Your job contains 1 sequence.
>002607
MKLEERQIENLLLHSFDCFSSAFMSLAANFPLNSKQKPCHGEEITSVIEEPAEYVLDPED
TIEWKEKMSHQPVCDQGSMTLHGSESSEEREVVSSNNSLESSTSVVSSINESKCKLMNSS
EIYPETYNDVLSSPNSLDSSFAPFADGTISSSNSNSDAGDSSNVPTLNSFNGSNSFVELL
QMVGSTMLHGNYNHRNGHMSSDENSKDEHSQFQTLESNTQRVKVKDIDDPKVLSRVSSIP
PSSFHPCLTQDLSVEVESYEMRREETRSSGISDVTDKIALMPEFASQTTDATKLIVAGPE
APRHGNKQSRNSMQANKNSIAQHESELFGDSRFAMEPPAHAQKNDLNLPKISSGSIDAIE
SHNALYNRENTQLKSSVSDQNKYDHSFSKELNGIDDATSKSKSTRVSKEKQNDFDWDSLR
RQVEANGGKKERPEHTKDSLDWEAVRCADVNKIANTIKERGMNNMLAGRIKDFLNRLVRD
HGSVDLEWLRDVPPDKAKYPVLESIQKYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSK
PNCNACPMRGECRHFASAFASSRLALPGPEEKAIVSANENRTNTQNPAMMINQLPLPLTH
ATDLPVGKLEIAVNNCEPIIEEPATPEPERVQVSENDIEDTFCEDPEEIPTIKLNMKEFT
QTLQNYMQENLELQEGDMSKALVALTAGAASIPAPKLKNVSRLRTEHQVYELPDSHPLLR
GMEKREPDDPGRYLLAIWTPGETANSIQPPESRCSSQEHGKMCDEKTCFSCNSVRESEFQ
IVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLKPINVPREWLWNLPRRTVYFGT
SIPSIFKGLTTEGIQHCFWRGYVCVRGFDQKSRAPRPLMARLHFPASKLNKVPGKADADH
K
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002607
(901 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2044923 - symbol:DML1 "demeter-like 1" species... 1357 3.4e-178 3
TAIR|locus:2184432 - symbol:DME "DEMETER" species:3702 "A... 1424 1.6e-156 3
TAIR|locus:2100138 - symbol:DML2 "demeter-like 2" species... 994 1.9e-140 3
TAIR|locus:2124301 - symbol:DML3 "demeter-like protein 3"... 867 1.0e-90 2
TAIR|locus:4515103342 - symbol:AT4G04957 "AT4G04957" spec... 170 1.3e-11 1
>TAIR|locus:2044923 [details] [associations]
symbol:DML1 "demeter-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA
repair" evidence=IEA;IMP] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0003906 "DNA-(apurinic or apyrimidinic site)
lyase activity" evidence=ISS;IDA] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0019104 "DNA N-glycosylase activity"
evidence=ISS;IDA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006306 "DNA methylation" evidence=RCA;IDA] [GO:0031936
"negative regulation of chromatin silencing" evidence=IMP]
[GO:0080111 "DNA demethylation" evidence=IMP] InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR011257 Pfam:PF00730 PROSITE:PS00764
SMART:SM00478 SMART:SM00525 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 Gene3D:1.10.1670.10
InterPro:IPR023170 GO:GO:0003677 GO:GO:0006281 GO:GO:0006351
GO:GO:0051539 EMBL:AC006919 GO:GO:0080111 GO:GO:0031936
GO:GO:0006342 GO:GO:0006306 GO:GO:0004519 GO:GO:0003906
eggNOG:COG0177 GO:GO:0019104 EMBL:AY286009 IPI:IPI00517101
PIR:D84781 RefSeq:NP_181190.3 UniGene:At.14091
ProteinModelPortal:Q9SJQ6 SMR:Q9SJQ6 STRING:Q9SJQ6 PaxDb:Q9SJQ6
PRIDE:Q9SJQ6 EnsemblPlants:AT2G36490.1 GeneID:818224
KEGG:ath:AT2G36490 TAIR:At2g36490 HOGENOM:HOG000154178
InParanoid:Q9SJQ6 OMA:ANTASLI PhylomeDB:Q9SJQ6
ProtClustDB:CLSN2915131 Genevestigator:Q9SJQ6 GermOnline:AT2G36490
Uniprot:Q9SJQ6
Length = 1393
Score = 1357 (482.7 bits), Expect = 3.4e-178, Sum P(3) = 3.4e-178
Identities = 259/391 (66%), Positives = 298/391 (76%)
Query: 499 YPVLESIQKYLWPRLCKLDQRTLYELHYQMITFGKVFCTKSKPNCNACPMRGECRHXXXX 558
YP+LESIQKYLWPRLCKLDQ+TLYELHYQMITFGKVFCTKSKPNCNACPM+GECRH
Sbjct: 1001 YPMLESIQKYLWPRLCKLDQKTLYELHYQMITFGKVFCTKSKPNCNACPMKGECRHFASA 1060
Query: 559 XXXXRLALPGPEEKAIVSANENRTNTQNPAMMINQLPLPLTHATDLPVGKLEIAVNNCXX 618
RLALP E K + + ++N P + + ++ P K V C
Sbjct: 1061 FASARLALPSTE-KGMGTPDKNPLPLHLPEPFQREQGSEVVQHSE-PAKK----VTCCEP 1114
Query: 619 XXXXXXXXXXXRVQVSENDIEDTFCEDPEEIPTIKLNMKEFTQTLQNYMQENLELQEGDM 678
+VS DIE+ F EDPEEIPTI+LNM FT L+ M+ N ELQ+G+M
Sbjct: 1115 IIEEPASPEPETAEVSIADIEEAFFEDPEEIPTIRLNMDAFTSNLKKIMEHNKELQDGNM 1174
Query: 679 SKALVALTAGAASIPAPKLKNVSRLRTEHQVYELPDSHPLLRGMEKREPDDPGRYLLAIW 738
S ALVALTA AS+P PKLKN+S+LRTEH+VYELPD HPLL +EKREPDDP YLLAIW
Sbjct: 1175 SSALVALTAETASLPMPKLKNISQLRTEHRVYELPDEHPLLAQLEKREPDDPCSYLLAIW 1234
Query: 739 TPGETANSIQPPESRCSSQEHGKMCDEKTCFSCNSVRESEFQIVRGTILIPCRTAMRGSF 798
TPGETA+SIQP S C Q +G +CDE+TCFSCNS++E+ QIVRGTILIPCRTAMRGSF
Sbjct: 1235 TPGETADSIQPSVSTCIFQANGMLCDEETCFSCNSIKETRSQIVRGTILIPCRTAMRGSF 1294
Query: 799 PLNGTYFQVNEVFADHDSSLKPINVPREWLWNLPRRTVYFGTSIPSIFKGLTTEGIQHCF 858
PLNGTYFQVNEVFADH SSL PINVPRE +W LPRRTVYFGTS+P+IFKGL+TE IQ CF
Sbjct: 1295 PLNGTYFQVNEVFADHASSLNPINVPRELIWELPRRTVYFGTSVPTIFKGLSTEKIQACF 1354
Query: 859 WRGYVCVRGFDQKSRAPRPLMARLHFPASKL 889
W+GYVCVRGFD+K+R P+PL+ARLHFPASKL
Sbjct: 1355 WKGYVCVRGFDRKTRGPKPLIARLHFPASKL 1385
Score = 357 (130.7 bits), Expect = 3.4e-178, Sum P(3) = 3.4e-178
Identities = 107/308 (34%), Positives = 157/308 (50%)
Query: 198 HMSSDE--NSKDEHSQFQTLESNTQRVKVKDIDDPKVLSRVSSIPPSSFHPCLTQDLSVE 255
++ S+E +S +H+ NTQ + KD SR SS S H + D + +
Sbjct: 649 YLDSEETMSSPPDHNHSSVTLKNTQPDEEKDYVPSNETSRSSSEIAISAHESV--DKTTD 706
Query: 256 VESYEMRREETRSSGISDVTD-KIALMPEFASQTTDATKLIVAGPEAPRHGNKQSRNSMQ 314
+ Y + + SS D TD K ++ F S+ + T +AP+ N+ +
Sbjct: 707 SKEY-VDSDRKGSSVEVDKTDEKCRVLNLFPSEDSALTCQHSMVSDAPQ-------NTER 758
Query: 315 ANKNSIAQHESELFGDSRFAMEPPAHAQKNDLNL--PKISSGSIDA-IESHNALYNRENT 371
A +S E E + S + D N P +S G + I+ ++ +E T
Sbjct: 759 AGSSSEIDLEGE-YRTSFMKLLQGVQVSLEDSNQVSPNMSPGDCSSEIKGFQSM--KEPT 815
Query: 372 QLKSSV-SDQNKYDHSFSKELNGIDDATSKSKSTRVSKEKQNDFDWDSLRRQVEANGGKK 430
KSSV S + ++ T K K +V KE++ FDWD LRR+ +A G +
Sbjct: 816 --KSSVDSSEPGCCSQQDGDVLSCQKPTLKEKGKKVLKEEKKAFDWDCLRREAQARAGIR 873
Query: 431 ERPEHTKDSLDWEAVRCADVNKIANTIKERGMNNMLAGRIKDFLNRLVRDHGSVDLEWLR 490
E+ T D++DW+A+R ADV ++A TIK RGMN+ LA RI+ FL+RLV DHGS+DLEWLR
Sbjct: 874 EKTRSTMDTVDWKAIRAADVKEVAETIKSRGMNHKLAERIQGFLDRLVNDHGSIDLEWLR 933
Query: 491 DVPPDKAK 498
DVPPDKAK
Sbjct: 934 DVPPDKAK 941
Score = 54 (24.1 bits), Expect = 3.4e-178, Sum P(3) = 3.4e-178
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 20 SSAFMSLAANFPLNSKQKPCHGEEITSVIEEPAEYVLDPEDTIEWKEKMSHQPV 73
SSAFMSLA+ FP+ +S+ Y LD E+T+ +H V
Sbjct: 615 SSAFMSLASQFPVPFVPSSNFDAGTSSMPSIQITY-LDSEETMSSPPDHNHSSV 667
Score = 38 (18.4 bits), Expect = 1.9e-140, Sum P(2) = 1.9e-140
Identities = 10/55 (18%), Positives = 26/55 (47%)
Query: 380 QNKYDHSFSKELNGIDDATSKSKSTRVSKEKQNDFDWDSLRRQVEANGGKKERPE 434
+ K + S ++ ++ + + STR + + D+++ + + NG +E E
Sbjct: 161 RKKVEVSKDQDATPVESSAAVETSTRPKRLCRRVLDFEAENGENQTNGDIREAGE 215
>TAIR|locus:2184432 [details] [associations]
symbol:DME "DEMETER" species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=IMP] [GO:0019104 "DNA
N-glycosylase activity" evidence=ISS;IDA] [GO:0043078 "polar
nucleus" evidence=IDA] [GO:0006349 "regulation of gene expression
by genetic imprinting" evidence=IMP] [GO:0003906 "DNA-(apurinic or
apyrimidinic site) lyase activity" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA;IDA] InterPro:IPR003265
InterPro:IPR003651 InterPro:IPR011257 Pfam:PF00730 PROSITE:PS00764
SMART:SM00525 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
GO:GO:0046872 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0006351
GO:GO:0051539 GO:GO:0009793 GO:GO:0043078 GO:GO:0006306
GO:GO:0004519 GO:GO:0003906 GO:GO:0006349 EMBL:AF521596
EMBL:DQ335243 EMBL:AL162875 EMBL:AK117994 EMBL:BT005357
IPI:IPI00516439 IPI:IPI00534354 IPI:IPI00760328 PIR:T48452
PIR:T48453 PIR:T48454 RefSeq:NP_001078527.1 RefSeq:NP_196076.2
UniGene:At.33104 ProteinModelPortal:Q8LK56 SMR:Q8LK56 STRING:Q8LK56
PaxDb:Q8LK56 PRIDE:Q8LK56 EnsemblPlants:AT5G04560.2 GeneID:830335
KEGG:ath:AT5G04560 TAIR:At5g04560 eggNOG:COG0177
HOGENOM:HOG000112227 InParanoid:Q8LK56 OMA:CTEITES PhylomeDB:Q8LK56
ProtClustDB:CLSN2690787 Genevestigator:Q8LK56 GO:GO:0019104
Uniprot:Q8LK56
Length = 1987
Score = 1424 (506.3 bits), Expect = 1.6e-156, Sum P(3) = 1.6e-156
Identities = 283/482 (58%), Positives = 346/482 (71%)
Query: 417 DSLRRQVEANGG------KKERPEHTKDSLDWEAVRCADVNKIANTIKERGMNNMLAGRI 470
D L R V+ +GG ++ P+ KD L ++R + + ++ ++N LA +
Sbjct: 1506 DFLERIVKDHGGIDLEWLRESPPDKAKDYL--LSIRGLGLKSV-ECVRLLTLHN-LAFPV 1561
Query: 471 KDFLNRLVRDHGSVDLEWLRD-VPPDKAK-YPVLESIQKYLWPRLCKLDQRTLYELHYQM 528
+ R+ G V L+ L + + + YPVLESIQK+LWPRLCKLDQRTLYELHYQ+
Sbjct: 1562 DTNVGRIAVRMGWVPLQPLPESLQLHLLELYPVLESIQKFLWPRLCKLDQRTLYELHYQL 1621
Query: 529 ITFGKVFCTKSKPNCNACPMRGECRHXXXXXXXXRLALPGPEEKAIVSANENRTNTQNPA 588
ITFGKVFCTKS+PNCNACPMRGECRH RLALP PEE+++ SA P
Sbjct: 1622 ITFGKVFCTKSRPNCNACPMRGECRHFASAYASARLALPAPEERSLTSATIPVPPESYPP 1681
Query: 589 MMINQLPLPLTHATDLPVGKLEIAVNNCXXXXXXXXXXXXXRVQVSENDIEDTFC-EDPE 647
+ I + LPL L G NC +++E+DIED + EDP+
Sbjct: 1682 VAIPMIELPLPLEKSLASGAPSNR-ENCEPIIEEPASPGQECTEITESDIEDAYYNEDPD 1740
Query: 648 EIPTIKLNMKEFTQTLQNYMQENLELQEGDMSKALVALTAGAASIPAPKLKNVSRLRTEH 707
EIPTIKLN+++F TL+ +M+ N+ELQEGDMSKALVAL SIP PKLKN+SRLRTEH
Sbjct: 1741 EIPTIKLNIEQFGMTLREHMERNMELQEGDMSKALVALHPTTTSIPTPKLKNISRLRTEH 1800
Query: 708 QVYELPDSHPLLRGMEKREPDDPGRYLLAIWTPGETANSIQPPESRCSSQEHGKMCDEKT 767
QVYELPDSH LL GM+KREPDDP YLLAIWTPGETANS QPPE +C + GKMC ++T
Sbjct: 1801 QVYELPDSHRLLDGMDKREPDDPSPYLLAIWTPGETANSAQPPEQKCGGKASGKMCFDET 1860
Query: 768 CFSCNSVRESEFQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLKPINVPREW 827
C CNS+RE+ Q VRGT+LIPCRTAMRGSFPLNGTYFQVNE+FADH+SSLKPI+VPR+W
Sbjct: 1861 CSECNSLREANSQTVRGTLLIPCRTAMRGSFPLNGTYFQVNELFADHESSLKPIDVPRDW 1920
Query: 828 LWNLPRRTVYFGTSIPSIFKGLTTEGIQHCFWRGYVCVRGFDQKSRAPRPLMARLHFPAS 887
+W+LPRRTVYFGTS+ SIF+GL+TE IQ CFW+G+VCVRGF+QK+RAPRPLMARLHFPAS
Sbjct: 1921 IWDLPRRTVYFGTSVTSIFRGLSTEQIQFCFWKGFVCVRGFEQKTRAPRPLMARLHFPAS 1980
Query: 888 KL 889
KL
Sbjct: 1981 KL 1982
Score = 313 (115.2 bits), Expect = 7.2e-27, Sum P(2) = 7.2e-27
Identities = 77/201 (38%), Positives = 114/201 (56%)
Query: 304 HGNKQSRNSM-QANKNSIAQHES-ELFGDSRFAMEPPAHAQKN--DLNLPKISSGS--ID 357
H + N + NK S Q +L S + + ++N D LP+ + +D
Sbjct: 1339 HQDDTQHNQQDEMNKASHLQKTFLDLLNSSEECLTRQSSTKQNITDGCLPRDRTAEDVVD 1398
Query: 358 AIESHNALYNRENTQLKSSVSDQNKYDHSFSKELNGIDDATSKSKSTRVSKEKQNDFDWD 417
+ ++++L N + SS +Q ++ KE N + K T +K WD
Sbjct: 1399 PLSNNSSLQNIL-VESNSSNKEQTAVEY---KETNAT--ILREMKGTLADGKKPTS-QWD 1451
Query: 418 SLRRQVEANGGKKERPEHTKDSLDWEAVRCADVNKIANTIKERGMNNMLAGRIKDFLNRL 477
SLR+ VE N G++ER ++ DS+D+EA+R A +++I+ IKERGMNNMLA RIKDFL R+
Sbjct: 1452 SLRKDVEGNEGRQERNKNNMDSIDYEAIRRASISEISEAIKERGMNNMLAVRIKDFLERI 1511
Query: 478 VRDHGSVDLEWLRDVPPDKAK 498
V+DHG +DLEWLR+ PPDKAK
Sbjct: 1512 VKDHGGIDLEWLRESPPDKAK 1532
Score = 85 (35.0 bits), Expect = 1.6e-156, Sum P(3) = 1.6e-156
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 20 SSAFMSLAANFPLNSKQKPCHGEEITSVI-EEPAEYVLDPEDTIEWKEKMSH 70
SSAFMSLAA FP + SV+ E+P +L+ + W+EK+ H
Sbjct: 1043 SSAFMSLAARFPPKLSSSREDERNVRSVVVEDPEGCILNLNEIPSWQEKVQH 1094
Score = 60 (26.2 bits), Expect = 1.6e-156, Sum P(3) = 1.6e-156
Identities = 45/234 (19%), Positives = 95/234 (40%)
Query: 240 PPSSFHPCLTQDLSV-EVESYEMRREETRSS--GISDVTDKIAL--MPEFASQTTDATKL 294
P SS+ C T+ V ++E + M+ E S IS D++ +P + +
Sbjct: 1251 PSSSYEQCATRQPHVLDIEDFGMQGEGLGYSWMSISPRVDRVKNKNVPRRFFRQGGSVPR 1310
Query: 295 IVAGPEAPRHGNKQSRNSMQANKNSIAQHESELFGDSRFAMEPPAHAQKNDLNLPKISSG 354
G P ++ + + +++ +H+ + + + M +H QK L+L ++S
Sbjct: 1311 EFTGQIIPSTPHELPGMGLSGSSSAVQEHQDDTQHNQQDEMNKASHLQKTFLDL--LNSS 1368
Query: 355 SIDAIESHNALYNRENTQLKSSVSDQNKYDH-SFSKELNGI--DDATSKSKSTRVSKEKQ 411
+ N + L + ++ D S + L I + +S + T V ++
Sbjct: 1369 EECLTRQSSTKQNITDGCLPRDRTAEDVVDPLSNNSSLQNILVESNSSNKEQTAVEYKET 1428
Query: 412 NDFDWDSLRRQVEANGGKKERPEHTKDSLDWEAVRCADVNKIANTIKERGMNNM 465
N ++ R+++ ++P + W+++R DV +ER NNM
Sbjct: 1429 NA----TILREMKGTLADGKKP-----TSQWDSLR-KDVEGNEGR-QERNKNNM 1471
Score = 46 (21.3 bits), Expect = 2.6e-155, Sum P(4) = 2.6e-155
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 27 AANFPLNSKQKPCHGEEITSVIEEPAEYV 55
A N PL + P E + SV E +YV
Sbjct: 195 ACNKPLYNLNSPIRREAVGSVCESSFQYV 223
Score = 41 (19.5 bits), Expect = 2.6e-155, Sum P(4) = 2.6e-155
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 168 NSFNGSNSFVELLQMVGST 186
NS +G+NSF E+ +G T
Sbjct: 411 NS-SGANSFSEIRDAIGGT 428
Score = 40 (19.1 bits), Expect = 3.3e-153, Sum P(4) = 3.3e-153
Identities = 22/96 (22%), Positives = 37/96 (38%)
Query: 349 PKISSGSIDAIESHNALYNREN---TQLKSSVSDQNKYDHSFSKELNGIDDATSKSKSTR 405
PK+SS D + + L S Q K H E++G+D SK +
Sbjct: 1055 PKLSSSREDERNVRSVVVEDPEGCILNLNEIPSWQEKVQHPSDMEVSGVDSG-SKEQLRD 1113
Query: 406 VSKEKQNDFDWDSLRRQVEANGGKKERPEHTKDSLD 441
S F++ L + ++ +E ++DS D
Sbjct: 1114 CSNSGIERFNF--LEKSIQ---NLEEEVLSSQDSFD 1144
>TAIR|locus:2100138 [details] [associations]
symbol:DML2 "demeter-like 2" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA;ISS] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0006306 "DNA
methylation" evidence=RCA] InterPro:IPR003265 InterPro:IPR003651
InterPro:IPR011257 Pfam:PF00730 PROSITE:PS00764 SMART:SM00525
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
GO:GO:0046872 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0006351
GO:GO:0051539 GO:GO:0004519 eggNOG:COG0177 EMBL:AC010927
IPI:IPI00533587 RefSeq:NP_187612.5 UniGene:At.40005
ProteinModelPortal:Q9SR66 STRING:Q9SR66 PaxDb:Q9SR66 PRIDE:Q9SR66
GeneID:820162 KEGG:ath:AT3G10010 TAIR:At3g10010 InParanoid:Q9SR66
OMA:STHCELN Genevestigator:Q9SR66 GermOnline:AT3G10010
Uniprot:Q9SR66
Length = 1332
Score = 994 (355.0 bits), Expect = 1.9e-140, Sum P(3) = 1.9e-140
Identities = 215/422 (50%), Positives = 263/422 (62%)
Query: 483 SVDLEWLRDVP-PDKAK------YPVLESIQKYLWPRLCKLDQRTLYELHYQMITFGKVF 535
+V L W+ P PD+ + YPVLES+QKYLWPRLCKLDQ+TLYELHY MITFGKVF
Sbjct: 910 AVRLGWVPLQPLPDELQMHLLELYPVLESVQKYLWPRLCKLDQKTLYELHYHMITFGKVF 969
Query: 536 CTKSKPNCNACPMRGECRHXXXXXXXXRLALPGPEEKAIVSANENRTNTQNPAMMINQLP 595
CTK KPNCNACPM+ ECRH RLALP PEE S + ++ +++N P
Sbjct: 970 CTKVKPNCNACPMKAECRHYSSARASARLALPEPEESDRTSVMIHERRSKRKPVVVNFRP 1029
Query: 596 -LPLTHATDLPVGKLEIAVNNCXXXXXXXXXXXXXRVQVSENDIEDT--------FCEDP 646
L L + + + NC + E+DIED EDP
Sbjct: 1030 SLFLYQEKEQEAQRSQ----NCEPIIEEPASPEPEYI---EHDIEDYPRDKNNVGTSEDP 1082
Query: 647 EE----IPTIKLNMKEFTQTLQNYMQENLELQEGDMSKALVALTAGAASIPAPKLKNVSR 702
E IPTI LN + T + + +E S LV L+ AA+IP KLK +
Sbjct: 1083 WENKDVIPTIILNKEAGTS------HDLVVNKEAGTSHDLVVLSTYAAAIPRRKLKIKEK 1136
Query: 703 LRTEHQVYELPDSHPLLRGMEKREPDDPGRYLLAIWTPGETANSIQPPESRCSSQE-HGK 761
LRTEH V+ELPD H +L G E+RE +D YLLAIWTPGET NSIQPP+ RC+ E +
Sbjct: 1137 LRTEHHVFELPDHHSILEGFERREAEDIVPYLLAIWTPGETVNSIQPPKQRCALFESNNT 1196
Query: 762 MCDEKTCFSCNSVRESEFQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLKPI 821
+C+E CF CN RE E Q VRGTILIPCRTAMRG FPLNGTYFQ NEVFADHDSS+ PI
Sbjct: 1197 LCNENKCFQCNKTREEESQTVRGTILIPCRTAMRGGFPLNGTYFQTNEVFADHDSSINPI 1256
Query: 822 NVPREWLWNLPRRTVYFGTSIPSIFKGLTTEGIQHCFWRGYVCVRGFDQKSRAPRPLMAR 881
+VP E +W+L RR Y G+S+ SI KGL+ E I++ F GYVCVRGFD+++R P+ L+ R
Sbjct: 1257 DVPTELIWDLKRRVAYLGSSVSSICKGLSVEAIKYNFQEGYVCVRGFDRENRKPKSLVKR 1316
Query: 882 LH 883
LH
Sbjct: 1317 LH 1318
Score = 348 (127.6 bits), Expect = 1.9e-140, Sum P(3) = 1.9e-140
Identities = 70/130 (53%), Positives = 94/130 (72%)
Query: 374 KSSVSDQNKYDHSFSKEL--NGIDDATSK--SKSTRVSKEKQN-DFDWDSLRRQVEANGG 428
+S++ Q++ + + ++++ N TSK KS +K Q DWDSLR++ E+ G
Sbjct: 744 ESTIQTQDQQESTRTEDVKKNRKKPTTSKPKKKSKESAKSTQKKSVDWDSLRKEAESGGR 803
Query: 429 KKERPEHTKDSLDWEAVRCADVNKIANTIKERGMNNMLAGRIKDFLNRLVRDHGSVDLEW 488
K+ER E T D++DW+A+RC DV+KIAN I +RGMNNMLA RIK FLNRLV+ HGS+DLEW
Sbjct: 804 KRERTERTMDTVDWDALRCTDVHKIANIIIKRGMNNMLAERIKAFLNRLVKKHGSIDLEW 863
Query: 489 LRDVPPDKAK 498
LRDVPPDKAK
Sbjct: 864 LRDVPPDKAK 873
Score = 68 (29.0 bits), Expect = 1.9e-140, Sum P(3) = 1.9e-140
Identities = 22/52 (42%), Positives = 29/52 (55%)
Query: 9 ENLLLHSFDCFSSAFMSLAANFPL--NSKQKPCHGEEITSVIEEPAEYVLDP 58
+N+ HS SSA+M LAA FP+ N + CH E +SV +E LDP
Sbjct: 576 QNVADHSS---SSAYMDLAAEFPVEWNFNKGSCHEEWGSSVTQETI-LNLDP 623
Score = 40 (19.1 bits), Expect = 1.7e-137, Sum P(3) = 1.7e-137
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 44 ITSVIEEPAEYVLDPEDTIEWKEKMSHQPVCDQG 77
ITS ++ +LDP +T+ E++ Q V +G
Sbjct: 666 ITSA-DQSKTMLLDPFNTVLMNEQVDSQMVKGKG 698
Score = 40 (19.1 bits), Expect = 1.7e-137, Sum P(3) = 1.7e-137
Identities = 17/65 (26%), Positives = 29/65 (44%)
Query: 207 DEHSQFQTLESNTQRVKVKDIDDPKV--LSRVSSIPPSSFHPCLTQDLSVEVESYEMRRE 264
DE SQ +T ++++ K + + K S + I SS T+ + E +Y +
Sbjct: 193 DEKSQLETPTLKRKKIRPKVVREGKTKKASSKAGIKKSSIAATATK--TSEESNYVRPKR 250
Query: 265 ETRSS 269
TR S
Sbjct: 251 LTRRS 255
Score = 38 (18.4 bits), Expect = 2.7e-137, Sum P(3) = 2.7e-137
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 56 LDPEDTIEWKEKMSHQPVCD 75
LDPE + WK MS CD
Sbjct: 500 LDPETSRVWKLLMSSID-CD 518
>TAIR|locus:2124301 [details] [associations]
symbol:DML3 "demeter-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0010216 "maintenance of DNA methylation" evidence=IMP]
[GO:0019104 "DNA N-glycosylase activity" evidence=IDA]
InterPro:IPR003265 InterPro:IPR003651 InterPro:IPR011257
PROSITE:PS00764 SMART:SM00478 SMART:SM00525 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0046872
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
Gene3D:1.10.1670.10 InterPro:IPR023170 GO:GO:0003677 GO:GO:0006351
GO:GO:0051539 GO:GO:0004519 EMBL:AL021961 EMBL:AL161584
GO:GO:0010216 eggNOG:COG0177 GO:GO:0019104 EMBL:AY735663
IPI:IPI00525973 PIR:T05430 RefSeq:NP_195132.3 UniGene:At.51042
ProteinModelPortal:O49498 SMR:O49498 STRING:O49498 PRIDE:O49498
EnsemblPlants:AT4G34060.1 GeneID:829552 KEGG:ath:AT4G34060
TAIR:At4g34060 HOGENOM:HOG000064650 OMA:WARIASS PhylomeDB:O49498
ProtClustDB:CLSN2681626 Genevestigator:O49498 Uniprot:O49498
Length = 1044
Score = 867 (310.3 bits), Expect = 1.0e-90, Sum P(2) = 1.0e-90
Identities = 214/541 (39%), Positives = 301/541 (55%)
Query: 365 LYNRENTQLKSSVSDQNKYDHSFSKELNGIDDATSKSKSTRVSKEKQNDFDWDSLRRQVE 424
+Y +E ++ + + N D S + N ++ K R+ E+ F L +V
Sbjct: 508 MYTKEGSRPEMHMDSVNWSDVRLSGQ-NVLETTIKKRGQFRILSERILKF----LNDEVN 562
Query: 425 ANGG-----KKERPEHT--KDSLDWEAVRCADVNKIANTIKERGMNNMLAGRIKDFLNRL 477
NG + P H + L+ E + K A ++ G+ + A + + R+
Sbjct: 563 QNGNIDLEWLRNAPSHLVKRYLLEIEGIGL----KSAECVRLLGLKHH-AFPVDTNVGRI 617
Query: 478 VRDHGSVDLEWLRD-VPPDKA-KYPVLESIQKYLWPRLCKLDQRTLYELHYQMITFGKVF 535
G V LE L + V + +YP ++SIQKYLWPRLCKL Q TLYELHYQMITFGKVF
Sbjct: 618 AVRLGLVPLEPLPNGVQMHQLFEYPSMDSIQKYLWPRLCKLPQETLYELHYQMITFGKVF 677
Query: 536 CTKSKPNCNACPMRGECRHXXXXXXXXRLALPGPEEKAIVSANENRTNTQNPAM-MINQL 594
CTK+ PNCNACPM+ EC++ ++ L PEEK ++Q+ A+ M + +
Sbjct: 678 CTKTIPNCNACPMKSECKYFASAYVSSKVLLESPEEKMHEPNTFMNAHSQDVAVDMTSNI 737
Query: 595 PLPLTHATDLPVGKLEIAVNNCXXXXXXXXXXXXXRVQVSEN-DIEDT-FC---EDPEEI 649
L + G + A+ C R ++ E+ DIED F + +
Sbjct: 738 NLVEECVSS---GCSDQAI--CYKPLVEFPSSP--RAEIPESTDIEDVPFMNLYQSYASV 790
Query: 650 PTIKLNMKEFTQTLQNYMQENLELQEGD--MSKALVALTAGAASIPA-P--KLKNVSRLR 704
P I ++ +++++ + + + D +SKALV T A IP P K+K +RLR
Sbjct: 791 PKIDFDLDALKKSVEDALVISGRMSSSDEEISKALVIPTPENACIPIKPPRKMKYYNRLR 850
Query: 705 TEHQVYELPDSHPLLRGMEKREPDDPGRYLLAIWTPGETANSIQPPESRCSSQEHGKMCD 764
TEH VY LPD+H LL E+R+ DDP YLLAIW PGET++S PP+ +CSS + K+C
Sbjct: 851 TEHVVYVLPDNHELLHDFERRKLDDPSPYLLAIWQPGETSSSFVPPKKKCSS-DGSKLCK 909
Query: 765 EKTCFSCNSVRESEFQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADHDSSLKPINVP 824
K C C ++RE I RGTILIPCRTAMRG+FPLNGTYFQ NEVFADH++SL PI
Sbjct: 910 IKNCSYCWTIREQNSNIFRGTILIPCRTAMRGAFPLNGTYFQTNEVFADHETSLNPIVFR 969
Query: 825 REWLWNLPRRTVYFGTSIPSIFKGLTTEGIQHCFWRGYVCVRGFDQKSRAPRPLMARLHF 884
RE L +R +Y G+++ SIFK L T I+ CFW G++C+R FD+K R P+ L+ RLH
Sbjct: 970 RELCKGLEKRALYCGSTVTSIFKLLDTRRIELCFWTGFLCLRAFDRKQRDPKELVRRLHT 1029
Query: 885 P 885
P
Sbjct: 1030 P 1030
Score = 187 (70.9 bits), Expect = 4.0e-11, Sum P(2) = 4.0e-11
Identities = 45/120 (37%), Positives = 67/120 (55%)
Query: 384 DHSFSKELNGIDDATSKSKSTRVSKEKQNDFDWDSLRRQVEANGGKKERPEHTKDSLDWE 443
D S SK + + A K++ T + +++ DW++LRR G RPE DS++W
Sbjct: 472 DESISKVEDHENTAKRKNEKTGIIEDEI--VDWNNLRRMYTKEGS---RPEMHMDSVNWS 526
Query: 444 AVRCADVNKIANTIKERGMNNMLAGRIKDFLNRLVRDHGSVDLEWLRDVPPDKAKYPVLE 503
VR + N + TIK+RG +L+ RI FLN V +G++DLEWLR+ P K +LE
Sbjct: 527 DVRLSGQNVLETTIKKRGQFRILSERILKFLNDEVNQNGNIDLEWLRNAPSHLVKRYLLE 586
Score = 57 (25.1 bits), Expect = 1.0e-90, Sum P(2) = 1.0e-90
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 20 SSAFMSLAANFPLNSKQKPCHGEEITSVIEEPAE 53
S+AFMS+AA FP++++ E ++ IEEP +
Sbjct: 434 SNAFMSVAAKFPVDAR------EGLSYYIEEPQD 461
Score = 51 (23.0 bits), Expect = 4.4e-90, Sum P(2) = 4.4e-90
Identities = 14/61 (22%), Positives = 29/61 (47%)
Query: 333 FAMEPPAHAQKNDLNLPKISSGSIDAIESHNALYNRENTQ---LKSSVSDQNKYDHSFSK 389
+ +E P A+ ++ + +S SI +E H R+N + ++ + D N ++K
Sbjct: 454 YYIEEPQDAKSSECII--LSDESISKVEDHENTAKRKNEKTGIIEDEIVDWNNLRRMYTK 511
Query: 390 E 390
E
Sbjct: 512 E 512
>TAIR|locus:4515103342 [details] [associations]
symbol:AT4G04957 "AT4G04957" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161502
IPI:IPI00891322 RefSeq:NP_001118934.1 UniGene:At.69420
EnsemblPlants:AT4G04957.1 GeneID:6240683 KEGG:ath:AT4G04957
TAIR:At4g04957 eggNOG:euNOG04714 PhylomeDB:B3H5Q5
ProtClustDB:CLSN2925558 Genevestigator:B3H5Q5 InterPro:IPR015410
Pfam:PF09331 Uniprot:B3H5Q5
Length = 78
Score = 170 (64.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 32/46 (69%), Positives = 38/46 (82%)
Query: 810 VFADHDSSLKPINVPREWLWNLPRRTVYFGTSIPSIFKGLTTEGIQ 855
+FADH SSL PI+VPRE +W+LPRRTV+FGTSIP+IFK GIQ
Sbjct: 30 MFADHASSLNPIDVPRELIWDLPRRTVFFGTSIPTIFKDSKEAGIQ 75
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 901 837 0.00080 122 3 11 23 0.44 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 5
No. of states in DFA: 623 (66 KB)
Total size of DFA: 441 KB (2210 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 85.32u 0.12s 85.44t Elapsed: 00:00:06
Total cpu time: 85.33u 0.12s 85.45t Elapsed: 00:00:06
Start: Tue May 21 19:51:56 2013 End: Tue May 21 19:52:02 2013