Gaps = 50/276 (18%)
Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHT 467
+ CG HTA +T KL+ FG +G LG G +S+ S P V+ LK K A+CG HT
Sbjct: 40 LSCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHT 99
Query: 468 AAIVE------VAGKTSGSNGL----------------SSKK------------------ 487
E G G GL S +K
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLGLGDTEERSTFHLISFFTSQRKIKQLSAGSNTSAALTEDG 159
Query: 488 -LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
LF WGD +EGQ+G + VP V V IS+ ++CG+ + +T GQ+++ G
Sbjct: 160 ELFMWGDNSEGQIGLENVTNVCVPQQVTVGKPISW--ISCGYYHSAFVTTEGQLYTFGEP 217
Query: 547 DYGQLGSPGS---TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
+ G+LG P + P + G I + ++ +ACG H V++ K+ VYT+G G GQL
Sbjct: 218 ECGKLGLPNQLLVNHRMPQPVPG-IPGKVVQ-VACGGGHTVVLTEKA-VYTFGLGQFGQL 274
Query: 604 GHGDNE-NKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
G G P +E ++D+++ + CG N TA I
Sbjct: 275 GLGTFLFETSVPKAIEHIKDQKISFIACGENHTALI 310
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVS--YPKLID 343
+PK +E IACG H L+T G ++++G+G GKLG G+E + P L
Sbjct: 285 VPKAIEHIKDQKISFIACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCS 344
Query: 344 ALNGSNIHMVACGEFHT 360
+ +V+CG HT
Sbjct: 345 NFLRFIVQLVSCGGCHT 361
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 130 bits (327), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/354 (29%), Positives = 167/354 (47%), Gaps = 59/354 (16%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
++CG +H +VT +++ +G + G+LG G +A + P I AL + + ACG HT
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99
Query: 361 CAVTLSGDLYTWGDGIHNLGLLG--------QVSEISHWIPRKVSGQMEGLQISSICCGP 412
T +G +Y G +N G LG +I + P I + G
Sbjct: 100 LVSTDTGGVYAAGG--NNEGQLGLGDTDDRDTFHQIVFFTPADT--------IKQLSAGA 149
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
+AA+T GKLF +GD + G +G D+S+ +P EV K + + SCG +H +A V
Sbjct: 150 NTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTVGKPISWI--SCGYYH-SAFVT 206
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-------AEPRVVPLCVKVSDDISFCKVA 525
+ G +L+T+G+ G+LG + + RV+ + +V +VA
Sbjct: 207 MDG-----------ELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERV------IQVA 249
Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF------PTRIEGNIKHRYIEDIACG 579
CG T+ LT V++ G +GQLG G F P IE IK + I I+CG
Sbjct: 250 CGGGHTVVLTEK-VVYAFGLGQFGQLG----LGTFLFETSEPKIIE-RIKDQKICHISCG 303
Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHG--DNENKQTPTLVEALRDKQVKSVVCG 631
H A+++ +YT+G G +G+LG G + N+ PTL V+ + CG
Sbjct: 304 ENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACG 357
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 143/297 (48%), Gaps = 33/297 (11%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDALNGSNIHMVACGEFHT 360
ACG H ++ T G +++ G + G+LG G D ++ +++ I ++ G +
Sbjct: 93 ACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIKQLSAGANTS 152
Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITS 420
A+T G L+ WGD ++ G +G + + IP +V+ G IS I CG +H+A +T
Sbjct: 153 AALTEDGKLFMWGD--NSEGQIGLEDKSNVCIPHEVTV---GKPISWISCGYYHSAFVTM 207
Query: 421 AGKLFTFGDGTFGALGHGDR--SSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
G+L+TFG+ G LG + + P+ V + E + + +CG HT + E
Sbjct: 208 DGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPE-RVIQVACGGGHTVVLTE------ 260
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHG-----DAEPRVVPLCVKVSDDISFCKVACGHSITIA 533
K ++ +G G GQLG G +EP++ ++ D C ++CG + T
Sbjct: 261 -------KVVYAFGLGQFGQLGLGTFLFETSEPKI----IERIKDQKICHISCGENHTAL 309
Query: 534 LTATGQVFSMGSADYGQ--LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
+T G +++ G +G+ LG T +F + N ++ IACG H+ V ++
Sbjct: 310 MTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVFAT 366
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 20/218 (9%)
Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
G +F+WG+ G +G D+ + +P E TV I+CG H+ VT
Sbjct: 159 GKLFMWGDN-SEGQIG---------LEDKSNVCIPH--EVTVGKPISWISCGYYHSAFVT 206
Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSY--PKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
G+++++GE GKLG E +++ P+ + + I VACG HT +T +
Sbjct: 207 MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERVIQ-VACGGGHTVVLT---EKV 262
Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
+ G+ G LG + + K+ +++ +I I CG HTA +T G L+TFGDG
Sbjct: 263 VYAFGLGQFGQLGLGTFLFETSEPKIIERIKDQKICHISCGENHTALMTELGLLYTFGDG 322
Query: 431 TFGALGHGDRSSTS--VPREVETLKELKTVMASCGVWH 466
G LG G + T+ P + +CG H
Sbjct: 323 RHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH 360
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFT 635
++CG H A+V+ +++Y +G GQLG G PT ++AL+ ++VK CG N T
Sbjct: 40 LSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHT 99
Query: 636 AAICLHKGVSIA 647
GV A
Sbjct: 100 LVSTDTGGVYAA 111
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 130 bits (327), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 170/363 (46%), Gaps = 51/363 (14%)
Query: 305 SKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVT 364
+ H++++T +G+++SWG G+LGHG + PKLI+ L I ACG HT A+T
Sbjct: 132 AAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALT 191
Query: 365 LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
+G +YT+G+ + LG LGQ ++ + + Q G I + CG + + G L
Sbjct: 192 ENGTVYTFGE--NKLGQLGQGNQTDA-VLSPATIQYNGQPIVKVACGAEFSMIVDCKGNL 248
Query: 425 FTFGDGTFGALGHG------------DRSSTSVPREVETLKE---------LKTVMA--- 460
++FG +G LGH + +PR V E + V+A
Sbjct: 249 YSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDV 308
Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD--D 518
+CG HT + S K++F+WG G G+LGH + + +VP VK+ D
Sbjct: 309 ACGANHTLVLD------------SQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPG 356
Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIAC 578
++ CG+ + AL+ G +F G + + + +P ++ ++ I +AC
Sbjct: 357 RGATQIYCGYQCSFALSEMGGLFFWGVTNTSR-----ESTMYPKAVQ-DLCGWKIRSLAC 410
Query: 579 GSYHIAVVSSKSEVYTWGKGAN-GQLGHGDNENKQTPTL--VEALRDKQVKSVVCGSNFT 635
G I V + S + +WG G+LG+GDN+ K + T V+ L + VV G + +
Sbjct: 411 GKSSIIVAADDSTI-SWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHS 469
Query: 636 AAI 638
I
Sbjct: 470 LVI 472
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 139/343 (40%), Gaps = 49/343 (14%)
Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
++ D + PK++E + ACG H + +T+ G ++++GE G+LG G +
Sbjct: 154 QLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQT 213
Query: 335 DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE------- 387
D NG I VACG + V G+LY++ G G LG S+
Sbjct: 214 DAVLSPATIQYNGQPIVKVACGAEFSMIVDCKGNLYSF--GCPEYGQLGHNSDGKFIARA 271
Query: 388 -----ISHWIPRKVS--------GQ---MEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
IPR+V+ GQ + + + CG HT + S ++F++G G
Sbjct: 272 QRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGFGG 331
Query: 432 FGALGHGDRSSTSVPREVETLK--ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
+G LGH ++ VPR V+ CG + A+ E+ G LF
Sbjct: 332 YGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYCGYQCSFALSEMGG------------LF 379
Query: 490 TWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG-SADY 548
WG + + E + P V+ +ACG S +I + A S G S +
Sbjct: 380 FWG------VTNTSRESTMYPKAVQDLCGWKIRSLACGKS-SIIVAADDSTISWGPSPTF 432
Query: 549 GQLGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVSSK 589
G+LG + K T + + Y E + G H V++ +
Sbjct: 433 GELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVIARQ 475
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 118/217 (54%), Gaps = 15/217 (6%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFH 359
I CG H++ ++K G++F+WG+ G+LG G + + P++++ L G + ++ GE H
Sbjct: 143 ITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAH 202
Query: 360 TCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAIT 419
+ A+++SG++Y+WG + G LG S P + G ++ ++ + CG H+A +T
Sbjct: 203 SMALSMSGNIYSWGK--NECGQLGLGHTESKDDPSLIEG-LDNQKVEFVACGGSHSALLT 259
Query: 420 SAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
G LFTFG G G LGH + P V L + +CG WHT A V G
Sbjct: 260 QDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLAYVSDLG---- 315
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVS 516
K+F++G G +GQLG+G +++PL VKVS
Sbjct: 316 -------KVFSFGSGKDGQLGNGGTRDQLMPLPVKVS 345
Score = 109 bits (273), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 157/365 (43%), Gaps = 34/365 (9%)
Query: 268 GGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGK 327
GGA V A A PK ++ + S+ G++H ++++ G+ F + S
Sbjct: 69 GGAGVQVHQLLAGSGGARTPKCIKLGKNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKH 128
Query: 328 LGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSE 387
L + L I + CG++H+ A++ G+L+ WG +H G LG +
Sbjct: 129 L-----------RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLH--GQLGVGRK 175
Query: 388 ISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPR 447
++ + G+ ++ I G H+ A++ +G ++++G G LG G S P
Sbjct: 176 FPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPS 235
Query: 448 EVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPR 507
+E L K +CG H+A + + +GL LFT+G G GQLGH +
Sbjct: 236 LIEGLDNQKVEFVACGGSHSALLTQ--------DGL----LFTFGAGKHGQLGHNSTQNE 283
Query: 508 VVPLCVKVSDDISFCKVACGHSITIALTA-TGQVFSMGSADYGQLGSPGSTGK---FPTR 563
+ P V ++ACG T+A + G+VFS GS GQLG+ G+ + P +
Sbjct: 284 LRPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVK 343
Query: 564 IEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDK 623
+ + + + +E I + + W K N + N + PTL E +
Sbjct: 344 VSSSEELK-LESHTSEKELIMIAGGNQSILLWIKKENSYV----NLKRTIPTLNEGTVKR 398
Query: 624 QVKSV 628
+ V
Sbjct: 399 WIADV 403
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 104/200 (52%), Gaps = 13/200 (6%)
Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
G++F WG+ L +G LG G + S P+++E + I+ G H++ ++
Sbjct: 157 GELFAWGQNL-HGQLGV---GRKFPSTTT-----PQIVEHLAGVPLAQISAGEAHSMALS 207
Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
G I+SWG+ G+LG G P LI+ L+ + VACG H+ +T G L+T+
Sbjct: 208 MSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTF 267
Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAA-ITSAGKLFTFGDGT 431
G G H G LG S + P V+ ++ G +++ I CG WHT A ++ GK+F+FG G
Sbjct: 268 GAGKH--GQLGHNSTQNELRPCLVA-ELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGK 324
Query: 432 FGALGHGDRSSTSVPREVET 451
G LG+G +P V+
Sbjct: 325 DGQLGNGGTRDQLMPLPVKV 344
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 116/239 (48%), Gaps = 26/239 (10%)
Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA 460
+ ++I S+ G H ++S GK F + D S R L+E K +
Sbjct: 95 KNMKIHSVDQGAEHMLILSSDGKPFEY-----------DNYSMKHLRFESILQEKKIIQI 143
Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEP-RVVPLCVKVSDDI 519
+CG +H+ A+ S G +LF WG GQLG G P P V+ +
Sbjct: 144 TCGDYHSLAL---------SKG---GELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGV 191
Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIAC 578
+++ G + ++AL+ +G ++S G + GQLG + K P+ IEG + ++ +E +AC
Sbjct: 192 PLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEG-LDNQKVEFVAC 250
Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
G H A+++ ++T+G G +GQLGH +N+ P LV L +V + CG T A
Sbjct: 251 GGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWHTLA 309
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
Query: 523 KVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY----IEDIAC 578
++ CG ++AL+ G++F+ G +GQLG KFP+ I + I+
Sbjct: 142 QITCGDYHSLALSKGGELFAWGQNLHGQLGV---GRKFPSTTTPQIVEHLAGVPLAQISA 198
Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
G H +S +Y+WGK GQLG G E+K P+L+E L +++V+ V CG + +A +
Sbjct: 199 GEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALL 258
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 163/347 (46%), Gaps = 35/347 (10%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY-PKLIDA 344
LP+ +++ L ++CG +H++ V +G++F+WG GS G+LG G ++S+ PK I
Sbjct: 65 LPEPIQALETLIVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMT 124
Query: 345 LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-SHWIPRKVSGQMEGL 403
LN I V+CG +H+ A++ +++WG H G LG E S P++V +EG+
Sbjct: 125 LNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSH--GQLGLGKEFPSQASPQRVRS-LEGI 181
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS---STSVPREVETLKELKTVMA 460
++ + G H+ A++ G F +G + G L R+ ++ P V LK L V
Sbjct: 182 PLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYI 241
Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS 520
SCG HTA + + K+FT+GD GQLG+ + P V+ D +
Sbjct: 242 SCGDAHTAVLTQ------------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGL- 288
Query: 521 FCKVACGHSITIALT-ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
++ CG T+A TGQV S G P T K PT E ++ DI+C
Sbjct: 289 VSQIDCGSYHTLAYVHTTGQVVSFGHG-------PSDTSK-PTHPEALTENF---DISCL 337
Query: 580 SYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTP--TLVEALRDKQ 624
V + + G AN H D + + P TL E R Q
Sbjct: 338 ISAEDFVDVQVKHIFAGTYANFVTTHQDTSSTRAPGKTLPEISRISQ 384
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 168/351 (47%), Gaps = 36/351 (10%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
A G +H++L+ ++ S G+ S G+LG P+ I AL + +V+CG+ H+
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSL 88
Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
AV G ++ WG G +G+ EIS + P+K+ + ++I + CG +H+ A++
Sbjct: 89 AVCHKGRVFAWGAGSEGQLGIGEFKEIS-FTPKKIM-TLNDIKIIQVSCGHYHSLALSKD 146
Query: 422 GKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGS 480
++F++G + G LG G + S + P+ V +L+ + + G H+ A+ + G +
Sbjct: 147 SQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFAL-SLCGTS--- 202
Query: 481 NGLSSKKLFTWGDGAEGQLGHGDAEPRVV---PLCVKVSDDISFCKVACGHSITIALTAT 537
F WG + GQL V PL V ++ ++CG + T LT
Sbjct: 203 --------FGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVYISCGDAHTAVLTQD 254
Query: 538 GQVFSMGSADYGQLG-SPGSTGKFPT---RIEGNIKHRYIEDIACGSYH-IAVVSSKSEV 592
G+VF+ G GQLG SP + P RI+G + I CGSYH +A V + +V
Sbjct: 255 GKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-----LVSQIDCGSYHTLAYVHTTGQV 309
Query: 593 YTWGKGAN--GQLGHGD--NENKQTPTLVEA--LRDKQVKSVVCGS--NFT 635
++G G + + H + EN L+ A D QVK + G+ NF
Sbjct: 310 VSFGHGPSDTSKPTHPEALTENFDISCLISAEDFVDVQVKHIFAGTYANFV 360
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 117/257 (45%), Gaps = 27/257 (10%)
Query: 392 IPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET 451
+ R+ + G ++ G H+ + + ++ + GD + G LG +P ++
Sbjct: 12 LQRRRTAGSPGAELLQAASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQA 71
Query: 452 LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVP 510
L+ L + SCG H+ A+ ++F WG G+EGQLG G+ E P
Sbjct: 72 LETLIVDLVSCGKEHSLAVCH------------KGRVFAWGAGSEGQLGIGEFKEISFTP 119
Query: 511 LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIK 569
+ +DI +V+CGH ++AL+ QVFS G +GQLG GK FP++ +
Sbjct: 120 KKIMTLNDIKIIQVSCGHYHSLALSKDSQVFSWGKNSHGQLG----LGKEFPSQASPQ-R 174
Query: 570 HRYIEDI-----ACGSYHIAVVSSKSEVYTWGKGANGQLG-HGDNENKQT--PTLVEALR 621
R +E I A G H +S + WG + GQL G N Q+ P V AL+
Sbjct: 175 VRSLEGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALK 234
Query: 622 DKQVKSVVCGSNFTAAI 638
+ V + CG TA +
Sbjct: 235 NLGVVYISCGDAHTAVL 251
Score = 37.0 bits (84), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTA 636
A G H ++ + V + G + GQLG + + P ++AL V V CG +
Sbjct: 29 ASGERHSLLLLTNHRVLSCGDNSRGQLGRRGAQRGELPEPIQALETLIVDLVSCGKEHSL 88
Query: 637 AICLHKGVSIA 647
A+C HKG A
Sbjct: 89 AVC-HKGRVFA 98
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 23/314 (7%)
Query: 291 ESTVVLDAQSIACGS--KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
E + L Q+ GS + T +IF G G LG G P+ +D+LNG
Sbjct: 39 EEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGK 98
Query: 349 NIHMVACGEF-HTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQIS 406
I ++ G H T G+++TWG HN LG + +P +S + Q+
Sbjct: 99 KIACLSYGSGPHIVLATTEGEVFTWG---HNAYSQLGNGTTNHGLVPCHISTNLSNKQVI 155
Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVW 465
+ CG +H+ +TS G++F +G G +G G + +PR V + K V+ +CG
Sbjct: 156 EVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQM 215
Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
A+V+ + +++ WG GQLG G++ + P V I +VA
Sbjct: 216 CCMAVVD------------TGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVA 263
Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIA 584
CG++ T+ LT GQV++ G+ YGQLG+ + + +PT + K R IE AC S H +
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE-KDRIIEIAACHSTHTS 322
Query: 585 VVSSK-SEVYTWGK 597
++ VY WG+
Sbjct: 323 AAKTQGGHVYMWGQ 336
Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 109/220 (49%), Gaps = 17/220 (7%)
Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
++F G G LG GD ST PR +++L K S G + G+
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGE------ 119
Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS---FCKVACGHSITIALTATGQ 539
+FTWG A QLG+G +VP +S ++S +VACG ++ LT+ G+
Sbjct: 120 -----VFTWGHNAYSQLGNGTTNHGLVP--CHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 540 VFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
VF+ G + GQ+GS + + P R+ G ++++ + IACG V EVY WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
NGQLG G++ N+ TP V AL+ +V+ V CG T +
Sbjct: 233 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 131/272 (48%), Gaps = 25/272 (9%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGS----KHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
D + + P+ L+S L+ + IAC S H VL T +G++F+WG + +LG+G
Sbjct: 82 DVQSTIEPRRLDS---LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNH 138
Query: 336 VSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
P I L+ + VACG +H+ +T G+++ WG +N G +G S ++ IPR
Sbjct: 139 GLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG--YNNSGQVGSGSTVNQPIPR 196
Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
+V+G ++ + +I CG A+ G+++ +G G LG G+ + P V L+
Sbjct: 197 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 256
Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
++ +CG HT + + +++ WG + GQLG G+ + P V
Sbjct: 257 IRVQRVACGYAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSYPTPVT 304
Query: 515 VSDDISFCKVACGHS--ITIALTATGQVFSMG 544
V D ++A HS + A T G V+ G
Sbjct: 305 VEKD-RIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 25/234 (10%)
Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAA 469
GP H T+ G++FT+G + LG+G + VP + T L + + +CG +H+
Sbjct: 108 GP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLV 166
Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVA 525
+ S ++F WG GQ+G G PR V C++ ++ +A
Sbjct: 167 LT------------SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT---IA 211
Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHI 583
CG +A+ TG+V+ G GQLG G++G PT R+ ++ ++ +ACG H
Sbjct: 212 CGQMCCMAVVDTGEVYVWGYNGNGQLGL-GNSGNQPTPCRVAA-LQGIRVQRVACGYAHT 269
Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
V++ + +VY WG + GQLG G+ N+ PT V +D+ ++ C S T+A
Sbjct: 270 LVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 323
Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 21/181 (11%)
Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK----VLESTVVLDAQSIACGSKHA 308
G+VF WG N ++ S + +P+ L++ VV+ +IACG
Sbjct: 171 GEVFAWGYN----------NSGQVGSGSTVNQPIPRRVTGCLQNKVVV---TIACGQMCC 217
Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
+ V G+++ WG G+LG G + P + AL G + VACG HT +T G
Sbjct: 218 MAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT-AAITSAGKLFTF 427
+Y W G ++ G LG ++ + P V+ + + + I C HT AA T G ++ +
Sbjct: 278 VYAW--GANSYGQLGTGNKSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMW 334
Query: 428 G 428
G
Sbjct: 335 G 335
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 23/314 (7%)
Query: 291 ESTVVLDAQSIACGS--KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
E + L Q+ GS + T +IF G G LG G P+ +D+LNG
Sbjct: 39 EEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGK 98
Query: 349 NIHMVACGEF-HTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQIS 406
I ++ G H T G+++TWG HN LG + +P +S + Q+
Sbjct: 99 KIACLSYGSGPHIVLATTEGEVFTWG---HNAYSQLGNGTTNHGLVPCHISTNLSNKQVI 155
Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVW 465
+ CG +H+ +TS G++F +G G +G G + +PR V + K V+ +CG
Sbjct: 156 EVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQM 215
Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
A+V+ + +++ WG GQLG G++ + P V I +VA
Sbjct: 216 CCMAVVD------------TGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVA 263
Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIA 584
CG++ T+ LT GQV++ G+ YGQLG+ + + +PT + K R IE AC S H +
Sbjct: 264 CGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE-KDRIIEIAACHSTHTS 322
Query: 585 VVSSK-SEVYTWGK 597
++ VY WG+
Sbjct: 323 AAKTQGGHVYMWGQ 336
Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 109/220 (49%), Gaps = 17/220 (7%)
Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
++F G G LG GD ST PR +++L K S G + G+
Sbjct: 66 EIFVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGE------ 119
Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS---FCKVACGHSITIALTATGQ 539
+FTWG A QLG+G +VP +S ++S +VACG ++ LT+ G+
Sbjct: 120 -----VFTWGHNAYSQLGNGTTNHGLVP--CHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 540 VFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
VF+ G + GQ+GS + + P R+ G ++++ + IACG V EVY WG
Sbjct: 173 VFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYN 232
Query: 599 ANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
NGQLG G++ N+ TP V AL+ +V+ V CG T +
Sbjct: 233 GNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
Score = 110 bits (276), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 131/272 (48%), Gaps = 25/272 (9%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGS----KHAVLVTKQGQIFSWGEGSGGKLGHGVEAD 335
D + + P+ L+S L+ + IAC S H VL T +G++F+WG + +LG+G
Sbjct: 82 DVQSTIEPRRLDS---LNGKKIACLSYGSGPHIVLATTEGEVFTWGHNAYSQLGNGTTNH 138
Query: 336 VSYPKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR 394
P I L+ + VACG +H+ +T G+++ WG +N G +G S ++ IPR
Sbjct: 139 GLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG--YNNSGQVGSGSTVNQPIPR 196
Query: 395 KVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE 454
+V+G ++ + +I CG A+ G+++ +G G LG G+ + P V L+
Sbjct: 197 RVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 256
Query: 455 LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVK 514
++ +CG HT + + +++ WG + GQLG G+ + P V
Sbjct: 257 IRVQRVACGYAHTLVLTD------------EGQVYAWGANSYGQLGTGNKSNQSYPTPVT 304
Query: 515 VSDDISFCKVACGHS--ITIALTATGQVFSMG 544
V D ++A HS + A T G V+ G
Sbjct: 305 VEKD-RIIEIAACHSTHTSAAKTQGGHVYMWG 335
Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 116/234 (49%), Gaps = 25/234 (10%)
Query: 411 GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAA 469
GP H T+ G++FT+G + LG+G + VP + T L + + +CG +H+
Sbjct: 108 GP-HIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLV 166
Query: 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVA 525
+ S ++F WG GQ+G G PR V C++ ++ +A
Sbjct: 167 LT------------SDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVT---IA 211
Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHI 583
CG +A+ TG+V+ G GQLG G++G PT R+ ++ ++ +ACG H
Sbjct: 212 CGQMCCMAVVDTGEVYVWGYNGNGQLGL-GNSGNQPTPCRVAA-LQGIRVQRVACGYAHT 269
Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
V++ + +VY WG + GQLG G+ N+ PT V +D+ ++ C S T+A
Sbjct: 270 LVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAACHSTHTSA 323
Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 21/181 (11%)
Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK----VLESTVVLDAQSIACGSKHA 308
G+VF WG N ++ S + +P+ L++ VV+ +IACG
Sbjct: 171 GEVFAWGYN----------NSGQVGSGSTVNQPIPRRVTGCLQNKVVV---TIACGQMCC 217
Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
+ V G+++ WG G+LG G + P + AL G + VACG HT +T G
Sbjct: 218 MAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT-AAITSAGKLFTF 427
+Y W G ++ G LG ++ + P V+ + + + I C HT AA T G ++ +
Sbjct: 278 VYAW--GANSYGQLGTGNKSNQSYPTPVTVEKDRI-IEIAACHSTHTSAAKTQGGHVYMW 334
Query: 428 G 428
G
Sbjct: 335 G 335
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/348 (29%), Positives = 149/348 (42%), Gaps = 59/348 (16%)
Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW---- 372
+++WG G G P + LN + + VA G VT SG L W
Sbjct: 314 VYAWGGGLG------------TPLRLPMLN-TEVVQVAAGRTQKAGVTRSGRLILWEAPP 360
Query: 373 -GDGIHNLGLLGQVSEIS-HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
G G +L L G V + +I R + GQ G+ I + CG + TA +T G + TFG G
Sbjct: 361 LGAGGGSL-LPGAVEQPQPQFISRFLEGQ-SGVTIKHVACGDFFTACLTDRGIIMTFGSG 418
Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
+ G LGHG + S P VE L + V +CG H A+ + ++LF
Sbjct: 419 SNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALS------------TERELFA 466
Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
WG G G+LG G E P V + +V CG ++ LT GQ + GS + +
Sbjct: 467 WGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNK 526
Query: 551 LGSPG-STGKFPTRIEGNIKHRYIED-------------------IACGSYHIAVVSSKS 590
LG S G+ P + H+ +E+ I G+ H A V++
Sbjct: 527 LGLDHLSLGEEP------VPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASG 580
Query: 591 EVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+ YT+G +GQLG + P V+ L ++ V CG FT AI
Sbjct: 581 DCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAI 628
Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 176/397 (44%), Gaps = 52/397 (13%)
Query: 252 LGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLV 311
L V+ WG GLG L LP +L + VV +A G V
Sbjct: 311 LSSVYAWGGGLGTPLR------------------LP-MLNTEVV----QVAAGRTQKAGV 347
Query: 312 TKQGQIFSW-----GEGSGGKLGHGVEADVS--YPKLIDALNGSNIHMVACGEFHTCAVT 364
T+ G++ W G G G L VE + ++ +G I VACG+F T +T
Sbjct: 348 TRSGRLILWEAPPLGAGGGSLLPGAVEQPQPQFISRFLEGQSGVTIKHVACGDFFTACLT 407
Query: 365 LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
G + T+G G + G +++IS P V + G ++ + CG H A+++ +L
Sbjct: 408 DRGIIMTFGSGSNGCLGHGSLTDISQ--PTIVEALL-GYEMVQVACGASHVLALSTEREL 464
Query: 425 FTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT--SGSNG 482
F +G G G LG G R S S P++V + CG+ ++ I+ V G+ GSN
Sbjct: 465 FAWGRGDSGRLGLGTRESHSCPQQVPMPPGQEAQRVVCGI-DSSMILTVPGQALACGSNR 523
Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRV-------VPLCVKVSDDISFCKVACGHSITIALT 535
+ L G E + H E + PL D + G + + A+T
Sbjct: 524 FNKLGLDHLSLGEE-PVPHQQVEEALSFTLLGSAPL-----DQEPLLSIDLGTAHSAAVT 577
Query: 536 ATGQVFSMGSADYGQLGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
A+G ++ GS +GQLG+ G + P +++G ++ + +ACG + ++SEVY+
Sbjct: 578 ASGDCYTFGSNQHGQLGTNTRRGSRAPCKVQG-LEGIKMAMVACGDAFTVAIGAESEVYS 636
Query: 595 WGKGANGQLGHGDNE-NKQTPTLVEALRDKQVKSVVC 630
WGKGA G+LG D + P ++ V SV C
Sbjct: 637 WGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSC 673
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 154/350 (44%), Gaps = 23/350 (6%)
Query: 253 GDVFIW-----GEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKH 307
G + +W G G G LL GAV + + + LE + + +ACG
Sbjct: 351 GRLILWEAPPLGAG-GGSLLPGAVE-------QPQPQFISRFLEGQSGVTIKHVACGDFF 402
Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG 367
+T +G I ++G GS G LGHG D+S P +++AL G + VACG H A++
Sbjct: 403 TACLTDRGIIMTFGSGSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTER 462
Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTF 427
+L+ WG G + G LG + SH P++V G + + CG + +T G+
Sbjct: 463 ELFAWGRG--DSGRLGLGTRESHSCPQQVP-MPPGQEAQRVVCGIDSSMILTVPGQALAC 519
Query: 428 GDGTFGALG--HGDRSSTSVP-REVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
G F LG H VP ++VE T++ S + + G + +
Sbjct: 520 GSNRFNKLGLDHLSLGEEPVPHQQVEEALSF-TLLGSAPLDQEPLLSIDLGTAHSAAVTA 578
Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
S +T+G GQLG P V+ + I VACG + T+A+ A +V+S G
Sbjct: 579 SGDCYTFGSNQHGQLGTNTRRGSRAPCKVQGLEGIKMAMVACGDAFTVAIGAESEVYSWG 638
Query: 545 SADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIAC--GSYHIAVVSSKSE 591
G+LG P ++ + H Y + ++C G+ +AV S E
Sbjct: 639 KGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSCCHGNTLLAVRSVTDE 688
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 142/295 (48%), Gaps = 21/295 (7%)
Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF-HTCAVTLS 366
+ T +IF G G LG G P+ +D+L G I ++ G H T
Sbjct: 58 VLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTD 117
Query: 367 GDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
G+++TWG HN LG + +P +S + Q+ + CG +H+ +TS G++F
Sbjct: 118 GEVFTWG---HNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVF 174
Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMA-SCGVWHTAAIVEVAGKTSGSNGLS 484
+G G +G G ++ +PR V + K VM+ +CG + A+V+
Sbjct: 175 AWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVD------------ 222
Query: 485 SKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
+ +++ WG GQLG G + + P V I +VACG++ T+ LT GQ+++ G
Sbjct: 223 TGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWG 282
Query: 545 SADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSK-SEVYTWGK 597
+ YGQLG+ + + +PT + K R IE AC S H + S+ VY WG+
Sbjct: 283 ANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACHSAHTSAAKSQGGHVYMWGQ 336
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 109/221 (49%), Gaps = 19/221 (8%)
Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
++F G G LG GD ST PR +++L K S G + G+
Sbjct: 66 EIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGE------ 119
Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS---FCKVACGHSITIALTATGQ 539
+FTWG A QLG+G +VP +S ++S +VACG ++ LT+ G+
Sbjct: 120 -----VFTWGHNAYSQLGNGTTNHGLVP--CHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 540 VFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
VF+ G + GQ+GS GST P R+ G ++++ + IACG V EVY WG
Sbjct: 173 VFAWGYNNSGQVGS-GSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGY 231
Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
NGQLG G + N+ TP V AL+ +V+ V CG T +
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 160/336 (47%), Gaps = 40/336 (11%)
Query: 323 GSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFH----TCAVTLSGD--LYT-WGDG 375
G G+ G V+A +S K++D + + E C +G+ LYT D
Sbjct: 7 GFYGESGKSVQATLSSLKMLDVGKWPIFSLCSEEELQLIRQACVFGTAGNEVLYTTVNDE 66
Query: 376 IHNLG-----LLGQVSEISHWI-PRKVSGQMEGLQISSICCGPW-HTAAITSAGKLFTFG 428
I LG LG V +I I PR++ + G +I+S+ G H T+ G++FT+G
Sbjct: 67 IFVLGTNCSGCLG-VGDIQSTIEPRRLD-SLTGKKIASLSYGSGPHIVLATTDGEVFTWG 124
Query: 429 DGTFGALGHGDRSSTSVPREVET-LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
+ LG+G + VP + T L + + +CG +H+ + S +
Sbjct: 125 HNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGE 172
Query: 488 LFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
+F WG GQ+G G PR V C++ +S +ACG ++A+ TG+V+
Sbjct: 173 VFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMS---IACGQMCSMAVVDTGEVYVW 229
Query: 544 GSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
G GQLG GS+G PT R+ ++ ++ +ACG H V++ + ++Y WG + G
Sbjct: 230 GYNGNGQLGL-GSSGNQPTPCRVAA-LQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYG 287
Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
QLG G+ N+ PT V +D+ ++ C S T+A
Sbjct: 288 QLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSA 323
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 127/269 (47%), Gaps = 19/269 (7%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGS-KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY 338
D + + P+ L+S S++ GS H VL T G++F+WG + +LG+G
Sbjct: 82 DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLV 141
Query: 339 PKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
P I L+ + VACG +H+ +T G+++ WG +N G +G S + IPR+V+
Sbjct: 142 PCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG--YNNSGQVGSGSTANQPIPRRVT 199
Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
G ++ + SI CG + A+ G+++ +G G LG G + P V L+ ++
Sbjct: 200 GCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRV 259
Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
+CG HT + + +++ WG + GQLG G+ + P V V
Sbjct: 260 QRVACGYAHTLVLTD------------EGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK 307
Query: 518 DISFCKVACGHS--ITIALTATGQVFSMG 544
D ++A HS + A + G V+ G
Sbjct: 308 D-RIIEIAACHSAHTSAAKSQGGHVYMWG 335
Score = 66.6 bits (161), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 80/174 (45%), Gaps = 20/174 (11%)
Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK----VLESTVVLDAQSIACGSKHA 308
G+VF WG N ++ S + +P+ L++ VV+ SIACG +
Sbjct: 171 GEVFAWGYN----------NSGQVGSGSTANQPIPRRVTGCLQNKVVM---SIACGQMCS 217
Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
+ V G+++ WG G+LG G + P + AL G + VACG HT +T G
Sbjct: 218 MAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
+Y W G ++ G LG ++ + P V + + + I C HT+A S G
Sbjct: 278 IYAW--GANSYGQLGTGNKSNQSYPTPVVVEKDRI-IEIAACHSAHTSAAKSQG 328
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 122 bits (307), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 160/336 (47%), Gaps = 49/336 (14%)
Query: 305 SKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVT 364
+ H++L+T +G+++SWG G+LGHG V P+LI+AL+ I + ACG HT A+T
Sbjct: 157 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALT 216
Query: 365 LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
+G ++ +G+ + +G LG + + +P G I+ + CG + + G L
Sbjct: 217 DTGSVFAFGE--NKMGQLG-LGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNL 273
Query: 425 FTFGDGTFGALGHG------------DRSSTSVPREVETLKE---------LKTVM---A 460
++FG +G LGH + VPR V E + V+
Sbjct: 274 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 333
Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD--D 518
+CG HT + S K++F+WG G G+LGH + + +VP VK+ D
Sbjct: 334 ACGANHTLVLD------------SQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPG 381
Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIAC 578
++ G++ + A++ G +F G+ + + + +P ++ R I +AC
Sbjct: 382 RGATQIYAGYTCSFAVSEVGGLFFWGATNTSR-----ESTMYPKAVQDLCGWR-IRSLAC 435
Query: 579 GSYHIAVVSSKSEVYTWGKGAN-GQLGHGDNENKQT 613
G I V + +S + +WG G+LG+GD++ K +
Sbjct: 436 GKSSIIVAADESTI-SWGPSPTFGELGYGDHKPKSS 470
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 103/247 (41%), Gaps = 35/247 (14%)
Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
G+L FG + +G + VP++ + L + + + V V SGS
Sbjct: 102 GQLLIFGATNWDLIGRKE-----VPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSC 156
Query: 482 GLSS------KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
S KL++WG +GQLGHGD + P ++ + ACG + T+ALT
Sbjct: 157 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALT 216
Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
TG VF+ G GQLG T P+ + + I +ACG+ ++ K +Y++
Sbjct: 217 DTGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSF 276
Query: 596 GKGANGQLGHGDNEN----------------KQTPTLVEALRDKQ--------VKSVVCG 631
G GQLGH + ++ +E +D Q V+ V CG
Sbjct: 277 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 336
Query: 632 SNFTAAI 638
+N T +
Sbjct: 337 ANHTLVL 343
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 139/342 (40%), Gaps = 51/342 (14%)
Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
++ D + P+++E+ ACG H + +T G +F++GE G+LG G +
Sbjct: 179 QLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSVFAFGENKMGQLGLGNQT 238
Query: 335 D-VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEIS---- 389
D V P I NG I +ACG + + G+LY++ G G LG S+
Sbjct: 239 DAVPSPAQI-MYNGQPITKMACGAEFSMLMDCKGNLYSF--GCPEYGQLGHNSDGKFIAR 295
Query: 390 --------HWIPRKVS--------GQM---EGLQISSICCGPWHTAAITSAGKLFTFGDG 430
+PR+V+ GQ+ + + + CG HT + S ++F++G G
Sbjct: 296 AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFG 355
Query: 431 TFGALGHGDRSSTSVPREVET--LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL 488
+G LGH ++ VPR V+ G + A+ EV G L
Sbjct: 356 GYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYTCSFAVSEVGG------------L 403
Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG-SAD 547
F WG + E + P V+ +ACG S +I + A S G S
Sbjct: 404 FFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGKS-SIIVAADESTISWGPSPT 456
Query: 548 YGQLGSPGSTGKFPTRIE--GNIKHRYIEDIACGSYHIAVVS 587
+G+LG K T + + + E +A G H V++
Sbjct: 457 FGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIA 498
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 148/314 (47%), Gaps = 23/314 (7%)
Query: 291 ESTVVLDAQSIACGS--KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS 348
E + L Q+ GS + T +IF G G LG G P+ +D+L G
Sbjct: 39 EEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGK 98
Query: 349 NIHMVACGEF-HTCAVTLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQIS 406
I ++ G H T G+++TWG HN LG + +P +S + Q+
Sbjct: 99 KIASLSYGSGPHIVLATTDGEVFTWG---HNAYSQLGNGTTNHGLVPCHISTNLSNKQVI 155
Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVW 465
+ CG +H+ +TS G++F +G G +G G ++ +PR V + K VM +CG
Sbjct: 156 EVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQM 215
Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
+ A+V+ + +++ WG GQLG G + + P V I +VA
Sbjct: 216 CSMAVVD------------TGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVA 263
Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIA 584
CG++ T+ LT GQ+++ G+ YGQLG+ + + +PT + K R IE AC S H +
Sbjct: 264 CGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPVVVE-KDRIIEIAACHSAHTS 322
Query: 585 VVSSK-SEVYTWGK 597
++ VY WG+
Sbjct: 323 AAKTQGGHVYMWGQ 336
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 110/221 (49%), Gaps = 19/221 (8%)
Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
++F G G LG GD ST PR +++L K S G + G+
Sbjct: 66 EIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGE------ 119
Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDIS---FCKVACGHSITIALTATGQ 539
+FTWG A QLG+G +VP +S ++S +VACG ++ LT+ G+
Sbjct: 120 -----VFTWGHNAYSQLGNGTTNHGLVP--CHISTNLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 540 VFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGK 597
VF+ G + GQ+GS GST P R+ G ++++ + +IACG V EVY WG
Sbjct: 173 VFAWGYNNSGQVGS-GSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGY 231
Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
NGQLG G + N+ TP V AL+ +V+ V CG T +
Sbjct: 232 NGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVL 272
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 127/269 (47%), Gaps = 19/269 (7%)
Query: 280 DRRDALLPKVLESTVVLDAQSIACGS-KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSY 338
D + + P+ L+S S++ GS H VL T G++F+WG + +LG+G
Sbjct: 82 DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLV 141
Query: 339 PKLIDA-LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVS 397
P I L+ + VACG +H+ +T G+++ WG +N G +G S + IPR+V+
Sbjct: 142 PCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWG--YNNSGQVGSGSTANQPIPRRVT 199
Query: 398 GQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKT 457
G ++ + +I CG + A+ G+++ +G G LG G + P V L+ ++
Sbjct: 200 GCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRV 259
Query: 458 VMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD 517
+CG HT + + +++ WG + GQLG G+ + P V V
Sbjct: 260 QRVACGYAHTLVLTD------------EGQIYAWGANSYGQLGTGNKSNQSYPTPVVVEK 307
Query: 518 DISFCKVACGHS--ITIALTATGQVFSMG 544
D ++A HS + A T G V+ G
Sbjct: 308 D-RIIEIAACHSAHTSAAKTQGGHVYMWG 335
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 133/267 (49%), Gaps = 28/267 (10%)
Query: 380 GLLGQVSEISHWI-PRKVSGQMEGLQISSICCGPW-HTAAITSAGKLFTFGDGTFGALGH 437
G LG V +I I PR++ + G +I+S+ G H T+ G++FT+G + LG+
Sbjct: 76 GCLG-VGDIQSTIEPRRLD-SLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAYSQLGN 133
Query: 438 GDRSSTSVPREVET-LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAE 496
G + VP + T L + + +CG +H+ + S ++F WG
Sbjct: 134 GTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLT------------SDGEVFAWGYNNS 181
Query: 497 GQLGHGDAE----PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
GQ+G G PR V C++ + +ACG ++A+ TG+V+ G GQLG
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQ---NKVVMNIACGQMCSMAVVDTGEVYVWGYNGNGQLG 238
Query: 553 SPGSTGKFPT--RIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
GS+G PT R+ ++ ++ +ACG H V++ + ++Y WG + GQLG G+ N
Sbjct: 239 -LGSSGNQPTPCRVAA-LQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSN 296
Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAA 637
+ PT V +D+ ++ C S T+A
Sbjct: 297 QSYPTPVVVEKDRIIEIAACHSAHTSA 323
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPK----VLESTVVLDAQSIACGSKHA 308
G+VF WG N ++ S + +P+ L++ VV++ IACG +
Sbjct: 171 GEVFAWGYN----------NSGQVGSGSTANQPIPRRVTGCLQNKVVMN---IACGQMCS 217
Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
+ V G+++ WG G+LG G + P + AL G + VACG HT +T G
Sbjct: 218 MAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQ 277
Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
+Y W G ++ G LG ++ + P V + + + + C +AA T G ++ +G
Sbjct: 278 IYAW--GANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKTQGGHVYMWG 335
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 176/362 (48%), Gaps = 29/362 (8%)
Query: 296 LDAQSIACGS--KHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMV 353
+ +S+A GS H++L+T +G+++SWG G+LGHG + PKLI++L G
Sbjct: 139 VQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHA 198
Query: 354 ACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPW 413
ACG HT A+T +G +Y +G+ + +G LG + + +P G I+ + CG
Sbjct: 199 ACGRNHTLALTENGSVYAFGE--NKMGQLG-LGNKTDAVPSPAQILYNGQPITKVACGAE 255
Query: 414 HTAAITSAGKLFTFGDGTFGALGHG-DRSSTSVPREVETLKELKTVMASCGVWHT----- 467
+ + G L++FG +G LGH D + + +E EL + + T
Sbjct: 256 FSMIMDCKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKDGQI 315
Query: 468 -----AAIVEVAGKTSGSNGLSS-KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD--DI 519
+ ++A + S L S K++F+WG G G+LGH + +VP VK+ D
Sbjct: 316 LPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGR 375
Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACG 579
++ G + + A++ G +F G+ + + + +P ++ ++ + +ACG
Sbjct: 376 GAAQIYAGATCSFAVSEMGGLFFWGATNTSR-----DSTMYPKAVQ-DLCGWKVRSLACG 429
Query: 580 SYHIAVVSSKSEVYTWGKGAN-GQLGHGDNENKQTPTL--VEALRDKQVKSVVCGSNFTA 636
I V + +S + +WG G+LG+GDN+ K + T V+ L V+ G++ T
Sbjct: 430 KSSIIVAADESTI-SWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQVIMGNSHTL 488
Query: 637 AI 638
+
Sbjct: 489 VV 490
Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 86/190 (45%), Gaps = 11/190 (5%)
Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
G+L FG + +G + VP++ + L + + V+V SGS
Sbjct: 95 GQLLIFGATNWDLIGRKE-----VPKQQAAYRNLGQNLWGPHRYGCLTGVQVRSVASGSC 149
Query: 482 GLSS------KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
S KL++WG +GQLGHGD + VP ++ F ACG + T+ALT
Sbjct: 150 AAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHAACGRNHTLALT 209
Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
G V++ G GQLG T P+ + + I +ACG+ ++ K +Y++
Sbjct: 210 ENGSVYAFGENKMGQLGLGNKTDAVPSPAQILYNGQPITKVACGAEFSMIMDCKGNLYSF 269
Query: 596 GKGANGQLGH 605
G GQLGH
Sbjct: 270 GCPEYGQLGH 279
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 158/336 (47%), Gaps = 49/336 (14%)
Query: 305 SKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVT 364
+ H++L+T +G+++SWG G+LGHG V P+LI+ L+ I ACG HT A+T
Sbjct: 159 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALT 218
Query: 365 LSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKL 424
+G ++ +G+ + +G LG + + +P G I+ + CG + + G L
Sbjct: 219 ETGSVFAFGE--NKMGQLG-LGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNL 275
Query: 425 FTFGDGTFGALGHG------------DRSSTSVPREVETLKE---------LKTVM---A 460
++FG +G LGH + VPR V E + V+
Sbjct: 276 YSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 335
Query: 461 SCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSD--D 518
+CG HT + S K++F+WG G G+LGH + + +VP VK+ D
Sbjct: 336 ACGANHTLVLD------------SQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPG 383
Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIAC 578
++ G++ + A++ G +F G+ + + + +P ++ R I +AC
Sbjct: 384 RGASQIYAGYTCSFAVSEVGGLFFWGATNTSR-----ESTMYPKAVQDLCGWR-IRSLAC 437
Query: 579 GSYHIAVVSSKSEVYTWGKGAN-GQLGHGDNENKQT 613
G I V + +S + +WG G+LG+GD++ K +
Sbjct: 438 GKSSIIVAADESTI-SWGPSPTFGELGYGDHKPKSS 472
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 102/247 (41%), Gaps = 35/247 (14%)
Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
G+L FG + +G + VP++ + L + + A V V SGS
Sbjct: 104 GQLLIFGATNWDLIGRKE-----VPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSC 158
Query: 482 GLSS------KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
S KL++WG +GQLGHGD + P ++ ACG + T+ALT
Sbjct: 159 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALT 218
Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
TG VF+ G GQLG T P+ + + I +ACG+ ++ K +Y++
Sbjct: 219 ETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMDCKGNLYSF 278
Query: 596 GKGANGQLGHGDNEN----------------KQTPTLVEALRDKQ--------VKSVVCG 631
G GQLGH + ++ +E +D Q V+ V CG
Sbjct: 279 GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 338
Query: 632 SNFTAAI 638
+N T +
Sbjct: 339 ANHTLVL 345
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 131/306 (42%), Gaps = 51/306 (16%)
Query: 275 EISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
++ D + P+++E S ACG H + +T+ G +F++GE G+LG G +
Sbjct: 181 QLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQT 240
Query: 335 D-VSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEIS---- 389
D V P I NG I +ACG + + G+LY++ G G LG S+
Sbjct: 241 DAVPSPAQI-MYNGQPITKMACGAEFSMIMDCKGNLYSF--GCPEYGQLGHNSDGKFIAR 297
Query: 390 --------HWIPRKVS--------GQM---EGLQISSICCGPWHTAAITSAGKLFTFGDG 430
+PR+V+ GQ+ + + + CG HT + S ++F++G G
Sbjct: 298 AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFG 357
Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMAS---CGVWHTAAIVEVAGKTSGSNGLSSKK 487
+G LGH ++ VPR V+ L + AS G + A+ EV G
Sbjct: 358 GYGRLGHAEQKDEMVPRLVK-LFDFPGRGASQIYAGYTCSFAVSEVGG------------ 404
Query: 488 LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMG-SA 546
LF WG + E + P V+ +ACG S +I + A S G S
Sbjct: 405 LFFWG------ATNTSRESTMYPKAVQDLCGWRIRSLACGKS-SIIVAADESTISWGPSP 457
Query: 547 DYGQLG 552
+G+LG
Sbjct: 458 TFGELG 463
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 24/193 (12%)
Query: 285 LLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA 344
+LP + + VV D +ACG+ H +++ Q ++FSWG G G+LGH + D P+L+
Sbjct: 324 ILP--VPNVVVRD---VACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKL 378
Query: 345 LN--GSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG 402
+ G + G + AV+ G L+ WG S S P+ V + G
Sbjct: 379 FDFPGRGASQIYAGYTCSFAVSEVGGLFFWG--------ATNTSRESTMYPKAVQ-DLCG 429
Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDG---TFGALGHGDR--SSTSVPREVETLKELKT 457
+I S+ CG ++I A T G TFG LG+GD S++ +EV+TL + +
Sbjct: 430 WRIRSLACG---KSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFS 486
Query: 458 VMASCGVWHTAAI 470
+ G H+ I
Sbjct: 487 EQVAMGYSHSLVI 499
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 140/299 (46%), Gaps = 23/299 (7%)
Query: 305 SKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF-HTCAV 363
+ A+ VT ++F +G LG G PK ++AL G I ++ G H
Sbjct: 31 ANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLT 90
Query: 364 TLSGDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
T G +Y WG HN LG + P +V + Q+ + CG H+ A+ + G
Sbjct: 91 TEDGVVYAWG---HNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALAADG 147
Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVA-GKTSGSN 481
+LF +G G +G G ++ PR+V HT +V +A G+TS
Sbjct: 148 ELFAWGYNNCGQVGSGSTANQPTPRKVTN------------CLHTKRVVNIACGQTSSMA 195
Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
L S +++ WG GQLG G+ ++ P+ V + ++ CG++ T+ALT G ++
Sbjct: 196 VLDSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLY 255
Query: 542 SMGSADYGQLGSPGSTGKF--PTRIEGNIKHRYIEDIACGSYHIAVVSSK-SEVYTWGK 597
+ G+ YGQLG+ GS PT+I K R IE AC S H + ++ VY WG+
Sbjct: 256 AWGANTYGQLGT-GSKNNLLSPTQIMVE-KERVIEIAACHSTHTSAAKTQGGHVYMWGQ 312
Score = 106 bits (265), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 113/226 (50%), Gaps = 19/226 (8%)
Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL--KELKTVMASCGVWHTAAIVEVAG 475
+T ++F FG LG GD ST VP+++E L K++K++ G H E
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGP-HVLLTTE--- 92
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI-SFCKVACGHSITIAL 534
+G+ ++ WG QLG+G + P+ V + I +VACG ++AL
Sbjct: 93 -----DGV----VYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMAL 143
Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
A G++F+ G + GQ+GS GST PT ++ + + + +IACG V EV
Sbjct: 144 AADGELFAWGYNNCGQVGS-GSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEV 202
Query: 593 YTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
Y WG NGQLG G+N N+ TP V AL V +VCG T A+
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHGMCVNQIVCGYAHTLAL 248
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 137/276 (49%), Gaps = 40/276 (14%)
Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
G V+ WG LGNG + V++ + + L+ +V+E +ACGS H+
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT----NLLIKQVIE---------VACGSHHS 140
Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYP-KLIDALNGSNIHMVACGEFHTCAVTLSG 367
+ + G++F+WG + G++G G A+ P K+ + L+ + +ACG+ + AV SG
Sbjct: 141 MALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSG 200
Query: 368 DLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
++Y WG +G LGL ++++ P +V+ + G+ ++ I CG HT A+T G L+
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLT---PVRVAA-LHGMCVNQIVCGYAHTLALTDEGLLYA 256
Query: 427 FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
+G T+G LG G +++ P ++ KE +A+C HT+ A KT G +
Sbjct: 257 WGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTS-----AAKTQGGH----- 306
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFC 522
++ WG G P + C +DD+ C
Sbjct: 307 -VYMWGQCR----GQSVILPHLTHFC--CTDDVFAC 335
Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 128/283 (45%), Gaps = 28/283 (9%)
Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC--CGPWHTAAITS 420
VT + +++ +G N LG S +P+K+ + G +I S+ GP H T
Sbjct: 37 VTDNDEVFVFGLNYSNC--LGTGDNQSTLVPKKLEA-LCGKKIKSLSYGSGP-HVLLTTE 92
Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTAAIVEVAGKTSG 479
G ++ +G + LG+G + P +V T +K V+ +CG H+ A+
Sbjct: 93 DGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHHSMALA-------- 144
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVACGHSITIALT 535
+ +LF WG GQ+G G PR V C+ ++ +ACG + ++A+
Sbjct: 145 ----ADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVN---IACGQTSSMAVL 197
Query: 536 ATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
+G+V+ G GQLG + + P R+ + + I CG H ++ + +Y
Sbjct: 198 DSGEVYGWGYNGNGQLGLGNNGNQLTPVRVAA-LHGMCVNQIVCGYAHTLALTDEGLLYA 256
Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
WG GQLG G N +PT + +++ ++ C S T+A
Sbjct: 257 WGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSA 299
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 586 VSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVS 645
V+ EV+ +G + LG GDN++ P +EAL K++KS+ GS + GV
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGPHVLLTTEDGVV 96
Query: 646 IA 647
A
Sbjct: 97 YA 98
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 152/321 (47%), Gaps = 15/321 (4%)
Query: 261 GLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSW 320
G G L GAV ++ + + LE + +S++CG +T +G I ++
Sbjct: 370 GSGEPTLPGAVEQMQ-------PQFISRFLEGQSGVTIKSVSCGDLFTTCLTDRGIIMTF 422
Query: 321 GEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLG 380
G GS G LGHG DV+ PK+++AL G + V+CG H AVT ++++WG G + G
Sbjct: 423 GSGSNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRG--DNG 480
Query: 381 LLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR 440
LG ++ SH P++VS + + + CG + +++ ++ G+ F LG
Sbjct: 481 RLGLATQDSHNCPQQVSLPAD-FEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKV 539
Query: 441 SSTSVPREVETLKELKTV-MASCGVWHTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQ 498
S T P ++E+ + +T IV + T+ S ++ K + FT+G GQ
Sbjct: 540 SGTEEPSSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSVAVTEKGQCFTFGSNQHGQ 599
Query: 499 LGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG 558
LG VP +VS ACG + T+A+ A G+V++ G G+LG
Sbjct: 600 LGCSHRRSSRVP--YQVSGLQGITMAACGDAFTLAIGAEGEVYTWGKGARGRLGRKEEDF 657
Query: 559 KFPTRIEGNIKHRY-IEDIAC 578
P ++ + H + + +AC
Sbjct: 658 GIPKPVQLDESHAFTVTSVAC 678
Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 155/378 (41%), Gaps = 85/378 (22%)
Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW---- 372
+++WG G +S P + LN I V+ G VT SG L TW
Sbjct: 322 VYTWGSG------------ISTPLRLPMLNTEVIQ-VSLGRTQKMGVTKSGRLITWEAPS 368
Query: 373 -GDGIHNLGLLGQVSEIS-HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
G G L G V ++ +I R + GQ G+ I S+ CG T +T G + TFG G
Sbjct: 369 VGSGEPTLP--GAVEQMQPQFISRFLEGQ-SGVTIKSVSCGDLFTTCLTDRGIIMTFGSG 425
Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIV---EVAGKTSGSN---GLS 484
+ G LGHG+ + + P+ VE L + V SCG H A+ EV G N GL+
Sbjct: 426 SNGCLGHGNFNDVTQPKIVEALLGYELVQVSCGASHVLAVTNEREVFSWGRGDNGRLGLA 485
Query: 485 SK----------------------------------KLFTWGDGAEGQLG----HGDAEP 506
++ ++ G+ +LG G EP
Sbjct: 486 TQDSHNCPQQVSLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEP 545
Query: 507 ------------RVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-S 553
++V ++ I + + HS+ A+T GQ F+ GS +GQLG S
Sbjct: 546 SSFCQVEEVHLFQLVQSAPLNTEKIVYIDIGTAHSV--AVTEKGQCFTFGSNQHGQLGCS 603
Query: 554 PGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE-NKQ 612
+ + P ++ G + I ACG + ++ EVYTWGKGA G+LG + +
Sbjct: 604 HRRSSRVPYQVSG---LQGITMAACGDAFTLAIGAEGEVYTWGKGARGRLGRKEEDFGIP 660
Query: 613 TPTLVEALRDKQVKSVVC 630
P ++ V SV C
Sbjct: 661 KPVQLDESHAFTVTSVAC 678
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 464 VWHTAAIVEVAGKTSGSNGLSSKKLFTW-----GDGAEGQLGHGD-AEPRVVPLCVKVSD 517
+ +T I G+T S +L TW G G G + +P+ + ++
Sbjct: 337 MLNTEVIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFISRFLEGQS 396
Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-----PTRIEGNIKHRY 572
++ V+CG T LT G + + GS G LG G F P +E + +
Sbjct: 397 GVTIKSVSCGDLFTTCLTDRGIIMTFGSGSNGCLGH----GNFNDVTQPKIVEALLGYEL 452
Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
++ ++CG+ H+ V+++ EV++WG+G NG+LG ++ P V D + + V+CG
Sbjct: 453 VQ-VSCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCPQQVSLPADFEAQRVLCGV 511
Query: 633 NFTAAICLHKGVSIADHSICSGCRNQFN 660
+ + + H I + N+FN
Sbjct: 512 DCSMIMS-------TQHQILACGNNRFN 532
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 184/432 (42%), Gaps = 89/432 (20%)
Query: 246 HEDFDGLGD---VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIA 302
HED D L + IWG G+ N N I ++ + + +VL I+
Sbjct: 149 HEDKDELESDHYITIWGNGIRNY---KNCNMSSIGFSEMYN-------QQKIVL----IS 194
Query: 303 CGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS---NIHMVACGEFH 359
G+ H+ +T QG ++++G+G GKLGHG S PKL++ + +A G H
Sbjct: 195 TGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGGKH 254
Query: 360 TCAVTLSGDLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQM------------------ 400
+ A+T+ G +Y+WG + LGL S + +P+ ++ +
Sbjct: 255 SLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNNNNSTNNNN 314
Query: 401 ---------------------EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGD 439
++I + CG +A IT G LFTFG G G LG G+
Sbjct: 315 NNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGLGE 374
Query: 440 RS--STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEG 497
+S S P+ V++L+ + S G H+ + + GL +F++G +G
Sbjct: 375 QSLLMQSTPKLVQSLQGHFIIDMSSGGGHSLVLT--------NKGL----VFSFGRNDQG 422
Query: 498 QLGHG-DAEPRVVPLCVKVSDD--------ISFCKVACGHSITIALTATGQVFSMGSADY 548
QLG G + + +P ++ I+ KV+ G +IA++ ++ G +DY
Sbjct: 423 QLGIGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDNNDTYAWGRSDY 482
Query: 549 GQLGSPGSTG---KFPTRIEGN---IKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQ 602
G LG+ P I N + + D++ G H +S +Y+WG A +
Sbjct: 483 GVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQR 542
Query: 603 LGHGDNENKQTP 614
LG +EN+ TP
Sbjct: 543 LGFKSDENQLTP 554
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 29/250 (11%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADV--SYPKLIDALNGSNIHMVACGEF 358
++CG+ + ++T +G +F++G G G+LG G ++ + S PKL+ +L G I ++ G
Sbjct: 343 LSCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGG 402
Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEG-------LQISSICCG 411
H+ +T G ++++G +G S IP+++ + I + G
Sbjct: 403 HSLVLTNKGLVFSFGRNDQGQLGIGCFSN-QQTIPKQIQWFQTSQQQQQQPINIIKVSAG 461
Query: 412 PWHTAAITSAGKLFTFGDGTFGALG-----HGDRS-STSVPREVETLKELKTVMASCGVW 465
+H+ AI+ + +G +G LG GDR+ + + +K + S G
Sbjct: 462 GYHSIAISDNNDTYAWGRSDYGVLGTSIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQ 521
Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP-LCVKVSDDISFCKV 524
H VA GS L++WG A +LG E ++ P C S D
Sbjct: 522 HN-----VAMSIDGS-------LYSWGCNAGQRLGFKSDENQLTPKKCFINSKDSKPLLF 569
Query: 525 ACGHSITIAL 534
CG ITI +
Sbjct: 570 TCGEIITIIV 579
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 153/366 (41%), Gaps = 85/366 (23%)
Query: 241 SQGSCHEDF-DGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQ 299
S G+ H F G+++ +G+GL L G +E S+ + L + ++ L
Sbjct: 194 STGAIHSSFITDQGNLYTFGDGLLGKLGHG---NLESYSSPK----LVEFFQTKPSLRVV 246
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG---VEADVSYPKLID------------- 343
SIA G KH++ +T G+++SWG +LG G + S P+LI+
Sbjct: 247 SIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNISYNNNNNNNN 306
Query: 344 ----------ALNGS-----------------NIHMVACGEFHTCAVTLSGDLYTWGDGI 376
+G+ I ++CG + +T G L+T+G G
Sbjct: 307 NNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDKGLLFTFGRGD 366
Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALG 436
H LG+ S + P+ V ++G I + G H+ +T+ G +F+FG G LG
Sbjct: 367 HGRLGLGEQSLLMQSTPKLVQS-LQGHFIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLG 425
Query: 437 HGDRSS-TSVPREVETLKE--------LKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKK 487
G S+ ++P++++ + + + S G +H+ AI + +
Sbjct: 426 IGCFSNQQTIPKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISD------------NND 473
Query: 488 LFTWGDGAEGQLG-----HGDAEPRVVPLCVK----VSDDISFCKVACGHSITIALTATG 538
+ WG G LG GD R +P+ + V D++ F V+ G +A++ G
Sbjct: 474 TYAWGRSDYGVLGTSIDVQGD---RNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDG 530
Query: 539 QVFSMG 544
++S G
Sbjct: 531 SLYSWG 536
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 576 IACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSN 633
I+ G+ H + ++ + +YT+G G G+LGHG+ E+ +P LVE + K VV +N
Sbjct: 193 ISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIAN 250
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 144/352 (40%), Gaps = 49/352 (13%)
Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGS-NIHMVACGEFHTCAVTLS 366
AV+ ++ +++ WG GGK + P+ +D G V G+ H VT+
Sbjct: 322 AVVTSRSSEVYVWG---GGK---------TTPQKLDVFKGGWRARQVCAGDAHFAVVTVE 369
Query: 367 GDLYTW-----GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
+LYTW G +H G LG S+ P+ V +++G + + CG T IT
Sbjct: 370 KELYTWVNMQGGSKLH--GQLGHGDRASYRQPKHVE-KLQGKSVQKVSCGSDFTVCITDE 426
Query: 422 GKLFTFGDGTFGALGHGDRSSTSV--PREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
G+L++FG +G LG + + V P V+ SCG H A+
Sbjct: 427 GQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTR------- 479
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
SK +++WG G G+LG + P V+V + V CG + LT TG+
Sbjct: 480 -----SKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGSDGSFLLTLTGK 534
Query: 540 VFSMGSADYGQLGSPGSTGKFPTR-------------IEGNIKHRYIEDIACGSYHIAVV 586
V + G ++ +LG T + + I I+ G H A +
Sbjct: 535 VLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAI 594
Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA-LRDKQVKSVVCGSNFTAA 637
+ + T+G GQLG GD L+ L KQV V CG FT A
Sbjct: 595 DERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTA 646
Score = 106 bits (264), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 153/360 (42%), Gaps = 46/360 (12%)
Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
+++ W G L G ++ DR PK +E Q ++CGS V +T
Sbjct: 371 ELYTWVNMQGGSKLHG-----QLGHGDRASYRQPKHVEKLQGKSVQKVSCGSDFTVCITD 425
Query: 314 QGQIFSWGEGSGGKLGHGVEA--DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
+GQ++S+G G LG A +V P L+D + V+CG+ H A+T S +Y+
Sbjct: 426 EGQLYSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCGDSHIMALTRSKSVYS 485
Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
WG G G LG SE + P+KV Q GL I ++CCG + +T GK+ G
Sbjct: 486 WGCG--EYGRLGLDSEDDVYSPQKVEVQ-RGLCIVNVCCGSDGSFLLTLTGKVLACGLNE 542
Query: 432 FGALGHGDRSSTSVPRE-------------VETLKELKTVMASCGVWHTAAIVEVAGKTS 478
LG ++ + E + L K S G HTAAI E
Sbjct: 543 HNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERG---- 598
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTAT 537
+L T+G GQLG GD + + L +V+CG T A TA
Sbjct: 599 --------RLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTAATAD 650
Query: 538 GQVFSMGSADYGQLG-SPGSTGK-------FPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
+F+ G+ G+L +P + +P I G++ H + D++C +H ++ K
Sbjct: 651 NHIFAWGNGGNGRLAMTPNERPQGSDICTSWPRPIFGSLHH--VTDLSCRGWHTILIVEK 708
Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 141/325 (43%), Gaps = 14/325 (4%)
Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGG-----KLGHGVEADVSYPKLIDALNGSNIHM 352
A+ + G H +VT + ++++W GG +LGHG A PK ++ L G ++
Sbjct: 353 ARQVCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQK 412
Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLG-QVSEISHWIPRKVSGQMEGLQISSICCG 411
V+CG T +T G LY++G + G LG S S + + + + CG
Sbjct: 413 VSCGSDFTVCITDEGQLYSFGSDYY--GCLGVNQSAGSEVLEPLLVDFFLNEPVDQVSCG 470
Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIV 471
H A+T + ++++G G +G LG P++VE + L V CG + ++
Sbjct: 471 DSHIMALTRSKSVYSWGCGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVCCGS-DGSFLL 529
Query: 472 EVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK---VACGH 528
+ GK GL+ G + H + + ++ +SF K ++ G
Sbjct: 530 TLTGKVLAC-GLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTLAKQLSFYKIRSISPGR 588
Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGN-IKHRYIEDIACGSYHIAVVS 587
+ T A+ G++ + GS GQLG + G + + + ++CG +
Sbjct: 589 THTAAIDERGRLLTFGSNKCGQLGVGDYRKHLGINLLGGPLGGKQVIRVSCGDEFTTAAT 648
Query: 588 SKSEVYTWGKGANGQLGHGDNENKQ 612
+ + ++ WG G NG+L NE Q
Sbjct: 649 ADNHIFAWGNGGNGRLAMTPNERPQ 673
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 576 IACGSYHIAVVSSKSEVYTW-----GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
+ G H AVV+ + E+YTW G +GQLGHGD + + P VE L+ K V+ V C
Sbjct: 356 VCAGDAHFAVVTVEKELYTWVNMQGGSKLHGQLGHGDRASYRQPKHVEKLQGKSVQKVSC 415
Query: 631 GSNFTAAI 638
GS+FT I
Sbjct: 416 GSDFTVCI 423
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 156/360 (43%), Gaps = 43/360 (11%)
Query: 253 GDVFIW-GEGLGNG---LLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
G + +W LG G LL GAV + R LE + + +ACG
Sbjct: 357 GRLILWEAPPLGAGGGTLLPGAVELPQPQFVSR-------FLEGQSGVTIKHVACGDLFT 409
Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGD 368
+T +G I ++G GS G LGHG D+S P +++AL G + VACG H A++ G+
Sbjct: 410 ACLTDRGIIMTFGSGSNGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHVLALSTDGE 469
Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
L+ WG G LG + SH P++V G + + CG + +TS G++ G
Sbjct: 470 LFAWGRGDGG--RLGLGTRESHNCPQQVP-VAPGQEAQRVVCGIDSSMILTSPGRVLACG 526
Query: 429 DGTFGALG--HGDRSSTSVP-REVE-----------TLKELKTVMASCGVWHTAAIVEVA 474
F LG H VP ++VE L + + G H+AAI
Sbjct: 527 SNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAIT--- 583
Query: 475 GKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIAL 534
+S +T+G GQLG P V+ + I VACG + T+A+
Sbjct: 584 ---------ASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAV 634
Query: 535 TATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY-IEDIAC--GSYHIAVVSSKSE 591
A G+V+S G G+LG P ++ + H Y + ++C G+ +AV S E
Sbjct: 635 GAEGEVYSWGKGTRGRLGRRDEDAGLPRPVQLDETHPYMVTSVSCCHGNTLLAVRSVTDE 694
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 150/341 (43%), Gaps = 45/341 (13%)
Query: 317 IFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGI 376
+++WG G +S P + LN + + VA G VT SG L W
Sbjct: 320 VYAWGGG------------LSSPLRLPMLN-TEVVQVAAGRTQKAGVTRSGRLILWEAPP 366
Query: 377 HNLG---LLGQVSEISH--WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
G LL E+ ++ R + GQ G+ I + CG TA +T G + TFG G+
Sbjct: 367 LGAGGGTLLPGAVELPQPQFVSRFLEGQ-SGVTIKHVACGDLFTACLTDRGIIMTFGSGS 425
Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTW 491
G LGHG+ + S P VE L + V +CG H A+ T G +LF W
Sbjct: 426 NGCLGHGNLTDISQPTIVEALLGYEMVQVACGASHVLAL-----STDG-------ELFAW 473
Query: 492 GDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQL 551
G G G+LG G E P V V+ +V CG ++ LT+ G+V + GS + +L
Sbjct: 474 GRGDGGRLGLGTRESHNCPQQVPVAPGQEAQRVVCGIDSSMILTSPGRVLACGSNRFNKL 533
Query: 552 GSPG-STGKFPT---RIEGNIKHRYI-------EDIAC---GSYHIAVVSSKSEVYTWGK 597
G S + P ++E + + E + C G+ H A +++ + YT+G
Sbjct: 534 GLDHLSLDEEPVPYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGS 593
Query: 598 GANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
+GQLG + P V+ L ++ V CG FT A+
Sbjct: 594 NQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFTVAV 634
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 109/227 (48%), Gaps = 21/227 (9%)
Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
+T ++F FG LG GD ST VP+++E L K S G
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYG-------------- 82
Query: 478 SGSNGLSSKK---LFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDI-SFCKVACGHSITIA 533
SG + L S + ++ WG QLG+G + P+ V + I +VACG ++A
Sbjct: 83 SGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMA 142
Query: 534 LTATGQVFSMGSADYGQLGSPGSTGKFPT--RIEGNIKHRYIEDIACGSYHIAVVSSKSE 591
L A G+VF+ G + GQ+GS GST PT ++ + + + IACG V E
Sbjct: 143 LAADGEVFAWGYNNCGQVGS-GSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 201
Query: 592 VYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
VY WG NGQLG G+N N+ TP V AL V +VCG T A+
Sbjct: 202 VYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLAL 248
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 132/294 (44%), Gaps = 19/294 (6%)
Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF-HTCAVTLS 366
A+ VT ++F +G LG G PK ++ L G I ++ G H T
Sbjct: 34 ALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTED 93
Query: 367 GDLYTWGDGIHN-LGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
G +Y WG HN LG + P +V + Q+ + CG H+ A+ + G++F
Sbjct: 94 GVVYAWG---HNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALAADGEVF 150
Query: 426 TFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSS 485
+G G +G G ++ PR+V +K V+ G+TS L +
Sbjct: 151 AWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGI-----------ACGQTSSMAVLDN 199
Query: 486 KKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
+++ WG GQLG G+ ++ P+ V + ++ CG++ T+ALT G +++ G+
Sbjct: 200 GEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGA 259
Query: 546 ADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSK-SEVYTWGK 597
YGQLG+ P I K R +E AC S H + ++ VY WG+
Sbjct: 260 NTYGQLGTGNKNNLLSPAHIMVE-KERVVEIAACHSAHTSAAKTQGGHVYMWGQ 312
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 127/246 (51%), Gaps = 34/246 (13%)
Query: 253 GDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
G V+ WG LGNG + V++ + + L+ +V+E +ACGS H+
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGIAPVQVCT----NLLIKQVVE---------VACGSHHS 140
Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYP-KLIDALNGSNIHMVACGEFHTCAVTLSG 367
+ + G++F+WG + G++G G A+ P K+ + L+ + +ACG+ + AV +G
Sbjct: 141 MALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNG 200
Query: 368 DLYTWG-DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
++Y WG +G LGL ++++ P +V+ + + ++ I CG HT A+T G L+
Sbjct: 201 EVYGWGYNGNGQLGLGNNGNQLT---PVRVAA-LHSVCVNQIVCGYAHTLALTDEGLLYA 256
Query: 427 FGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
+G T+G LG G++++ P + KE +A+C HT+ A KT G +
Sbjct: 257 WGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTS-----AAKTQGGH----- 306
Query: 487 KLFTWG 492
++ WG
Sbjct: 307 -VYMWG 311
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 128/283 (45%), Gaps = 28/283 (9%)
Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSIC--CGPWHTAAITS 420
VT + +++ +G N LG S +P+K+ G + G +I S+ GP H T
Sbjct: 37 VTDNDEVFVFGLNYSNC--LGTGDNQSTLVPKKLEG-LCGKKIKSLSYGSGP-HVLLSTE 92
Query: 421 AGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVM-ASCGVWHTAAIVEVAGKTSG 479
G ++ +G + LG+G + P +V T +K V+ +CG H+ A+
Sbjct: 93 DGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACGSHHSMALA-------- 144
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAE----PRVVPLCVKVSDDISFCKVACGHSITIALT 535
+ ++F WG GQ+G G PR V C+ + + +ACG + ++A+
Sbjct: 145 ----ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVG---IACGQTSSMAVL 197
Query: 536 ATGQVFSMGSADYGQLGSPGSTGKF-PTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYT 594
G+V+ G GQLG + + P R+ + + I CG H ++ + +Y
Sbjct: 198 DNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAA-LHSVCVNQIVCGYAHTLALTDEGLLYA 256
Query: 595 WGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
WG GQLG G+ N +P + +++ V+ C S T+A
Sbjct: 257 WGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAACHSAHTSA 299
Score = 33.9 bits (76), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 586 VSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVS 645
V+ EV+ +G + LG GDN++ P +E L K++KS+ GS + GV
Sbjct: 37 VTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGPHVLLSTEDGVV 96
Query: 646 IA 647
A
Sbjct: 97 YA 98
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 111/222 (50%), Gaps = 43/222 (19%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVA 354
L A+ + G++HA+L+ GQ+FSWG G G+LGHG +EA++ P+L++AL G + VA
Sbjct: 158 LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELE-PRLLEALQGLTMAEVA 216
Query: 355 CGEFHTCAVTLSGDLYTWGDGIHNLGLLG----QVSEISHWIPRKVSGQME-GLQIS--- 406
G +H+ V+ +GD+Y W G + G L ++E + R+ +G E G Q+
Sbjct: 217 AGGWHSVCVSETGDIYIW--GWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTG 274
Query: 407 -----------------------------SICCGPWHTAAITSAGKLFTFGDGTFGALGH 437
+ CG HTA +T G+L+T+G G +G LGH
Sbjct: 275 RVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGH 334
Query: 438 GDRSSTSVPREVETL--KELKTVMASCGVWHTAAIVEVAGKT 477
D +S PR VE K+L+ +CG W+T GK+
Sbjct: 335 EDTTSLDWPRRVEYFVDKQLQVKAVTCGPWNTYVYAVEKGKS 376
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 89/202 (44%), Gaps = 40/202 (19%)
Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
++ ++F+WG G GQLGHG E + P ++ ++ +VA G ++ ++ TG ++
Sbjct: 175 AAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLTMAEVAAGGWHSVCVSETGDIYIW 234
Query: 544 GSADYGQLGSP---------------------GSTGKFPTRIEGNIKHRYIE-------- 574
G + GQL P GS K R+E +I
Sbjct: 235 GWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALL 294
Query: 575 ---------DIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDK-- 623
++CGS H AVV+ E+YTWG G GQLGH D + P VE DK
Sbjct: 295 DLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDWPRRVEYFVDKQL 354
Query: 624 QVKSVVCGSNFTAAICLHKGVS 645
QVK+V CG T + KG S
Sbjct: 355 QVKAVTCGPWNTYVYAVEKGKS 376
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 88/206 (42%), Gaps = 51/206 (24%)
Query: 249 FDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHA 308
D G VF WG G +G LG E+ P++LE+ L +A G H+
Sbjct: 173 LDAAGQVFSWGGGR-HGQLGHGTLEAELE---------PRLLEALQGLTMAEVAAGGWHS 222
Query: 309 VLVTKQGQIFSWGEGSGGKL-----------------GHGVEADVS-------------- 337
V V++ G I+ WG G+L G+ D S
Sbjct: 223 VCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPA 282
Query: 338 -------YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH 390
+P L+D GS+ V+CG HT VT +G+LYTWG G + G LG S
Sbjct: 283 PFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELYTWGWGKY--GQLGHEDTTSL 340
Query: 391 WIPRKVSGQMEG-LQISSICCGPWHT 415
PR+V ++ LQ+ ++ CGPW+T
Sbjct: 341 DWPRRVEYFVDKQLQVKAVTCGPWNT 366
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 148/355 (41%), Gaps = 55/355 (15%)
Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL-NGSNIHMVACGEFHTCAVTLS 366
AV+ ++ +++ WG GGK S P+ +D + +G + V G H VT+
Sbjct: 340 AVVTSRTSEVYVWG---GGK---------STPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387
Query: 367 GDLYTW-----GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
+LYTW G +H G LG + S+ P+ V +++G I + CG T +T
Sbjct: 388 KELYTWVNMQGGTKLH--GQLGHGDKASYRQPKHVE-KLQGKAIHQVSCGDDFTVCVTDE 444
Query: 422 GKLFTFGDGTFGALGHGDRSSTSV--PREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
G+L+ FG +G +G S V P ++ SCG H +
Sbjct: 445 GQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTR------- 497
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
+K++++WG G G+LG E P V V + V CG T LT +G+
Sbjct: 498 -----NKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQSGK 552
Query: 540 VFSMGSADYGQLG----------------SPGSTGKFPTRIEGNIKHRYIEDIACGSYHI 583
V + G ++ +LG P +T + + I IA G H
Sbjct: 553 VLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTS---FTLAKQLSFYKIRTIAPGKTHT 609
Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA-LRDKQVKSVVCGSNFTAA 637
A + + + T+G GQLG G+ + + L+ L KQV V CG FT A
Sbjct: 610 AAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 664
Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 140/325 (43%), Gaps = 20/325 (6%)
Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGG-----KLGHGVEADVSYPKLIDALNGSNIHM 352
A+ + G+ H +VT + ++++W GG +LGHG +A PK ++ L G IH
Sbjct: 371 ARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQ 430
Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
V+CG+ T VT G LY +G + + +VS P +++ + + + CG
Sbjct: 431 VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSN-PVEQVSCGD 489
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
H +T +++++G G +G LG P+ V+ K L V CG T + +
Sbjct: 490 NHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGCDGTFLLTQ 549
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK---VACGHS 529
+GK GL+ G + H ++ +SF K +A G +
Sbjct: 550 -SGKVLAC-GLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKT 607
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKFPTR-----IEGNIKHRYIEDIACGSYHIA 584
T A+ G++ + G GQLG G + R + G + + + ++CG
Sbjct: 608 HTAAIDERGRLLTFGCNKCGQLG----VGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTI 663
Query: 585 VVSSKSEVYTWGKGANGQLGHGDNE 609
+ + ++ WG G NG+L E
Sbjct: 664 AATDDNHIFAWGNGGNGRLAMTPTE 688
Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 155/364 (42%), Gaps = 54/364 (14%)
Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
+++ W G L G ++ D+ PK +E ++CG V VT
Sbjct: 389 ELYTWVNMQGGTKLHG-----QLGHGDKASYRQPKHVEKLQGKAIHQVSCGDDFTVCVTD 443
Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALN-----GSNIHMVACGEFHTCAVTLSGD 368
+GQ++++G G +G VS P++++ + + + V+CG+ H +T + +
Sbjct: 444 EGQLYAFGSDYYGCMG---VDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKE 500
Query: 369 LYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
+Y+WG G G LG SE ++ P++V + L I ++ CG T +T +GK+ G
Sbjct: 501 VYSWGCG--EYGRLGLDSEEDYYTPQRVDVP-KALIIVAVQCGCDGTFLLTQSGKVLACG 557
Query: 429 DGTFGALGHGDRSSTSVPRE-------------VETLKELKTVMASCGVWHTAAIVEVAG 475
F LG S + E + L K + G HTAAI E
Sbjct: 558 LNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDE--- 614
Query: 476 KTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIAL 534
+L T+G GQLG G+ + R+ + L +V+CG TIA
Sbjct: 615 ---------RGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAA 665
Query: 535 TATGQVFSMGSADYGQL---------GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAV 585
T +F+ G+ G+L GS T +P I G++ H + D++C +H +
Sbjct: 666 TDDNHIFAWGNGGNGRLAMTPTERPHGSDICT-SWPRPIFGSLHH--VPDLSCRGWHTIL 722
Query: 586 VSSK 589
+ K
Sbjct: 723 IVEK 726
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 116/279 (41%), Gaps = 35/279 (12%)
Query: 242 QGSCHEDFDGL----GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLD 297
Q SC +DF G ++ +G + V+G E+ L P L +
Sbjct: 430 QVSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVSGPEV--------LEPMQLNFFLSNP 481
Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGE 357
+ ++CG H V++T+ +++SWG G G+LG E D P+ +D I V CG
Sbjct: 482 VEQVSCGDNHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQRVDVPKALIIVAVQCGC 541
Query: 358 FHTCAVTLSGDLYTWG-DGIHNLGLLGQVS-----EISHWIPRKVS----GQMEGLQISS 407
T +T SG + G + + LGL +S E H +P S Q+ +I +
Sbjct: 542 DGTFLLTQSGKVLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRT 601
Query: 408 ICCGPWHTAAITSAGKLFTFGDGTFGALGHGD-RSSTSVPREVETLKELKTVMASCGVWH 466
I G HTAAI G+L TFG G LG G+ + + L + + SCG
Sbjct: 602 IAPGKTHTAAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEF 661
Query: 467 TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAE 505
T A + +F WG+G G+L E
Sbjct: 662 TIAATD------------DNHIFAWGNGGNGRLAMTPTE 688
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 576 IACGSYHIAVVSSKSEVYTW-----GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
+ G+ H AVV+ + E+YTW G +GQLGHGD + + P VE L+ K + V C
Sbjct: 374 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIHQVSC 433
Query: 631 GSNFTAAI 638
G +FT +
Sbjct: 434 GDDFTVCV 441
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 163/377 (43%), Gaps = 43/377 (11%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
LP+VLE ++IACG++H ++++ GQ+ +WG G+ G G ++ +D
Sbjct: 767 LPRVLEYPGG-RPRAIACGAEHILVLSSSGQLSAWGGNRFGQCGVGHSFRIANLHQVDG- 824
Query: 346 NGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405
+ I +ACG+FH+ + G L+T+G G+ G + + +P +V+G + ++
Sbjct: 825 DWPAIEKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLI--CKV 882
Query: 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVW 465
+ I CG HT +T G++ G G++G +G D L L+ + +
Sbjct: 883 TQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRDIATHYY 942
Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA 525
H+ I E ++F WG P+ + + + V I ++
Sbjct: 943 HSICITE------------DNRVFEWG-----------RNPQELKMRMFVMKKIRSAQLK 979
Query: 526 CGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRY---IEDIACGSYH 582
+ +T GS L P + + +KH I +ACG H
Sbjct: 980 NTEDPSSPSPSTN-----GSTPRVNLNLPAEIPREDLGLR-EVKHFLDGNIVSVACGLSH 1033
Query: 583 IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHK 642
A+++S+ +YTWGKG + QLGHG+ + P V + +V G+N T A
Sbjct: 1034 SALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVNVSLGNNHTIA----- 1088
Query: 643 GVSIADHSICSGCRNQF 659
S D S+ + +N F
Sbjct: 1089 --STDDGSVFAWGKNDF 1103
Score = 89.7 bits (221), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 127/295 (43%), Gaps = 58/295 (19%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG--VEADVSYPKLIDALNGSNIHMVACG 356
+ IACG H+ + G ++++G G G+LGHG ++ P ++ L + +ACG
Sbjct: 830 EKIACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLI-CKVTQIACG 888
Query: 357 EFHTCAVTLSGDLYTWGDGIH-NLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
HT +T +G + G G + +G+ + ++ + P + L++ I +H+
Sbjct: 889 RAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGP----LRVRDIATHYYHS 944
Query: 416 AAITSAGKLFTFGDG---------------TFGALGHGDRSSTS---------------- 444
IT ++F +G + D SS S
Sbjct: 945 ICITEDNRVFEWGRNPQELKMRMFVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLNLPA 1004
Query: 445 -VPREVETLKELK------TVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEG 497
+PRE L+E+K V +CG+ H+A I S L+TWG G +
Sbjct: 1005 EIPREDLGLREVKHFLDGNIVSVACGLSHSALIT------------SEGTLYTWGKGLDY 1052
Query: 498 QLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG 552
QLGHG+ R+ P V + + V+ G++ TIA T G VF+ G D+GQ G
Sbjct: 1053 QLGHGNKNERMEPHQVFEPNGAKWVNVSLGNNHTIASTDDGSVFAWGKNDFGQCG 1107
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 148/355 (41%), Gaps = 55/355 (15%)
Query: 308 AVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL-NGSNIHMVACGEFHTCAVTLS 366
AV+ ++ +++ WG GGK S P+ +D + +G + V G H VT+
Sbjct: 340 AVVTSRTSEVYVWG---GGK---------STPQKLDVIKSGCSARQVCAGNTHFAVVTVE 387
Query: 367 GDLYTW-----GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
+LYTW G +H G LG + S+ P+ V +++G I + CG T +T
Sbjct: 388 KELYTWVNMQGGTKLH--GQLGHGDKASYRQPKHVE-KLQGKAIRQVSCGDDFTVCVTDE 444
Query: 422 GKLFTFGDGTFGALGHGDRSSTSV--PREVETLKELKTVMASCGVWHTAAIVEVAGKTSG 479
G+L+ FG +G +G + V P ++ SCG H +
Sbjct: 445 GQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTR------- 497
Query: 480 SNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQ 539
+K++++WG G G+LG E P V V + V CG T LT +G+
Sbjct: 498 -----NKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQSGK 552
Query: 540 VFSMGSADYGQLG----------------SPGSTGKFPTRIEGNIKHRYIEDIACGSYHI 583
V + G ++ +LG P +T + + I IA G H
Sbjct: 553 VLACGLNEFNKLGLNQCMSGIINHEAYHEVPYTTS---FTLAKQLSFYKIRTIAPGKTHT 609
Query: 584 AVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA-LRDKQVKSVVCGSNFTAA 637
A + + + T+G GQLG G+ + + L+ L KQV V CG FT A
Sbjct: 610 AAIDERGRLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIA 664
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 140/325 (43%), Gaps = 20/325 (6%)
Query: 298 AQSIACGSKHAVLVTKQGQIFSWGEGSGG-----KLGHGVEADVSYPKLIDALNGSNIHM 352
A+ + G+ H +VT + ++++W GG +LGHG +A PK ++ L G I
Sbjct: 371 ARQVCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQ 430
Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
V+CG+ T VT G LY +G + + +V+ P +++ + + + CG
Sbjct: 431 VSCGDDFTVCVTDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSN-PVEQVSCGD 489
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
H +T +++++G G +G LG P++V+ K L V CG T + +
Sbjct: 490 NHVVVLTRNKEVYSWGCGEYGRLGLDSEEDYYTPQKVDVPKALIIVAVQCGCDGTFLLTQ 549
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCK---VACGHS 529
+GK GL+ G + H ++ +SF K +A G +
Sbjct: 550 -SGKVLAC-GLNEFNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKT 607
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKFPTR-----IEGNIKHRYIEDIACGSYHIA 584
T A+ G++ + G GQLG G + R + G + + + ++CG
Sbjct: 608 HTAAIDERGRLLTFGCNKCGQLG----VGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTI 663
Query: 585 VVSSKSEVYTWGKGANGQLGHGDNE 609
+ + ++ WG G NG+L E
Sbjct: 664 AATDDNHIFAWGNGGNGRLAMTPTE 688
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 155/361 (42%), Gaps = 48/361 (13%)
Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
+++ W G L G ++ D+ PK +E + ++CG V VT
Sbjct: 389 ELYTWVNMQGGTKLHG-----QLGHGDKASYRQPKHVEKLQGKAIRQVSCGDDFTVCVTD 443
Query: 314 QGQIFSWGEGSGGKLGHGVEA--DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYT 371
+GQ++++G G +G A +V P ++ + + V+CG+ H +T + ++Y+
Sbjct: 444 EGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEVYS 503
Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
WG G + G LG SE ++ P+KV + L I ++ CG T +T +GK+ G
Sbjct: 504 WGCGEY--GRLGLDSEEDYYTPQKVDVP-KALIIVAVQCGCDGTFLLTQSGKVLACGLNE 560
Query: 432 FGALGHGDRSSTSVPRE-------------VETLKELKTVMASCGVWHTAAIVEVAGKTS 478
F LG S + E + L K + G HTAAI E
Sbjct: 561 FNKLGLNQCMSGIINHEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERG---- 616
Query: 479 GSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTAT 537
+L T+G GQLG G+ + R+ + L +V+CG TIA T
Sbjct: 617 --------RLLTFGCNKCGQLGVGNYKKRLGINLLGGPLGGKQVIRVSCGDEFTIAATDD 668
Query: 538 GQVFSMGSADYGQL---------GSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSS 588
+F+ G+ G+L GS T +P I G++ H + D++C +H ++
Sbjct: 669 NHIFAWGNGGNGRLAMTPTERPHGSDICT-SWPRPIFGSLHH--VPDLSCRGWHTILIVE 725
Query: 589 K 589
K
Sbjct: 726 K 726
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 576 IACGSYHIAVVSSKSEVYTW-----GKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVC 630
+ G+ H AVV+ + E+YTW G +GQLGHGD + + P VE L+ K ++ V C
Sbjct: 374 VCAGNTHFAVVTVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGKAIRQVSC 433
Query: 631 GSNFTAAI 638
G +FT +
Sbjct: 434 GDDFTVCV 441
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 41/221 (18%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVA 354
L A+ + G++HA+L+ GQ+FSWG G G+LGHG +EA++ P+L++AL G + VA
Sbjct: 158 LRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELE-PRLLEALQGLVMAEVA 216
Query: 355 CGEFHTCAVTLSGDLYTWG----------------DGIHNLGLLGQVSEISHWIPRKVSG 398
G +H+ V+ +GD+Y WG DG +++E + ++ G
Sbjct: 217 AGGWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQV-KRTGG 275
Query: 399 QMEGLQISSIC--------------------CGPWHTAAITSAGKLFTFGDGTFGALGHG 438
+G I CG HTA +T G+L+T+G G +G LGH
Sbjct: 276 AEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHE 335
Query: 439 DRSSTSVPREVETL--KELKTVMASCGVWHTAAIVEVAGKT 477
D +S PR VE K+L+ +CG W+T GK+
Sbjct: 336 DTTSLDRPRRVEYFVDKQLQVKAVTCGPWNTYVYAVEKGKS 376
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 89/203 (43%), Gaps = 42/203 (20%)
Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
++ ++F+WG G GQLGHG E + P ++ + +VA G ++ ++ TG ++
Sbjct: 175 AAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSETGDIYIW 234
Query: 544 GSADYGQLGSP---------------------GSTGK------------------FPTRI 564
G + GQL P GS K FP +
Sbjct: 235 GWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALL 294
Query: 565 EGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDK- 623
+ + ++ +CGS H AVV+ E+YTWG G GQLGH D + P VE DK
Sbjct: 295 DLPMGSDAVK-ASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQ 353
Query: 624 -QVKSVVCGSNFTAAICLHKGVS 645
QVK+V CG T + KG S
Sbjct: 354 LQVKAVTCGPWNTYVYAVEKGKS 376
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 87/210 (41%), Gaps = 59/210 (28%)
Query: 249 FDGLGDVFIWGEG----LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACG 304
D G VF WG G LG+G L L P++LE+ L +A G
Sbjct: 173 LDAAGQVFSWGGGRHGQLGHGTL--------------EAELEPRLLEALQGLVMAEVAAG 218
Query: 305 SKHAVLVTKQGQIFSWGEGSGGKL----------GHGVEADVS----------------- 337
H+V V++ G I+ WG G+L G V + +
Sbjct: 219 GWHSVCVSETGDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAED 278
Query: 338 -----------YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVS 386
+P L+D GS+ +CG HT VT +G+LYTWG G + G LG
Sbjct: 279 GAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKY--GQLGHED 336
Query: 387 EISHWIPRKVSGQMEG-LQISSICCGPWHT 415
S PR+V ++ LQ+ ++ CGPW+T
Sbjct: 337 TTSLDRPRRVEYFVDKQLQVKAVTCGPWNT 366
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 86/202 (42%), Gaps = 28/202 (13%)
Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
H + +AG++F++G G G LGHG + PR +E L+ L + G WH+ + E
Sbjct: 169 HALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMAEVAAGGWHSVCVSET 228
Query: 474 AG------KTSGSNGLSSKKLFTWG------------DGAE----GQLGHGDAEPRVV-- 509
SG L ++ L G DG++ G G P +
Sbjct: 229 GDIYIWGWNESGQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQ 288
Query: 510 --PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTG-KFPTRIEG 566
P + + K +CG T +T TG++++ G YGQLG +T P R+E
Sbjct: 289 PFPALLDLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDRPRRVEY 348
Query: 567 NI-KHRYIEDIACGSYHIAVVS 587
+ K ++ + CG ++ V +
Sbjct: 349 FVDKQLQVKAVTCGPWNTYVYA 370
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 506 PRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIE 565
PR P ++ ++ ++ G + L A GQVFS G +GQLG + R+
Sbjct: 146 PRA-PFYRPLAPELRARQLELGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLL 204
Query: 566 GNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
++ + ++A G +H VS ++Y WG +GQL
Sbjct: 205 EALQGLVMAEVAAGGWHSVCVSETGDIYIWGWNESGQL 242
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 567 NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVK 626
++ R +E G+ H ++ + +V++WG G +GQLGHG E + P L+EAL+ +
Sbjct: 157 ELRARQLE---LGAEHALLLDAAGQVFSWGGGRHGQLGHGTLEAELEPRLLEALQGLVMA 213
Query: 627 SVVCG 631
V G
Sbjct: 214 EVAAG 218
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 167/353 (47%), Gaps = 50/353 (14%)
Query: 312 TKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
T+ G + + G+G G+LG G + P L+ L ++ G HT + SG +Y
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQ--DVVQAEAGGMHTVCLNQSGQVY 89
Query: 371 TWGDGIHNLGLLGQVSEI--SHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
++G ++ G LG+ + + S +P KV Q + +Q+S+ G HTAA+T G++F +G
Sbjct: 90 SFG--CNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSA---GDSHTAALTEDGRVFLWG 144
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL----S 484
+F R + V + L+ +K M V +V+VA SG++ L +
Sbjct: 145 --SF-------RDNNGV---IGLLEPMKKSMVPVQVQLDMPVVKVA---SGNDHLVMLTT 189
Query: 485 SKKLFTWGDGAEGQLGH-----------GDAEPRVVPLCVKVSDD-----ISFCKVACGH 528
L+T G G +GQLG E +VP CV + + F CG
Sbjct: 190 DGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGA 249
Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH--RYIEDIACGSYHIAVV 586
+T A++ G V+ G ++Y QLG+PG+ F + + K+ + + G +H +
Sbjct: 250 YLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICM 309
Query: 587 SSKSEVYTWGKGANGQLGHGDN-ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
S+ + Y+ G+ G+LG G+ E K PTL+ L V SV CG++ A+
Sbjct: 310 DSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PVVSSVACGASVGYAV 360
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 177/409 (43%), Gaps = 58/409 (14%)
Query: 262 LGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWG 321
LG G +G G+ S +R+ L +L+ V +A G H V + + GQ++S+G
Sbjct: 40 LGQGDVGQL--GLGESVLERKKPALVPLLQDVVQAEA-----GGMHTVCLNQSGQVYSFG 92
Query: 322 EGSGGKLGH--GVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNL 379
G LG VE P ++ + V+ G+ HT A+T G ++ WG N
Sbjct: 93 CNDEGALGRDTSVEGSEMVPGKVELQE--KVVQVSAGDSHTAALTEDGRVFLWGSFRDNN 150
Query: 380 GLLGQVSEISH-WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH- 437
G++G + + +P +V M ++++S G H +T+ G L+T G G G LG
Sbjct: 151 GVIGLLEPMKKSMVPVQVQLDMPVVKVAS---GNDHLVMLTTDGDLYTLGCGEQGQLGRV 207
Query: 438 -------GDRSSTS---VPREVETLK------ELKTVMASCGVWHTAAIVEVAGKTSGSN 481
G R VP+ V LK ++ A CG + T AI
Sbjct: 208 PELFANRGGRQGLERLLVPKCV-LLKSRGSRGRVRFQDAFCGAYLTFAI----------- 255
Query: 482 GLSSKKLFTWGDGAEG--QLGHGDAEPRVVP--LCVKVSDDISFCKVACGHSITIALTAT 537
S++ +G G QLG +P L + S+ + G TI + +
Sbjct: 256 ---SREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSE 312
Query: 538 GQVFSMGSADYGQLG-SPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
G+ +S+G A+YG+LG G+ K PT I + + +ACG+ VS V+ W
Sbjct: 313 GKAYSLGRAEYGRLGLGEGAEEKSIPTLIS---RLPVVSSVACGASVGYAVSKDGRVFAW 369
Query: 596 GKGANGQLGHGDNENKQTPTLV--EALRDKQVKSVVCGSNFTAAICLHK 642
G G N QLG G +E+ +P + + L ++ V +V G T + K
Sbjct: 370 GMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLLVKDK 418
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 133/315 (42%), Gaps = 43/315 (13%)
Query: 301 IACGSKHAVLVTKQGQIFSWG-----EGSGGKLGHGVEADVSYPKLIDALNGSNIHMVAC 355
++ G H +T+ G++F WG G G L ++ V +D + VA
Sbjct: 124 VSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQVQLDM----PVVKVAS 179
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEI-----------SHWIPR----KVSGQM 400
G H +T GDLYT G G G LG+V E+ +P+ K G
Sbjct: 180 GNDHLVMLTTDGDLYTLGCG--EQGQLGRVPELFANRGGRQGLERLLVPKCVLLKSRGSR 237
Query: 401 EGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE-LKTVM 459
++ CG + T AI+ G ++ FG + LG +S +P+ + + K K+ +
Sbjct: 238 GRVRFQDAFCGAYLTFAISREGHVYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWV 297
Query: 460 ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-AEPRVVPLCVKVSDD 518
G H ++ GK ++ G G+LG G+ AE + +P +
Sbjct: 298 GFSGGQHHTICMDSEGKA-----------YSLGRAEYGRLGLGEGAEEKSIPTLISRLPV 346
Query: 519 ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEG-NIKHRYIEDI 576
+S VACG S+ A++ G+VF+ G QLG+ + P + G +++R + +
Sbjct: 347 VS--SVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLTV 404
Query: 577 ACGSYHIAVVSSKSE 591
+ G H ++ E
Sbjct: 405 SSGGQHTVLLVKDKE 419
Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 125/311 (40%), Gaps = 52/311 (16%)
Query: 218 DANSRSSTADSFRISLSSAVSSSSQGSCH-----EDFDGLGDVFIWGEGLGNGLLGGAVN 272
D + S ++ L V S G H ED G VF+WG N N
Sbjct: 102 DTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTED----GRVFLWGSFRDN-------N 150
Query: 273 GVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLG--- 329
GV + +++P ++ + + +A G+ H V++T G +++ G G G+LG
Sbjct: 151 GVIGLLEPMKKSMVP--VQVQLDMPVVKVASGNDHLVMLTTDGDLYTLGCGEQGQLGRVP 208
Query: 330 ---------HGVEADVSYPKLIDALNGS----NIHMVACGEFHTCAVTLSGDLYTWGDGI 376
G+E + ++ GS CG + T A++ G +Y G G+
Sbjct: 209 ELFANRGGRQGLERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISREGHVY--GFGL 266
Query: 377 HNLGLLGQVSEISHWIPRKVSGQMEGLQ-ISSICCGPWHTAAITSAGKLFTFGDGTFGAL 435
N LG S +IP+ ++ + G HT + S GK ++ G +G L
Sbjct: 267 SNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGRAEYGRL 326
Query: 436 GHGDRS-STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDG 494
G G+ + S+P + L + +V +CG A V A G ++F WG G
Sbjct: 327 GLGEGAEEKSIPTLISRLPVVSSV--ACG-----ASVGYAVSKDG-------RVFAWGMG 372
Query: 495 AEGQLGHGDAE 505
QLG G E
Sbjct: 373 TNYQLGTGQDE 383
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 169/353 (47%), Gaps = 50/353 (14%)
Query: 312 TKQGQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
T+ G + + G+G G+LG G + P L+ L ++ G HT ++ SG +Y
Sbjct: 32 TEPGLVLTLGQGDVGQLGLGESVLERKKPALVPLLQ--DVVQAEAGGMHTVCLSQSGQVY 89
Query: 371 TWGDGIHNLGLLGQVSEI--SHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
++ G ++ G LG+ + + S +P KV Q + +Q+S+ G HTAA+T G++F +
Sbjct: 90 SF--GCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSA---GDSHTAALTEDGRVFLW- 143
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGL----S 484
G+F R + V + L+ +K M V A +V+VA SG++ L +
Sbjct: 144 -GSF-------RDNNGV---IGLLEPMKKSMVPVQVQLDAPVVKVA---SGNDHLVMLTN 189
Query: 485 SKKLFTWGDGAEGQLGH-----GDAEPR------VVPLCVKVSD-----DISFCKVACGH 528
L+T G G +GQLG + R +VP CV + + F CG
Sbjct: 190 DGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRCVLLKSRGTRGRVRFQDAFCGA 249
Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH--RYIEDIACGSYHIAVV 586
T A++ G V+ G ++Y QLG+PG+ F + + K+ + + G +H +
Sbjct: 250 YFTFAISREGHVYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCM 309
Query: 587 SSKSEVYTWGKGANGQLGHGDN-ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
S+ + Y+ G+ G+LG G+ E K PTL+ L V SV CG++ A+
Sbjct: 310 DSEGKAYSLGRAEYGRLGLGEGAEEKSIPTLISRL--PVVSSVACGASVGYAV 360
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 170/393 (43%), Gaps = 54/393 (13%)
Query: 273 GVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGH-- 330
G+ S +R+ L +L+ V +A G H V +++ GQ++S+G G LG
Sbjct: 49 GLGESVLERKKPALVPLLQDVVQAEA-----GGMHTVCLSQSGQVYSFGCNDEGALGRDT 103
Query: 331 GVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH 390
VE P ++ + V+ G+ HT A+T G ++ WG N G++G + +
Sbjct: 104 SVEGSEMVPGKVELQE--KVVQVSAGDSHTAALTEDGRVFLWGSFRDNNGVIGLLEPMKK 161
Query: 391 -WIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGH--------GDRS 441
+P +V Q++ + + G H +T+ G L+T G G G LG G R
Sbjct: 162 SMVPVQV--QLDA-PVVKVASGNDHLVMLTNDGDLYTLGCGEQGQLGRVPELFANRGGRQ 218
Query: 442 STS---VPREV-----ETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
VPR V T ++ A CG + T AI S++ +G
Sbjct: 219 GLGRLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAI--------------SREGHVYGF 264
Query: 494 GAEG--QLGHGDAEPRVVP--LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYG 549
G QLG +P L + S+ + G T+ + + G+ +S+G A+YG
Sbjct: 265 GLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYG 324
Query: 550 QLG-SPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
+LG G+ K PT I + + +ACG+ VS V+ WG G N QLG G
Sbjct: 325 RLGLGEGAEEKSIPTLIS---RLPVVSSVACGASVGYAVSKDGRVFAWGMGTNYQLGTGQ 381
Query: 608 NENKQTPTLV--EALRDKQVKSVVCGSNFTAAI 638
+E+ +P + + L ++ V +V G T +
Sbjct: 382 DEDAWSPVEMTGKQLENRVVLTVSSGGQHTVLL 414
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 166/406 (40%), Gaps = 91/406 (22%)
Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYP-KLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
V+ +F+WG S G+LG G + DV P +L D I V G H+ VT GDL
Sbjct: 11 VSAAAVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAGCIKSVTGGGGHSAVVTDGGDL 70
Query: 370 YTWG---DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
+ G DG LG LG E+ + + + G I + CG T +T G++ +
Sbjct: 71 FVCGLNKDG--QLG-LGHTEEVLRFT---ICKPLRGCPIRQVACGWDFTIMLTEKGQVLS 124
Query: 427 FGDGTFGALG--HGDRSSTSVPREVETLKELKTVMASCGVWH------------------ 466
G FG LG HG R VP+ +E L+E K V + G+ H
Sbjct: 125 CGSNAFGQLGVPHGPRKCV-VPQAIECLRE-KVVCVAAGLRHALATTATGSVFQWGTGLA 182
Query: 467 -----------------------------TAAIVEVAGKTSGSNGLSSKKLFTWGDGAEG 497
+ A+ VAG ++ + +L+ WG G
Sbjct: 183 SSGRRLCPGQNLPLFLTAKEPSRVTGLENSTAVCAVAGSDHSASLTDTGELYVWGRNKHG 242
Query: 498 QLGHGDAEPRVVPLCVKVS----DDISFCKVACGHSITIALTATGQVFSMGSADYGQLG- 552
QL + +PL ++ D V G + +A T TG+VF+ G ADYGQLG
Sbjct: 243 QLA---SRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVFTWGRADYGQLGR 299
Query: 553 --SPGSTGKFPTRIEGNIKHRYIE--------------DIACGSYH-IAVVSSKSEVYTW 595
P K P + ++ + + +I+CGS H +AV+ K +W
Sbjct: 300 RLEPPEAQK-PVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRDK--CCSW 356
Query: 596 GKGANGQLGHGDNENKQTPTLVEAL--RDKQVKSVVCGSNFTAAIC 639
G +G G G N TPT V+AL ++ V CG+ + A+C
Sbjct: 357 GWNEHGMCGDGTESNVWTPTPVQALPPSPSRLLLVGCGAGHSLAVC 402
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 37/208 (17%)
Query: 296 LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVA 354
L + + G++H +L+ GQ+FSWG G G+LGHG +EA++ P+L++AL G + VA
Sbjct: 161 LRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELE-PRLLEALQGLRMAKVA 219
Query: 355 CGEFHTCAVTLSGDLYTWG-----------------------------DGIHNLGLLGQV 385
G +H+ ++ +GD+Y WG DG+ +
Sbjct: 220 AGGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADA 279
Query: 386 SEISHWIPRKVSGQMEGLQISS----ICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRS 441
+H+I + + L + S CG HTA +T G+L+T+G G +G LGH D +
Sbjct: 280 GAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDST 339
Query: 442 STSVPREVETL--KELKTVMASCGVWHT 467
S P VE ++L+ +CG W+T
Sbjct: 340 SLDRPCCVEYFVERQLEVRAVTCGPWNT 367
Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 86/198 (43%), Gaps = 40/198 (20%)
Query: 484 SSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSM 543
++ ++F+WG G GQLGHG E + P ++ + KVA G ++ L+ TG ++
Sbjct: 178 AAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIW 237
Query: 544 GSADYGQLGSPGSTG-------------------------------------KFPTRIEG 566
G + GQL P +G FP ++
Sbjct: 238 GWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDL 297
Query: 567 NIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ-- 624
+ + +CGS H AVV+ E+YTWG G GQLGH D+ + P VE ++Q
Sbjct: 298 PLGSDAVM-ASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLE 356
Query: 625 VKSVVCGSNFTAAICLHK 642
V++V CG T + +
Sbjct: 357 VRAVTCGPWNTYVYAMER 374
Score = 67.0 bits (162), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 87/200 (43%), Gaps = 49/200 (24%)
Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
G VF WG G +G LG E+ P++LE+ L +A G H+V ++
Sbjct: 180 GQVFSWGAGR-HGQLGHGTLEAELE---------PRLLEALQGLRMAKVAAGGWHSVCLS 229
Query: 313 KQGQIFSWGEGSGGKLG---------------------HGVEADVS-------------- 337
+ G I+ WG G+L G++ +++
Sbjct: 230 ETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQ 289
Query: 338 -YPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKV 396
+P L+D GS+ M +CG HT VT +G+LYTWG G + G LG S P V
Sbjct: 290 PFPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKY--GQLGHKDSTSLDRPCCV 347
Query: 397 SGQME-GLQISSICCGPWHT 415
+E L++ ++ CGPW+T
Sbjct: 348 EYFVERQLEVRAVTCGPWNT 367
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 30/213 (14%)
Query: 403 LQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASC 462
L++ + G H + +AG++F++G G G LGHG + PR +E L+ L+ +
Sbjct: 161 LRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAA 220
Query: 463 GVWHTAAIVEVAG---------------KTSGSNGLSSKKLFTW--GDGAEGQLGHGDA- 504
G WH+ + E SG+ + ++ T DG + +L DA
Sbjct: 221 GGWHSVCLSETGDIYIWGWNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAG 280
Query: 505 --------EPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGS 556
+P L + + D +CG T +T TG++++ G YGQLG S
Sbjct: 281 APAHFIAIQPFPALLDLPLGSDAVM--ASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDS 338
Query: 557 TG-KFPTRIEGNIKHRY-IEDIACGSYHIAVVS 587
T P +E ++ + + + CG ++ V +
Sbjct: 339 TSLDRPCCVEYFVERQLEVRAVTCGPWNTYVYA 371
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%)
Query: 510 PLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIK 569
P C ++ ++ ++ G + L A GQVFS G+ +GQLG + R+ ++
Sbjct: 152 PFCQPLAPELRVRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQ 211
Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQL 603
+ +A G +H +S ++Y WG +GQL
Sbjct: 212 GLRMAKVAAGGWHSVCLSETGDIYIWGWNESGQL 245
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGS 632
+ + G+ H+ ++ + +V++WG G +GQLGHG E + P L+EAL+ ++ V G
Sbjct: 163 VRQLELGAEHVLLLCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGG 222
Query: 633 NFTAAICL 640
+ +CL
Sbjct: 223 WHS--VCL 228
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 286 LPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDAL 345
P +L+ + DA +CGS+H +VT+ G++++WG G G+LGH + P ++
Sbjct: 291 FPALLDLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDRPCCVEYF 350
Query: 346 NGSNIHM--VACGEFHTCAVTLSGD 368
+ + V CG ++T + D
Sbjct: 351 VERQLEVRAVTCGPWNTYVYAMERD 375
>sp|Q9UGK8|SRGEF_HUMAN Secretion-regulating guanine nucleotide exchange factor OS=Homo
sapiens GN=SERGEF PE=1 SV=2
Length = 458
Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 165/396 (41%), Gaps = 53/396 (13%)
Query: 275 EISSADRRDALLPKVLESTV-VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVE 333
++ + D LLP+ L + I G H+ +VT G +F G G+LG G
Sbjct: 27 QLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHT 86
Query: 334 ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIP 393
D+ Y +L G I VACG T +T +G + + G ++ G LG + H
Sbjct: 87 EDIPYFTPCKSLFGCPIQQVACGWDFTIMLTENGQVLSCGS--NSFGQLG----VPHGPR 140
Query: 394 RKVSGQMEGLQISSICC---GPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVE 450
R V Q L + C G H A T++G +F +G G + G ++P
Sbjct: 141 RCVVPQAIELHKEKVVCIAAGLRHAVAATASGIVFQWGTG-LASCGRRLCPGQTLPL-FF 198
Query: 451 TLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP 510
T KE V G+ ++ A+ +AG ++ + +++ WG GQL + E +P
Sbjct: 199 TAKEPSRVT---GLENSKAMCVLAGSDHSASLTDAGEVYVWGSNKHGQLAN---EAAFLP 252
Query: 511 LCVKVS----DDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-------------- 552
+ K+ + + G + +A T TG++F+ G ADYGQLG
Sbjct: 253 VPQKIEAHCFQNEKVTAIWSGWTHLVAQTETGKMFTWGRADYGQLGRKLETYEGWKLEKQ 312
Query: 553 --------SPGSTGKFPTRIEGNIKHRYIEDIACGSYH-IAVVSSKSEVYTWGKGANGQL 603
P S P + G +++CGS H +A++ Y+WG +G
Sbjct: 313 DSFLPCSRPPNSMPSSPHCLTGAT------EVSCGSEHNLAIIGGV--CYSWGWNEHGMC 364
Query: 604 GHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
G G N P V+AL V CG+ + A+C
Sbjct: 365 GDGTEANVWAPKPVQALLSSSGLLVGCGAGHSLALC 400
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 97/247 (39%), Gaps = 42/247 (17%)
Query: 253 GDVFIWGEGL---GNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAV 309
G VF WG GL G L G + ++ + P + A + GS H+
Sbjct: 172 GIVFQWGTGLASCGRRLCPGQTLPLFFTAKE------PSRVTGLENSKAMCVLAGSDHSA 225
Query: 310 LVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA--LNGSNIHMVACGEFHTCAVTLSG 367
+T G+++ WG G+L + A + P+ I+A + + G H A T +G
Sbjct: 226 SLTDAGEVYVWGSNKHGQLANEA-AFLPVPQKIEAHCFQNEKVTAIWSGWTHLVAQTETG 284
Query: 368 DLYTWGDGIHNLGLLGQVSEISH-W--------------------IPRKVSGQMEGLQIS 406
++TWG + G LG+ E W P ++G E
Sbjct: 285 KMFTWGRA--DYGQLGRKLETYEGWKLEKQDSFLPCSRPPNSMPSSPHCLTGATE----- 337
Query: 407 SICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWH 466
+ CG H AI G +++G G G G ++ P+ V+ L ++ CG H
Sbjct: 338 -VSCGSEHNLAII-GGVCYSWGWNEHGMCGDGTEANVWAPKPVQALLSSSGLLVGCGAGH 395
Query: 467 TAAIVEV 473
+ A+ ++
Sbjct: 396 SLALCQL 402
Score = 42.0 bits (97), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 547 DYGQLG-SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGH 605
YGQLG P ++ K R + I G H AVV+ +++ G +GQLG
Sbjct: 24 SYGQLGLGHKEDVLLPQQLNDFCKPRSVRRITGGGGHSAVVTDGGDLFVCGLNKDGQLGL 83
Query: 606 GDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
G E+ T ++L ++ V CG +FT +
Sbjct: 84 GHTEDIPYFTPCKSLFGCPIQQVACGWDFTIML 116
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 142/326 (43%), Gaps = 40/326 (12%)
Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADV-SYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
V +F+WG S G+LG G + DV S +L D I + G H+ VT G L
Sbjct: 11 VPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGGHSAVVTDEGSL 70
Query: 370 YTWG---DGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
+ G DG LGL G E+ ++ P K + G I + CG T +T G++ +
Sbjct: 71 FVCGLNKDG--QLGL-GHTEEVLYFTPCK---SLLGCAIQQVACGWDFTIILTENGQVLS 124
Query: 427 FGDGTFGALG--HGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS 484
G +FG LG HG R +P+ +E L+E K V + G+ H A +
Sbjct: 125 CGSNSFGQLGVPHGPRRCV-IPQAIELLRE-KVVSIAAGLRHALAAT------------A 170
Query: 485 SKKLFTWGDGAEG---QLGHGDAEPRVV----PLCVKVSDDISFCKVACGHSITIALTAT 537
S +F WG G +L G P + P V ++ V G + +LT
Sbjct: 171 SGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDA 230
Query: 538 GQVFSMGSADYGQLGSPGSTGKFPTRIEGN-IKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
G+++ GS +GQL S + P RIE ++ I + G H+ + +V+TWG
Sbjct: 231 GELYVWGSNKHGQLASQAAFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWG 290
Query: 597 KGANGQLG------HGDNENKQTPTL 616
+ GQLG G KQ P+L
Sbjct: 291 RADYGQLGRTVETREGWESEKQDPSL 316
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 157/363 (43%), Gaps = 40/363 (11%)
Query: 301 IACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHT 360
I G H+ +VT +G +F G G+LG G +V Y +L G I VACG T
Sbjct: 54 ITGGGGHSAVVTDEGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFT 113
Query: 361 CAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGL---QISSICCGPWHTAA 417
+T +G + + G ++ G LG + H R V Q L ++ SI G H A
Sbjct: 114 IILTENGQVLSCGS--NSFGQLG----VPHGPRRCVIPQAIELLREKVVSIAAGLRHALA 167
Query: 418 ITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKT 477
T++G +F +G G + G ++P + T KE TV G+ ++ A+ +AG
Sbjct: 168 ATASGTVFQWGTG-LASSGRRLCPGQTLPLFL-TAKEPSTVT---GLENSQAVCVLAGSD 222
Query: 478 SGSNGLSSKKLFTWGDGAEGQLGHGDA----EPRVVPLCVKVSDDISFCKVACGHSITIA 533
++ + +L+ WG GQL A R+ C + + V G + +A
Sbjct: 223 HSASLTDAGELYVWGSNKHGQLASQAAFLLLPQRIEARCFQ---NEKIAAVWSGWTHLVA 279
Query: 534 LTATGQVFSMGSADYGQLG--------------SPGSTGKFPTRIEGNIKHRYI--EDIA 577
T TG+VF+ G ADYGQLG P G P + + +I+
Sbjct: 280 QTVTGKVFTWGRADYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEIS 339
Query: 578 CGSYH-IAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTA 636
CGS H +AV+ ++WG +G G G + P V LR V CG+ +
Sbjct: 340 CGSEHNLAVIGGV--CHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGLHVGCGAGHSL 397
Query: 637 AIC 639
A+C
Sbjct: 398 ALC 400
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 101/239 (42%), Gaps = 28/239 (11%)
Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE---LKTVMASCGVWHTA 468
P + A+ +A LF +G ++G LG G + +++ + +K + G H+A
Sbjct: 5 PHSSEAVPTAAALFAWGANSYGQLGLGHKEDVLSAQQLSDFCKSGCIKRITGGGG--HSA 62
Query: 469 AIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGH 528
+ + LF G +GQLG G E + K + +VACG
Sbjct: 63 VVTD------------EGSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGW 110
Query: 529 SITIALTATGQVFSMGSADYGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVV 586
TI LT GQV S GS +GQLG P + P IE + + IA G H
Sbjct: 111 DFTIILTENGQVLSCGSNSFGQLGVPHGPRRCVIPQAIE--LLREKVVSIAAGLRHALAA 168
Query: 587 SSKSEVYTWGKG---ANGQLGHGDN----ENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
++ V+ WG G + +L G + P+ V L + Q V+ GS+ +A++
Sbjct: 169 TASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHSASL 227
Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 19/208 (9%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLG--HGVEADVSYPKLIDALNGSNIHMVACG 356
Q +ACG +++T+ GQ+ S G S G+LG HG V P+ I+ L + +A G
Sbjct: 104 QQVACGWDFTIILTENGQVLSCGSNSFGQLGVPHGPRRCV-IPQAIELLR-EKVVSIAAG 161
Query: 357 EFHTCAVTLSGDLYTWGDGIHNLG-LLGQVSEISHWIPRKVSGQMEGLQISSICC---GP 412
H A T SG ++ WG G+ + G L + ++ K + GL+ S C G
Sbjct: 162 LRHALAATASGTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGS 221
Query: 413 WHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
H+A++T AG+L+ +G G L + +P+ +E +A+ VW
Sbjct: 222 DHSASLTDAGELYVWGSNKHGQLAS-QAAFLLLPQRIEARCFQNEKIAA--VW------- 271
Query: 473 VAGKTSGSNGLSSKKLFTWGDGAEGQLG 500
+G T + K+FTWG GQLG
Sbjct: 272 -SGWTHLVAQTVTGKVFTWGRADYGQLG 298
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 93/242 (38%), Gaps = 32/242 (13%)
Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVV-LDAQSIAC---GSKHA 308
G VF WG GL A +G + L STV L+ C GS H+
Sbjct: 172 GTVFQWGTGL-------ASSGRRLCPGQTLPLFLTAKEPSTVTGLENSQAVCVLAGSDHS 224
Query: 309 VLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDA--LNGSNIHMVACGEFHTCAVTLS 366
+T G+++ WG G+L A + P+ I+A I V G H A T++
Sbjct: 225 ASLTDAGELYVWGSNKHGQLASQA-AFLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVT 283
Query: 367 GDLYTWGDGIHNLGLLGQVSEISH-WIPRKVSGQMEG--------------LQISSICCG 411
G ++TWG + G LG+ E W K + G + I CG
Sbjct: 284 GKVFTWGRA--DYGQLGRTVETREGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCG 341
Query: 412 PWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIV 471
H A+ G ++G G G G + P+ V L+ + CG H+ A+
Sbjct: 342 SEHNLAVI-GGVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGLHVGCGAGHSLALC 400
Query: 472 EV 473
++
Sbjct: 401 QL 402
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 107/254 (42%), Gaps = 31/254 (12%)
Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
AV + L+ WG + LG ++ +++S + I I G H+A +T
Sbjct: 10 AVPTAAALFAWGANSYGQLGLGHKEDVLS--AQQLSDFCKSGCIKRITGGGGHSAVVTDE 67
Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
G LF G G LG G ++L +CG T + E N
Sbjct: 68 GSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTE--------N 119
Query: 482 GLSSKKLFTWGDGAEGQLG--HGDAEPR--VVPLCVKVSDDISFCKVACGHSITIALTAT 537
G ++ + G + GQLG HG PR V+P +++ + +A G +A TA+
Sbjct: 120 G----QVLSCGSNSFGQLGVPHG---PRRCVIPQAIELLRE-KVVSIAAGLRHALAATAS 171
Query: 538 GQVFSMGS--ADYGQLGSPGST------GKFPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
G VF G+ A G+ PG T K P+ + G +++ + GS H A ++
Sbjct: 172 GTVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSTVTG-LENSQAVCVLAGSDHSASLTDA 230
Query: 590 SEVYTWGKGANGQL 603
E+Y WG +GQL
Sbjct: 231 GELYVWGSNKHGQL 244
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 165/352 (46%), Gaps = 49/352 (13%)
Query: 312 TKQGQIFSWGEGSGGKLGHGVE-ADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
T GQ+ + G+G G+LG G + + P L+ +I A G HT + SG +Y
Sbjct: 38 TVGGQVLTLGQGDVGQLGLGEDIMERKKPALVTLTE--DIVQAAAGGMHTVCLGASGSIY 95
Query: 371 TWGDGIHNLGLLGQVS--EISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFG 428
T+G ++ G LG+ + E S P KV + +Q+S+ G HTAA+T G++F FG
Sbjct: 96 TFG--CNDEGALGRDTSEEGSEMQPGKVELAEKVVQVSA---GDSHTAALTEDGRVFVFG 150
Query: 429 DGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLS---- 484
+F R + V + L+ +K M V ++++A SG++ L
Sbjct: 151 --SF-------RDNNGV---IGLLEPMKKSMVPVQVQINTPVIKIA---SGNDHLVLLTV 195
Query: 485 SKKLFTWGDGAEGQLGH-----------GDAEPRVVPLCV----KVSDDISFCKVACGHS 529
L+T G G +GQLG E +VP C+ K S + F V CG
Sbjct: 196 DGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGRVHFQDVFCGAY 255
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIAC--GSYHIAVVS 587
T A++ G V+ G ++Y QLG+ + + + + K+ I G +H V
Sbjct: 256 FTFAVSQEGHVYGFGLSNYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFSGGQHHTVCVD 315
Query: 588 SKSEVYTWGKGANGQLGHGDNENKQT-PTLVEALRDKQVKSVVCGSNFTAAI 638
S+ + Y+ G+ G+LG G+N +Q+ PT + L ++ SV G++ + A+
Sbjct: 316 SEGKAYSLGRAEYGRLGLGENAEEQSEPTPIPDL--PKINSVASGASVSYAV 365
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 152/371 (40%), Gaps = 46/371 (12%)
Query: 293 TVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM 352
T+ D A G H V + G I+++G G LG + S + +
Sbjct: 70 TLTEDIVQAAAGGMHTVCLGASGSIYTFGCNDEGALGRDTSEEGSEMQPGKVELAEKVVQ 129
Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH-WIPRKVSGQMEGLQISSICCG 411
V+ G+ HT A+T G ++ +G N G++G + + +P +V ++I+S G
Sbjct: 130 VSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLLEPMKKSMVPVQVQINTPVIKIAS---G 186
Query: 412 PWHTAAITSAGKLFTFGDGTFGALGH--------GDRSSTS---VPREVETLK------- 453
H +T G L+T G G G LG G R VP+ + LK
Sbjct: 187 NDHLVLLTVDGDLYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQCIH-LKAKGSGRV 245
Query: 454 ELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVP--L 511
+ V CG + T A+ + ++ +G QLG + + P L
Sbjct: 246 HFQDVF--CGAYFTFAVSQ------------EGHVYGFGLSNYHQLGTKNTQACYAPQNL 291
Query: 512 CVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG--SPGSTGKFPTRIEGNIK 569
+ S+ + G T+ + + G+ +S+G A+YG+LG PT I K
Sbjct: 292 TSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENAEEQSEPTPIPDLPK 351
Query: 570 HRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA--LRDKQVKS 627
I +A G+ VS+ V+ WG G N QLG G+ E+ +P + L D++V S
Sbjct: 352 ---INSVASGASVSYAVSTDGCVFAWGMGTNLQLGTGEEEDVWSPEQMTGKHLEDREVLS 408
Query: 628 VVCGSNFTAAI 638
V G T +
Sbjct: 409 VSSGGQHTVLL 419
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 132/314 (42%), Gaps = 46/314 (14%)
Query: 301 IACGSKHAVLVTKQGQIFSWG--EGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEF 358
++ G H +T+ G++F +G + G +G S + +N + + +A G
Sbjct: 130 VSAGDSHTAALTEDGRVFVFGSFRDNNGVIGLLEPMKKSMVPVQVQIN-TPVIKIASGND 188
Query: 359 HTCAVTLSGDLYTWGDGIHNLGLLGQVSE---------------ISHWIPRKVSGQMEGL 403
H +T+ GDLYT G G G LG+V E + I K G +
Sbjct: 189 HLVLLTVDGDLYTSGCG--EQGQLGRVPERFTNRGGRKGLERLLVPQCIHLKAKGSGR-V 245
Query: 404 QISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKE-LKTVMASC 462
+ CG + T A++ G ++ FG + LG + + P+ + + K K+ +
Sbjct: 246 HFQDVFCGAYFTFAVSQEGHVYGFGLSNYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFS 305
Query: 463 GVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGD-----AEPRVVPLCVKVSD 517
G H V+ GK ++ G G+LG G+ +EP +P K++
Sbjct: 306 GGQHHTVCVDSEGKA-----------YSLGRAEYGRLGLGENAEEQSEPTPIPDLPKINS 354
Query: 518 DISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKF-PTRIEG-NIKHRYIED 575
VA G S++ A++ G VF+ G QLG+ + P ++ G +++ R +
Sbjct: 355 ------VASGASVSYAVSTDGCVFAWGMGTNLQLGTGEEEDVWSPEQMTGKHLEDREVLS 408
Query: 576 IACGSYHIAVVSSK 589
++ G H ++ K
Sbjct: 409 VSSGGQHTVLLVRK 422
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 141/344 (40%), Gaps = 57/344 (16%)
Query: 218 DANSRSSTADSFRISLSSAVSSSSQGSCH-----EDFDGLGDVFIWGEGLGNGLLGGAVN 272
D + S ++ L+ V S G H ED G VF++G N N
Sbjct: 108 DTSEEGSEMQPGKVELAEKVVQVSAGDSHTAALTED----GRVFVFGSFRDN-------N 156
Query: 273 GVEISSADRRDALLP-KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGH- 330
GV + +++P +V +T V+ IA G+ H VL+T G +++ G G G+LG
Sbjct: 157 GVIGLLEPMKKSMVPVQVQINTPVI---KIASGNDHLVLLTVDGDLYTSGCGEQGQLGRV 213
Query: 331 -----------GVEADVSYPKLI--DALNGSNIHM--VACGEFHTCAVTLSGDLYTWGDG 375
G+E + P+ I A +H V CG + T AV+ G +Y G G
Sbjct: 214 PERFTNRGGRKGLER-LLVPQCIHLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVY--GFG 270
Query: 376 IHNLGLLGQVSEISHWIPRKVSGQMEGLQ-ISSICCGPWHTAAITSAGKLFTFGDGTFGA 434
+ N LG + + + P+ ++ + G HT + S GK ++ G +G
Sbjct: 271 LSNYHQLGTKNTQACYAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSLGRAEYGR 330
Query: 435 LGHGDRS-STSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGD 493
LG G+ + S P + L ++ +V + A V A T G +F WG
Sbjct: 331 LGLGENAEEQSEPTPIPDLPKINSVA-------SGASVSYAVSTDGC-------VFAWGM 376
Query: 494 GAEGQLGHGDAEPRVVP--LCVKVSDDISFCKVACGHSITIALT 535
G QLG G+ E P + K +D V+ G T+ L
Sbjct: 377 GTNLQLGTGEEEDVWSPEQMTGKHLEDREVLSVSSGGQHTVLLV 420
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 11/134 (8%)
Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHG-DAEPRVVPLCVKVSDDISFCKVACGHSITIALT 535
T S+G ++ T G G GQLG G D R P V +++DI + A G T+ L
Sbjct: 32 THPSHGTVGGQVLTLGQGDVGQLGLGEDIMERKKPALVTLTEDI--VQAAAGGMHTVCLG 89
Query: 536 ATGQVFSMGSADYGQLG---SPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEV 592
A+G +++ G D G LG S + P ++E + + ++ ++ G H A ++ V
Sbjct: 90 ASGSIYTFGCNDEGALGRDTSEEGSEMQPGKVE--LAEKVVQ-VSAGDSHTAALTEDGRV 146
Query: 593 YTWG--KGANGQLG 604
+ +G + NG +G
Sbjct: 147 FVFGSFRDNNGVIG 160
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 170/404 (42%), Gaps = 88/404 (21%)
Query: 310 LVTKQGQIFSWGEGSGGKLGHGVE-ADVSY-PKLIDALNGSNIHMV--ACGEFHTCAVTL 365
L T++ ++ +G GS +LG G E DV Y P+L L+ + +V A G H+ A++
Sbjct: 66 LPTERLNVYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSH 125
Query: 366 SGDLYTWGDGIHNLGLLGQVS-------------EISHWIPRKVSGQMEGLQISSICCGP 412
G +YTWG +++ LG+++ ++ P KV G + L+++ + C
Sbjct: 126 DGRVYTWG--VNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSD 183
Query: 413 WHTAAITSAGKLFTFGDGTF----GALGHGD---RSSTSVPREVETLKELKT------VM 459
TAAIT G FT+G TF G LG+ D R++ + + +L T +
Sbjct: 184 NLTAAITDNGCCFTWG--TFRCSDGVLGYSDSQKRTAEPTQMRLPEICQLATGTDHIIAL 241
Query: 460 ASCGVWHT-----------------------------AAIVEVAGKTSGSNGLSSK-KLF 489
+ G +T I+ V + S + +K +++
Sbjct: 242 TTTGKVYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKNIISVGAGSYHSFAIDNKGRVY 301
Query: 490 TWGDGAEGQLG---HGDAEPRVV--PLCVKVSDDISFCKVACGHSITIALTATGQVFSMG 544
WG Q G + E V+ P V + + + G T+AL G+V + G
Sbjct: 302 AWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLALLEDGRVLAWG 361
Query: 545 SADYGQLGSPGSTGK---------------FPTRIEGNIKHRYIEDIACGSYHIAVVSSK 589
D QLG P + PT I G + + CG++H V+S
Sbjct: 362 RDDRHQLGIPDNALPETVVKDEKGNNYYLSTPTIIPGLTN---VIQVVCGTHHNLAVTSD 418
Query: 590 SEVYTWGKGANGQLGHGDN-ENKQTPTLVEALRDKQVKSVVCGS 632
+VY+WG N ++G GDN E+ PTLV + K+V V G+
Sbjct: 419 GKVYSWGSAENYEVGQGDNDEDVAVPTLVRSKAIKEVAIRVAGA 462
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 134/298 (44%), Gaps = 45/298 (15%)
Query: 368 DLYTWGDGIHNLGLLGQVSEISHWIPR-KVSGQMEGLQISSICCGPWHTAAITSAGKLFT 426
++Y +G G N +G+ + PR + + + + G H+AA++ G+++T
Sbjct: 72 NVYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYT 131
Query: 427 FGDGTFGALG---------HGDRSSTSV----PREVE-TLKELKTVMASCGVWHTAAIVE 472
+G ALG +GD+ + P +VE L L+ C TAAI +
Sbjct: 132 WGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITD 191
Query: 473 VAGKTSGSNGLSSKKLFTWGDG--AEGQLGHGDAEPRVV-PLCVKVSDDISFCKVACGHS 529
NG FTWG ++G LG+ D++ R P +++ + C++A G
Sbjct: 192 --------NGC----CFTWGTFRCSDGVLGYSDSQKRTAEPTQMRLPE---ICQLATGTD 236
Query: 530 ITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEG----NIKHRYIEDIACGSYHIAV 585
IALT TG+V++ G+ QLG + R++G + + I + GSYH
Sbjct: 237 HIIALTTTGKVYTWGNGQQFQLGRRMLERR---RLQGLTPQPLALKNIISVGAGSYHSFA 293
Query: 586 VSSKSEVYTWGKGANGQLGHGDNENKQ-----TPTLVEALRDKQVKSVVCGSNFTAAI 638
+ +K VY WG Q G + ++ PTLV+AL VKS+ G + T A+
Sbjct: 294 IDNKGRVYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEGYNVKSITGGEHHTLAL 351
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 90.5 bits (223), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 121/449 (26%), Positives = 189/449 (42%), Gaps = 62/449 (13%)
Query: 219 ANSRSSTADSFRISLSSAVSSSSQGSCHEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISS 278
A RS AD+ S VS S H GL V G+G G LG N +E
Sbjct: 7 AKRRSPPADAIPKSKKVKVSHRS----HSTEPGL--VLTLGQG-DVGQLGLGENVME--- 56
Query: 279 ADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGH--GVEADV 336
R+ L + E V +A G H V ++K GQ++S+G G LG VE
Sbjct: 57 --RKKPALVSIPEDVVQAEA-----GGMHTVCLSKSGQVYSFGCNDEGALGRDTSVEGSE 109
Query: 337 SYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISH-WIPRK 395
P ++ + V+ G+ HT A+T G ++ WG N G++G + + +P +
Sbjct: 110 MVPGKVELQE--KVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQ 167
Query: 396 VSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDR--SSTSVPREVETLK 453
V Q++ + + + G H +T+ G L+T G G G LG ++ + +E L
Sbjct: 168 V--QLD-VPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLL 224
Query: 454 ELKTVM--------------ASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQL 499
K VM A CG + T AI ++ +G QL
Sbjct: 225 VPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISH------------EGHVYGFGLSNYHQL 272
Query: 500 GHGDAEPRVVP--LCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQLG-SPGS 556
G E +P L + S+ + G T+ + + G+ +S+G A+YG+LG G+
Sbjct: 273 GTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGA 332
Query: 557 TGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPT 615
K PT I + + +ACG+ V+ V+ WG G N QLG G +E+ +P
Sbjct: 333 EEKSIPTLIS---RLPAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPV 389
Query: 616 --LVEALRDKQVKSVVCGSNFTAAICLHK 642
+ + L ++ V SV G T + K
Sbjct: 390 EMMGKQLENRVVLSVSSGGQHTVLLVKDK 418
>sp|P25171|RCC1_DROME Regulator of chromosome condensation OS=Drosophila melanogaster
GN=Bj1 PE=1 SV=2
Length = 547
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 146/340 (42%), Gaps = 38/340 (11%)
Query: 295 VLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEAD--VSYPKLIDALNGSNIHM 352
+ DA I+ G H +++TK G I+S+G G LG D S P LID L G +
Sbjct: 73 IPDAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLID-LPGKAL-C 130
Query: 353 VACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGP 412
++ G+ H+ + G ++ WG + G +G + + P + MEG SI G
Sbjct: 131 ISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDL---MEGTVCCSIASGA 187
Query: 413 WHTAAITSAGKLFTFGDGTFGALGH-GDRSSTSVPR--EVETLKELKTVMASC----GVW 465
H +T+AGK+FT G G LG +RS + R + + L+ + ++ +W
Sbjct: 188 DHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIW 247
Query: 466 HTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEG--QLGH--GDAEPRVVPLCVKVSDDISF 521
T + S+ W G QL H E + P+ ++ D
Sbjct: 248 ATNYCTFMR---------ESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKD---I 295
Query: 522 CKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEG-NIKHRYIEDI---A 577
+A G T+ LT + +G +YG+LG G +E I + E I
Sbjct: 296 RHIAGGQHHTVILTTDLKCSVVGRPEYGRLG----LGDVKDVVEKPTIVKKLTEKIVSVG 351
Query: 578 CGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLV 617
CG V+ ++Y+WG G N QLG GD +++ P +V
Sbjct: 352 CGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVV 391
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 57/125 (45%), Gaps = 13/125 (10%)
Query: 256 FIWGEGLGN-GLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
IW GL N L G E AL P T + D + IA G H V++T
Sbjct: 262 VIWATGLNNFKQLAHETKGKEF-------ALTPI---KTELKDIRHIAGGQHHTVILTTD 311
Query: 315 GQIFSWGEGSGGKLGHG-VEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
+ G G+LG G V+ V P ++ L I V CGE + AVT+ G LY+WG
Sbjct: 312 LKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLT-EKIVSVGCGEVCSYAVTIDGKLYSWG 370
Query: 374 DGIHN 378
G++N
Sbjct: 371 SGVNN 375
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 159/364 (43%), Gaps = 47/364 (12%)
Query: 315 GQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG-SNIHMVACGEFHTCAVTLSGDLYTWG 373
G + G G G+LG G D+ K + + G + ++ G H +T SGD+Y++G
Sbjct: 42 GNVLVCGNGDVGQLGLG--EDILERKRLSPVAGIPDAVDISAGGMHNLVLTKSGDIYSFG 99
Query: 374 DGIHNLGLLGQVS--EISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD-- 429
++ G LG+ + + S P + + L IS+ G H+A + G++F +G
Sbjct: 100 --CNDEGALGRDTSEDGSESKPDLIDLPGKALCISA---GDSHSACLLEDGRVFAWGSFR 154
Query: 430 GTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLF 489
+ G +G + P ++ ++ + G H I+ AGK +F
Sbjct: 155 DSHGNMGLTIDGNKRTP--IDLMEGTVCCSIASGADHLV-ILTTAGK-----------VF 200
Query: 490 TWGDGAEGQLG---------HGDAEPR--VVPLCVKVSDDISFCKV-ACGHSITIALTAT 537
T G +GQLG G R + P + ++ F + A + + + T
Sbjct: 201 TVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQT 260
Query: 538 GQVFSMGSADYGQLGSPGSTGKFP-TRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWG 596
+++ G ++ QL +F T I+ +K I IA G +H ++++ + G
Sbjct: 261 QVIWATGLNNFKQLAHETKGKEFALTPIKTELKD--IRHIAGGQHHTVILTTDLKCSVVG 318
Query: 597 KGANGQLGHGDNEN-KQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGC 655
+ G+LG GD ++ + PT+V+ L +K V SV CG + A+ + + +S SG
Sbjct: 319 RPEYGRLGLGDVKDVVEKPTIVKKLTEKIV-SVGCGEVCSYAVTIDGKL----YSWGSGV 373
Query: 656 RNQF 659
NQ
Sbjct: 374 NNQL 377
Score = 35.4 bits (80), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 300 SIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMV 353
S+ CG + VT G+++SWG G +LG G D P ++ + N HM+
Sbjct: 349 SVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVSKNTQGKHML 402
>sp|Q9P2D0|IBTK_HUMAN Inhibitor of Bruton tyrosine kinase OS=Homo sapiens GN=IBTK PE=1
SV=3
Length = 1353
Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 104/205 (50%), Gaps = 18/205 (8%)
Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
DV+ WG+ L G+ N + L + + + Q + C H+V +++
Sbjct: 143 DVYTWGDNTNFTLGHGSQNS-------KHHPELVDLFSRSGIYIKQVVLC-KFHSVFLSQ 194
Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
+GQ+++ G G GG+LGHG E P+L++ LNG N VA + HT +T G +YT+G
Sbjct: 195 KGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 374 DGI-HNLGLLGQVSEISHWIPRKVSGQ-MEGLQISSICCGPWHTAAITSAGKLFTFG--D 429
I H LG++ S + +PR++ + ++G I + G +HT T ++T G
Sbjct: 255 LNIFHQLGIIPPPSSCN--VPRQIQAKYLKGRTIIGVAAGRFHTVLWTREA-VYTMGLNG 311
Query: 430 GTFGAL--GHGDRSSTSVPREVETL 452
G G L +G++ T+ PR+V L
Sbjct: 312 GQLGCLLDPNGEKCVTA-PRQVSAL 335
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 112/250 (44%), Gaps = 34/250 (13%)
Query: 312 TKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHM--VACGEFHTCAVTLSGDL 369
T +++WG+ + LGHG + +P+L+D + S I++ V +FH+ ++ G +
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQV 198
Query: 370 YTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGD 429
YT G G G LG E + +PR V G + G S + HT +T G ++TFG
Sbjct: 199 YTCGHGPG--GRLGHGDEQTCLVPRLVEG-LNGHNCSQVAAAKDHTVVLTEDGCVYTFGL 255
Query: 430 GTFGALG-HGDRSSTSVPREVET--LKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSK 486
F LG SS +VPR+++ LK + + G +HT A T G NG
Sbjct: 256 NIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFHTVLWTREAVYTMGLNG---- 311
Query: 487 KLFTWGDGAEGQLG-----HGD---AEPRVVPLCVKVSDDISFCKVACGHSITIALTATG 538
GQLG +G+ PR V DI+ VA T+ +T G
Sbjct: 312 ----------GQLGCLLDPNGEKCVTAPRQV--SALHHKDIALSLVAASDGATVCVTTRG 359
Query: 539 QVFSMGSADY 548
++ + ADY
Sbjct: 360 DIYLL--ADY 367
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 119/256 (46%), Gaps = 24/256 (9%)
Query: 419 TSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTS 478
T ++T+GD T LGHG ++S P EL + + G++ I +V
Sbjct: 139 TDPTDVYTWGDNTNFTLGHGSQNSKHHP-------ELVDLFSRSGIY----IKQVVLCKF 187
Query: 479 GSNGLSSK-KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
S LS K +++T G G G+LGHGD + +VP V+ + + +VA T+ LT
Sbjct: 188 HSVFLSQKGQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGHNCSQVAAAKDHTVVLTED 247
Query: 538 GQVFSMGSADYGQLG--SPGSTGKFPTRIEGN-IKHRYIEDIACGSYHIAVVSSKSEVYT 594
G V++ G + QLG P S+ P +I+ +K R I +A G +H V+ ++ VYT
Sbjct: 248 GCVYTFGLNIFHQLGIIPPPSSCNVPRQIQAKYLKGRTIIGVAAGRFH-TVLWTREAVYT 306
Query: 595 WGKGANGQLGHGDNENKQ----TPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSI---A 647
G GQLG + N + P V AL K + + ++ A +C+ I A
Sbjct: 307 MGLNG-GQLGCLLDPNGEKCVTAPRQVSALHHKDIALSLVAASDGATVCVTTRGDIYLLA 365
Query: 648 DHSICSGCRNQFNFRR 663
D+ Q N ++
Sbjct: 366 DYQCKKMASKQLNLKK 381
>sp|Q54VW7|GACGG_DICDI Rho GTPase-activating protein gacGG OS=Dictyostelium discoideum
GN=gacGG PE=3 SV=1
Length = 1203
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 133/310 (42%), Gaps = 44/310 (14%)
Query: 304 GSKHAVLVTKQGQIFSWGEGSGGKLG-HGVEADVSYPKLIDALNGSNIHMVACGEFHTCA 362
G H++ +T+ G+++ WG+ +L + + P I + + ++CG + A
Sbjct: 42 GYNHSLALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAA 101
Query: 363 VTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAG 422
+ +G LY WG I G+ +E P KV ++G ++ + G H A + +
Sbjct: 102 IMENGLLYVWGTLIEG----GKCTES----PTKVD-LLKG--VTCVSIGINHCAVVADSP 150
Query: 423 K------LFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGK 476
++T+G G LG S T+ PR V TL K + CG TAAIVE
Sbjct: 151 TTPEKRSVYTWGTNRKGQLGVVGDSITNAPRRV-TLGS-KAISVCCGEEFTAAIVE---- 204
Query: 477 TSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALT 535
++F WG Q+ +++ + +P+ + DI +++C + A +
Sbjct: 205 --------GNEVFVWGYNKSRQICSNNSDEIISIPVKPFLGRDI--VELSCTKNYIAARS 254
Query: 536 ATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTW 595
G V GS + FP +I+ I+ + HI V+S K E+++W
Sbjct: 255 GVGNVCVWGSNEQVCRIGDDKFINFPNKIK---------QISASTSHILVLSEKGEIFSW 305
Query: 596 GKGANGQLGH 605
G + QL H
Sbjct: 306 GNSEDNQLSH 315
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 23/163 (14%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRV-VPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGS 545
+L+ WGD QL A + P+ ++V + ++CG + + A+ G ++ G+
Sbjct: 54 ELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAAIMENGLLYVWGT 113
Query: 546 ADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIAC---GSYHIAVVS------SKSEVYTWG 596
G G + PT+++ ++ + C G H AVV+ K VYTWG
Sbjct: 114 LIEG-----GKCTESPTKVD------LLKGVTCVSIGINHCAVVADSPTTPEKRSVYTWG 162
Query: 597 KGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAIC 639
GQLG + P V L K + SV CG FTAAI
Sbjct: 163 TNRKGQLGVVGDSITNAPRRV-TLGSKAI-SVCCGEEFTAAIV 203
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 116/286 (40%), Gaps = 60/286 (20%)
Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
G+++ WG+ + L I+S D+ P ++ +SI+CG + +
Sbjct: 53 GELYGWGDNRHHQLSSNKA----ITSIDK-----PIKIQVIPNQRVKSISCGGNFSAAIM 103
Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSG----- 367
+ G ++ WG G G E+ P +D L G + V+ G H CAV
Sbjct: 104 ENGLLYVWGTLIEG--GKCTES----PTKVDLLKG--VTCVSIGINH-CAVVADSPTTPE 154
Query: 368 --DLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLF 425
+YTWG + G LG V + PR+V+ G + S+CCG TAAI ++F
Sbjct: 155 KRSVYTWGT--NRKGQLGVVGDSITNAPRRVTL---GSKAISVCCGEEFTAAIVEGNEVF 209
Query: 426 TFG-DGTFGALGHGDRSSTSVP------REVETLKELKTVMAS------CGVW------- 465
+G + + + S+P R++ L K +A+ VW
Sbjct: 210 VWGYNKSRQICSNNSDEIISIPVKPFLGRDIVELSCTKNYIAARSGVGNVCVWGSNEQVC 269
Query: 466 ---------HTAAIVEVAGKTSGSNGLSSK-KLFTWGDGAEGQLGH 501
I +++ TS LS K ++F+WG+ + QL H
Sbjct: 270 RIGDDKFINFPNKIKQISASTSHILVLSEKGEIFSWGNSEDNQLSH 315
Score = 37.4 bits (85), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 579 GSYHIAVVSSKSEVYTWGKGANGQLGHGDN-ENKQTPTLVEALRDKQVKSVVCGSNFTAA 637
G H ++ E+Y WG + QL + P ++ + +++VKS+ CG NF+AA
Sbjct: 42 GYNHSLALTETGELYGWGDNRHHQLSSNKAITSIDKPIKIQVIPNQRVKSISCGGNFSAA 101
Query: 638 I 638
I
Sbjct: 102 I 102
Score = 33.1 bits (74), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 10/36 (27%), Positives = 23/36 (63%)
Query: 299 QSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEA 334
+ I+ + H ++++++G+IFSWG +L H ++
Sbjct: 284 KQISASTSHILVLSEKGEIFSWGNSEDNQLSHKLDV 319
>sp|P0C5Y8|ALS2_RAT Alsin OS=Rattus norvegicus GN=Als2 PE=2 SV=1
Length = 1651
Score = 77.0 bits (188), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 20/126 (15%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
+++TWG G EGQLGHGD PR+ PLCVK D + G S ++ALTA QV+S GS
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSN 580
Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
+GQLG +FPT + ++ VSS+S V++ G L
Sbjct: 581 TFGQLGH----SEFPTTVP----------------RLSKVSSESGVWSVAAGHGYSLFLV 620
Query: 607 DNENKQ 612
D E+ Q
Sbjct: 621 DTEDFQ 626
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 11/177 (6%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
A G KH VL+T+ G+++S+G E S P L AL G ++ VA G FH+
Sbjct: 47 ALGVKHGVLLTEDGEVYSFGTLPWKS--EAAEICPSSPLLESALVGHHVVTVATGSFHSG 104
Query: 362 AVTLSGDLYTWGD------GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
AVT SG +Y WG+ + N + + S +S I + + ++I + CG HT
Sbjct: 105 AVTESGVVYMWGENAAGQCAVANQQYVSEPSPVS--ISDSETSPLLAVRILQLACGEEHT 162
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
A++ + +++ +G G L T P++VE L + +CG +H+ A+V+
Sbjct: 163 LALSISREIWAWGTGCQLGLITTTFPVTK-PQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 12/139 (8%)
Query: 289 VLESTVV-LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLI----- 342
+LES +V ++A GS H+ VT+ G ++ WGE + G+ + VS P +
Sbjct: 83 LLESALVGHHVVTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDS 142
Query: 343 --DALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM 400
L I +ACGE HT A+++S +++ WG G LGL+ ++ P+KV +
Sbjct: 143 ETSPLLAVRILQLACGEEHTLALSISREIWAWGTGCQ-LGLITTTFPVTK--PQKVE-HL 198
Query: 401 EGLQISSICCGPWHTAAIT 419
G + + CG +H+ A+
Sbjct: 199 AGRVVLQVACGAFHSLALV 217
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
+V TVVL G A+L + + ++++WG+G G+LGHG P + L+G
Sbjct: 495 RVKTRTVVLTP--TYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDG 552
Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR--KVSGQ 399
+ + G H+ A+T +Y+WG + G LG SE +PR KVS +
Sbjct: 553 KEVIHLEAGGSHSLALTAKSQVYSWGS--NTFGQLGH-SEFPTTVPRLSKVSSE 603
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 13/115 (11%)
Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
+++T+G G G LGHGD P V+ L + + G H+ A+
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALT----------- 569
Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
+ ++++WG GQLGH + P VP KVS + VA GH ++ L T
Sbjct: 570 -AKSQVYSWGSNTFGQLGHSEF-PTTVPRLSKVSSESGVWSVAAGHGYSLFLVDT 622
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 29/184 (15%)
Query: 414 HTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEV 473
H +T G++++FG T S P L V + G +H+ A+ E
Sbjct: 52 HGVLLTEDGEVYSFG--TLPWKSEAAEICPSSPLLESALVGHHVVTVATGSFHSGAVTE- 108
Query: 474 AGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD-------ISFCKVAC 526
S ++ WG+ A GQ + + P V +SD + ++AC
Sbjct: 109 -----------SGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLAVRILQLAC 157
Query: 527 GHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIEGNIKH---RYIEDIACGSYH- 582
G T+AL+ + ++++ G+ QLG +T FP ++H R + +ACG++H
Sbjct: 158 GEEHTLALSISREIWAWGTG--CQLGLITTT--FPVTKPQKVEHLAGRVVLQVACGAFHS 213
Query: 583 IAVV 586
+A+V
Sbjct: 214 LALV 217
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
GE +L +++TWG G G LG + P V ++G ++ + G H+
Sbjct: 509 GEADALLPSLRTEVWTWGKGKE--GQLGHGDVLPRLQPLCVKC-LDGKEVIHLEAGGSHS 565
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA 469
A+T+ +++++G TFG LGH + T+VPR L V + GVW AA
Sbjct: 566 LALTAKSQVYSWGSNTFGQLGHSE-FPTTVPR-------LSKVSSESGVWSVAA 611
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
S ++EV+TWGKG GQLGHGD + P V+ L K+V + G + + A+
Sbjct: 517 SLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLAL 568
Score = 40.8 bits (94), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
+V+ WG+G L G V R L K L+ V+ ++ G H++ +T
Sbjct: 521 EVWTWGKGKEGQLGHGDV-------LPRLQPLCVKCLDGKEVIHLEA---GGSHSLALTA 570
Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDL 369
+ Q++SWG + G+LGH E + P+L + S + VA G ++ + + D
Sbjct: 571 KSQVYSWGSNTFGQLGHS-EFPTTVPRLSKVSSESGVWSVAAGHGYSLFLVDTEDF 625
Score = 40.4 bits (93), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 15/135 (11%)
Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGS---PGSTGKFPTRIEGNIKHRYIEDI 576
+ + A G + LT G+V+S G+ + + P S +E + ++ +
Sbjct: 42 TVLQAALGVKHGVLLTEDGEVYSFGTLPWKSEAAEICPSSP-----LLESALVGHHVVTV 96
Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLV-------EALRDKQVKSVV 629
A GS+H V+ VY WG+ A GQ + + P+ V L ++ +
Sbjct: 97 ATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVSEPSPVSISDSETSPLLAVRILQLA 156
Query: 630 CGSNFTAAICLHKGV 644
CG T A+ + + +
Sbjct: 157 CGEEHTLALSISREI 171
Score = 35.0 bits (79), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 573 IEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQT-PTLVEALRDKQVKSVVCG 631
I +ACG H +S E++ WG G QLG T P VE L + V V CG
Sbjct: 152 ILQLACGEEHTLALSISREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVACG 209
Query: 632 SNFTAAI--CL 640
+ + A+ CL
Sbjct: 210 AFHSLALVQCL 220
>sp|Q920R0|ALS2_MOUSE Alsin OS=Mus musculus GN=Als2 PE=1 SV=3
Length = 1651
Score = 76.6 bits (187), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 66/126 (52%), Gaps = 20/126 (15%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSA 546
+++TWG G EGQLGHGD PR+ PLCVK D + G S ++ALTA QV+S GS
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALTAKSQVYSWGSN 580
Query: 547 DYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHG 606
+GQLG +FPT + ++ VSS++ V++ G + L
Sbjct: 581 TFGQLGH----SEFPTTVP----------------RLSKVSSENGVWSVAAGQDYSLFLV 620
Query: 607 DNENKQ 612
D E+ Q
Sbjct: 621 DTEDFQ 626
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
A G +H VL+T+ G+++S+G E S P L AL G ++ VA G FH+
Sbjct: 47 ALGVRHGVLLTEDGEVYSFGTLPWKS--ESAEICPSSPLLESALVGHHVITVATGSFHSG 104
Query: 362 AVTLSGDLYTWGD------GIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
AVT SG +Y WG+ + N + + S +S I + ++I + CG HT
Sbjct: 105 AVTESGVVYMWGENAAGQCAVANQQYVPEPSPVS--ISDSETSPSLAVRILQLACGEEHT 162
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVE 472
A++ + +++ +G G L T P++VE L + +CG +H+ A+V+
Sbjct: 163 LALSLSREIWAWGTGCQLGLITTTFPVTK-PQKVEHLAGRVVLQVACGAFHSLALVQ 218
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 12/139 (8%)
Query: 289 VLESTVV-LDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
+LES +V ++A GS H+ VT+ G ++ WGE + G+ + V P + +
Sbjct: 83 LLESALVGHHVITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDS 142
Query: 348 SN-------IHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQM 400
I +ACGE HT A++LS +++ WG G LGL+ ++ P+KV +
Sbjct: 143 ETSPSLAVRILQLACGEEHTLALSLSREIWAWGTGCQ-LGLITTTFPVTK--PQKVE-HL 198
Query: 401 EGLQISSICCGPWHTAAIT 419
G + + CG +H+ A+
Sbjct: 199 AGRVVLQVACGAFHSLALV 217
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 7/114 (6%)
Query: 288 KVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNG 347
+V TVVL G A+L + + ++++WG+G G+LGHG P + L+G
Sbjct: 495 RVKTRTVVLTP--TYSGEADALLPSLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDG 552
Query: 348 SNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPR--KVSGQ 399
+ + G H+ A+T +Y+WG + G LG SE +PR KVS +
Sbjct: 553 KEVIHLEAGGSHSLALTAKSQVYSWGS--NTFGQLGH-SEFPTTVPRLSKVSSE 603
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 30/205 (14%)
Query: 393 PRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETL 452
P ++ G G + G H +T G++++FG T S P L
Sbjct: 32 PERLPG-WGGKTVLQAALGVRHGVLLTEDGEVYSFG--TLPWKSESAEICPSSPLLESAL 88
Query: 453 KELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLC 512
+ + G +H+ A+ E S ++ WG+ A GQ + + P
Sbjct: 89 VGHHVITVATGSFHSGAVTE------------SGVVYMWGENAAGQCAVANQQYVPEPSP 136
Query: 513 VKVSDD-------ISFCKVACGHSITIALTATGQVFSMGSADYGQLGSPGSTGKFPTRIE 565
V +SD + ++ACG T+AL+ + ++++ G+ QLG +T FP
Sbjct: 137 VSISDSETSPSLAVRILQLACGEEHTLALSLSREIWAWGTG--CQLGLITTT--FPVTKP 192
Query: 566 GNIKH---RYIEDIACGSYH-IAVV 586
++H R + +ACG++H +A+V
Sbjct: 193 QKVEHLAGRVVLQVACGAFHSLALV 217
Score = 46.6 bits (109), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 13/115 (11%)
Query: 423 KLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG 482
+++T+G G G LGHGD P V+ L + + G H+ A+
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLALT----------- 569
Query: 483 LSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTAT 537
+ ++++WG GQLGH + P VP KVS + VA G ++ L T
Sbjct: 570 -AKSQVYSWGSNTFGQLGHSEF-PTTVPRLSKVSSENGVWSVAAGQDYSLFLVDT 622
Score = 46.6 bits (109), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Query: 356 GEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHT 415
GE +L +++TWG G G LG + P V ++G ++ + G H+
Sbjct: 509 GEADALLPSLRTEVWTWGKGKE--GQLGHGDVLPRLQPLCVKC-LDGKEVIHLEAGGSHS 565
Query: 416 AAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAA 469
A+T+ +++++G TFG LGH + T+VPR L V + GVW AA
Sbjct: 566 LALTAKSQVYSWGSNTFGQLGHSE-FPTTVPR-------LSKVSSENGVWSVAA 611
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 587 SSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAI 638
S ++EV+TWGKG GQLGHGD + P V+ L K+V + G + + A+
Sbjct: 517 SLRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIHLEAGGSHSLAL 568
Score = 39.7 bits (91), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 17/136 (12%)
Query: 520 SFCKVACGHSITIALTATGQVFSMGSADYGQLGS---PGSTGKFPTRIEGNIKHRYIEDI 576
+ + A G + LT G+V+S G+ + + P S +E + ++ +
Sbjct: 42 TVLQAALGVRHGVLLTEDGEVYSFGTLPWKSESAEICPSSP-----LLESALVGHHVITV 96
Query: 577 ACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQ--------VKSV 628
A GS+H V+ VY WG+ A GQ + + P+ V ++ D + + +
Sbjct: 97 ATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPV-SISDSETSPSLAVRILQL 155
Query: 629 VCGSNFTAAICLHKGV 644
CG T A+ L + +
Sbjct: 156 ACGEEHTLALSLSREI 171
Score = 35.4 bits (80), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 53/130 (40%), Gaps = 18/130 (13%)
Query: 524 VACGHSITIALTATGQVFSMGSADYGQLG----------SPGSTGKFPTRIEGNIKHRYI 573
VA G + A+T +G V+ G GQ SP S T ++ I
Sbjct: 96 VATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVSISDSETSPSLAVR---I 152
Query: 574 EDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQT-PTLVEALRDKQVKSVVCGS 632
+ACG H +S E++ WG G QLG T P VE L + V V CG+
Sbjct: 153 LQLACGEEHTLALSLSREIWAWGTGC--QLGLITTTFPVTKPQKVEHLAGRVVLQVACGA 210
Query: 633 NFTAAI--CL 640
+ A+ CL
Sbjct: 211 FHSLALVQCL 220
>sp|Q6NRS1|IBTK_XENLA Inhibitor of Bruton tyrosine kinase OS=Xenopus laevis GN=ibtk PE=2
SV=1
Length = 1339
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 106/226 (46%), Gaps = 18/226 (7%)
Query: 254 DVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTK 313
+++ WG+ + L G + + L ++ + V Q + C H+V +++
Sbjct: 144 ELYTWGDNVNFTLGHG-------TQQSKHHPELVEMFPRSGVYIKQMVLCKF-HSVFLSQ 195
Query: 314 QGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWG 373
+GQ+++ G G GG+LGHG E P+L++ L G VA + HT +T G +YT+G
Sbjct: 196 KGQVYTCGHGQGGRLGHGDELTCLVPRLVEGLRGHPCTQVAGAKDHTVVLTEDGYVYTFG 255
Query: 374 -DGIHNLGLLGQVSEISHWIPRKVSGQ-MEGLQISSICCGPWHTAAITSAGKLFTFG--D 429
+ H LG+ Q + +PR++ + M+G + + G +HT T ++T G
Sbjct: 256 LNTFHQLGI--QPPPPNSNVPRQIQAKTMKGKTVLGVAAGRFHTVLWTKDA-VYTVGLNG 312
Query: 430 GTFGALGHGD-RSSTSVPREVETL--KELKTVMASCGVWHTAAIVE 472
G G L + S PR+V L K++ + S T + E
Sbjct: 313 GQLGYLQDPNGEKFVSCPRQVSALHHKDINITLVSASDGATVCVSE 358
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 572 YIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEALRDKQVKSVVCG 631
YI+ + +H +S K +VYT G G G+LGHGD P LVE LR V
Sbjct: 179 YIKQMVLCKFHSVFLSQKGQVYTCGHGQGGRLGHGDELTCLVPRLVEGLRGHPCTQVAGA 238
Query: 632 SNFTAAI 638
+ T +
Sbjct: 239 KDHTVVL 245
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 68/161 (42%), Gaps = 17/161 (10%)
Query: 487 KLFTWGDGAEGQLGHGDAEPRVVPLCVKVS-------DDISFCKVACGHSITIALTATGQ 539
+L+TWGD LGHG + + P V++ + CK HS+ L+ GQ
Sbjct: 144 ELYTWGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLCKF---HSV--FLSQKGQ 198
Query: 540 VFSMGSADYGQLGSPGS-TGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKG 598
V++ G G+LG T P +EG H + +A H V++ VYT+G
Sbjct: 199 VYTCGHGQGGRLGHGDELTCLVPRLVEGLRGHPCTQ-VAGAKDHTVVLTEDGYVYTFGLN 257
Query: 599 ANGQLG-HGDNENKQTPTLVEA--LRDKQVKSVVCGSNFTA 636
QLG N P ++A ++ K V V G T
Sbjct: 258 TFHQLGIQPPPPNSNVPRQIQAKTMKGKTVLGVAAGRFHTV 298
Score = 39.7 bits (91), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 582 HIAV-VSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEAL 620
HI S +E+YTWG N LGHG ++K P LVE
Sbjct: 134 HIVFKTSDPTELYTWGDNVNFTLGHGTQQSKHHPELVEMF 173
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.130 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 329,723,424
Number of Sequences: 539616
Number of extensions: 14164136
Number of successful extensions: 37322
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 162
Number of HSP's that attempted gapping in prelim test: 34919
Number of HSP's gapped (non-prelim): 1104
length of query: 902
length of database: 191,569,459
effective HSP length: 127
effective length of query: 775
effective length of database: 123,038,227
effective search space: 95354625925
effective search space used: 95354625925
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 66 (30.0 bits)