Query         002605
Match_columns 901
No_of_seqs    184 out of 251
Neff          3.9 
Searched_HMMs 29240
Date          Tue Mar 26 16:25:54 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m/002605.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1323-1327//hhsearch_pdb/002605hhsearch_pdb 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3tgh_A Glideosome-associated p   1.0       1       1  217.4  15.3  213  379-641     1-257 (342)
  2 1xzw_A Purple acid phosphatase   1.0       1       1  195.9  16.5  214  378-641   123-365 (426)
  3 2qfp_A Purple acid phosphatase   1.0       1       1  185.8  14.7  214  378-641   116-358 (424)
  4 1ute_A Protein (II purple acid   1.0       1       1  176.5  11.9  213  378-640     3-245 (313)
  5 2nxf_A Putative dimetal phosph   1.0       1       1  136.1  12.2  215  378-637     2-286 (322)
  6 2xmo_A LMO2642 protein; phosph   1.0       1       1  128.9  17.8  198  377-618    35-289 (443)
  7 3d03_A Phosphohydrolase; glyce   1.0       1       1  125.8  16.2  168  421-638    40-216 (274)
  8 2yeq_A Apased, PHOD, alkaline    1.0       1       1  125.2  19.7  201  379-620   114-390 (527)
  9 3ib7_A ICC protein; metallopho   1.0       1       1  124.7  19.3  204  377-639    21-241 (330)
 10 1uf3_A Hypothetical protein TT   1.0       1       1   90.9   9.9  176  380-612     4-190 (228)

No 1  
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=1.00  E-value=1  Score=217.40  Aligned_cols=213  Identities=14%  Similarity=0.096  Sum_probs=149.8

Q ss_pred             CCCEEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCHHHHCCCCC
Q ss_conf             98738999831598999721799984362211236888755567329999166557688812232002442033119999
Q 002605          379 KEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPP  458 (901)
Q Consensus       379 ~~~lwFd~VaDtGDG~dStYsVArLlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~gs~e~Y~~Rf~~PYe~Al~~~~  458 (901)
                      +..+.|.++||+|.|...+..||..|++...+          .++||+|++||++|. |.......+|.+.|+..+..  
T Consensus         1 ~~~l~f~~igD~g~g~~~q~~va~~m~~~~~~----------~~pd~vl~~GD~~y~-G~~~~~d~~~~~~f~~~~~~--   67 (342)
T 3tgh_A            1 KCQLRFASLGDWGKDTKGQILNAKYFKQFIKN----------ERVTFIVSPGSNFID-GVKGLNDPAWKNLYEDVYSE--   67 (342)
T ss_dssp             CCCEEEEECCSCBSCCHHHHHHHHHHHHHHHH----------TTCCEEEECSCSBTT-CCCSTTCTHHHHHTTTTSCC--
T ss_pred             CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHH----------CCCCEEEECCCCCCC-CCCCCCCHHHHHHHHHHHHH--
T ss_conf             95599999964899980389999999999865----------699899988873068-97767507899999998640--


Q ss_pred             CCCCCCCCCCCCCCCCCCCCC-CCCCCCCEEEECCCCCCCCCHHHHHHHHH----C------------CCCCCCCCCCCC
Q ss_conf             986564434799999998665-56899909980789888999678999751----1------------357795346887
Q 002605          459 WYKKDHVAVNKPEVPSGVPEL-KQYDGPQCYIIPGNHDWFDGLNTFMRFIC----H------------KSWLGGWFMPQK  521 (901)
Q Consensus       459 ~~~p~~ia~~~pe~p~~~~~l-~~~~~P~ifAIPGNHDWYDGL~aF~R~Fc----~------------r~~lgGW~mPQ~  521 (901)
                                          + .....| +|+|||||||+++..++..+..    .            +.....|.||.+
T Consensus        68 --------------------~~~~~~~P-~~~vlGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~~  126 (342)
T 3tgh_A           68 --------------------EKGDMYMP-FFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPNY  126 (342)
T ss_dssp             --------------------GGGTTCSE-EEECCCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSSS
T ss_pred             --------------------HHHHHCCC-EEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             --------------------04652898-899688775679946751033302433332111000124567997407862


Q ss_pred             CCEEEEE----CC---------C---EEEEEEEECCCCCC----------CCHHHHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf             6138998----79---------9---08999981577889----------897899999999872309999189982479
Q 002605          522 KSYFALQ----LP---------K---GWWVFGLDLALHCD----------IDVYQFKFFAELVKEQVGERDSVIIMTHEP  575 (901)
Q Consensus       522 ~SYFAlk----LP---------~---~WWLiGLDsql~gd----------ID~~Q~~wFeell~~~v~~~d~VIL~tHeP  575 (901)
                        ||++.    ++         +   .+.++.|||+....          ....|++|+++.+++    .+|+|++.|||
T Consensus       127 --yY~~~~~f~~~~~~~~~~~g~~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~----~~~~IV~~HhP  200 (342)
T 3tgh_A          127 --WYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI----ADFIIVVGDQP  200 (342)
T ss_dssp             --SEEEEEEEEEC---------CEEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH----CSEEEEECSSC
T ss_pred             --EEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC----CCCEEEEECCC
T ss_conf             --078888763056642124577774699999967000467765554667799999999986210----88089998988


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHH-CCCEEEEECCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCC
Q ss_conf             876544467653033789886430-895159983866896502205999995343299955999878
Q 002605          576 NWLLDWYFNNVSGKNVKHLICDYL-KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAFL  641 (901)
Q Consensus       576 ~w~~d~~~~~~t~d~l~~Lie~~l-~~RV~LvLAGHiHHYsRy~~~~~~G~~~~~~lIVsGGGGAfL  641 (901)
                      .|..+.+.+.   ..+...+++++ +++|+++|+||+|.|+|..+.       ++++||+|+||...
T Consensus       201 ~~~~~~~~~~---~~l~~~l~~ll~~~~VdlvlsGH~H~~~~~~~~-------g~~~iv~Ga~g~~~  257 (342)
T 3tgh_A          201 IYSSGYSRGS---SYLAYYLLPLLKDAEVDLYISGHDNNMEVIEDN-------DMAHITCGSGSMSQ  257 (342)
T ss_dssp             SSCSSTTCCC---HHHHHHTHHHHHHTTCCEEEECSSSSEEEEEET-------TEEEEEECCSSCCC
T ss_pred             CCCCCCCCCC---HHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEC-------CCEEEEECCCCCCC
T ss_conf             7777877876---899999999999809979997887644687609-------94899969450235


No 2  
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=1.00  E-value=1  Score=195.95  Aligned_cols=214  Identities=17%  Similarity=0.217  Sum_probs=139.9

Q ss_pred             CCCCEEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCHHHHCCCC
Q ss_conf             89873899983159899972179998436221123688875556732999916655768881223200244203311999
Q 002605          378 EKEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPP  457 (901)
Q Consensus       378 ~~~~lwFd~VaDtGDG~dStYsVArLlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~gs~e~Y~~Rf~~PYe~Al~~~  457 (901)
                      +++++.|.+++|+|.+.++..+++.+.++             .+++|+++++||++|..+.......++ .-|...+++ 
T Consensus       123 ~~~~~~f~~~gD~~~~~~~~~~l~~i~~~-------------~~~~D~vl~~GD~~y~~~~~~~~~~~~-~~~~~~l~~-  187 (426)
T 1xzw_A          123 PDVPYVFGLIGDIGQTHDSNTTLTHYEQN-------------SAKGQAVLFMGDLSYSNRWPNHDNNRW-DTWGRFSER-  187 (426)
T ss_dssp             TTCCEEEEEECSCTTBHHHHHHHHHHHHC-------------TTCCSEEEECSCCCCGGGSGGGCTHHH-HHHHHHHHH-
T ss_pred             CCCCEEEEEEEECCCCCCHHHHHHHHHHC-------------CCCCCEEEECCCHHHCCCCCCCCCHHH-HHHHHHHHH-
T ss_conf             98875999998578887568999999837-------------788778996787431256775532489-999999888-


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCH--------HHHHHHHHCCCCCCCCCCCC------CCC
Q ss_conf             9986564434799999998665568999099807898889996--------78999751135779534688------761
Q 002605          458 PWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGL--------NTFMRFICHKSWLGGWFMPQ------KKS  523 (901)
Q Consensus       458 ~~~~p~~ia~~~pe~p~~~~~l~~~~~P~ifAIPGNHDWYDGL--------~aF~R~Fc~r~~lgGW~mPQ------~~S  523 (901)
                                           +.. ..| +++++||||+..+.        ..|.+.         |.||.      ...
T Consensus       188 ---------------------l~~-~~P-~~~v~GNHD~~~~~~~~~~~~~~~~~~~---------f~~p~~~~~~~~~~  235 (426)
T 1xzw_A          188 ---------------------SVA-YQP-WIWTAGNHEIDYAPDIGEYQPFVPFTNR---------YPTPHEASGSGDPL  235 (426)
T ss_dssp             ---------------------HHT-TSC-EECCCCGGGCCCBGGGTBCSTTHHHHHH---------SCCCCGGGTCSSTT
T ss_pred             ---------------------HHH-CCC-EEEECCCCCCCCCCCCCCCCCCHHHEEE---------EECCCCCCCCCCCC
T ss_conf             ---------------------872-599-7993656566568765666677402578---------75886557888887


Q ss_pred             EEEEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHC--CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH-C
Q ss_conf             389987990899998157788989789999999987230--9999189982479876544467653033789886430-8
Q 002605          524 YFALQLPKGWWVFGLDLALHCDIDVYQFKFFAELVKEQV--GERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYL-K  600 (901)
Q Consensus       524 YFAlkLP~~WWLiGLDsql~gdID~~Q~~wFeell~~~v--~~~d~VIL~tHeP~w~~d~~~~~~t~d~l~~Lie~~l-~  600 (901)
                      ||+++.+. +++++||+........+|++|+++.+++ .  ...+|+|+++|+|.|..+..+.... ..++..+++++ +
T Consensus       236 ~ys~~~g~-~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~-~~~~~~~w~Iv~~H~P~~~~~~~~~~~~-~~~r~~l~~ll~~  312 (426)
T 1xzw_A          236 WYAIKRAS-AHIIVLSSYSGFVKYSPQYKWFTSELEK-VNRSETPWLIVLVHAPLYNSYEAHYMEG-EAMRAIFEPYFVY  312 (426)
T ss_dssp             SEEEEETT-EEEEECCTTSCCSTTSHHHHHHHHHHHH-CCTTTCCEEEEECSSCSSCCBSTTTTTT-HHHHHHHHHHHHH
T ss_pred             EEEEEECC-EEEEEEECCCCCCCCHHHHHHHHHHHHH-HHHCCCCEEEEEECCCCEECCCCCCCCC-HHHHHHHHHHHHH
T ss_conf             69999799-9999961754678877999999999875-1103898899994668404787556778-8999999999998


Q ss_pred             CCEEEEECCCCCCCCEEEECCCC------C------CCCCCEEEEECCCCCCC
Q ss_conf             95159983866896502205999------9------95343299955999878
Q 002605          601 GRCKLRIAGDMHHYMRHSYVPSD------G------PVYVQHLLVNGCGGAFL  641 (901)
Q Consensus       601 ~RV~LvLAGHiHHYsRy~~~~~~------G------~~~~~~lIVsGGGGAfL  641 (901)
                      ++|+++|+||+|.|+|..+..+.      |      ...++.+||+|+||+..
T Consensus       313 ~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~~~~~g~~yi~~G~gG~~~  365 (426)
T 1xzw_A          313 YKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSE  365 (426)
T ss_dssp             TTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCEECTTSCEEEEECCSCCTT
T ss_pred             HCCCEEEECCHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
T ss_conf             29979997671101133000076112347853224699843899968875545


No 3  
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=1.00  E-value=1  Score=185.83  Aligned_cols=214  Identities=16%  Similarity=0.202  Sum_probs=134.9

Q ss_pred             CCCCEEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCHHHHCCCC
Q ss_conf             89873899983159899972179998436221123688875556732999916655768881223200244203311999
Q 002605          378 EKEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPP  457 (901)
Q Consensus       378 ~~~~lwFd~VaDtGDG~dStYsVArLlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~gs~e~Y~~Rf~~PYe~Al~~~  457 (901)
                      +++++.|.+++|+|.+.++..+++.+.++             .+++|+++++||++|..+....-..++ +-|...+.+ 
T Consensus       116 ~~~~~~f~~igD~~~~~~~~~~l~~~~~~-------------~~~~D~vl~~GDl~y~~~~~~~~~~~~-~~~~~~l~~-  180 (424)
T 2qfp_A          116 LDVPYTFGLIGDLGQSFDSNTTLSHYELS-------------PKKGQTVLFVGDLSYADRYPNHDNVRW-DTWGRFTER-  180 (424)
T ss_dssp             TTCCEEEEEECSCTTBHHHHHHHHHHHTC-------------SSCCCEEEECSCCSCGGGSGGGCTHHH-HHHHHHHHH-
T ss_pred             CCCCEEEEEEEECCCCCCHHHHHHHHHHC-------------CCCCCEEEECCCCCCCCCCCCCCCHHH-HHHHHHHHH-
T ss_conf             98875999998079877768999999847-------------778878998086023354554551379-999999999-


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCH--------HHHHHHHHCCCCCCCCCCCC------CCC
Q ss_conf             9986564434799999998665568999099807898889996--------78999751135779534688------761
Q 002605          458 PWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGL--------NTFMRFICHKSWLGGWFMPQ------KKS  523 (901)
Q Consensus       458 ~~~~p~~ia~~~pe~p~~~~~l~~~~~P~ifAIPGNHDWYDGL--------~aF~R~Fc~r~~lgGW~mPQ------~~S  523 (901)
                                           +.. ..| +++++||||+....        ..|...         |.+|.      ...
T Consensus       181 ---------------------~~~-~~P-~~~v~GNHD~~~~~~~~~~~~~~~~~~~---------f~~P~~~~~~~~~~  228 (424)
T 2qfp_A          181 ---------------------SVA-YQP-WIWTAGNHEIEFAPEINETEPFKPFSYR---------YHVPYEASQSTSPF  228 (424)
T ss_dssp             ---------------------HHT-TSC-EEECCCHHHHCCBGGGTBCSTTHHHHHH---------CCCCGGGGTCSSTT
T ss_pred             ---------------------HHH-CCC-EEEECCCCCCCCCCCCCCCCCCHHHHHH---------CCCCCCCCCCCCCC
T ss_conf             ---------------------984-597-5761577643367765556564535501---------03875556788885


Q ss_pred             EEEEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCC--CCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH-C
Q ss_conf             3899879908999981577889897899999999872309--999189982479876544467653033789886430-8
Q 002605          524 YFALQLPKGWWVFGLDLALHCDIDVYQFKFFAELVKEQVG--ERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYL-K  600 (901)
Q Consensus       524 YFAlkLP~~WWLiGLDsql~gdID~~Q~~wFeell~~~v~--~~d~VIL~tHeP~w~~d~~~~~~t~d~l~~Lie~~l-~  600 (901)
                      ||+++.+. +++++||+........+|++||++.+++ .+  ..+|+|++.|+|.+..+..+.... ..++..+++++ +
T Consensus       229 ~ys~~~g~-~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~-~~~~~~~~~Iv~~H~P~~~~~~~~~~~~-~~~r~~l~~ll~~  305 (424)
T 2qfp_A          229 WYSIKRAS-AHIIVLSSYSAYGRGTPQYTWLKKELRK-VKRSETPWLIVLMHSPLYNSYNHHFMEG-EAMRTKFEAWFVK  305 (424)
T ss_dssp             SEEEEETT-EEEEECCTTSCCSTTSHHHHHHHHHHHH-CCTTTCCEEEEECSSCSSCCBSTTTTTT-HHHHHHHHHHHHH
T ss_pred             EEEEEECC-EEEEEECCCCCCCCCHHHHHHHHHHHHH-HCCCCCCEEEEEECCCCEECCCCCCCCC-HHHHHHHHHHHHH
T ss_conf             79999898-9999962886678857999999999865-0103899899994747333374234552-7899999999998


Q ss_pred             CCEEEEECCCCCCCCEEEECCCC------C------CCCCCEEEEECCCCCCC
Q ss_conf             95159983866896502205999------9------95343299955999878
Q 002605          601 GRCKLRIAGDMHHYMRHSYVPSD------G------PVYVQHLLVNGCGGAFL  641 (901)
Q Consensus       601 ~RV~LvLAGHiHHYsRy~~~~~~------G------~~~~~~lIVsGGGGAfL  641 (901)
                      ++|+++|+||+|.|+|..+..+.      |      ...++.+||+|+||+..
T Consensus       306 ~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~~~vyi~~G~gg~~~  358 (424)
T 2qfp_A          306 YKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYG  358 (424)
T ss_dssp             TTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCSCTTS
T ss_pred             HCCCEEEECCHHHHHEECCCCCCCEECCCCCCCCCCCCCCCEEEEECCCCCCC
T ss_conf             59969997773233210310176012148842112489874799966787766


No 4  
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=1.00  E-value=1  Score=176.50  Aligned_cols=213  Identities=19%  Similarity=0.273  Sum_probs=136.1

Q ss_pred             CCCCEEEEEEEECCCCCCCC------HHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCHH
Q ss_conf             89873899983159899972------179998436221123688875556732999916655768881223200244203
Q 002605          378 EKEDLWFDFMADTGDGGNSS------YSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFE  451 (901)
Q Consensus       378 ~~~~lwFd~VaDtGDG~dSt------YsVArLlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~gs~e~Y~~Rf~~PYe  451 (901)
                      +++++.|.+++|++.+....      ..++..+++.. +         .+++|++|++||++|..|.......++.+.++
T Consensus         3 ~~~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~-~---------~~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~   72 (313)
T 1ute_A            3 PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTV-K---------TLGADFILSLGDNFYFTGVHDAKDKRFQETFE   72 (313)
T ss_dssp             CCCCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHH-H---------HHCCSEEEECSCCSTTTCCSSTTCTHHHHHTT
T ss_pred             CCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHH-H---------HCCCCEEEECCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             8885699998026899976665703999999999999-7---------66999999788715767888755089999999


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEC-
Q ss_conf             3119999986564434799999998665568-99909980789888999678999751135779534688761389987-
Q 002605          452 YALQPPPWYKKDHVAVNKPEVPSGVPELKQY-DGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYFALQL-  529 (901)
Q Consensus       452 ~Al~~~~~~~p~~ia~~~pe~p~~~~~l~~~-~~P~ifAIPGNHDWYDGL~aF~R~Fc~r~~lgGW~mPQ~~SYFAlkL-  529 (901)
                      ..+..                       ... ..| +++||||||++.+......+...   ...|.+|.  .||+... 
T Consensus        73 ~~~~~-----------------------~~l~~~p-~~~v~GNHD~~~~~~~~~~~~~~---~~~~~~~~--~~y~~~~~  123 (313)
T 1ute_A           73 DVFSD-----------------------PSLRNVP-WHVLAGNHDHLGNVSAQIAYSKI---SKRWNFPS--PYYRLRFK  123 (313)
T ss_dssp             TTSCS-----------------------GGGTTCC-EEECCCHHHHHSCHHHHHHGGGT---STTEECCS--SSEEEEEE
T ss_pred             HHCCC-----------------------HHHCCCC-EEEECCCCCCCCCCCCCCCCCCC---CCCCCCCC--CCEEEEEE
T ss_conf             87082-----------------------5552888-79979877567984101364346---88760765--32689982


Q ss_pred             -C---CEEEEEEEECCC-----------------CCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCC-
Q ss_conf             -9---908999981577-----------------889897899999999872309999189982479876544467653-
Q 002605          530 -P---KGWWVFGLDLAL-----------------HCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVS-  587 (901)
Q Consensus       530 -P---~~WWLiGLDsql-----------------~gdID~~Q~~wFeell~~~v~~~d~VIL~tHeP~w~~d~~~~~~t-  587 (901)
                       |   .++.+++||+..                 .+.+...|++|+++.+++  .+.+++|+++|+|.+..+....... 
T Consensus       124 ~~~~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~~~~~q~~wL~~~L~~--~~~~~~iv~~H~p~~~~~~~~~~~~~  201 (313)
T 1ute_A          124 IPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQLAA--AKEDYVLVAGHYPVWSIAEHGPTHCL  201 (313)
T ss_dssp             CTTSSCEEEEEECCHHHHHCCGGGSTTCSCCSCSCHHHHHHHHHHHHHHHHH--CCCSEEEEECSSCSSCCSSSCCCHHH
T ss_pred             CCCCCCEEEEEEEECHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH--CCCCEEEEEECCCCCCCCCCCCCHHH
T ss_conf             3899966999999786784757531135667765520089999999999974--89972999979787248888980899


Q ss_pred             HHHHHHHHHHHHCCCEEEEECCCCCCCCEEEECCCCCCCCCCEEEEECCCCCC
Q ss_conf             03378988643089515998386689650220599999534329995599987
Q 002605          588 GKNVKHLICDYLKGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGAF  640 (901)
Q Consensus       588 ~d~l~~Lie~~l~~RV~LvLAGHiHHYsRy~~~~~~G~~~~~~lIVsGGGGAf  640 (901)
                      .+.+..+++   +++|+++|+||+|.+++.....      +.++|++|+||..
T Consensus       202 ~~~l~~~l~---~~~v~~~l~GH~H~~~~~~~~~------g~~~i~~gs~~~~  245 (313)
T 1ute_A          202 VKQLLPLLT---THKVTAYLCGHDHNLQYLQDEN------GLGFVLSGAGNFM  245 (313)
T ss_dssp             HHHTHHHHH---HTTCSEEEECSSSSEEEEECTT------CCEEEEECBSSCC
T ss_pred             HHHHHHHHH---HCCCCEEEECCHHHHHHCCCCC------CCEEEEECCCCCC
T ss_conf             999999999---8498699988734544201789------9559997987676


No 5  
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=1.00  E-value=1  Score=136.07  Aligned_cols=215  Identities=13%  Similarity=0.034  Sum_probs=122.8

Q ss_pred             CCCCEEEEEEEECCCCCCCC----------------HHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHH
Q ss_conf             89873899983159899972----------------17999843622112368887555673299991665576888122
Q 002605          378 EKEDLWFDFMADTGDGGNSS----------------YSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFT  441 (901)
Q Consensus       378 ~~~~lwFd~VaDtGDG~dSt----------------YsVArLlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~gs~e~  441 (901)
                      .+..+.|.+++|+--+....                ..+.+++++-           ..+++|+++++||+++.......
T Consensus         2 ~~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~d~vi~~GD~~~~~~~~~~   70 (322)
T 2nxf_A            2 EDPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQW-----------RRERVQCVVQLGDIIDGHNRRRD   70 (322)
T ss_dssp             -CCSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHH-----------HHTTCSEEEECSCCBCTHHHHTT
T ss_pred             CCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-----------HHCCCCEEEECCCCCCCCCCCCH
T ss_conf             9885499998232666457642223424778888999999999999-----------73699899989875588877646


Q ss_pred             HHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC-CHHHHHHHHHCCC----CCCCC
Q ss_conf             320024420331199999865644347999999986655689990998078988899-9678999751135----77953
Q 002605          442 YERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFD-GLNTFMRFICHKS----WLGGW  516 (901)
Q Consensus       442 Y~~Rf~~PYe~Al~~~~~~~p~~ia~~~pe~p~~~~~l~~~~~P~ifAIPGNHDWYD-GL~aF~R~Fc~r~----~lgGW  516 (901)
                      .....++.....+                         +....| ++.+|||||++. +.+.|.+.+....    ...+.
T Consensus        71 ~~~~~~~~~~~~l-------------------------~~~~~p-~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (322)
T 2nxf_A           71 ASDRALDTVMAEL-------------------------DACSVD-VHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGS  124 (322)
T ss_dssp             CHHHHHHHHHHHH-------------------------HTTCSE-EEECCCHHHHHHCCHHHHHTSTTCCCC------CE
T ss_pred             HHHHHHHHHHHHH-------------------------HHCCCC-EEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
T ss_conf             7899999999999-------------------------856986-89966878855389899866517864445655433


Q ss_pred             CCCC-CCCEEEEECCCEEEEEEEECCCC----------------------------------------------CCCCHH
Q ss_conf             4688-76138998799089999815778----------------------------------------------898978
Q 002605          517 FMPQ-KKSYFALQLPKGWWVFGLDLALH----------------------------------------------CDIDVY  549 (901)
Q Consensus       517 ~mPQ-~~SYFAlkLP~~WWLiGLDsql~----------------------------------------------gdID~~  549 (901)
                      .+|. ...||++....++.+++||+...                                              +.+...
T Consensus       125 ~~~~~~~~~y~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~  204 (322)
T 2nxf_A          125 DLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQ  204 (322)
T ss_dssp             ECGGGTCCCEEEEEETTEEEEECCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHH
T ss_pred             CCCCCCCEEEEEECCCCEEEEEECCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf             46789952799852798899998175010123577872567899998632854112458654334333443347864899


Q ss_pred             HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH-CC-CEEEEECCCCCCCCEEEECCCCCCCC
Q ss_conf             99999999872309999189982479876544467653033789886430-89-51599838668965022059999953
Q 002605          550 QFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYL-KG-RCKLRIAGDMHHYMRHSYVPSDGPVY  627 (901)
Q Consensus       550 Q~~wFeell~~~v~~~d~VIL~tHeP~w~~d~~~~~~t~d~l~~Lie~~l-~~-RV~LvLAGHiHHYsRy~~~~~~G~~~  627 (901)
                      |++|+++.+++....+.++|+++|+|.+..+..... ...+...+ .+++ ++ +|+++|+||+|.+++.....      
T Consensus       205 q~~wL~~~L~~~~~~~~~~iv~~H~p~~~~~~~~~~-~~~~~~~~-~~ll~~~~~v~~~~~GH~H~~~~~~~~~------  276 (322)
T 2nxf_A          205 QLQWLDAVLTLSDHKQERVLIFSHLPVHPCAADPIC-LAWNHEAV-LSVLRSHQSVLCFIAGHDHDGGRCTDSS------  276 (322)
T ss_dssp             HHHHHHHHHHHHHHHTCEEEEEESSCCCTTSSCGGG-SCTTHHHH-HHHHHTCTTEEEEEECSCTTCEEEECTT------
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCC-CCCCHHHH-HHHHHCCCCEEEEECCCCCCCCCEECCC------
T ss_conf             999999999877755980899981689888887524-55589999-9998538986899828867898222469------


Q ss_pred             CCEEEEECCC
Q ss_conf             4329995599
Q 002605          628 VQHLLVNGCG  637 (901)
Q Consensus       628 ~~~lIVsGGG  637 (901)
                      +.++|++|+.
T Consensus       277 g~~~i~~~~~  286 (322)
T 2nxf_A          277 GAQHITLEGV  286 (322)
T ss_dssp             SCEEEECCCG
T ss_pred             CCEEEEECCH
T ss_conf             9369981505


No 6  
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=1.00  E-value=1  Score=128.89  Aligned_cols=198  Identities=18%  Similarity=0.233  Sum_probs=115.0

Q ss_pred             CCCCCEEEEEEEECCCCCCC-----------------------CHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCC
Q ss_conf             78987389998315989997-----------------------2179998436221123688875556732999916655
Q 002605          377 SEKEDLWFDFMADTGDGGNS-----------------------SYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLA  433 (901)
Q Consensus       377 ~~~~~lwFd~VaDtGDG~dS-----------------------tYsVArLlAqp~L~v~~~~~~~~lPRgdfLIlgGDlv  433 (901)
                      .++..+.|.+++|+--|...                       .....+++.+-  +         ..++|+++++||++
T Consensus        35 ~~~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~---------~~~~d~vi~~GDl~  103 (443)
T 2xmo_A           35 EKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADV--E---------SKKTDVLIISGDLT  103 (443)
T ss_dssp             CSCCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHH--H---------HHTCSEEEEESCCB
T ss_pred             CCCCCEEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHH--H---------HCCCCEEEECCCCC
T ss_conf             678870799983777777423454123310333334543224799999999999--9---------72999999879989


Q ss_pred             CCCCCHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC--------------
Q ss_conf             768881223200244203311999998656443479999999866556899909980789888999--------------
Q 002605          434 YPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDG--------------  499 (901)
Q Consensus       434 YP~gs~e~Y~~Rf~~PYe~Al~~~~~~~p~~ia~~~pe~p~~~~~l~~~~~P~ifAIPGNHDWYDG--------------  499 (901)
                      ..+ ..++|+. +.+-++.                          +.. .+.++++||||||.+.+              
T Consensus       104 ~~~-~~~~~~~-~~~~l~~--------------------------l~~-~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~  154 (443)
T 2xmo_A          104 NNG-EKTSHEE-LAKKLTQ--------------------------VEK-NGTQVFVVPGNHDINNPWARKFEKDKQLPTD  154 (443)
T ss_dssp             SSC-CHHHHHH-HHHHHHH--------------------------HHH-TTCEEEEECCTTTSSCTTCEEEETTEEEECC
T ss_pred             CCC-CHHHHHH-HHHHHHH--------------------------HHH-CCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             998-7789999-9999999--------------------------986-7984999788689987532224774345535


Q ss_pred             ---HHHHHHHHHCCCCCCCC-CCCCCCCEEEEECCCEEEEEEEECCCC------------CCCCHHHHHHHHHHHHHHCC
Q ss_conf             ---67899975113577953-468876138998799089999815778------------89897899999999872309
Q 002605          500 ---LNTFMRFICHKSWLGGW-FMPQKKSYFALQLPKGWWVFGLDLALH------------CDIDVYQFKFFAELVKEQVG  563 (901)
Q Consensus       500 ---L~aF~R~Fc~r~~lgGW-~mPQ~~SYFAlkLP~~WWLiGLDsql~------------gdID~~Q~~wFeell~~~v~  563 (901)
                         ...|.+.|....+.... ..+...+| .+....++++++||+...            +.++..|++|+++.+++...
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y-~~~~~~~~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~  233 (443)
T 2xmo_A          155 TISPTDFSKIYSDFGYEDAISSDEFSLSY-LAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKK  233 (443)
T ss_dssp             CCCHHHHHHHTCCCCCTTCSEECSSSSCE-EECSBSSEEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHCCHHHHHCCCCCCCEE-EEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             36999999886213714442068888328-99627987999966787676655678776886299999999999999987


Q ss_pred             CCCEEEEEECCCCCCCCCCCCC-CC---HHHHHHHHHHHHCCCEEEEECCCCCCCCEEE
Q ss_conf             9991899824798765444676-53---0337898864308951599838668965022
Q 002605          564 ERDSVIIMTHEPNWLLDWYFNN-VS---GKNVKHLICDYLKGRCKLRIAGDMHHYMRHS  618 (901)
Q Consensus       564 ~~d~VIL~tHeP~w~~d~~~~~-~t---~d~l~~Lie~~l~~RV~LvLAGHiHHYsRy~  618 (901)
                      .+.++|+++|+|.+..+....+ ..   .+.+..++++   ++++++|+||+|......
T Consensus       234 ~~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll~~---~~v~lvl~GH~H~~~~~~  289 (443)
T 2xmo_A          234 NGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTE---GAMDFSLSGHIHTQNIRS  289 (443)
T ss_dssp             TTCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHHHH---TTCCEEEECSSCSCEEEE
T ss_pred             CCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH---CCCEEEEECCCCCCCHHH
T ss_conf             59869999888876456543565434659999999997---698599989866572100


No 7  
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=1.00  E-value=1  Score=125.76  Aligned_cols=168  Identities=16%  Similarity=0.140  Sum_probs=104.6

Q ss_pred             CCCCEEEECCCCCCCCCCHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCH
Q ss_conf             67329999166557688812232002442033119999986564434799999998665568999099807898889996
Q 002605          421 PRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGL  500 (901)
Q Consensus       421 PRgdfLIlgGDlvYP~gs~e~Y~~Rf~~PYe~Al~~~~~~~p~~ia~~~pe~p~~~~~l~~~~~P~ifAIPGNHDWYDGL  500 (901)
                      |++|+++++||+++.. ..++|+     .+...+.                         ....| +++||||||++.. 
T Consensus        40 ~~~d~vi~~GDl~~~~-~~~~~~-----~~~~~l~-------------------------~l~~p-~~~v~GNHD~~~~-   86 (274)
T 3d03_A           40 ERPDAVVVSGDIVNCG-RPEEYQ-----VARQILG-------------------------SLNYP-LYLIPGNHDDKAL-   86 (274)
T ss_dssp             SCCSEEEEESCCBSSC-CHHHHH-----HHHHHHT-------------------------TCSSC-EEEECCTTSCHHH-
T ss_pred             CCCCEEEECCCCCCCC-CHHHHH-----HHHHHHH-------------------------HCCCC-EEEECCCCCCHHH-
T ss_conf             9988899888889999-999999-----9999997-------------------------56997-8997998988799-


Q ss_pred             HHHHHHHHCCCCCCCCCCCC--CCCEEEEECCCEEEEEEEECCC----CCCCCHHHHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf             78999751135779534688--7613899879908999981577----88989789999999987230999918998247
Q 002605          501 NTFMRFICHKSWLGGWFMPQ--KKSYFALQLPKGWWVFGLDLAL----HCDIDVYQFKFFAELVKEQVGERDSVIIMTHE  574 (901)
Q Consensus       501 ~aF~R~Fc~r~~lgGW~mPQ--~~SYFAlkLP~~WWLiGLDsql----~gdID~~Q~~wFeell~~~v~~~d~VIL~tHe  574 (901)
                        +.+.+... |+   ..+.  ...|++++.+. +.+++||+..    .+.+...|++|+++.+++ . +++++|+++|+
T Consensus        87 --~~~~~~~~-~~---~~~~~~~~~~~~~~~~~-~~~i~ld~~~~~~~~~~~~~~~~~wl~~~l~~-~-~~~~~iv~~H~  157 (274)
T 3d03_A           87 --FLEYLQPL-CP---QLGSDANNMRCAVDDFA-TRLLFIDSSRAGTSKGWLTDETISWLEAQLFE-G-GDKPATIFMHH  157 (274)
T ss_dssp             --HHHHHGGG-SG---GGCSCGGGCCEEECSSS-SEEEECCCCCTTCSSBCCCHHHHHHHHHHHHH-H-TTSCEEEEESS
T ss_pred             --HHHHHHHH-HC---CCCCCCCCEEEEEEECC-EEEEEEECCCCCCCCCEECHHHHHHHHHHHHH-C-CCCCEEEEECC
T ss_conf             --99986465-04---76667784579997099-89999858988888875399999999999975-8-99988999898


Q ss_pred             CCCCCCCCCCC-CCHHHHHHHHHHHH-CC-CEEEEECCCCCCCCEEEECCCCCCCCCCEEEEECCCC
Q ss_conf             98765444676-53033789886430-89-5159983866896502205999995343299955999
Q 002605          575 PNWLLDWYFNN-VSGKNVKHLICDYL-KG-RCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGG  638 (901)
Q Consensus       575 P~w~~d~~~~~-~t~d~l~~Lie~~l-~~-RV~LvLAGHiHHYsRy~~~~~~G~~~~~~lIVsGGGG  638 (901)
                      |.+..+....+ ....+...+ .+++ ++ +++++++||+|.++.....   |   . .+++++|.+
T Consensus       158 p~~~~~~~~~~~~~~~~~~~l-~~~l~~~~~v~~vl~GH~H~~~~~~~~---g---~-~~~~~pg~~  216 (274)
T 3d03_A          158 PPLPLGNAQMDPIACENGHRL-LALVERFPSLTRIFCGHNHSLTMTQYR---Q---A-LISTLPGTV  216 (274)
T ss_dssp             CSSCCSCTTTGGGSBTTTHHH-HHHHHHCTTEEEEEECSSSSCEEEEET---T---E-EEEECCCSS
T ss_pred             CCCCCCCCCCCCCCCCCHHHH-HHHHHHCCCCEEEEECCCCCCHHHEEC---C---E-EEEECCCCC
T ss_conf             986569733473137588999-999972999409986877871230599---8---8-999769741


No 8  
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=1.00  E-value=1  Score=125.22  Aligned_cols=201  Identities=11%  Similarity=0.044  Sum_probs=117.1

Q ss_pred             CCCEEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHH------------------
Q ss_conf             98738999831598999721799984362211236888755567329999166557688812------------------
Q 002605          379 KEDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAF------------------  440 (901)
Q Consensus       379 ~~~lwFd~VaDtGDG~dStYsVArLlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~gs~e------------------  440 (901)
                      .+++.|.+++|.|-. +..+++-+.+++              ..+||+|++||.+|.++...                  
T Consensus       114 ~~~~rfa~~sc~~~~-~g~~~~~~~ia~--------------~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~t  178 (527)
T 2yeq_A          114 VPQMTFAFASCQQYE-HGYYTAYKHMAK--------------EKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIIT  178 (527)
T ss_dssp             CCCEEEEEECCCCGG-GCCCHHHHHHTT--------------SCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCS
T ss_pred             CCCEEEEEEECCCCC-CCCCHHHHHHHH--------------CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             887599999069977-786289999985--------------49997992488656788875444566545677410067


Q ss_pred             --HHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCH------------------
Q ss_conf             --232002442033119999986564434799999998665568999099807898889996------------------
Q 002605          441 --TYERRLFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGL------------------  500 (901)
Q Consensus       441 --~Y~~Rf~~PYe~Al~~~~~~~p~~ia~~~pe~p~~~~~l~~~~~P~ifAIPGNHDWYDGL------------------  500 (901)
                        .|+.++    +..+..             |++    +.+. ...| +++|.||||..++-                  
T Consensus       179 l~~yr~~y----~~~~~d-------------p~l----q~~~-a~~P-~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr  235 (527)
T 2yeq_A          179 LQDYRNRH----AQYRSD-------------ANL----KAAH-AAFP-WVVTWDDHEVENNYANKIPEKGQSVEAFVLRR  235 (527)
T ss_dssp             HHHHHHHH----HHHHTC-------------HHH----HHHH-HHSE-EEECCCSTTTSTTCBTTBCSTTCCHHHHHHHH
T ss_pred             HHHHHHHH----HHHHCC-------------HHH----HHHH-HCCC-EEEECCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf             99999999----987189-------------779----9998-6199-89835621244777787633468751089999


Q ss_pred             -HHHHHHHHCCCCCCCCCCC---CCCCEEEEECCCEEEEEEEECCCCC----------------------CCCHHHHHHH
Q ss_conf             -7899975113577953468---8761389987990899998157788----------------------9897899999
Q 002605          501 -NTFMRFICHKSWLGGWFMP---QKKSYFALQLPKGWWVFGLDLALHC----------------------DIDVYQFKFF  554 (901)
Q Consensus       501 -~aF~R~Fc~r~~lgGW~mP---Q~~SYFAlkLP~~WWLiGLDsql~g----------------------dID~~Q~~wF  554 (901)
                       .++..+|.... +....+|   ..+.|++++.+....|+.||+...-                      .++.+|++||
T Consensus       236 ~~A~~ay~e~~P-~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL  314 (527)
T 2yeq_A          236 AAAYQAYYEHMP-LRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWL  314 (527)
T ss_dssp             HHHHHHHHHHSC-CCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHH
T ss_pred             HHHHHHHHHHCC-CCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf             999999998578-8765677777863789997088005999865113666555544344442246876563699999999


Q ss_pred             HHHHHHHCCCCCEEEEEECCCCCCCCCCCCC------C---CH-HHHHHHHHHHHCCCE--EEEECCCCCCCCEEEEC
Q ss_conf             9998723099991899824798765444676------5---30-337898864308951--59983866896502205
Q 002605          555 AELVKEQVGERDSVIIMTHEPNWLLDWYFNN------V---SG-KNVKHLICDYLKGRC--KLRIAGDMHHYMRHSYV  620 (901)
Q Consensus       555 eell~~~v~~~d~VIL~tHeP~w~~d~~~~~------~---t~-d~l~~Lie~~l~~RV--~LvLAGHiHHYsRy~~~  620 (901)
                      ++.+++  .+.+|+||+.|.|.+..+.....      +   .. ...+.|++-+.+.+|  .++|+||+|+|++....
T Consensus       315 ~~~L~~--s~a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~~  390 (527)
T 2yeq_A          315 FNNLGS--STAHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNLH  390 (527)
T ss_dssp             HHHHHH--CCSSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEEE
T ss_pred             HHHHHC--CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCC
T ss_conf             988752--8987699984773015446777655557520120199999999999983999879997536778673211


No 9  
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=1.00  E-value=1  Score=124.69  Aligned_cols=204  Identities=20%  Similarity=0.212  Sum_probs=123.3

Q ss_pred             CCCCCEEEEEEEECCCCCCC---------CHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHH--C
Q ss_conf             78987389998315989997---------217999843622112368887555673299991665576888122320--0
Q 002605          377 SEKEDLWFDFMADTGDGGNS---------SYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYER--R  445 (901)
Q Consensus       377 ~~~~~lwFd~VaDtGDG~dS---------tYsVArLlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~gs~e~Y~~--R  445 (901)
                      .+++++.|.+++|+--+.+.         .....+++.+-. +.        .+++|+++++||++.. +..+.|+.  +
T Consensus        21 ~~~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~-~~--------~~~~d~vi~~GDl~~~-~~~~~~~~~~~   90 (330)
T 3ib7_A           21 HPRPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLN-QS--------GLRPDAIVFTGDLADK-GEPAAYRKLRG   90 (330)
T ss_dssp             SCCCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHH-HH--------TCCCSEEEECSCCBTT-CCHHHHHHHHH
T ss_pred             CCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HC--------CCCCCEEEECCCCCCC-CCHHHHHHHHH
T ss_conf             88987089998478637998652466587999999999999-51--------8998999987888899-99999999999


Q ss_pred             CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEE
Q ss_conf             24420331199999865644347999999986655689990998078988899967899975113577953468876138
Q 002605          446 LFRPFEYALQPPPWYKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFICHKSWLGGWFMPQKKSYF  525 (901)
Q Consensus       446 f~~PYe~Al~~~~~~~p~~ia~~~pe~p~~~~~l~~~~~P~ifAIPGNHDWYDGL~aF~R~Fc~r~~lgGW~mPQ~~SYF  525 (901)
                      +++++..                            ....| +++|+||||+..   .+.+.+.....      .....|+
T Consensus        91 ~l~~l~~----------------------------~~~~p-v~~v~GNHD~~~---~~~~~~~~~~~------~~~~~~~  132 (330)
T 3ib7_A           91 LVEPFAA----------------------------QLGAE-LVWVMGNHDDRA---ELRKFLLDEAP------SMAPLDR  132 (330)
T ss_dssp             HHHHHHH----------------------------HHTCE-EEECCCTTSCHH---HHHHHHHCCCC------CCSCCCE
T ss_pred             HHHHHHH----------------------------HCCCC-EEEECCCCCCHH---HHHHHHCCCCC------CCCCCCE
T ss_conf             9999876----------------------------24997-899689998878---99987402566------5677424


Q ss_pred             EEECCCEEEEEEEECCC----CCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC-CHHHHHHHHHHHH-
Q ss_conf             99879908999981577----88989789999999987230999918998247987654446765-3033789886430-
Q 002605          526 ALQLPKGWWVFGLDLAL----HCDIDVYQFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNV-SGKNVKHLICDYL-  599 (901)
Q Consensus       526 AlkLP~~WWLiGLDsql----~gdID~~Q~~wFeell~~~v~~~d~VIL~tHeP~w~~d~~~~~~-t~d~l~~Lie~~l-  599 (901)
                      .++.+. +.+++||+..    .+.+...|++|+++.+++  .++..+|+++|||.+..+...... ...+...+ .+++ 
T Consensus       133 ~~~~~~-~~~i~lds~~~~~~~~~~~~~q~~wl~~~l~~--~~~~~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l-~~~l~  208 (330)
T 3ib7_A          133 VCMIDG-LRIIVLDTSVPGHHHGEIRASQLGWLAEELAT--PAPDGTILALHHPPIPSVLDMAVTVELRDQAAL-GRVLR  208 (330)
T ss_dssp             EEEETT-EEEEECCCCCTTCCSBCCCHHHHHHHHHHTTS--CCTTCEEEECSSCSSCCSSGGGGGGSBSCHHHH-HHHHT
T ss_pred             EEEECC-EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH--CCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHH-HHHHH
T ss_conf             998499-89999568899987880199999999999975--666885999979977777441233254678999-99985


Q ss_pred             CCCEEEEECCCCCCCCEEEECCCCCCCCCCEEEEECCCCC
Q ss_conf             8951599838668965022059999953432999559998
Q 002605          600 KGRCKLRIAGDMHHYMRHSYVPSDGPVYVQHLLVNGCGGA  639 (901)
Q Consensus       600 ~~RV~LvLAGHiHHYsRy~~~~~~G~~~~~~lIVsGGGGA  639 (901)
                      +++++++++||+|..+.....       +..++++|+.+.
T Consensus       209 ~~~v~~v~~GH~H~~~~~~~~-------g~~~~~~gs~~~  241 (330)
T 3ib7_A          209 GTDVRAILAGHLHYSTNATFV-------GIPVSVASATCY  241 (330)
T ss_dssp             TSSEEEEEECSSSSCEEEEET-------TEEEEECCCSSC
T ss_pred             CCCCEEEEECCCCCCCCCEEC-------CEEEEECCCCEE
T ss_conf             469559998997886652499-------998993495154


No 10 
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=1.00  E-value=1  Score=90.85  Aligned_cols=176  Identities=11%  Similarity=0.041  Sum_probs=91.6

Q ss_pred             CCEEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCHHHHCCCCCC
Q ss_conf             87389998315989997217999843622112368887555673299991665576888122320024420331199999
Q 002605          380 EDLWFDFMADTGDGGNSSYSVARLLAQPHIRVTRDDSVFTLPRGDVLLIGGDLAYPNPSAFTYERRLFRPFEYALQPPPW  459 (901)
Q Consensus       380 ~~lwFd~VaDtGDG~dStYsVArLlAqp~L~v~~~~~~~~lPRgdfLIlgGDlvYP~gs~e~Y~~Rf~~PYe~Al~~~~~  459 (901)
                      ..+.+.+++|+-.+.+   ...+++...  +         ..++|+++++||++......+.+.. +++..         
T Consensus         4 ~~mri~~iSD~H~~~~---~~~~~~~~~--~---------~~~~D~vi~~GDl~~~~~~~~~~~~-~~~~l---------   59 (228)
T 1uf3_A            4 TVRYILATSNPMGDLE---ALEKFVKLA--P---------DTGADAIALIGNLMPKAAKSRDYAA-FFRIL---------   59 (228)
T ss_dssp             CCCEEEEEECCTTCHH---HHHHHHTHH--H---------HHTCSEEEEESCSSCTTCCHHHHHH-HHHHH---------
T ss_pred             CEEEEEEEEECCCCHH---HHHHHHHHH--H---------HCCCCEEEECCCCCCCCCCHHHHHH-HHHHH---------
T ss_conf             1579999950567989---999999987--6---------4699999987887887778799999-99999---------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHH-CCCCCCCCCCCCCCCEEEEECCCEEEEEEE
Q ss_conf             8656443479999999866556899909980789888999678999751-135779534688761389987990899998
Q 002605          460 YKKDHVAVNKPEVPSGVPELKQYDGPQCYIIPGNHDWFDGLNTFMRFIC-HKSWLGGWFMPQKKSYFALQLPKGWWVFGL  538 (901)
Q Consensus       460 ~~p~~ia~~~pe~p~~~~~l~~~~~P~ifAIPGNHDWYDGL~aF~R~Fc-~r~~lgGW~mPQ~~SYFAlkLP~~WWLiGL  538 (901)
                                          +....| +++||||||.+.. +.+.+.+. ...+.+.+....+    .+.++.+++++|+
T Consensus        60 --------------------~~~~~p-v~~v~GNHD~~~~-~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~i~g~  113 (228)
T 1uf3_A           60 --------------------SEAHLP-TAYVPGPQDAPIW-EYLREAANVELVHPEMRNVHET----FTFWRGPYLVAGV  113 (228)
T ss_dssp             --------------------GGGCSC-EEEECCTTSCSHH-HHHHHHHHHHHHCTTEEECBTS----EEEETTTEEEEEE
T ss_pred             --------------------HHCCCC-EEEECCCCCCHHH-HHHHHHHHHHCCCCCEEECCCC----EEEECCCCEEECC
T ss_conf             --------------------862996-8997898973667-7777654331248642874564----4760799479657


Q ss_pred             ECCCCC--CCCHH--------HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEC
Q ss_conf             157788--98978--------99999999872309999189982479876544467653033789886430895159983
Q 002605          539 DLALHC--DIDVY--------QFKFFAELVKEQVGERDSVIIMTHEPNWLLDWYFNNVSGKNVKHLICDYLKGRCKLRIA  608 (901)
Q Consensus       539 Dsql~g--dID~~--------Q~~wFeell~~~v~~~d~VIL~tHeP~w~~d~~~~~~t~d~l~~Lie~~l~~RV~LvLA  608 (901)
                      +.....  .++..        +.+|..+.+++ .. +...|+++|+|++..+....  ..+.+..++++   .+++++++
T Consensus       114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~-~~~~il~~H~p~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~  186 (228)
T 1uf3_A          114 GGEIADEGEPEEHEALRYPAWVAEYRLKALWE-LK-DYPKIFLFHTMPYHKGLNEQ--GSHEVAHLIKT---HNPLLVLV  186 (228)
T ss_dssp             CSEEESSSCCBSSSSCEEEHHHHHHHHGGGGG-SC-SCCEEEEESSCBCBTTTBTT--SBHHHHHHHHH---HCCSEEEE
T ss_pred             CCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHH-CC-CCCEEEEECCCCCCCCCCCC--CHHHHHHHHHH---HCCCEEEE
T ss_conf             98757987637113046303567778999971-77-77869998569546786500--78999999998---49978998


Q ss_pred             CCCC
Q ss_conf             8668
Q 002605          609 GDMH  612 (901)
Q Consensus       609 GHiH  612 (901)
                      ||+|
T Consensus       187 GH~H  190 (228)
T 1uf3_A          187 AGKG  190 (228)
T ss_dssp             CCSS
T ss_pred             CCCC
T ss_conf             3122


Done!