Query 002609
Match_columns 900
No_of_seqs 422 out of 3456
Neff 6.5
Searched_HMMs 29240
Date Tue Mar 26 16:08:11 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002609.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1328-1332//hhsearch_pdb/002609hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3aml_A OS06G0726400 protein; s 1.0 1 1 979.0 63.8 666 72-896 7-694 (755)
2 3k1d_A 1,4-alpha-glucan-branch 1.0 1 1 784.6 61.6 669 117-894 18-721 (722)
3 1m7x_A 1,4-alpha-glucan branch 1.0 1 1 770.6 52.6 584 116-896 6-616 (617)
4 3faw_A Reticulocyte binding pr 1.0 1 1 673.1 44.5 610 203-896 73-815 (877)
5 2wan_A Pullulanase; hydrolase, 1.0 1 1 659.5 49.0 539 279-894 314-921 (921)
6 2ya1_A Putative alkaline amylo 1.0 1 1 654.6 45.6 616 203-896 260-1013(1014)
7 2e8y_A AMYX protein, pullulana 1.0 1 1 638.9 45.2 572 238-897 68-713 (718)
8 2ya0_A Putative alkaline amylo 1.0 1 1 635.0 45.5 569 270-897 1-707 (714)
9 2wsk_A Glycogen debranching en 1.0 1 1 632.1 45.2 539 281-894 10-657 (657)
10 1bf2_A Isoamylase; hydrolase, 1.0 1 1 628.8 52.6 573 281-895 5-750 (750)
No 1
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=1.00 E-value=1 Score=979.00 Aligned_cols=666 Identities=38% Similarity=0.743 Sum_probs=579.9
Q ss_pred CCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEECCCEEEEEEECCCCEEEEEEEE
Q ss_conf 88963102005999753499999999999999999981147988876210012407811690999996688208999800
Q 002609 72 GIDPVGFLNKVGITHKPLAQFLRERHKELKNRKDEIFKRFLNLMEFSTGYEIVGMHRNVEHRVDFMDWAPGARYCALVGD 151 (900)
Q Consensus 72 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~ewap~a~~~~l~gd 151 (900)
.++..+ ++++||||+||+++|+.||+.+++++.+|.+.+++|++|+.+|+.||+|... ++|.|++|||+|++|+|+||
T Consensus 7 ~~~~~~-~~~~~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~f~~~~~~lGa~~~~-~gv~F~vwAP~A~~V~l~gd 84 (755)
T 3aml_A 7 EVDHLP-IYDLDPKLEEFKDHFNYRIKRYLDQKCLIEKHEGGLEEFSKGYLKFGINTVD-GATIYREWAPAAQEAQLIGE 84 (755)
T ss_dssp CCSCCT-HHHHCGGGGGGHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTGGGTSEEEEET-TEEEEEEECTTCSEEEEEEG
T ss_pred CCCCCC-EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEC-CEEEEEEECCCCCEEEEEEE
T ss_conf 666675-3644875142699999999999999999875278688872114308418958-91899998998978999976
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC
Q ss_conf 58998888333248766899750899973622379997500110124324567899974087898730577778886431
Q 002609 152 FNGWSPTENCAREGHLGHDDYGYWFIILEDKLREGEKPDELYFQQYNYVDDYDKGDSGVSIQEIFKRANDEYWEPGEDRF 231 (900)
Q Consensus 152 fn~w~~~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (900)
||+|++..++|+ +++.|+|+++||+.
T Consensus 85 fn~w~~~~~~m~-----~~~~GvW~~~v~~~------------------------------------------------- 110 (755)
T 3aml_A 85 FNNWNGAKHKME-----KDKFGIWSIKISHV------------------------------------------------- 110 (755)
T ss_dssp GGTTCCTTCBCE-----ECTTSEEEEEEECB-------------------------------------------------
T ss_pred CCCCCCCEEECE-----ECCCCEEEEEECCC-------------------------------------------------
T ss_conf 378877436564-----47898899997664-------------------------------------------------
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCEEEEEECC
Q ss_conf 13445555233022029999763000025884100000000123479999999089499639999857799279990228
Q 002609 232 VKNRFELPAKLYEQLFGPNGPQTLQELEEMPDAQTTYKAWKEQHKDDLPSNLPYDVIDNGKDYDVFNVASDPRWQEKFRS 311 (900)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lp~~~~~~g~~f~l~sp~a~~V~l~l~~~ 311 (900)
+|
T Consensus 111 ----------------------------------------------------------~g-------------------- 112 (755)
T 3aml_A 111 ----------------------------------------------------------NG-------------------- 112 (755)
T ss_dssp ----------------------------------------------------------TT--------------------
T ss_pred ----------------------------------------------------------CC--------------------
T ss_conf ----------------------------------------------------------56--------------------
Q ss_pred CCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCC-EEECCCCCCCCCCCCC--CCCCEEEECCCCCCCCCCC
Q ss_conf 999975233101068408999918999997999999889998-0203785421245999--9986267527996332433
Q 002609 312 KEPPIPYWLETRKGRKAWLKKYTPGIPHGSKYRVYFNTPDGP-LERIPAWATYVQPDAD--GKEAFAIHWEPSPEFAYKW 388 (900)
Q Consensus 312 ~~~~~~~~~~m~~~~~vW~~~~~~~~~~g~~Y~~~i~~~~g~-~~~~dpya~~~~~~~~--~~~~~~~~~~p~~~~~~~w 388 (900)
.+++.+|++|+|+|.+++|. ..++||||+++.+++. +..+.+++++|+...+|+|
T Consensus 113 ----------------------~~~i~~g~~Y~y~i~~~~g~~~~~~dpya~~~~~~~~~~~~~~~~~v~d~~~~~~~~w 170 (755)
T 3aml_A 113 ----------------------KPAIPHNSKVKFRFRHGGGAWVDRIPAWIRYATFDASKFGAPYDGVHWDPPACERYVF 170 (755)
T ss_dssp ----------------------BCSSCTTEEEEEEEECTTCCCEEECCTTCSCEEECCSSSSCCEEEEECCCCGGGCCCC
T ss_pred ----------------------CCCCCCCCEEEEEEECCCCCEEECCCCCHHEEEECCCCCCCCCCEEEECCCCCCCCCC
T ss_conf ----------------------5678999889999988998288547965204760565567656649978854566787
Q ss_pred CCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 67899999991599985075689998788453787545588981965389801233279899887547876557999999
Q 002609 389 RNTRPKVPKSLRIYECHVGISGSKPKISSFNEFTEKVLPHVKEAGYNVIQLFGVVEHKDYFTVGYRVTNLYAVSSRYGTP 468 (900)
Q Consensus 389 ~~~~p~~p~~~iIYE~Hvg~~~~~~~~Gtf~g~~ek~L~yLk~LGvnaIqLmPI~e~~~~~~wGY~~~nyfavd~~yGt~ 468 (900)
++++++.+.+++|||+|||+|+.++++|||++++++.|||||+||||+||||||++++.+++|||++++||+|+++|||+
T Consensus 171 ~~~~~~~~~~~~IYE~hv~~~~~~~~~Gt~~~l~~~~L~yLk~LGvt~I~L~Pi~e~~~~~~~GY~~~dy~a~~~~~Gt~ 250 (755)
T 3aml_A 171 KHPRPPKPDAPRIYEAHVGMSGEEPEVSTYREFADNVLPRIRANNYNTVQLMAIMEHSYYASFGYHVTNFFAVSSRSGTP 250 (755)
T ss_dssp CSCCCCCCSSCEEEEEESTTCSSSSSCCCHHHHHHHTHHHHHHTTCCEEEEESCEECSCGGGTTCSCSEEEEECGGGCCH
T ss_pred CCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 77677888787799996002236999899999999998899973988799784102788899997567777638889999
Q ss_pred HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99999999995358479994024566565234454688---999855337988865787773466899999999999999
Q 002609 469 DDFKRLVDEAHGLGLLVFLDIVHSYSAADQMVGLSQFD---GSNDCYFHTGKRGFHKYWGTRMFKYDDLDVLHFLLSNLN 545 (900)
Q Consensus 469 eelK~LVd~aH~~GI~VILDvV~NH~s~~~~~~l~~fd---g~~~~Yf~~~~~g~~~~wg~~~lny~~~eVr~flld~l~ 545 (900)
+|||+||++||++||+||||+|+||++.++.+++..|| +++..||+.+++|++..|++++||+++|+|+++|+++++
T Consensus 251 ~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~g~~~fd~~~~~~~~yf~~~~~g~~~~w~~~~lN~~~p~V~~~l~~~l~ 330 (755)
T 3aml_A 251 EDLKYLVDKAHSLGLRVLMDVVHSHASNNVTDGLNGYDVGQNTHESYFHTGDRGYHKLWDSRLFNYANWEVLRFLLSNLR 330 (755)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCSCBCCCTTTSGGGGCSSCCGGGSSBCCGGGGEETTTTEECBCTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHCCCCCCCCCCCEEECCCCCCCCCCCCCEECCCCHHHHHHHHHHHH
T ss_conf 99999999999779999999853666663000000156678888662404999865778885355699999999999999
Q ss_pred HHHHHCCCCEEEECCCCCCHHCCCCCC-CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
Q ss_conf 999953800888637420000267764-5678735563002651299999999999983099989999127999985455
Q 002609 546 WWVVEYQIDGFQFHSLSSMIYTHNGFA-SLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEP 624 (900)
Q Consensus 546 ~Wi~eygVDGFRfD~v~~m~y~~~g~~-~~~g~~~~~~~~~~d~ea~~~l~~~n~~l~~~~P~~i~IaE~~s~~p~l~~~ 624 (900)
||+++|||||||||++++|++.++|+. .|.+.+.++++...+.+++.||+.+++.+++.+|++++|||.|+++|.++++
T Consensus 331 ~Wl~e~gvDGfR~Dav~~m~~~~~g~~~~f~~~~~~~~~~~~~~~ai~fl~~~~~~v~~~~p~~~lIaE~~~~~p~~~~~ 410 (755)
T 3aml_A 331 YWMDEFMFDGFRFDGVTSMLYHHHGINKGFTGNYKEYFSLDTDVDAIVYMMLANHLMHKLLPEATIVAEDVSGMPVLCRP 410 (755)
T ss_dssp HHHHHHCCCEEEETTHHHHHBTTTTTTCCCCSCGGGTSSTTBCHHHHHHHHHHHHHHHHHCTTCEEEECCSSCCTTTTSC
T ss_pred HHHHHCCCCEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEE
T ss_conf 99998299878743223421025576645566643103665561699999999999998789829999745788352200
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHCCCCCCCC
Q ss_conf 66799875311450257999998704999875277899976218877663475234633565689741345204566789
Q 002609 625 TTQGGLGFDYFLNLSASEMWLSFLENTPDHEWSMSKIVSTLVGNGQYSDKMIMYAENHNQSISGGRSFAEILFGEISEHS 704 (900)
Q Consensus 625 ~~~gg~GFD~~~n~~~~d~~~~~lk~~~~~~~~~~~i~~~l~~n~~~~~~~v~Y~EnHDqa~~g~~tl~~~L~~~~~~~~ 704 (900)
...+|+||||+++|++++.|++++++..+..|++..+...+.. .++++.+++|++|||+++.|++++.+.|.+..++..
T Consensus 411 ~~~gglgFd~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~l~~-~~~~~~~vnf~~nHD~~r~g~~~~~f~l~d~~~~~~ 489 (755)
T 3aml_A 411 VDEGGVGFDFRLAMAIPDRWIDYLKNKEDRKWSMSEIVQTLTN-RRYTEKCIAYAESHDQSIVGDKTIAFLLMDKEMYTG 489 (755)
T ss_dssp GGGTSCCCSEEECTTHHHHHHHHHHHCCGGGCCHHHHHHHHHC-SCTTSCEEECSCCCCTTSCCCBCHHHHHHTTHHHHS
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH-CCCCHHHEEHHHCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 0179740134203452388999974188654679999999972-357055266210378210065310000146444422
Q ss_pred CCCH----HHHHHHHHHHHHHHHHHHHHCCCCEEE-ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCHHH
Q ss_conf 9923----555430399999999999907993064-133124699998789999987656334553100012--573199
Q 002609 705 PDTN----NLLLRGCSLHKMIRLITFTIGGHAYLN-FMGNEFGHPKRVEFPMPSNNFSFSLANRHWDLLANR--LHSNLY 777 (900)
Q Consensus 705 ~~~~----~~i~r~~~l~kl~~ll~l~l~G~~Pli-f~G~EfG~~~~~d~p~~~n~~s~~~~~~~W~l~~~~--~~~~L~ 777 (900)
|+.. ..+.++.+++||+++++++++| +|++ |||+|||++++.++|+.++++++..++++|++.+.+ .++.++
T Consensus 490 ~~~l~~~~~~~~~~~~~~k~a~~~llt~pG-~P~lly~G~E~G~~~~~~~p~~g~~~~~~~~r~~W~~~~~~~~~~~~l~ 568 (755)
T 3aml_A 490 MSDLQPASPTINRGIALQKMIHFITMALGG-DGYLNFMGNEFGHPEWIDFPREGNNWSYDKCRRQWSLVDTDHLRYKYMN 568 (755)
T ss_dssp CBSSSCCCHHHHHHHHHHHHHHHHHHHHHC-SEEEEETTGGGTCCSBCCCCCGGGTTCCTTSSCCHHHHHCTTBSHHHHH
T ss_pred HHHCCCCCHHHHHHHHHHHHHHHHHHHCCC-CEEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 221256651345559999999999997899-7799967342378676667655778885323478000468540069999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCC
Q ss_conf 99999999998473222699427962499829999838599999699999654149720589708999528976447766
Q 002609 778 SFDQELMKLDENAKVLLRGSPSVHHVNDAKMVICYMRGPLVFIFNFHPTDSYEDYSVGVEEAGEYQIILNTDESKFGGQG 857 (900)
Q Consensus 778 ~f~k~Li~LRk~~~aL~~g~~~~~~~~~~~~Viaf~R~~llvV~Nf~~~~s~~~y~i~vp~~G~y~~vl~td~~~~gG~~ 857 (900)
+|+++|++||+++|+|+.|..++...+.++.|++|.|..++||+||++.+++.+|+|++|.+|+|+++++||+..|||.+
T Consensus 569 ~~~r~Li~lRk~~paL~~G~~~~~~~~~~~~vlaf~R~~llVv~N~s~~~~~~~~~i~vp~~g~~~~vlnsd~~~~gG~~ 648 (755)
T 3aml_A 569 AFDQAMNALEEEFSFLSSSKQIVSDMNEKDKVIVFERGDLVFVFNFHPNKTYKGYKVGCDLPGKYRVALDSDALVFGGHG 648 (755)
T ss_dssp HHHHHHHHHHHHHCGGGCCCEEEEEEETTTTEEEEEETTEEEEEECCSSCCEEEEEEEESSCSEEEEEEETTSGGGTSCC
T ss_pred HHHHHHHHHHHHCHHHCCCCEEEEEECCCCCEEEEEECCEEEEEECCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCC
T ss_conf 99999999987596650797799855489958999989999999898987420069777899859999738763328766
Q ss_pred CCCCCCCCEEEE--------ECCCCCCCEEEEEEECCCEEEEEEECC
Q ss_conf 323543100000--------010159650399997672799998713
Q 002609 858 LIKEHQYLQRTI--------SKRVDGLRNCIEVPLPSRTAQVYKLSR 896 (900)
Q Consensus 858 ~~~~~~~~~~~~--------~~~~~~~~~~~~i~LP~~sa~Vl~~~~ 896 (900)
+++.... ..+. ...++++++++.|+|||++++||+..+
T Consensus 649 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~lPp~s~~vl~~~~ 694 (755)
T 3aml_A 649 RVGHDVD-HFTSPEGMPGVPETNFNNRPNSFKVLSPPRTCVAYYRVD 694 (755)
T ss_dssp CSCTTCC-EECEECSCTTCGGGSBTTBSEEEEEEECTTEEEEEEECC
T ss_pred CCCCCCC-EECCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECC
T ss_conf 5677642-001343334456433357787699998898899999867
No 2
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=1.00 E-value=1 Score=784.57 Aligned_cols=669 Identities=23% Similarity=0.367 Sum_probs=509.6
Q ss_pred HHHHCCCCCEEEECCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHH
Q ss_conf 76210012407811690999996688208999800589988883332487668997508999736223799975001101
Q 002609 117 FSTGYEIVGMHRNVEHRVDFMDWAPGARYCALVGDFNGWSPTENCAREGHLGHDDYGYWFIILEDKLREGEKPDELYFQQ 196 (900)
Q Consensus 117 ~~~~~~~~G~~~~~~~~~~~~ewap~a~~~~l~gdfn~w~~~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~~~~~ 196 (900)
.+.-+..+|.|... +++..|.|.|+|++|.|+- +.+..+|+ +.+-|.|+..||.. . -..
T Consensus 18 ~~~p~~~lg~h~~~-~~~~~~~~~p~a~~~~~~~-----~~~~~~~~-----~~~~~~~~~~~~~~----~------~~~ 76 (722)
T 3k1d_A 18 HHNPHGILGAHEYD-DHTVIRAFRPHAVEVVALV-----GKDRFSLQ-----HLDSGLFAVALPFV----D------LID 76 (722)
T ss_dssp CSCHHHHSEEEESS-SSEEEEEECTTCSBCCEEB-----TTBCCCCC-----CCTTSEEECCCSCS----C------CCC
T ss_pred CCCCHHHCCCEECC-CCEEEEEECCCCCEEEEEE-----CCEEEEEE-----ECCCCEEEEECCCC----C------CCC
T ss_conf 68947860824789-9789999778982899996-----99287347-----65798489626877----7------864
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCC
Q ss_conf 24324567899974087898730577778886431134455552330220299997630000258841000000001234
Q 002609 197 YNYVDDYDKGDSGVSIQEIFKRANDEYWEPGEDRFVKNRFELPAKLYEQLFGPNGPQTLQELEEMPDAQTTYKAWKEQHK 276 (900)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (900)
|++.+.+..+. ...++|+..-.. +.++++. ..|++-. -+
T Consensus 77 y~~~~~~~~~~-~~~~~d~y~~~~-----------~~~~~~~------~~~~~g~---------------~~-------- 115 (722)
T 3k1d_A 77 YRLQVTYEGCE-PHTVADAYRFLP-----------TLGEVDL------HLFAEGR---------------HE-------- 115 (722)
T ss_dssp CEEEEBCTTSC-CEEECCGGGSCC-----------SSCHHHH------HHHHTTC---------------CT--------
T ss_pred EEEEEEECCCC-EEEECCCCCCCC-----------CCCHHHH------HHHHCCC---------------CH--------
T ss_conf 48999948984-699637865777-----------7887888------8760886---------------15--------
Q ss_pred CCCCCCCCEEEE--------CCCEEEEEECCCCCCEEEEE-ECCCCCCCCEEEEEEE-C-CCCEEEEEECCCCCCCEEEE
Q ss_conf 799999990894--------99639999857799279990-2289999752331010-6-84089999189999979999
Q 002609 277 DDLPSNLPYDVI--------DNGKDYDVFNVASDPRWQEK-FRSKEPPIPYWLETRK-G-RKAWLKKYTPGIPHGSKYRV 345 (900)
Q Consensus 277 ~~~g~~lp~~~~--------~~g~~f~l~sp~a~~V~l~l-~~~~~~~~~~~~~m~~-~-~~vW~~~~~~~~~~g~~Y~~ 345 (900)
..+..|+|... .+|++|+||||.|++|+|+. |+.-... ..+|++ + .|+| +++++++.+|+.|+|
T Consensus 116 -~~~~~~gah~~~~~~~~~~~~g~~F~vwAP~A~~V~l~gdfn~w~~~---~~~m~~~~~~GvW-~~~i~~~~~g~~Y~y 190 (722)
T 3k1d_A 116 -RLWEVLGAHPRSFTTADGVVSGVSFAVWAPNAKGVSLIGEFNGWNGH---EAPMRVLGPSGVW-ELFWPDFPCDGLYKF 190 (722)
T ss_dssp -TGGGTSEEEEEEEECSSSEEEEEEEEEECTTCSEEEEEEGGGTTCCC---SCBCEECGGGCEE-EEEEETCCTTCEEEE
T ss_pred -HHHHHCCCEEEEECCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCC---CCCCEECCCCCEE-EEEECCCCCCCEEEE
T ss_conf -88986097787636876777639999999999889998654788877---3137786899889-998279899987999
Q ss_pred EEECCCCC-EEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC-----CCC---CCCCCEEEEEECCCCCCCCCCC
Q ss_conf 99889998-02037854212459999986267527996332433678-----999---9999159998507568999878
Q 002609 346 YFNTPDGP-LERIPAWATYVQPDADGKEAFAIHWEPSPEFAYKWRNT-----RPK---VPKSLRIYECHVGISGSKPKIS 416 (900)
Q Consensus 346 ~i~~~~g~-~~~~dpya~~~~~~~~~~~~~~~~~~p~~~~~~~w~~~-----~p~---~p~~~iIYE~Hvg~~~~~~~~G 416 (900)
+|.+++|. ...+||||+++...+.. .++++++ .|.|+++ +++ .+++++|||+|+|+|+.. |
T Consensus 191 ~i~~~~g~~~~~~DPya~~~~~~~~~---~s~v~~~----~~~w~d~~w~~~~~~~~~~~~~~~IYE~h~~s~~~~---G 260 (722)
T 3k1d_A 191 RVHGADGVVTDRADPFAFGTEVPPQT---ASRVTSS----DYTWGDDDWMAGRALRNPVNEAMSTYEVHLGSWRPG---L 260 (722)
T ss_dssp EEECTTSCEEEECCTTCSSBCCTTCC---CEECCCC----CCCCSCHHHHHHHTTCCGGGSCCEEEEECTTTSSTT---C
T ss_pred EEECCCCCEEEEECCCCEEECCCCCC---CEEEECC----CCCCCCHHHHHHCCCCCCCCCCEEEEEEEHHHCCCC---C
T ss_conf 99868995899614231542369986---1288179----888796677652223466789807999863123679---9
Q ss_pred CHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCC
Q ss_conf 84537875455889819653898012332798998875478765579999999999999999535847999402456656
Q 002609 417 SFNEFTEKVLPHVKEAGYNVIQLFGVVEHKDYFTVGYRVTNLYAVSSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSYSAA 496 (900)
Q Consensus 417 tf~g~~ek~L~yLk~LGvnaIqLmPI~e~~~~~~wGY~~~nyfavd~~yGt~eelK~LVd~aH~~GI~VILDvV~NH~s~ 496 (900)
||++++++++||||+||||+||||||++++..++|||++++||+|+++|||++|||+||++||++||+||||+|+||++.
T Consensus 261 ~~~~l~~~l~~yLk~lG~t~I~L~Pi~e~~~~~~wGY~~~~y~a~~~~yGt~~dfk~lV~~~H~~GI~VilD~V~NH~~~ 340 (722)
T 3k1d_A 261 SYRQLARELTDYIVDQGFTHVELLPVAEHPFAGSWGYQVTSYYAPTSRFGTPDDFRALVDALHQAGIGVIVDWVPAHFPK 340 (722)
T ss_dssp CHHHHHHHHHHHHHHHTCSEEEESCCEECSCGGGTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECTTCCCC
T ss_pred CHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCC
T ss_conf 98998989999999849986997986257888998877566757565678999999999999975999999997511577
Q ss_pred CCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCC
Q ss_conf 5234454688999855337-988865787773466899999999999999999953800888637420000267764567
Q 002609 497 DQMVGLSQFDGSNDCYFHT-GKRGFHKYWGTRMFKYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLT 575 (900)
Q Consensus 497 ~~~~~l~~fdg~~~~Yf~~-~~~g~~~~wg~~~lny~~~eVr~flld~l~~Wi~eygVDGFRfD~v~~m~y~~~g~~~~~ 575 (900)
+. +++..|+|++ +|++. ...+.++.||+.+||+++++|+++|+++++||+++|||||||||+|++|+|.|.+- ..
T Consensus 341 ~~-~~~~~fdg~~-~y~~~d~~~~~~~~Wg~~~ln~~~p~Vr~~l~~~~~~Wl~~~gvDGfR~Dav~~mly~d~~r--~~ 416 (722)
T 3k1d_A 341 DA-WALGRFDGTP-LYEHSDPKRGEQLDWGTYVFDFGRPEVRNFLVANALYWLQEFHIDGLRVDAVASMLYLDYSR--PE 416 (722)
T ss_dssp CT-TTTTTTTSSC-CSBCCCCCSSSTTCCCCCCBCTTSHHHHHHHHHHHHHHHHHSCCCEEEECCTHHHHBCCCCC--CS
T ss_pred CC-CHHHCCCCCC-CCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHCCCCC--CC
T ss_conf 65-3010278985-42258865675578887346689999999999999999998397789973534421001344--45
Q ss_pred CCHH-HHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
Q ss_conf 8735-563002651299999999999983099989999127999985455667998753114502579999987049998
Q 002609 576 GDLE-EYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 654 (900)
Q Consensus 576 g~~~-~~~~~~~d~ea~~~l~~~n~~l~~~~P~~i~IaE~~s~~p~l~~~~~~gg~GFD~~~n~~~~d~~~~~lk~~~~~ 654 (900)
|.+. ...+...+.+++.||+.++..+++.+|++++|||.++++|.++++...+|+|||+.|||+++++.+.++...+..
T Consensus 417 g~w~~n~~gg~~n~~~~~fl~~l~~~v~~~~P~~~~iaE~~t~~p~v~~~~~~gGlGfd~~wn~~~~~d~l~y~~~~~~~ 496 (722)
T 3k1d_A 417 GGWTPNVHGGRENLEAVQFLQEMNATAHKVAPGIVTIAEESTPWSGVTRPTNIGGLGFSMKWNMGWMHDTLDYVSRDPVY 496 (722)
T ss_dssp SCCSCCCSSCSBCHHHHHHHHHHHHHHHHHSTTCEEEECCCSSCCCTTSCGGGTCCCCSEEECHHHHHHHHHHHHSCGGG
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHH
T ss_conf 65465667875474889999999999897689969999845788321022005877524612443278899987248066
Q ss_pred -CCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCE
Q ss_conf -7527789997621887766347523463356568974134520456678999235554303999999999999079930
Q 002609 655 -EWSMSKIVSTLVGNGQYSDKMIMYAENHNQSISGGRSFAEILFGEISEHSPDTNNLLLRGCSLHKMIRLITFTIGGHAY 733 (900)
Q Consensus 655 -~~~~~~i~~~l~~n~~~~~~~v~Y~EnHDqa~~g~~tl~~~L~~~~~~~~~~~~~~i~r~~~l~kl~~ll~l~l~G~~P 733 (900)
.+....+...+... . ....++..|||+...|+.++..++.+... ...+..+++.+++++++| +|
T Consensus 497 r~~~~~~lt~~~~ya--~-~e~f~l~~sHD~~~~Gk~~ll~~~~gd~~-----------~~~a~lr~~~a~~lt~PG-~p 561 (722)
T 3k1d_A 497 RSYHHHEMTFSMLYA--F-SENYVLPLSHDEVVHGKGTLWGRMPGNNH-----------VKAAGLRSLLAYQWAHPG-KQ 561 (722)
T ss_dssp GGGGHHHHHGGGGTT--T-SSCEEEEECGGGSSTTSCCHHHHSCSSHH-----------HHHHHHHHHHHHHHHSSS-EE
T ss_pred HHHHHHCCCHHHHHH--C-CCCEECCCCCCHHCCCCCCHHHHCCCCHH-----------HHHHHHHHHHHHHHHCCC-EE
T ss_conf 553310032445654--2-33500466750112476545540799678-----------999999999999985898-54
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHHHHHCCCCCC------CCCEEEEECCC
Q ss_conf 641331246999987899999876563345531000125-73199999999999984732226------99427962499
Q 002609 734 LNFMGNEFGHPKRVEFPMPSNNFSFSLANRHWDLLANRL-HSNLYSFDQELMKLDENAKVLLR------GSPSVHHVNDA 806 (900)
Q Consensus 734 lif~G~EfG~~~~~d~p~~~n~~s~~~~~~~W~l~~~~~-~~~L~~f~k~Li~LRk~~~aL~~------g~~~~~~~~~~ 806 (900)
|||||+|+|+....+ ....++|.+.+.+. ++.+.+++++|++||+++++|+. ++.|+...+.+
T Consensus 562 lif~G~E~G~~~e~~----------~~~~l~W~~~~~~~~~~~l~~~~~~Ln~lR~~~paL~~~d~~~~gf~wi~~~d~~ 631 (722)
T 3k1d_A 562 LLFMGQEFGQRAEWS----------EQRGLDWFQLDENGFSNGIQRLVRDINDIYRCHPALWSLDTTPEGYSWIDANDSA 631 (722)
T ss_dssp EEETTGGGTCCSCCC----------TTTCCCGGGGGSSSSHHHHHHHHHHHHHHHHHCGGGTTTTTSGGGEEEEEEEETT
T ss_pred EEECCCCCCCCCCCC----------CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHCCCCCCCCEEEEECCCCC
T ss_conf 885551005666545----------4444671002574313789999999999997484341266687864899734799
Q ss_pred CEEEEEECC-----CEEEEEECCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEE
Q ss_conf 829999838-----599999699999654149720589708999528976447766323543100000010159650399
Q 002609 807 KMVICYMRG-----PLVFIFNFHPTDSYEDYSVGVEEAGEYQIILNTDESKFGGQGLIKEHQYLQRTISKRVDGLRNCIE 881 (900)
Q Consensus 807 ~~Viaf~R~-----~llvV~Nf~~~~s~~~y~i~vp~~G~y~~vl~td~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~ 881 (900)
+.|++|.|. .++||+||++. .+.+|+|++|.+|.|++++|||+..|||+++.+.+. ..+....++++++++.
T Consensus 632 ~~viaf~R~~~~~~~llvv~N~s~~-~~~~y~igvp~~G~~~eilnsd~~~ygG~~~~~~~~--~~~~~~~~~g~~~s~~ 708 (722)
T 3k1d_A 632 NNVLSFMRYGSDGSVLACVFNFAGA-EHRDYRLGLPRAGRWREVLNTDATIYHGSGIGNLGG--VDATDDPWHGRPASAV 708 (722)
T ss_dssp TTEEEEEEECTTSCEEEEEEECSSS-CEEEEEEEESSCEEEEEEEETTCGGGTSCCCSCTTE--EEEESCCBTTBSEEEE
T ss_pred CCEEEEEEECCCCCEEEEEEECCCC-CCEEEEECCCCCCEEEEEEECCHHHCCCCCCCCCCE--EEEEEECCCCEEEEEE
T ss_conf 9789999985899879999969898-714689646899879998517636439777677872--7986404688014999
Q ss_pred EEECCCEEEEEEE
Q ss_conf 9976727999987
Q 002609 882 VPLPSRTAQVYKL 894 (900)
Q Consensus 882 i~LP~~sa~Vl~~ 894 (900)
|+|||++++||++
T Consensus 709 l~lpp~~~~~~~~ 721 (722)
T 3k1d_A 709 LVLPPTSALWLTP 721 (722)
T ss_dssp EEECTTEEEEEEE
T ss_pred EEECCCEEEEEEE
T ss_conf 9989988999997
No 3
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=1.00 E-value=1 Score=770.61 Aligned_cols=584 Identities=25% Similarity=0.435 Sum_probs=461.4
Q ss_pred HHHHHCCCCCEEEECC---CEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCH
Q ss_conf 8762100124078116---9099999668820899980058998888333248766899750899973622379997500
Q 002609 116 EFSTGYEIVGMHRNVE---HRVDFMDWAPGARYCALVGDFNGWSPTENCAREGHLGHDDYGYWFIILEDKLREGEKPDEL 192 (900)
Q Consensus 116 ~~~~~~~~~G~~~~~~---~~~~~~ewap~a~~~~l~gdfn~w~~~~~~~~~~~~~~~~~g~w~~~~~~~~~~~~~~~~~ 192 (900)
....+|+.||+|.... ++|.|++|||+|++|+|+||||+|+...++|+ .+.+.|+|+++|
T Consensus 6 ~~~~~~~~lGa~~~~~~~~~gv~F~vwAP~A~~V~L~gdfn~~~~~~~~M~----~~~~~GvW~~~v------------- 68 (617)
T 1m7x_A 6 THLRPYETLGAHADTMDGVTGTRFSVWAPNARRVSVVGQFNYWDGRRHPMR----LRKESGIWELFI------------- 68 (617)
T ss_dssp CCSCGGGTSEEEEEESSSCEEEEEEEECSSCSCEEEEEGGGTSCTTTCBCC----CCTTTTEEEEEE-------------
T ss_pred CCCCCHHCCCCEEECCCCCCCEEEEEECCCCCEEEEEEEECCCCCCEEEEE----ECCCCCEEEEEE-------------
T ss_conf 255230127955945688685899999999998799988179888506757----879998999997-------------
Q ss_pred HHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHCCC
Q ss_conf 11012432456789997408789873057777888643113445555233022029999763000025884100000000
Q 002609 193 YFQQYNYVDDYDKGDSGVSIQEIFKRANDEYWEPGEDRFVKNRFELPAKLYEQLFGPNGPQTLQELEEMPDAQTTYKAWK 272 (900)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (900)
T Consensus 69 -------------------------------------------------------------------------------- 68 (617)
T 1m7x_A 69 -------------------------------------------------------------------------------- 68 (617)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCEEEECCCEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEEECCCC
Q ss_conf 12347999999908949963999985779927999022899997523310106840899991899999799999988999
Q 002609 273 EQHKDDLPSNLPYDVIDNGKDYDVFNVASDPRWQEKFRSKEPPIPYWLETRKGRKAWLKKYTPGIPHGSKYRVYFNTPDG 352 (900)
Q Consensus 273 ~~~~~~~g~~lp~~~~~~g~~f~l~sp~a~~V~l~l~~~~~~~~~~~~~m~~~~~vW~~~~~~~~~~g~~Y~~~i~~~~g 352 (900)
+++.+|..|+|+|.+.+|
T Consensus 69 --------------------------------------------------------------~~~~~g~~Y~f~i~~~~g 86 (617)
T 1m7x_A 69 --------------------------------------------------------------PGAHNGQLYKYEMIDANG 86 (617)
T ss_dssp --------------------------------------------------------------ETCCTTCEEEEEEECTTS
T ss_pred --------------------------------------------------------------CCCCCCCEEEEEEECCCC
T ss_conf --------------------------------------------------------------279999899999990799
Q ss_pred C-EEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC-C---CCCCCCEEEEEECCCCCCC---CCCCCHHHHHHH
Q ss_conf 8-020378542124599999862675279963324336789-9---9999915999850756899---987884537875
Q 002609 353 P-LERIPAWATYVQPDADGKEAFAIHWEPSPEFAYKWRNTR-P---KVPKSLRIYECHVGISGSK---PKISSFNEFTEK 424 (900)
Q Consensus 353 ~-~~~~dpya~~~~~~~~~~~~~~~~~~p~~~~~~~w~~~~-p---~~p~~~iIYE~Hvg~~~~~---~~~Gtf~g~~ek 424 (900)
. ...+||||+++..... ..++++++ .+|+|+++. + ...++++|||+|||.|+.. +..|||++++++
T Consensus 87 ~~~~~~DPya~~~~~~~~---~~s~v~~~---~~~~W~~~~~~~~~~~~~~~~iYei~~~~f~~~~~~g~~g~~~~i~~~ 160 (617)
T 1m7x_A 87 NLRLKSDPYAFEAQMRPE---TASLICGL---PEKVVQTEERKKANQFDAPISIYEVHLGSWRRHTDNNFWLSYRELADQ 160 (617)
T ss_dssp CEEEECCTTCSSEECTTT---CEEECCCC---CCCCCCCHHHHHHHSTTSCCEEEEECTTSSCBCTTTCCBCCHHHHHHH
T ss_pred CEEEECCCCCEEECCCCC---CEEEEECC---CCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCHHHHHHH
T ss_conf 589843805234426999---51899379---888988755567886667857999988993478888885599999999
Q ss_pred HHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC
Q ss_conf 45588981965389801233279899887547876557999999999999999953584799940245665652344546
Q 002609 425 VLPHVKEAGYNVIQLFGVVEHKDYFTVGYRVTNLYAVSSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSYSAADQMVGLSQ 504 (900)
Q Consensus 425 ~L~yLk~LGvnaIqLmPI~e~~~~~~wGY~~~nyfavd~~yGt~eelK~LVd~aH~~GI~VILDvV~NH~s~~~~~~l~~ 504 (900)
+|||||+||||+||||||++++..++|||++++||+|+++|||++|||+||++||++||+||||+|+||++.+. .++..
T Consensus 161 ll~yl~~lGv~~i~l~Pi~~~~~~~~~GY~~~~y~~~~~~~Gt~~~~~~lv~~~H~~Gi~VilD~V~NH~~~~~-~~~~~ 239 (617)
T 1m7x_A 161 LVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDD-FALAE 239 (617)
T ss_dssp HHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECGGGSCHHHHHHHHHHHHHTTCEEEEEECTTSCCCST-TSSTT
T ss_pred HHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC-CHHHH
T ss_conf 99999984999899664303777798786655377637567999999999999998899899998057666764-30430
Q ss_pred CCCCCCCCCCCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCCCCH-HHHH
Q ss_conf 889998553379-88865787773466899999999999999999953800888637420000267764567873-5563
Q 002609 505 FDGSNDCYFHTG-KRGFHKYWGTRMFKYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDL-EEYC 582 (900)
Q Consensus 505 fdg~~~~Yf~~~-~~g~~~~wg~~~lny~~~eVr~flld~l~~Wi~eygVDGFRfD~v~~m~y~~~g~~~~~g~~-~~~~ 582 (900)
|++++ +|++.+ ..|.++.|++.+||+++|+|+++|+++++||+++|||||||||++++|++.+.+... |.+ ...+
T Consensus 240 ~d~~~-~y~~~~~~~g~~~~w~~~~ln~~~p~v~~~i~~~~~~W~~~~gvDGfR~D~~~~~~~~d~~~~~--g~~~~~~~ 316 (617)
T 1m7x_A 240 FDGTN-LYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRDYSRKE--GEWIPNEF 316 (617)
T ss_dssp GGGSC-SSBCC-----------CCCBCTTSHHHHHHHHHHHHHHHHHSCCCEEEECCSHHHHCC----------------
T ss_pred CCCCC-CCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHCCCCCCC--CCCCCCCC
T ss_conf 58986-4232686568768999841257999999999999999999849688997162442211466555--66555545
Q ss_pred HCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC-CCCCHHHH
Q ss_conf 00265129999999999998309998999912799998545566799875311450257999998704999-87527789
Q 002609 583 NQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPD-HEWSMSKI 661 (900)
Q Consensus 583 ~~~~d~ea~~~l~~~n~~l~~~~P~~i~IaE~~s~~p~l~~~~~~gg~GFD~~~n~~~~d~~~~~lk~~~~-~~~~~~~i 661 (900)
+...+.+++.||+.+++.+++.+|++++|||.|+.+|.++++...+|.|||+.+|+++++++++++++.+. ..+....+
T Consensus 317 ~~~~~~~~~~fl~~~~~~v~~~~p~~~~iaE~~~~~~~~~~~~~~~g~gfd~~~n~~~~~~~~~~~~~~~~~~~~~~~~l 396 (617)
T 1m7x_A 317 GGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKL 396 (617)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHSSTTCEEEECCSSCCTTTTBCTTTTBSCCSEEECHHHHHHHHHHHHSCGGGGGGCTHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEECCCCCCCCCCEECCCHHHHHHHHHCCCCCCHHHHHCCC
T ss_conf 66578149999999999999778983999957877746120014898766837387537899998634964202220143
Q ss_pred HHHHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
Q ss_conf 99762188776634752346335656897413452045667899923555430399999999999907993064133124
Q 002609 662 VSTLVGNGQYSDKMIMYAENHNQSISGGRSFAEILFGEISEHSPDTNNLLLRGCSLHKMIRLITFTIGGHAYLNFMGNEF 741 (900)
Q Consensus 662 ~~~l~~n~~~~~~~v~Y~EnHDqa~~g~~tl~~~L~~~~~~~~~~~~~~i~r~~~l~kl~~ll~l~l~G~~Plif~G~Ef 741 (900)
...+.. .... ...+++|||+++.|+.++..++.+... ...+..|++.+++|+++| +||||||+|+
T Consensus 397 ~~~~~~--~~~~-~fv~~~nHD~~~~g~~~~~~~~~g~~~-----------~~~~~~r~a~~~~l~~pG-~P~iy~G~E~ 461 (617)
T 1m7x_A 397 TFGILY--NYTE-NFVLPLSHDEVVHGKKSILDRMPGDAW-----------QKFANLRAYYGWMWAFPG-KKLLFMGNEF 461 (617)
T ss_dssp HGGGTT--TTTS-CEEEEECGGGSSTTSCCHHHHSCSSHH-----------HHHHHHHHHHHHHHHSSS-EEEEETTTTT
T ss_pred HHHHHC--CCCC-CEEEEECCCCCCCCCCCHHHHCCCCHH-----------HHHHHHHHHHHHHHHCCC-CCEEECCHHC
T ss_conf 145532--5663-568875788754576466650899689-----------999999999999987799-7399756110
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHCCCCCCCC------CEEEEECCCCEEEEEE
Q ss_conf 69999878999998765633455310001--257319999999999998473222699------4279624998299998
Q 002609 742 GHPKRVEFPMPSNNFSFSLANRHWDLLAN--RLHSNLYSFDQELMKLDENAKVLLRGS------PSVHHVNDAKMVICYM 813 (900)
Q Consensus 742 G~~~~~d~p~~~n~~s~~~~~~~W~l~~~--~~~~~L~~f~k~Li~LRk~~~aL~~g~------~~~~~~~~~~~Viaf~ 813 (900)
|+++..+ ..++++|++.+. +.++.+++|+|+|++||+++++|+.+. .++...+.++.|++|.
T Consensus 462 G~~~~~~----------~~~~~~W~~~~~~~~~~~~l~~~~~~L~~lR~~~~al~~g~~~~~~~~~~~~~~~~~~vlaf~ 531 (617)
T 1m7x_A 462 AQGREWN----------HDASLDWHLLEGGDNWHHGVQRLVRDLNLTYRHHKAMHELDFDPYGFEWLVVDDKERSVLIFV 531 (617)
T ss_dssp TCSSCCC----------TTSCCCGGGGCSSCCHHHHHHHHHHHHHHHHTTCGGGTSCTTSGGGEEEEEEEETTTTEEEEE
T ss_pred CCCCCCC----------CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCEEEEECCCCCCEEEEEE
T ss_conf 7777777----------546558122145552368999999999998764977644777778737986448887199999
Q ss_pred CC-----CEEEEEECCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCE
Q ss_conf 38-----5999996999996541497205897089995289764477663235431000000101596503999976727
Q 002609 814 RG-----PLVFIFNFHPTDSYEDYSVGVEEAGEYQIILNTDESKFGGQGLIKEHQYLQRTISKRVDGLRNCIEVPLPSRT 888 (900)
Q Consensus 814 R~-----~llvV~Nf~~~~s~~~y~i~vp~~G~y~~vl~td~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~i~LP~~s 888 (900)
|. .++||+||++. ...+|++++|.+|+|+++++|+...|||.+..+... ..+....++++++++.|+|||+|
T Consensus 532 R~~~~~~~~lvv~N~s~~-~~~~~~i~~p~~g~~~~~l~sd~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~lpp~s 608 (617)
T 1m7x_A 532 RRDKEGNEIIVASNFTPV-PRHDYRFGINQPGKWREILNTDSMHYHGSNAGNGGT--VHSDEIASHGRQHSLSLTLPPLA 608 (617)
T ss_dssp EECTTCCEEEEEEECSSC-CEEEECCBCSSCSEEEEEEETTSTGGGCCCCSCCSC--EECBSCCBTTBSCBCCEEECTTE
T ss_pred EECCCCCEEEEEECCCCC-CCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCCC--CCCCCCCCCCCCCEEEEEECCCE
T ss_conf 984899979999889998-765648789999728999857631138978678774--00133344787755999988978
Q ss_pred EEEEEECC
Q ss_conf 99998713
Q 002609 889 AQVYKLSR 896 (900)
Q Consensus 889 a~Vl~~~~ 896 (900)
++||+.+.
T Consensus 609 ~~vl~~~~ 616 (617)
T 1m7x_A 609 TIWLVREA 616 (617)
T ss_dssp EEEEEEEC
T ss_pred EEEEEECC
T ss_conf 99999857
No 4
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=1.00 E-value=1 Score=673.10 Aligned_cols=610 Identities=18% Similarity=0.234 Sum_probs=436.4
Q ss_pred CCCCCCCCCHHHHHH-HCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC-CCC
Q ss_conf 678999740878987-305777788864311344555523302202999976300002588410000000012347-999
Q 002609 203 YDKGDSGVSIQEIFK-RANDEYWEPGEDRFVKNRFELPAKLYEQLFGPNGPQTLQELEEMPDAQTTYKAWKEQHKD-DLP 280 (900)
Q Consensus 203 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g 280 (900)
+||+|+.|+|+++.. .. .+.+.++++|++++++|+++|....+.+ ..+|++.|+. ++.
T Consensus 73 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~d~~~~y~ 132 (877)
T 3faw_A 73 TDKNQNAIQISDITLDTS-------KSLLIIKGDFNPKQGHFNISYNGNNVTT-------------RQSWEFKDQLYAYS 132 (877)
T ss_dssp ECTTSCEECEEEEEEETT-------TTEEEEEECCCGGGCSCEEEETTEEEEC-------------EECHHHHHHHHCCC
T ss_pred ECCCCCEEEEEEEEECCC-------CCEEEEECCCCCCCCCEEEEECCEEEEE-------------ECCCEEEHHHCCCC
T ss_conf 816998877677787688-------7579994566614797699988865553-------------10406502222778
Q ss_pred CCCCEEEECCC--EEEEEECCCCCCEEEEEECCCCCCC-CEEEEEEE-CCCCEEEEEEC---C--CCCCCEEEEEEECCC
Q ss_conf 99990894996--3999985779927999022899997-52331010-68408999918---9--999979999998899
Q 002609 281 SNLPYDVIDNG--KDYDVFNVASDPRWQEKFRSKEPPI-PYWLETRK-GRKAWLKKYTP---G--IPHGSKYRVYFNTPD 351 (900)
Q Consensus 281 ~~lp~~~~~~g--~~f~l~sp~a~~V~l~l~~~~~~~~-~~~~~m~~-~~~vW~~~~~~---~--~~~g~~Y~~~i~~~~ 351 (900)
++|+|++.++| ++|+||||+|++|+||||+...... ...++|.+ .+|+| +++++ + ..+|++|+|+|...+
T Consensus 133 g~lGa~~~~~g~~v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~~~gvW-~~~v~~~~G~~~~~g~~Y~yrv~~~~ 211 (877)
T 3faw_A 133 GNLGAVLNQDGSKVEASLWSPSADSVTMIIYDKDNQNRVVATTPLVKNNKGVW-QTILDTKLGIKNYTGYYYLYEIKRGK 211 (877)
T ss_dssp SCCEEEECTTSSCEEEEEECTTCSEEEEEEEETTEEEEEEEEEECEECTTSEE-EEEECGGGTCSCCTTCEEEEEEEETT
T ss_pred CCCCCEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCEEEECCCCCCCCEE-EEEECCCCCCCCCCCEEEEEEEEECC
T ss_conf 99977795899889999999999988999985898766303662556879989-99978778876678808999996689
Q ss_pred CCEEECCCCCCCCCCC-C--C---CCCCEEEECCCCCCCCCCCCCC----CCC--CCCCCEEEEEECCCCCCCC------
Q ss_conf 9802037854212459-9--9---9986267527996332433678----999--9999159998507568999------
Q 002609 352 GPLERIPAWATYVQPD-A--D---GKEAFAIHWEPSPEFAYKWRNT----RPK--VPKSLRIYECHVGISGSKP------ 413 (900)
Q Consensus 352 g~~~~~dpya~~~~~~-~--~---~~~~~~~~~~p~~~~~~~w~~~----~p~--~p~~~iIYE~Hvg~~~~~~------ 413 (900)
.....+||||+++... . . .....++++++ ..+.|.+. .|. .+++++|||+|||.|+.++
T Consensus 212 ~~~~~~DPYA~~~~~~~~~~~~~~~~~~~s~vvd~---~~~~~~~~~~~~~p~~~~~~~~vIYElhvr~ft~~~~~~~~~ 288 (877)
T 3faw_A 212 DKVKILDPYAKSLAEWDSNTVNDDIKTAKAAFVNP---SQLGPQNLSFAKIANFKGRQDAVIYEAHVRDFTSDQSLDGKL 288 (877)
T ss_dssp EEEEECCTTCSCBCCCBGGGCCSSCCSCCEECCCG---GGSSCTTCCCCCCTTCCSGGGCEEEEECTTGGGCCGGGTTTC
T ss_pred CEEEECCCCCEECCCCCCCCCCCCCCCCCEEEECC---CCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHCCCCCCCCCC
T ss_conf 61572385631125568433455445786599643---015877665456777788666589999764754899877545
Q ss_pred --CCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECC-----------------CCCCCCCCCCCCCCCCCCCCC-------
Q ss_conf --878845378754558898196538980123327-----------------989988754787655799999-------
Q 002609 414 --KISSFNEFTEKVLPHVKEAGYNVIQLFGVVEHK-----------------DYFTVGYRVTNLYAVSSRYGT------- 467 (900)
Q Consensus 414 --~~Gtf~g~~ek~L~yLk~LGvnaIqLmPI~e~~-----------------~~~~wGY~~~nyfavd~~yGt------- 467 (900)
+.|||++++++ |||||+||||+||||||++++ ..++|||++.+||+|+++|||
T Consensus 289 ~~~~Gt~~gl~~~-L~yLk~LGvtaV~L~Pi~~~~~~~e~~~~~~~~~~~~~~~ynwGY~~~~~~a~~~~yGt~p~~~~~ 367 (877)
T 3faw_A 289 KNQLGTFAAFSEK-LDYLQKLGVTHIQLLPVLSYFYVNEMDKSRSTAYTSSDNNYNWGYDPQSYFALSGMYSEKPKDPSA 367 (877)
T ss_dssp SSCTTSHHHHGGG-HHHHHHHTCSEEEESCCBCBSSCBTTCCCCCCSCCSSSCSCCCSCSBSCSSSBCSTTCSCTTSTTH
T ss_pred CCCCCCHHHHHHH-HHHHHHCCCCEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 4788799999998-999997499989985510034436222345455567888776576767665646544678777621
Q ss_pred -HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf -99999999999535847999402456656523445468899-985533798886-578777346689999999999999
Q 002609 468 -PDDFKRLVDEAHGLGLLVFLDIVHSYSAADQMVGLSQFDGS-NDCYFHTGKRGF-HKYWGTRMFKYDDLDVLHFLLSNL 544 (900)
Q Consensus 468 -~eelK~LVd~aH~~GI~VILDvV~NH~s~~~~~~l~~fdg~-~~~Yf~~~~~g~-~~~wg~~~lny~~~eVr~flld~l 544 (900)
++|||+||++||++||+||||||+||++.++ .|.+. +.+|++.+..|. ...|+++++|+.+++|+++|++++
T Consensus 368 ~~~efk~lV~~~H~~GI~VILDvV~NH~a~~~-----~~~~~~p~yy~~~~~dg~~~~~~~g~~ln~~~p~Vr~~i~d~l 442 (877)
T 3faw_A 368 RIAELKQLIHDIHKRGMGVILDVVYNHTAKTY-----LFEDIEPNYYHFMNEDGSPRESFGGGRLGTTHAMSRRVLVDSI 442 (877)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECTTCCSCTH-----HHHTTSTTTSBCBCTTSCBCEETTEECBCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEEECCCCCCC-----CCCCCCCCEEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 78999999999987599899999613545765-----5356787302442799975215777655657989999999999
Q ss_pred HHHHHHCCCCEEEECCCCCCHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
Q ss_conf 99999538008886374200002677645678735563002651299999999999983099989999127999985455
Q 002609 545 NWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEP 624 (900)
Q Consensus 545 ~~Wi~eygVDGFRfD~v~~m~y~~~g~~~~~g~~~~~~~~~~d~ea~~~l~~~n~~l~~~~P~~i~IaE~~s~~p~l~~~ 624 (900)
+||+++|||||||||+++++ ...+|..+...+++.+|++++|||.|+...+...
T Consensus 443 ~~Wv~e~gVDGFRfD~a~~~-------------------------~~~~~~~~~~~~~~~~P~~~ligE~Wd~~~g~~~- 496 (877)
T 3faw_A 443 KYLTSEFKVDGFRFDMMGDH-------------------------DAAAIELAYKEAKAINPNMIMIGEGWRTFQGDQG- 496 (877)
T ss_dssp HHHHHHHCCCEEEETTGGGS-------------------------BHHHHHHHHHHHHHHCTTCEEEECCCSCCCCBTT-
T ss_pred HHHHHHCCCCEEEEECCCCC-------------------------CHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC-
T ss_conf 99999708768999567769-------------------------9899999999888448881899744455666443-
Q ss_pred CCCCCCCCCCC---CC---CHHHHHHHHHHCCCCC----------CCCCHHHHHHHHHCC-----CCCCCCEEECCCCCC
Q ss_conf 66799875311---45---0257999998704999----------875277899976218-----877663475234633
Q 002609 625 TTQGGLGFDYF---LN---LSASEMWLSFLENTPD----------HEWSMSKIVSTLVGN-----GQYSDKMIMYAENHN 683 (900)
Q Consensus 625 ~~~gg~GFD~~---~n---~~~~d~~~~~lk~~~~----------~~~~~~~i~~~l~~n-----~~~~~~~v~Y~EnHD 683 (900)
....+|+.. ++ ..+.+.+++++++... ...++..+...+.+. ...+..+|+|++|||
T Consensus 497 --~~~~~~~~~~~~~~~~i~~f~d~iR~~~rg~~~~~~~~gf~~g~~~~l~~~~~~l~~~~~~~~~~~P~~sVnFV~nHD 574 (877)
T 3faw_A 497 --KPVKPADQDWMKSTDTVGVFSDDIRNSLKSGFPNEGTPAFITGGPQSLQGIFKNIKAQPGNFEADSPGDVVQYIAAHD 574 (877)
T ss_dssp --BCCCBSSGGGGGGCSSEEEECHHHHHHHHCCTTCTTCCCGGGTCCEEHHHHHHHHTTCCSSSCCSSGGGEEECSCCSS
T ss_pred --CCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCC
T ss_conf --212366433442377520456779998716654335302320770789999998644831124578642023421246
Q ss_pred CCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC--------------
Q ss_conf 565689741345204566789992355543039999999999990799306413312469999878--------------
Q 002609 684 QSISGGRSFAEILFGEISEHSPDTNNLLLRGCSLHKMIRLITFTIGGHAYLNFMGNEFGHPKRVEF-------------- 749 (900)
Q Consensus 684 qa~~g~~tl~~~L~~~~~~~~~~~~~~i~r~~~l~kl~~ll~l~l~G~~Plif~G~EfG~~~~~d~-------------- 749 (900)
.. ++.+.+.-... . +..........+.+|+++++|+++| +||+|+|+|||+++.+..
T Consensus 575 ~~-----tl~Dlls~~~k-~--n~~~~~~~~~~r~~lA~alllls~G-iP~i~~GdE~grs~~gnnn~Ycq~~~~D~~p~ 645 (877)
T 3faw_A 575 NL-----TLHDVIAKSIN-K--DPKVAEEDIHRRLRLGNVMILTSQG-TAFIHSGQEYGRTKRLLNPDYMTKVSDDKLPN 645 (877)
T ss_dssp SS-----CHHHHHHHHHT-C--CHHHHHHHHHHHHHHHHHHHHTSSS-EEEEETTTTTTCCCBCCCGGGSSCCCGGGCCT
T ss_pred CH-----HHHHHHHHHHC-C--CCCCCHHHHHHHHHHHHHHHHHCCC-CCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 41-----47766223314-7--8666779999999999999985688-03144634440666787532234443334443
Q ss_pred --------------CCCCCCCCCCCCCCCCCCCCC----CCCCHHHHHHHHHHHHHHHCCCCCCCCC-----EEEEECC-
Q ss_conf --------------999998765633455310001----2573199999999999984732226994-----2796249-
Q 002609 750 --------------PMPSNNFSFSLANRHWDLLAN----RLHSNLYSFDQELMKLDENAKVLLRGSP-----SVHHVND- 805 (900)
Q Consensus 750 --------------p~~~n~~s~~~~~~~W~l~~~----~~~~~L~~f~k~Li~LRk~~~aL~~g~~-----~~~~~~~- 805 (900)
-+.+++.+...++++|+..++ +.+..+++|+++||+||+++|+|+.+.. .+.+...
T Consensus 646 k~~~~d~p~~~~~f~~nsy~s~d~in~~DW~~~~~~~~~~~~~~l~~~~k~Li~lRk~~palr~~~~~~i~~~v~~~~~~ 725 (877)
T 3faw_A 646 KATLIEAVKEYPYFIHDSYDSSDAINHFDWAAATDNNKHPISTKTQAYTAGLITLRRSTDAFRKLSKAEIDREVSLITEV 725 (877)
T ss_dssp TEEECTTCSSSCEEESCCTTCCHHHHSCCHHHHHCTTTCHHHHHHHHHHHHHHHHHHHCGGGSCSCHHHHHHHCEESSCT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHCCCHHHHCCCEEEECCC
T ss_conf 21112443333433456657766432235542223334443078999999999998659564277657626735997589
Q ss_pred -------CCEEEEEEC-----CCEEEEEECCCCCCCCCEEEECCCC----CEEEEEECCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf -------982999983-----8599999699999654149720589----708999528976447766323543100000
Q 002609 806 -------AKMVICYMR-----GPLVFIFNFHPTDSYEDYSVGVEEA----GEYQIILNTDESKFGGQGLIKEHQYLQRTI 869 (900)
Q Consensus 806 -------~~~Viaf~R-----~~llvV~Nf~~~~s~~~y~i~vp~~----G~y~~vl~td~~~~gG~~~~~~~~~~~~~~ 869 (900)
.+.+++|.+ ..++|++|++.+. . .+.+|.. +.|++++++....-.. ......
T Consensus 726 ~~~~~~~~~~vlay~~~~~~~~~~lVv~N~~~~~--~--~~~Lp~~~~~~~~w~vl~dt~~~~~~~--~~~~~g------ 793 (877)
T 3faw_A 726 GQGDIKEKDLVIAYQTIDSKGDIYAVFVNADSKA--R--NVLLGEKYKHLLKGQVIVDADQAGIKP--ISTPRG------ 793 (877)
T ss_dssp TSTTCCSEESEEEEEEECTTCCEEEEEEECSSSC--E--EEECHHHHGGGGGSEEEECSSCBSSSC--CSSCSS------
T ss_pred CCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCE--E--EEECCCCCCCCCCEEEEECCCCCCCCC--CCCCCC------
T ss_conf 9877676787899999889999899999089987--9--998899756773379996788667654--445555------
Q ss_pred ECCCCCCCEEEEEEECCCEEEEEEECC
Q ss_conf 010159650399997672799998713
Q 002609 870 SKRVDGLRNCIEVPLPSRTAQVYKLSR 896 (900)
Q Consensus 870 ~~~~~~~~~~~~i~LP~~sa~Vl~~~~ 896 (900)
.... ...|+|+|+|++||+...
T Consensus 794 -~~~~----~~~v~L~P~sa~VL~~~~ 815 (877)
T 3faw_A 794 -VHFE----KDSLLIDPLTAIVIKVGK 815 (877)
T ss_dssp -EEEC----SSEEEECTTEEEEEEEC-
T ss_pred -CCCC----CCEEEECCCEEEEEEECC
T ss_conf -3222----787998884999999856
No 5
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=1.00 E-value=1 Score=659.48 Aligned_cols=539 Identities=18% Similarity=0.248 Sum_probs=390.7
Q ss_pred CCCCCCEEEECCCEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEEC-CCCEEEEEECCCCCCCEEEEEEECCCCCEEEC
Q ss_conf 99999908949963999985779927999022899997523310106-84089999189999979999998899980203
Q 002609 279 LPSNLPYDVIDNGKDYDVFNVASDPRWQEKFRSKEPPIPYWLETRKG-RKAWLKKYTPGIPHGSKYRVYFNTPDGPLERI 357 (900)
Q Consensus 279 ~g~~lp~~~~~~g~~f~l~sp~a~~V~l~l~~~~~~~~~~~~~m~~~-~~vW~~~~~~~~~~g~~Y~~~i~~~~g~~~~~ 357 (900)
.|.+|+|++.++|++|+||||.|++|+|++|+.........++|++. .++| +++++++.+|..|+|+|...+.....+
T Consensus 314 ~g~~lGa~~~~~gv~F~vwaP~A~~V~l~lf~~~~~~~~~~~~m~~~~~gvW-~~~v~~~~~g~~Y~y~v~~~g~~~~~~ 392 (921)
T 2wan_A 314 SGNDLGNVYSKDATSFRVWAPTASNVQLLLYNSEKGSITKQLEMQKSDNGTW-KLQVSGNLENWYYLYQVTVNGTTQTAV 392 (921)
T ss_dssp CCSCCEEEECSSEEEEEEECTTCSEEEEEEESSSSSCCSEEEECEECGGGEE-EEEEESCCTTCEEEEEEECSSCEEEEC
T ss_pred CCCCCEEEEECCEEEEEEECCCCCEEEEEEEECCCCCCCEEEECEECCCCEE-EEEECCCCCCCEEEEEEEECCEEEEEC
T ss_conf 4888504997996999999999988899998289887576895862899889-999826889988999999499679955
Q ss_pred CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC-CC--CCCCCEEEEEECCCCCCCC-----CCCCHHHHHHH-----
Q ss_conf 78542124599999862675279963324336789-99--9999159998507568999-----87884537875-----
Q 002609 358 PAWATYVQPDADGKEAFAIHWEPSPEFAYKWRNTR-PK--VPKSLRIYECHVGISGSKP-----KISSFNEFTEK----- 424 (900)
Q Consensus 358 dpya~~~~~~~~~~~~~~~~~~p~~~~~~~w~~~~-p~--~p~~~iIYE~Hvg~~~~~~-----~~Gtf~g~~ek----- 424 (900)
||||+.+.... . .+++.++....+++|+.++ |. .+++++|||+||+.|+..+ ..|||.+++++
T Consensus 393 DPya~~~~~~~--~--~s~v~d~~~~~~~~W~~~~~p~~~~~~~~vIYEihv~~F~~~~~~g~~~~Gt~~g~~e~~~~~l 468 (921)
T 2wan_A 393 DPYARAISVNA--T--RGMIVDLKATDPAGWQGDHEQTPANPVDEVIYEAHVRDFSIDANSGMKNKGKYLAFTEHGTKGP 468 (921)
T ss_dssp CTTCSSBSGGG--S--SEECCCGGGGSCTTGGGCCCCCCSSGGGCCEEEECHHHHHCSTTSCCSSTTSGGGGGCCSCBCG
T ss_pred CCCCEEECCCC--C--CEEEECCCCCCCCCCCCCCCCCCCCCHHCEEEEEECCCCCCCCCCCCCCCCCEEHEECCCCCCC
T ss_conf 87520102589--8--5699756326853232245888898113489999738100799999788887101113465553
Q ss_pred -----HHHHHHHCCCCEEEEEEEEECCC-------CCCCCCCCCCCCCCCCCCCC-------HHHHHHHHHHHHHCCCEE
Q ss_conf -----45588981965389801233279-------89988754787655799999-------999999999995358479
Q 002609 425 -----VLPHVKEAGYNVIQLFGVVEHKD-------YFTVGYRVTNLYAVSSRYGT-------PDDFKRLVDEAHGLGLLV 485 (900)
Q Consensus 425 -----~L~yLk~LGvnaIqLmPI~e~~~-------~~~wGY~~~nyfavd~~yGt-------~eelK~LVd~aH~~GI~V 485 (900)
.|||||+||||+||||||++++. .++|||++++||+|+++||+ ++|||+||++||++||+|
T Consensus 469 ~Gi~~~LdyLk~LGvtaI~L~Pi~e~~~~de~~~~~~~wGYd~~dy~ap~~~y~~dp~Gt~~~~dfk~LV~~aH~~GI~V 548 (921)
T 2wan_A 469 DHVKTGIDSLKELGITTVQLQPVEEFNSIDETQPDTYNWGYDPRNYNVPEGAYATTPEGTARITELKQLIQSLHQQRIGV 548 (921)
T ss_dssp GGCBCHHHHHHHHTCCEEEESCCEEESSSCTTSTTSCCCCCSEEEEEEECGGGSSCSSTTHHHHHHHHHHHHHHHTTCEE
T ss_pred CCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
T ss_conf 23101337999769988996985206765534667677689876778877322448888854999999999998769989
Q ss_pred EEEECCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCC-CCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCC
Q ss_conf 99402456656523445468899-985533798886-578777-346689999999999999999995380088863742
Q 002609 486 FLDIVHSYSAADQMVGLSQFDGS-NDCYFHTGKRGF-HKYWGT-RMFKYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLS 562 (900)
Q Consensus 486 ILDvV~NH~s~~~~~~l~~fdg~-~~~Yf~~~~~g~-~~~wg~-~~lny~~~eVr~flld~l~~Wi~eygVDGFRfD~v~ 562 (900)
|||||+||++.++. ..|++. +.+||+.++.|. .+.|+| ++||+++|+||++|+++++||++||||||||||++.
T Consensus 549 ILDvV~NHt~~~~~---~~f~~~~p~y~~~~~~~g~~~~~~g~~~dln~~~p~Vr~~i~d~l~~Wl~e~gVDGfR~Da~~ 625 (921)
T 2wan_A 549 NMDVVYNHTFDVMV---SDFDKIVPQYYYRTDSNGNYTNGSGCGNEFATEHPMAQKFVLDSVNYWVNEYHVDGFRFDLMA 625 (921)
T ss_dssp EEEECTTCCSCSSS---SHHHHHSTTTTBCBCTTSCBCCTTSSSCCBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGG
T ss_pred EEEECCCCCCCCCC---CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 99985665566443---110277887378758998634788756621438999999999999999998298879950544
Q ss_pred CCHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC----CCCCCCCCCCCCCC-CCCC
Q ss_conf 000026776456787355630026512999999999999830999899991279999----85455667998753-1145
Q 002609 563 SMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYP----GLCEPTTQGGLGFD-YFLN 637 (900)
Q Consensus 563 ~m~y~~~g~~~~~g~~~~~~~~~~d~ea~~~l~~~n~~l~~~~P~~i~IaE~~s~~p----~l~~~~~~gg~GFD-~~~n 637 (900)
++ ...+|+.+++.+++++|++++|||.|...+ .........+.||+ ..+|
T Consensus 626 ~~-------------------------~~~~~~~~~~~l~~~~p~~~ligE~w~~~~~~~~~~~~~~~~~~~gf~~~~~n 680 (921)
T 2wan_A 626 LL-------------------------GKDTMAKISNELHAINPGIVLYGEPWTGGTSGLSSDQLVTKGQQKGLGIGVFN 680 (921)
T ss_dssp GG-------------------------CHHHHHHHHHHHHHHCTTCEEEECSSCSSCCSSCTTTSCCTTTTTTTTCEEEC
T ss_pred CC-------------------------CHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHCCCCCCCCCCEEEEC
T ss_conf 36-------------------------89999999999997699638998423677754321000022556799838856
Q ss_pred CHHHHHHHHHHCCCC----------CCCCCHHHHHHHHHCC----CCCCCCEEECCCCCCCCCCCCCCHHHHHCCCCCCC
Q ss_conf 025799999870499----------9875277899976218----87766347523463356568974134520456678
Q 002609 638 LSASEMWLSFLENTP----------DHEWSMSKIVSTLVGN----GQYSDKMIMYAENHNQSISGGRSFAEILFGEISEH 703 (900)
Q Consensus 638 ~~~~d~~~~~lk~~~----------~~~~~~~~i~~~l~~n----~~~~~~~v~Y~EnHDqa~~g~~tl~~~L~~~~~~~ 703 (900)
..+.+ .+++.. ........+...+.+. ...+..+++|++|||+.+ +..++.....
T Consensus 681 d~~rd----~~~~~~f~~~~~~f~~g~~~~~~~l~~~l~~~~~~~~~~p~~~vnfv~nHD~~r-----l~d~l~~~~~-- 749 (921)
T 2wan_A 681 DNIRN----GLDGNVFDKTAQGFATGDPNQVDVIKNGVIGSIQDFTSAPSETINYVTSHDNMT-----LWDKILASNP-- 749 (921)
T ss_dssp HHHHH----HHHCCTTCTTCCCTTTTCSSCHHHHHHHHBTTTTTTCSSGGGEEECSCCSSSCC-----HHHHHHHHCT--
T ss_pred HHHHH----HHHCCCCCCCCHHHHCCCHHHHHHHHHHHHCCHHHCCCCCCEEEEEEECCCCCC-----HHHHHHHHCC--
T ss_conf 08999----874203444440445078327999999885061120558440688630367752-----7777664378--
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 99923555430399999999999907993064133124699998789999987656334553100012573199999999
Q 002609 704 SPDTNNLLLRGCSLHKMIRLITFTIGGHAYLNFMGNEFGHPKRVEFPMPSNNFSFSLANRHWDLLANRLHSNLYSFDQEL 783 (900)
Q Consensus 704 ~~~~~~~i~r~~~l~kl~~ll~l~l~G~~Plif~G~EfG~~~~~d~p~~~n~~s~~~~~~~W~l~~~~~~~~L~~f~k~L 783 (900)
..+ .....++.|++.+++|+++| +||||||+|+|+++..+ ...++.....++++|...+ .++.+++|+|+|
T Consensus 750 ~~~----~~~~~~~~rla~a~llt~pG-~P~iy~GdE~g~~~~g~--~n~y~~~d~~~~~~W~~~~--~~~~l~~~~~~L 820 (921)
T 2wan_A 750 SDT----EADRIKMDELAHAVVFTSQG-VPFMQGGEEMLRTKGGN--DNSYNAGDSVNQFDWSRKA--QFKDVFDYFSSM 820 (921)
T ss_dssp TSC----HHHHHHHHHHHHHHHHHSBS-EEEEETTGGGTCCCTTC--SCCTTCCHHHHSCCTHHHH--HTHHHHHHHHHH
T ss_pred CCC----HHHHHHHHHHHHHHHHHCCC-CCEEECCHHHCCCCCCC--CCCCCCCCCCCCCCCCCCC--CCHHHHHHHHHH
T ss_conf 988----99999999999999987799-85898552004567898--7665786544435776532--225999999999
Q ss_pred HHHHHHCCCCCCCCCE-----EEEECCCCEEEEEECC---------CEEEEEECCCCCCCCCEEEECCCCCEEEEEECCC
Q ss_conf 9999847322269942-----7962499829999838---------5999996999996541497205897089995289
Q 002609 784 MKLDENAKVLLRGSPS-----VHHVNDAKMVICYMRG---------PLVFIFNFHPTDSYEDYSVGVEEAGEYQIILNTD 849 (900)
Q Consensus 784 i~LRk~~~aL~~g~~~-----~~~~~~~~~Viaf~R~---------~llvV~Nf~~~~s~~~y~i~vp~~G~y~~vl~td 849 (900)
|+||+++|+|+.+... +.+...++.+++|.|. .++|++|++.++ ..+.+| .|.|+++++++
T Consensus 821 i~lRk~~paL~~g~~~~i~~~~~~~~~~~~vlaf~r~~~~~~~~~~~~lVv~N~~~~~----~~~~Lp-~g~w~~~~~~~ 895 (921)
T 2wan_A 821 IHLRNQHPAFRMTTADQIKQNLTFLESPTNTVAFELKNYANHDTWKNIIVMYNPNKTS----QTLNLP-SGDWTIVGLGD 895 (921)
T ss_dssp HHHHHHCGGGGCCSHHHHHHHEEECCCCTTCEEEEECSSGGGCSSSCEEEEEECSSSC----EEEECC-SSCEEEEEETT
T ss_pred HHHHHHCHHHHCCCHHHHCCCEEEECCCCCEEEEEEECCCCCCCCCEEEEEEECCCCC----EEEECC-CCCEEEEECCC
T ss_conf 9998639665078544415616996289969999996577887898699999898987----799879-98079997388
Q ss_pred CCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEEEEE
Q ss_conf 764477663235431000000101596503999976727999987
Q 002609 850 ESKFGGQGLIKEHQYLQRTISKRVDGLRNCIEVPLPSRTAQVYKL 894 (900)
Q Consensus 850 ~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~i~LP~~sa~Vl~~ 894 (900)
.....+. . ... . .++|||+|++||.+
T Consensus 896 ~~~~~~~------~--------~~~----g-~~~l~p~s~~Vl~~ 921 (921)
T 2wan_A 896 QIGEKSL------G--------HVM----G-NVQVPAISTLILKQ 921 (921)
T ss_dssp EESSSCS------C--------EEC----S-EEEECSSEEEEEEC
T ss_pred CCCCCCC------C--------CCC----C-EEEECCCEEEEEEC
T ss_conf 7776664------4--------448----6-69989889999979
No 6
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=1.00 E-value=1 Score=654.57 Aligned_cols=616 Identities=19% Similarity=0.263 Sum_probs=412.8
Q ss_pred CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC-CCCC
Q ss_conf 678999740878987305777788864311344555523302202999976300002588410000000012347-9999
Q 002609 203 YDKGDSGVSIQEIFKRANDEYWEPGEDRFVKNRFELPAKLYEQLFGPNGPQTLQELEEMPDAQTTYKAWKEQHKD-DLPS 281 (900)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~ 281 (900)
+|++++.|+|+++.... -+....++++|...+++|++.+......+ ..+|+..++. .+..
T Consensus 260 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~d~~~~y~~ 320 (1014)
T 2ya1_A 260 TNHLGNKVTITDVAIDE------AGKKVTYSGDFSDTKHPYTVSYNSDQFTT-------------KTSWRLKDETYSYDG 320 (1014)
T ss_dssp EC------------CBT------TTTEEC-------CCSCCEEEETTEEEEC-------------CCCHHHHHHHHCCCS
T ss_pred ECCCCCEEEEEEEEECC------CCCEEEEEEECCCCCCCEEEEECCCCEEE-------------ECCCEECCCCCCCCC
T ss_conf 31589677644457427------87428997103455786799977862542-------------014200321136789
Q ss_pred CCCEEEECCC--EEEEEECCCCCCEEEEEECCCCCCC-CEEEEEEEC-CCCEEEEEECC-------CCCCCEEEEEEECC
Q ss_conf 9990894996--3999985779927999022899997-523310106-84089999189-------99997999999889
Q 002609 282 NLPYDVIDNG--KDYDVFNVASDPRWQEKFRSKEPPI-PYWLETRKG-RKAWLKKYTPG-------IPHGSKYRVYFNTP 350 (900)
Q Consensus 282 ~lp~~~~~~g--~~f~l~sp~a~~V~l~l~~~~~~~~-~~~~~m~~~-~~vW~~~~~~~-------~~~g~~Y~~~i~~~ 350 (900)
+|+|++.++| ++|+||||+|++|+||+|+...... ...++|.+. +++| ++++++ ..+|..|+|+|...
T Consensus 321 ~lGa~~~~~g~gv~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~~~gvW-~~~v~~~~~~g~~~~~G~~Y~y~i~~~ 399 (1014)
T 2ya1_A 321 KLGADLKEEGKQVDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKGERGTW-KQTLDSTNKLGITDFTGYYYQYQIERQ 399 (1014)
T ss_dssp CCEEEEEGGGTEEEEEEECTTCSEEEEEEECSSCTTSEEEEEECEECGGGEE-EEEECTTCSSCCSCCTTCEEEEEEEET
T ss_pred CCCCEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCEEEECCCCCCCEE-EEEECCCCCCCCCCCCCCEEEEEEEEC
T ss_conf 8555796899789999999999989999987898776524773624889889-999756456885445786789999809
Q ss_pred CCCEEECCCCCCCCCCCC--------CCCCCEEEECCCCCC--CCCCCCCCCCCC-CCCCEEEEEECCCCCCCC------
Q ss_conf 998020378542124599--------999862675279963--324336789999-999159998507568999------
Q 002609 351 DGPLERIPAWATYVQPDA--------DGKEAFAIHWEPSPE--FAYKWRNTRPKV-PKSLRIYECHVGISGSKP------ 413 (900)
Q Consensus 351 ~g~~~~~dpya~~~~~~~--------~~~~~~~~~~~p~~~--~~~~w~~~~p~~-p~~~iIYE~Hvg~~~~~~------ 413 (900)
+.....+||||+++.... ......++++++... ..++|....+.. +++++|||+|||.|+.++
T Consensus 400 ~~~~~~~DPYa~~~~~~~~~~~~~~~~~~~~~s~vvd~~~~~~~~~~~~~~~~~~~~~~~vIYE~hv~~ft~~~~~~~~~ 479 (1014)
T 2ya1_A 400 GKTVLALDPYAKSLAAWNSDDSKIDDAHKVAKAAFVDPAKLGPQDLTYGKIHNFKTREDAVIYEAHVRDFTSDPAIAKDL 479 (1014)
T ss_dssp TEEEEECCTTCSSBCCCBGGGTTSCGGGSSCCEECCCGGGSSCTTCCCCCCTTCSSGGGCCEEEECHHHHHCCGGGTTTC
T ss_pred CEEEEECCCCCEECCCCCCCCCCCCCCCCCCCEEEECCHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
T ss_conf 80799638550421455532235666677642899772213876542234766667555579999568777898766323
Q ss_pred --CCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCC------------------CCCCCCCCCCCCCCCCCCCC------
Q ss_conf --8788453787545588981965389801233279------------------89988754787655799999------
Q 002609 414 --KISSFNEFTEKVLPHVKEAGYNVIQLFGVVEHKD------------------YFTVGYRVTNLYAVSSRYGT------ 467 (900)
Q Consensus 414 --~~Gtf~g~~ek~L~yLk~LGvnaIqLmPI~e~~~------------------~~~wGY~~~nyfavd~~yGt------ 467 (900)
..|||++++++ |||||+||||+||||||++++. .++|||++.+||+|+++||+
T Consensus 480 ~~~~Gt~~gl~~~-LdyLk~LGvtaV~L~Pv~~~~~~~e~~~~~~~~~y~~~~~~ynwGY~~~~y~a~~~~ygt~p~~~~ 558 (1014)
T 2ya1_A 480 TKPFGTFEAFIEK-LDYLKDLGVTHIQLLPVLSYYFVNELKNHERLSDYASSNSNYNWGYDPQNYFSLTGMYSSDPKNPE 558 (1014)
T ss_dssp SSCTTSHHHHHTT-HHHHHHHTCSEEEESCCBCBSSCBGGGTTSCCCSCCSSSCSCCCSCSBSCSSSBCSTTCSCTTCTT
T ss_pred CCCCCCHHHHHHH-HHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 4778599999987-689997699849943722045556211222223234576776667776767566621047876666
Q ss_pred --HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf --99999999999535847999402456656523445468899-985533798886-57877734668999999999999
Q 002609 468 --PDDFKRLVDEAHGLGLLVFLDIVHSYSAADQMVGLSQFDGS-NDCYFHTGKRGF-HKYWGTRMFKYDDLDVLHFLLSN 543 (900)
Q Consensus 468 --~eelK~LVd~aH~~GI~VILDvV~NH~s~~~~~~l~~fdg~-~~~Yf~~~~~g~-~~~wg~~~lny~~~eVr~flld~ 543 (900)
++|||+||++||++||+||||||+||++.++ .|++. +.+|...+..|. ...|+++.+|+++++|+++|+++
T Consensus 559 ~~~~efk~lV~~~H~~GI~VIlDvV~NHt~~~~-----~~~~~~~~yy~~~~~~g~~~~~~~~~~l~~~~~~vr~~i~d~ 633 (1014)
T 2ya1_A 559 KRIAEFKNLINEIHKRGMGAILDVVYNHTAKVD-----LFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHHMTKRLLIDS 633 (1014)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEECTTCCSCHH-----HHHTTSTTTSBCBCTTCCBCEETTEECBCTTSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC-----CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 549999999999987699999997125456630-----125688871587079998655778887676899999999999
Q ss_pred HHHHHHHCCCCEEEECCCCCCHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCC
Q ss_conf 99999953800888637420000267764567873556300265129999999999998309998999912799998545
Q 002609 544 LNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCE 623 (900)
Q Consensus 544 l~~Wi~eygVDGFRfD~v~~m~y~~~g~~~~~g~~~~~~~~~~d~ea~~~l~~~n~~l~~~~P~~i~IaE~~s~~p~l~~ 623 (900)
++||++||||||||||+++++ ...+|..++..+++++|++++|||.|...++...
T Consensus 634 l~~W~~e~gvDGfR~D~~~~~-------------------------~~~~~~~~~~~~~~~~p~~~ligE~W~~~~g~~~ 688 (1014)
T 2ya1_A 634 IKYLVDTYKVDGFRFDMMGDH-------------------------DAASIEEAYKAARALNPNLIMLGEGWRTYAGDEN 688 (1014)
T ss_dssp HHHHHHHHCCCEEEETTGGGS-------------------------BHHHHHHHHHHHHHHCTTCEEEECCCSCCCCSTT
T ss_pred HHHHHHHCCCEEEEEECCCCC-------------------------CHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC
T ss_conf 999998539409999687887-------------------------9899999999999749976999854255567654
Q ss_pred CCCCCCCCCCCCC------CCHHHHHHHHHHCCCCC----------CCCCHHHHHHHHHCC-----CCCCCCEEECCCCC
Q ss_conf 5667998753114------50257999998704999----------875277899976218-----87766347523463
Q 002609 624 PTTQGGLGFDYFL------NLSASEMWLSFLENTPD----------HEWSMSKIVSTLVGN-----GQYSDKMIMYAENH 682 (900)
Q Consensus 624 ~~~~gg~GFD~~~------n~~~~d~~~~~lk~~~~----------~~~~~~~i~~~l~~n-----~~~~~~~v~Y~EnH 682 (900)
... ..++..+ ...+.+.+++++++... ....+..+...+.+. ...+..+|+|++||
T Consensus 689 ~~~---~~~~~~w~~~~~~~~~f~d~~r~~l~~~~~~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~~p~~~vnfv~nH 765 (1014)
T 2ya1_A 689 MPT---KAADQDWMKHTDTVAVFSDDIRNNLKSGYPNEGQPAFITGGKRDVNTIFKNLIAQPTNFEADSPGDVIQYIAAH 765 (1014)
T ss_dssp CCC---CBSSGGGGGGCSSSEEECHHHHHHHSCCTTSTTCCCTTTTCCEEHHHHHHHHTTCCSSSCCSSGGGEEECSCCS
T ss_pred CCC---CCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHEEEEECC
T ss_conf 312---44540045449952413179999986026644531222167532999999875284333567803505742037
Q ss_pred CCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC------------
Q ss_conf 35656897413452045667899923555430399999999999907993064133124699998789------------
Q 002609 683 NQSISGGRSFAEILFGEISEHSPDTNNLLLRGCSLHKMIRLITFTIGGHAYLNFMGNEFGHPKRVEFP------------ 750 (900)
Q Consensus 683 Dqa~~g~~tl~~~L~~~~~~~~~~~~~~i~r~~~l~kl~~ll~l~l~G~~Plif~G~EfG~~~~~d~p------------ 750 (900)
|+.+ +.+.+.... .......+......++.+++.+++|+++| +||||||+|||+++.+..|
T Consensus 766 D~~~-----l~d~v~~~~-~~~~~~~~~~~~~~~~~rla~~lll~spG-iP~i~~GdE~g~t~~~~d~~~r~~~~~g~~~ 838 (1014)
T 2ya1_A 766 DNLT-----LFDIIAQSI-KKDPSKAENYAEIHRRLRLGNLMVLTAQG-TPFIHSGQEYGRTKQFRNPAYRTPVAEDKVP 838 (1014)
T ss_dssp SSSC-----HHHHHHHHH-TCCTTSHHHHHHHHHHHHHHHHHHHTSSS-EEEEETTTTTTCCCBCCCGGGSSCCCTTTCC
T ss_pred CCCC-----CCCHHHHHC-CCCCCCCHHHHHHHHHHHHHHHHHHHCCC-CCEEEECHHHCCCCCCCCHHHHHHHHCCCCC
T ss_conf 8876-----410003203-57843200047899999999999986899-8489823543466788872565422113331
Q ss_pred --------------------CCCCCCCCCCCCCCCCCCCCC----CCCHHHHHHHHHHHHHHHCCCCCCCCCE-----EE
Q ss_conf --------------------999987656334553100012----5731999999999999847322269942-----79
Q 002609 751 --------------------MPSNNFSFSLANRHWDLLANR----LHSNLYSFDQELMKLDENAKVLLRGSPS-----VH 801 (900)
Q Consensus 751 --------------------~~~n~~s~~~~~~~W~l~~~~----~~~~L~~f~k~Li~LRk~~~aL~~g~~~-----~~ 801 (900)
+.+.+.+...++++|+...+. .++.+++|+|+||+||+++|+|+.+... +.
T Consensus 839 e~~~~~~~~~g~~f~~~~~~~dsy~~~~~~n~ldW~~~~~~~~~~~~~~l~~f~r~Li~LRk~~pal~~g~~~~~~~~~~ 918 (1014)
T 2ya1_A 839 NKSHLLRDKDGNPFDYPYFIHDSYDSSDAVNKFDWTKATDGKAYPENVKSRDYMKGLIALRQSTDAFRLKSLQDIKDRVH 918 (1014)
T ss_dssp TTEEEEECTTSCEEEEEEEESCCTTCCHHHHCCCHHHHHCTTTCHHHHHHHHHHHHHHHHHHHCGGGSCSCHHHHHHHEE
T ss_pred CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCEE
T ss_conf 01111010235532343334567899765123578633343345014999999999999985193124886233157459
Q ss_pred EEC--------CCCEEEEEECC-----CEEEEEECCCCCCCCCEEEECCCC----CEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 624--------99829999838-----599999699999654149720589----7089995289764477663235431
Q 002609 802 HVN--------DAKMVICYMRG-----PLVFIFNFHPTDSYEDYSVGVEEA----GEYQIILNTDESKFGGQGLIKEHQY 864 (900)
Q Consensus 802 ~~~--------~~~~Viaf~R~-----~llvV~Nf~~~~s~~~y~i~vp~~----G~y~~vl~td~~~~gG~~~~~~~~~ 864 (900)
+.. ..+.+++|.|. .++|++|++.++ . .+.+|.. +.|.+++++... +...+....
T Consensus 919 ~~~~~g~~~~~~~~~v~a~~r~~~~~~~~lVv~N~~~~~--~--~~~lp~~~~~~~~~~~~~d~~~~---~~~~~~~~~- 990 (1014)
T 2ya1_A 919 LITVPGQNGVEKEDVVIGYQITAPNGDIYAVFVNADEKA--R--EFNLGTAFAHLRNAEVLADENQA---GPVGIANPK- 990 (1014)
T ss_dssp ESSCTTSTTCCSEESEEEEEEECTTSCEEEEEEECSSSC--E--EEECTTTTGGGGGCEEEECSSCB---CSSCCSSCS-
T ss_pred EECCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCC--E--EEECCCCCCCCCCEEEEEECCCC---CCCCCCCCC-
T ss_conf 975799876667895899999789999899999499986--7--99789865677743899868888---865434455-
Q ss_pred CEEEEECCCCCCCEEEEEEECCCEEEEEEECC
Q ss_conf 00000010159650399997672799998713
Q 002609 865 LQRTISKRVDGLRNCIEVPLPSRTAQVYKLSR 896 (900)
Q Consensus 865 ~~~~~~~~~~~~~~~~~i~LP~~sa~Vl~~~~ 896 (900)
.... ....++|||+|++||..++
T Consensus 991 -----~~~~----~~~~~~l~~~s~~Vl~~~~ 1013 (1014)
T 2ya1_A 991 -----GLEW----TEKGLKLNALTATVLRVSQ 1013 (1014)
T ss_dssp -----SEEE----CSSEEEECTTEEEEEEECC
T ss_pred -----CCCC----CCCEEEECCCEEEEEEECC
T ss_conf -----5235----5998998589999999878
No 7
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=1.00 E-value=1 Score=638.93 Aligned_cols=572 Identities=16% Similarity=0.187 Sum_probs=395.2
Q ss_pred CCCCCEEEECCCCCCCCCCCCCCCCC-CCCCHHCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCEEEEEECCCCCCC
Q ss_conf 55233022029999763000025884-10000000012347999999908949963999985779927999022899997
Q 002609 238 LPAKLYEQLFGPNGPQTLQELEEMPD-AQTTYKAWKEQHKDDLPSNLPYDVIDNGKDYDVFNVASDPRWQEKFRSKEPPI 316 (900)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~lp~~~~~~g~~f~l~sp~a~~V~l~l~~~~~~~~ 316 (900)
...+.|++.......+. +.. ..++++.|.. +.++.++|+|++.++|++|+||||.|++|+|+++.....
T Consensus 68 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~d~--~~~y~~~lGa~~~~~~~~f~vwap~a~~V~l~~~~~~~~-- 137 (718)
T 2e8y_A 68 TFGKIHCVRASSGHKTD------LQIGAVIRTAAFDD--EFYYDGELGAVYTADHTVFKVWAPAATSAAVKLSHPNKS-- 137 (718)
T ss_dssp CTTSCCEEECTTSCEEE------CEECGGGGSHHHHH--HHCCCSCCEEEECSSEEEEEEECTTCSEEEEEEECTTSC--
T ss_pred CCCCEEEEEECCCCEEC------CCCCCEECCCCCHH--HCCCCCCCCCEEECCCEEEEEECCCCCEEEEEEECCCCC--
T ss_conf 88973899988973102------22353103410022--215578999788689489999999998999999908985--
Q ss_pred CEEEEEEEC-CCCEEEEEECCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 523310106-8408999918999997999999889998020378542124599999862675279963324336789999
Q 002609 317 PYWLETRKG-RKAWLKKYTPGIPHGSKYRVYFNTPDGPLERIPAWATYVQPDADGKEAFAIHWEPSPEFAYKWRNTRPKV 395 (900)
Q Consensus 317 ~~~~~m~~~-~~vW~~~~~~~~~~g~~Y~~~i~~~~g~~~~~dpya~~~~~~~~~~~~~~~~~~p~~~~~~~w~~~~p~~ 395 (900)
...++|++. +++| +++++++.+|..|+|+|...+.....+||||+.+... +. .+++.++....+.+| .+.+..
T Consensus 138 ~~~~~m~~~~~g~w-~~~v~~~~~g~~Y~f~v~~~g~~~~~~DPya~~~~~~--~~--~s~v~d~~~~~~~~w-~~~~~~ 211 (718)
T 2e8y_A 138 GRTFQMTRLEKGVY-AVTVTGDLHGYEYLFCICNNSEWMETVDQYAKAVTVN--GE--KGVVLRPDQMKWTAP-LKPFSH 211 (718)
T ss_dssp CEEEECEECGGGEE-EEEEESCCTTCEEEEEEEETTEEEEECCTTCSSBCGG--GC--SEECCCCCCCCCCCC-CCCCSC
T ss_pred CEEEECCCCCCCEE-EEEECCCCCCCEEEEEEEECCEEEEECCCCCCCCCCC--CC--CCEEECCCCCCCCCC-CCCCCC
T ss_conf 55885834999989-9997889999718999996995788548762511458--98--446976311587566-777788
Q ss_pred CCCCEEEEEECCCCCCCC-----CCCCHHHHHHH----------HHHHHHHCCCCEEEEEEEEECCCC--------CCCC
Q ss_conf 999159998507568999-----87884537875----------455889819653898012332798--------9988
Q 002609 396 PKSLRIYECHVGISGSKP-----KISSFNEFTEK----------VLPHVKEAGYNVIQLFGVVEHKDY--------FTVG 452 (900)
Q Consensus 396 p~~~iIYE~Hvg~~~~~~-----~~Gtf~g~~ek----------~L~yLk~LGvnaIqLmPI~e~~~~--------~~wG 452 (900)
+++++|||+||+.|+..+ ..|||.+++++ .|||||+||||+||||||++++.. ++||
T Consensus 212 ~~~~viYei~v~~F~~~~~~g~~~~G~~~g~~e~~~~~l~Gi~~~LdyLk~LGvtaI~L~Pi~~~~~~de~~~~~~~~wG 291 (718)
T 2e8y_A 212 PVDAVIYETHLRDFSIHENSGMINKGKYLALTETDTQTANGSSSGLAYVKELGVTHVELLPVNDFAGVDEEKPLDAYNWG 291 (718)
T ss_dssp GGGCCEEEECHHHHHHSTTSCCSSTTSGGGGGCTTCBCTTSCBCHHHHHHHHTCSEEEESCCEEESSSCTTSGGGCCCCC
T ss_pred HHHCEEEEEEHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 03568999855785479988978898710000036565434023548999769888997872226764445665667678
Q ss_pred CCCCCCCCCCCCCCC--------HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCC-C
Q ss_conf 754787655799999--------99999999999535847999402456656523445468899-9855337988865-7
Q 002609 453 YRVTNLYAVSSRYGT--------PDDFKRLVDEAHGLGLLVFLDIVHSYSAADQMVGLSQFDGS-NDCYFHTGKRGFH-K 522 (900)
Q Consensus 453 Y~~~nyfavd~~yGt--------~eelK~LVd~aH~~GI~VILDvV~NH~s~~~~~~l~~fdg~-~~~Yf~~~~~g~~-~ 522 (900)
|+|.+||+|+++||+ ++|||+||++||++||+||||+|+||++..+. ..|++. +.+||+.++.|.. +
T Consensus 292 Yd~~dy~a~~~~yg~~p~~g~~~~~dfk~LV~~aH~~GI~VIlDvV~NHt~~~~~---~~f~~~~p~y~~~~~~~g~~~n 368 (718)
T 2e8y_A 292 YNPLHFFAPEGSYASNPHDPQTRKTELKQMINTLHQHGLRVILDVVFNHVYKREN---SPFEKTVPGYFFRHDECGKPSN 368 (718)
T ss_dssp CSEEEEEEECSTTSSCSSSHHHHHHHHHHHHHHHHHTTCEEEEEECTTCCSSGGG---SHHHHHSTTTSBCBCTTSSBCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC---CCCCCCCCCEEEECCCCCCCCC
T ss_conf 7866787748423568777654499999999999987999999995266567664---3201558870786189986347
Q ss_pred CCCC-CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHH
Q ss_conf 8777-346689999999999999999995380088863742000026776456787355630026512999999999999
Q 002609 523 YWGT-RMFKYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEIL 601 (900)
Q Consensus 523 ~wg~-~~lny~~~eVr~flld~l~~Wi~eygVDGFRfD~v~~m~y~~~g~~~~~g~~~~~~~~~~d~ea~~~l~~~n~~l 601 (900)
.+++ ++||+++|+||++|+++++||+++|||||||||++.++ ...+|+.++..+
T Consensus 369 ~~~~g~dln~~np~Vr~~i~d~~~~Wl~e~gVDGfR~D~~~~~-------------------------~~~~~~~~~~~~ 423 (718)
T 2e8y_A 369 GTGVGNDIASERRMARKFIADCVVYWLEEYNVDGFRFDLLGIL-------------------------DIDTVLYMKEKA 423 (718)
T ss_dssp TTSSSCCBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGS-------------------------BHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC-------------------------CHHHHHHHHHHH
T ss_conf 8875664365999999999999999999819999999563438-------------------------999999999999
Q ss_pred HHCCCCEEEEEECCCCCCCCCC---CCCCCCCCCC--CCCCCHHHHHHHHHHCCCC----C------CCCCHHHHHHHHH
Q ss_conf 8309998999912799998545---5667998753--1145025799999870499----9------8752778999762
Q 002609 602 HALHPNIITIAEDATYYPGLCE---PTTQGGLGFD--YFLNLSASEMWLSFLENTP----D------HEWSMSKIVSTLV 666 (900)
Q Consensus 602 ~~~~P~~i~IaE~~s~~p~l~~---~~~~gg~GFD--~~~n~~~~d~~~~~lk~~~----~------~~~~~~~i~~~l~ 666 (900)
++++|++++|||.|...+.+.. .....+.+|+ ..+|.. +++.+++.. . .......+...+.
T Consensus 424 ~~~~p~~~ligE~w~~~~~~~~~~~~~~~~~~~~~~~~~~n~~----~~~~~~~~~f~~~~~~f~~g~~~~~~~l~~~l~ 499 (718)
T 2e8y_A 424 TKAKPGILLFGEGWDLATPLPHEQKAALANAPRMPGIGFFNDM----FRDAVKGNTFHLKATGFALGNGESAQAVMHGIA 499 (718)
T ss_dssp HHHSTTCEEEECCCCCCCSSCGGGBCCGGGGGGCTTCEEECHH----HHHHHHCCSSSTTCCCGGGTCGGGHHHHHHHHB
T ss_pred HHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECHH----HHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHH
T ss_conf 8758984999864477776543210132455689825897708----888763323554556302587316999999975
Q ss_pred CC---------CCCCCCEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 18---------877663475234633565689741345204566789992355543039999999999990799306413
Q 002609 667 GN---------GQYSDKMIMYAENHNQSISGGRSFAEILFGEISEHSPDTNNLLLRGCSLHKMIRLITFTIGGHAYLNFM 737 (900)
Q Consensus 667 ~n---------~~~~~~~v~Y~EnHDqa~~g~~tl~~~L~~~~~~~~~~~~~~i~r~~~l~kl~~ll~l~l~G~~Plif~ 737 (900)
+. ...+...++|++|||+.+ +.+++..... ..+. ....++.|++.+++|+++| +|||||
T Consensus 500 ~~~~~~~~~~~~~~~~~~vnfv~nHD~~r-----l~~~~~~~~~--~~~~----~~~~~~~kla~a~ll~~~G-~P~iy~ 567 (718)
T 2e8y_A 500 GSSGWKALAPIVPEPSQSINYVESHDNHT-----FWDKMSFALP--QEND----SRKRSRQRLAVAIILLAQG-VPFIHS 567 (718)
T ss_dssp TTSCBTTBCCSSSSGGGEEECSCCSSSSC-----HHHHHHHHCT--TCCH----HHHHHHHHHHHHHHHTSBS-EEEEET
T ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCCH-----HHHHHHCCCC--CCCH----HHHHHHHHHHHHHHHHCCC-CCEEEE
T ss_conf 57332445534589404789884488860-----7766301588--8788----9999999999999987789-727760
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCE-----EEEECCCCEEEEE
Q ss_conf 31246999987899999876563345531000125731999999999999847322269942-----7962499829999
Q 002609 738 GNEFGHPKRVEFPMPSNNFSFSLANRHWDLLANRLHSNLYSFDQELMKLDENAKVLLRGSPS-----VHHVNDAKMVICY 812 (900)
Q Consensus 738 G~EfG~~~~~d~p~~~n~~s~~~~~~~W~l~~~~~~~~L~~f~k~Li~LRk~~~aL~~g~~~-----~~~~~~~~~Viaf 812 (900)
|+|+|+++... ..+.+....+++++|+..+ .+..+++|+|+||+||+++|+|+.|... +.+...++.+++|
T Consensus 568 GdE~g~~~~g~--~~~y~~~d~~~~~~W~~~~--~~~~l~~~~~~Li~lRk~~pal~~g~~~~i~~~~~~~~~~~~v~a~ 643 (718)
T 2e8y_A 568 GQEFFRTKQGV--ENSYQSSDSINQLDWDRRE--TFKEDVHYIRRLISLRKAHPAFRLRSAADIQRHLECLTLKEHLIAY 643 (718)
T ss_dssp TGGGTCCCTTC--SCCTTCCHHHHSCCHHHHH--HTHHHHHHHHHHHHHHHHCGGGGCCSHHHHHHHEEEEEECSSEEEE
T ss_pred CHHHCCCCCCC--CCCCCCCCCCCCCCCCCCC--CCCHHHHHHHHHHHHHHHCHHHCCCCHHHHCCCEEEECCCCCEEEE
T ss_conf 13117567898--7665897654646833131--3578999999999998519553168622212616993289979999
Q ss_pred ECC---------CEEEEEECCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEE
Q ss_conf 838---------59999969999965414972058970899952897644776632354310000001015965039999
Q 002609 813 MRG---------PLVFIFNFHPTDSYEDYSVGVEEAGEYQIILNTDESKFGGQGLIKEHQYLQRTISKRVDGLRNCIEVP 883 (900)
Q Consensus 813 ~R~---------~llvV~Nf~~~~s~~~y~i~vp~~G~y~~vl~td~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 883 (900)
.|. .++|++|++.++ ..+.+|..|.|++++++...... . . .. ...++
T Consensus 644 ~r~~~~~~~~~~~~lVv~N~~~~~----~~~~lp~~g~~~~l~~~~~~~~~-------------~--~-~~----~~~~~ 699 (718)
T 2e8y_A 644 RLYDLDEVDEWKDIIVIHHASPDS----VEWRLPNDIPYRLLCDPSGFQED-------------P--T-EI----KKTVA 699 (718)
T ss_dssp EECCCTTTCSSSEEEEEEECSSSE----EEEECSSCSCEEEEEETTEEEEE-------------E--E-EE----CSEEE
T ss_pred EEECCCCCCCCCEEEEEEECCCCC----EEEECCCCCCEEEEECCCCCCCC-------------C--C-CC----CCEEE
T ss_conf 994688888998499999589887----89988999948999548877776-------------5--6-77----97799
Q ss_pred ECCCEEEEEEECCC
Q ss_conf 76727999987133
Q 002609 884 LPSRTAQVYKLSRI 897 (900)
Q Consensus 884 LP~~sa~Vl~~~~~ 897 (900)
|||+|++||...+-
T Consensus 700 l~p~s~~vl~~~~~ 713 (718)
T 2e8y_A 700 VNGIGTVILYLASD 713 (718)
T ss_dssp EESSEEEEEEECC-
T ss_pred ECCCEEEEEEECCC
T ss_conf 89989999998875
No 8
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=1.00 E-value=1 Score=635.03 Aligned_cols=569 Identities=20% Similarity=0.275 Sum_probs=385.6
Q ss_pred CCCCCCCC-CCCCCCCEEEECCC--EEEEEECCCCCCEEEEEECCCCCCC-CEEEEEEEC-CCCEEEEEECCC-------
Q ss_conf 00012347-99999990894996--3999985779927999022899997-523310106-840899991899-------
Q 002609 270 AWKEQHKD-DLPSNLPYDVIDNG--KDYDVFNVASDPRWQEKFRSKEPPI-PYWLETRKG-RKAWLKKYTPGI------- 337 (900)
Q Consensus 270 ~~~~~~~~-~~g~~lp~~~~~~g--~~f~l~sp~a~~V~l~l~~~~~~~~-~~~~~m~~~-~~vW~~~~~~~~------- 337 (900)
+|++.|+. ++..+|+|++.++| ++|+||||+|++|+|++|+...... ...++|.+. +++| ++++++.
T Consensus 1 ~~~~~d~~~~y~~~lGa~~~~~g~gv~F~vwap~A~~V~l~l~~~~~~~~~~~~~~m~~~~~gvW-~~~v~~~~~~g~~~ 79 (714)
T 2ya0_A 1 SWRLKDETYSYDGKLGADLKEEGKQVDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKGERGTW-KQTLDSTNKLGITD 79 (714)
T ss_dssp CHHHHHHHHCCCSCCEEEEETTTTEEEEEEECTTCSEEEEEEECSSCTTSEEEEEECEECGGGEE-EEEECTTCSSSCSC
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCEEEECCCCCCCEE-EEEECCCCCCCCCC
T ss_conf 95313421247999887796899879999989989989999874798776515885704879889-99977756788544
Q ss_pred CCCCEEEEEEECCCCCEEECCCCCCCCCCC--------CCCCCCEEEECCCCCC--CCCCCCCCCCC-CCCCCEEEEEEC
Q ss_conf 999799999988999802037854212459--------9999862675279963--32433678999-999915999850
Q 002609 338 PHGSKYRVYFNTPDGPLERIPAWATYVQPD--------ADGKEAFAIHWEPSPE--FAYKWRNTRPK-VPKSLRIYECHV 406 (900)
Q Consensus 338 ~~g~~Y~~~i~~~~g~~~~~dpya~~~~~~--------~~~~~~~~~~~~p~~~--~~~~w~~~~p~-~p~~~iIYE~Hv 406 (900)
.+|..|+|+|...+.....+||||+++... +......++++++... ..++|....+. .+++++|||+||
T Consensus 80 ~~g~~Y~y~v~~~~~~~~~~DPya~~~~~~~~~~~~~~~~~~~~~~~vvd~~~~~~~~~~~~~~~~~~~~~~~viYE~hv 159 (714)
T 2ya0_A 80 FTGYYYQYQIERQGKTVLALDPYAKSLAAWNSDDSKIDDAHKVAKAAFVDPAKLGPQDLTYGKIHNFKTREDAVIYEAHV 159 (714)
T ss_dssp CTTCEEEEEEEETTEEEEECCTTCSEECCCBGGGTTSCGGGSSCCEECCCGGGSSCTTCCCCCCTTCSSGGGCCEEEECH
T ss_pred CCCCEEEEEEEECCCEEEECCCCEEEECCCCHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEE
T ss_conf 68838999997089438854876133236760002567656677679976511486543101367777855568999970
Q ss_pred CCCCCCC--------CCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCC------------------CCCCCCCCCCCCC
Q ss_conf 7568999--------8788453787545588981965389801233279------------------8998875478765
Q 002609 407 GISGSKP--------KISSFNEFTEKVLPHVKEAGYNVIQLFGVVEHKD------------------YFTVGYRVTNLYA 460 (900)
Q Consensus 407 g~~~~~~--------~~Gtf~g~~ek~L~yLk~LGvnaIqLmPI~e~~~------------------~~~wGY~~~nyfa 460 (900)
+.|+.++ ..|||++++++ |||||+||||+||||||++++. .++|||++.+||+
T Consensus 160 ~~f~~~~~~~~~~~~~~Gt~~gi~~~-L~yLk~LGvt~I~L~Pi~~~~~~~e~~~~~~~~~~~~~~~~~~wGY~~~~~~a 238 (714)
T 2ya0_A 160 RDFTSDPAIAKDLTKPFGTFEAFIEK-LDYLKDLGVTHIQLLPVLSYYFVNELKNHERLSDYASSNSNYNWGYDPQNYFS 238 (714)
T ss_dssp HHHHCCGGGTTTCSSCTTSHHHHHTT-HHHHHHHTCSEEEESCCBCBSSCBGGGTTSCCCSCCSSSCSCCCSCSBSCSSS
T ss_pred HHHCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 55236988753234677689999987-68999769987997884015556721011112223567676766777766756
Q ss_pred CCCCCCC--------HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCC-CCCCCCCCCC
Q ss_conf 5799999--------99999999999535847999402456656523445468899-985533798886-5787773466
Q 002609 461 VSSRYGT--------PDDFKRLVDEAHGLGLLVFLDIVHSYSAADQMVGLSQFDGS-NDCYFHTGKRGF-HKYWGTRMFK 530 (900)
Q Consensus 461 vd~~yGt--------~eelK~LVd~aH~~GI~VILDvV~NH~s~~~~~~l~~fdg~-~~~Yf~~~~~g~-~~~wg~~~ln 530 (900)
|+++||+ ++|||+||++||++||+||||||+||++.++ .|.+. +.+|...+..|. ...|+++++|
T Consensus 239 ~~~~yg~~~~~~~~~~~efk~lV~~~H~~Gi~VilDvV~NH~~~~~-----~~~~~~~~yy~~~~~~g~~~~~~~~~~l~ 313 (714)
T 2ya0_A 239 LTGMYSSDPKNPEKRIAEFKNLINEIHKRGMGAILDVVYNHTAKVD-----LFEDLEPNYYHFMDADGTPRTSFGGGRLG 313 (714)
T ss_dssp BCSTTSSCTTSTTHHHHHHHHHHHHHHHTTCEEEEEECTTBCSCHH-----HHHTTSTTTSBCBCTTCCBCEETTEEBBC
T ss_pred CCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCC-----CCCCCCCCEEEEECCCCCCCCCCCCCCCC
T ss_conf 6732236887765569999999999998799999996257445764-----32246887147858999870466888756
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 89999999999999999995380088863742000026776456787355630026512999999999999830999899
Q 002609 531 YDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIIT 610 (900)
Q Consensus 531 y~~~eVr~flld~l~~Wi~eygVDGFRfD~v~~m~y~~~g~~~~~g~~~~~~~~~~d~ea~~~l~~~n~~l~~~~P~~i~ 610 (900)
+++++|+++|+++++||++||||||||||+++++ ...+|..++..+++.+|++++
T Consensus 314 ~~~~~v~~~i~d~l~~W~~e~~vDGfR~D~~~~~-------------------------~~~~~~~~~~~~~~~~p~~~l 368 (714)
T 2ya0_A 314 TTHHMTKRLLIDSIKYLVDTYKVDGFRFDMMGDH-------------------------DAASIEEAYKAARALNPNLIM 368 (714)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGS-------------------------BHHHHHHHHHHHHHHCTTCEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCC-------------------------CHHHHHHHHHHHHHHCCCEEE
T ss_conf 5899999999999999998619319999687887-------------------------889999999999986998499
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCC------CCHHHHHHHHHHCCCCC----------CCCCHHHHHHHHHCC-----C
Q ss_conf 99127999985455667998753114------50257999998704999----------875277899976218-----8
Q 002609 611 IAEDATYYPGLCEPTTQGGLGFDYFL------NLSASEMWLSFLENTPD----------HEWSMSKIVSTLVGN-----G 669 (900)
Q Consensus 611 IaE~~s~~p~l~~~~~~gg~GFD~~~------n~~~~d~~~~~lk~~~~----------~~~~~~~i~~~l~~n-----~ 669 (900)
|||.|....+...... ..++..+ ...+.+.+++.+++... ....+..+...+.+. .
T Consensus 369 igE~w~~~~g~~~~~~---~~~~~~~~~~~~~~~~f~d~~r~~~~~~~~~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~ 445 (714)
T 2ya0_A 369 LGEGWRTYAGDENMPT---KAADQDWMKHTDTVAVFSDDIRNNLKSGYPNEGQPAFITGGKRDVNTIFKNLIAQPTNFEA 445 (714)
T ss_dssp EECCCSCCCCSTTCCC---CBSSGGGGGGCSSSEEECHHHHHHHHCCSSSTTCCCTTTTCCEEHHHHHHHHTTCCTTSCC
T ss_pred EECCCCCCCCCCCCCC---CCCCHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCCCC
T ss_conf 9325434467542224---5540548865997553065899998465775454112117765299999877448655677
Q ss_pred CCCCCEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC
Q ss_conf 77663475234633565689741345204566789992355543039999999999990799306413312469999878
Q 002609 670 QYSDKMIMYAENHNQSISGGRSFAEILFGEISEHSPDTNNLLLRGCSLHKMIRLITFTIGGHAYLNFMGNEFGHPKRVEF 749 (900)
Q Consensus 670 ~~~~~~v~Y~EnHDqa~~g~~tl~~~L~~~~~~~~~~~~~~i~r~~~l~kl~~ll~l~l~G~~Plif~G~EfG~~~~~d~ 749 (900)
..+..+|+|++|||+.+ +.+++.... .......+......++.|++.+++|+++| +||||||+|+|+++.+..
T Consensus 446 ~~p~~~vnfv~nHD~~~-----l~d~~~~~~-~~~~~~~~~~~~~~~~~~la~~lll~~~G-~P~i~~GdE~g~~~~~~d 518 (714)
T 2ya0_A 446 DSPGDVIQYIAAHDNLT-----LFDIIAQSI-KKDPSKAENYAEIHRRLRLGNLMVLTAQG-TPFIHSGQEYGRTKQFRN 518 (714)
T ss_dssp SSGGGEEECSCCSSSSC-----HHHHHHHHH-TCCTTSHHHHHHHHHHHHHHHHHHHHSSS-EEEEETTTTTTCCCBCCC
T ss_pred CCHHHHHHHHHHCCCCC-----HHHHHHHHC-CCCCCCCCCHHHHHHHHHHHHHHHHHCCC-CCEEEECHHHCCCCCCCC
T ss_conf 89889754987479861-----444444431-46854310139999999999999997799-847980444324578887
Q ss_pred CC--------------------------------CCCCCCCCCCCCCCCCCCC----CCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 99--------------------------------9998765633455310001----25731999999999999847322
Q 002609 750 PM--------------------------------PSNNFSFSLANRHWDLLAN----RLHSNLYSFDQELMKLDENAKVL 793 (900)
Q Consensus 750 p~--------------------------------~~n~~s~~~~~~~W~l~~~----~~~~~L~~f~k~Li~LRk~~~aL 793 (900)
|. .+.+.+...+.++|+.... +.++.+++|+|+||+||+++|+|
T Consensus 519 ~~~~~~~~~gr~~e~~~~~~~~~g~~f~~p~~~~d~~~~~~~~~~ldW~~~~~~~~~~~~~~l~~~~~~Li~lRk~~p~l 598 (714)
T 2ya0_A 519 PAYRTPVAEDKVPNKSHLLRDKDGNPFDYPYFIHDSYDSSDAVNKFDWTKATDGKAYPENVKSRDYMKGLIALRQSTDAF 598 (714)
T ss_dssp GGGSSCCCGGGCCTTEEEEECTTCCEEEEEEEESCCTTCCHHHHCCCHHHHHCTTTCHHHHHHHHHHHHHHHHHHTCGGG
T ss_pred CHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHH
T ss_conf 01320122234421112222113554334332346667887520103774223343411489999999999998519021
Q ss_pred CCCCCE-----EEEEC--------CCCEEEEEECC-----CEEEEEECCCCCCCCCEEEECCCC----CEEEEEECCCCC
Q ss_conf 269942-----79624--------99829999838-----599999699999654149720589----708999528976
Q 002609 794 LRGSPS-----VHHVN--------DAKMVICYMRG-----PLVFIFNFHPTDSYEDYSVGVEEA----GEYQIILNTDES 851 (900)
Q Consensus 794 ~~g~~~-----~~~~~--------~~~~Viaf~R~-----~llvV~Nf~~~~s~~~y~i~vp~~----G~y~~vl~td~~ 851 (900)
+.+... +.+.. ..+.+++|.|. .++|++|++.++ . .+.+|.. +.|.+++++...
T Consensus 599 ~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~V~~N~~~~~--~--~~~lp~~~~~~~~~~~~~d~~~~ 674 (714)
T 2ya0_A 599 RLKSLQDIKDRVHLITVPGQNGVEKEDVVIGYQITAPNGDIYAVFVNADEKA--R--EFNLGTAFAHLRNAEVLADENQA 674 (714)
T ss_dssp GCSSHHHHHHHEEESSCTTSTTCCSEESEEEEEEECTTSCEEEEEEECSSSC--E--EEECTTTTGGGGGCEEEECSSCB
T ss_pred CCCCHHHHCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCC--E--EEECCCCCCCCCCEEEEEECCCC
T ss_conf 3775244167569978899987777785899998379999899998998786--7--99899976678666999848988
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEEEEECCC
Q ss_conf 4477663235431000000101596503999976727999987133
Q 002609 852 KFGGQGLIKEHQYLQRTISKRVDGLRNCIEVPLPSRTAQVYKLSRI 897 (900)
Q Consensus 852 ~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~i~LP~~sa~Vl~~~~~ 897 (900)
+...+.... .... ....++|||+|++||+.++.
T Consensus 675 ---~~~~~~~~~------~~~~----~~~~~~l~~~s~~vl~~~~~ 707 (714)
T 2ya0_A 675 ---GPVGIANPK------GLEW----TEKGLKLNALTATVLRVSQN 707 (714)
T ss_dssp ---CSSCCSSCS------SEEE----CSSEEEECTTEEEEEEECGG
T ss_pred ---CCCCCCCCC------CCCC----CCCEEEECCCEEEEEEECCC
T ss_conf ---865333455------5334----69879984789999998787
No 9
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=1.00 E-value=1 Score=632.08 Aligned_cols=539 Identities=18% Similarity=0.276 Sum_probs=384.1
Q ss_pred CCCCEEEECCCEEEEEECCCCCCEEEEEECCCCCCCCEEEEEEE-CCCCEEEEEECCCCCCCEEEEEEECC----CCC--
Q ss_conf 99990894996399998577992799902289999752331010-68408999918999997999999889----998--
Q 002609 281 SNLPYDVIDNGKDYDVFNVASDPRWQEKFRSKEPPIPYWLETRK-GRKAWLKKYTPGIPHGSKYRVYFNTP----DGP-- 353 (900)
Q Consensus 281 ~~lp~~~~~~g~~f~l~sp~a~~V~l~l~~~~~~~~~~~~~m~~-~~~vW~~~~~~~~~~g~~Y~~~i~~~----~g~-- 353 (900)
.+|+|++.++|++|+||||+|++|+|++|+..... ..++|.+ .+++| +++++++.+|+.|+|+|+++ +|.
T Consensus 10 ~~lGa~~~~~g~~F~vwap~A~~V~l~~f~~~~~~--~~~~m~~~~~g~w-~~~v~~~~~g~~Y~y~v~~~~~p~~g~~~ 86 (657)
T 2wsk_A 10 APLGAHYDGQGVNFTLFSAHAERVELCVFDANGQE--HRYDLPGHSGDIW-HGYLPDARPGLRYGYRVHGPWQPAEGHRF 86 (657)
T ss_dssp CSSSEEECSSEEEEEEECSSCSEEEEEEECTTCCE--EEEECCEEETTEE-EEEEETCCTTCEEEEEEECCCCGGGTCCC
T ss_pred CCCCCEEECCEEEEEEECCCCCEEEEEEECCCCCE--EEEECCCCCCCEE-EEEECCCCCCCEEEEEEEEEECCCCCCCC
T ss_conf 89872796993899999999999899998799977--8896867979989-99979899999899999244067667422
Q ss_pred ---EEECCCCCCCCCCCCC---------------C---CCCEEEECCCCCCCCCCCCCCCC-CCC-CCCEEEEEECCCCC
Q ss_conf ---0203785421245999---------------9---98626752799633243367899-999-99159998507568
Q 002609 354 ---LERIPAWATYVQPDAD---------------G---KEAFAIHWEPSPEFAYKWRNTRP-KVP-KSLRIYECHVGISG 410 (900)
Q Consensus 354 ---~~~~dpya~~~~~~~~---------------~---~~~~~~~~~p~~~~~~~w~~~~p-~~p-~~~iIYE~Hvg~~~ 410 (900)
...+||||+++..... . ....+++++| .|+|+++++ ..+ ++++|||+||+.|+
T Consensus 87 ~~~~~~~DPya~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~v~d~----~~~W~~~~~~~~~~~~~vIYei~v~~F~ 162 (657)
T 2wsk_A 87 NPAKLLIDPCARQIDGEFKDNPLLHAGHNEPDYRDNAAIAPKCVVVVD----HYDWEDDAPPRTPWGSTIIYEAHVKGLT 162 (657)
T ss_dssp CTTSCBCCTTCSCEESCCCCCGGGBCCSSSCCCCCCGGGSCEEECCCC----CCCCTTCCCCCCCGGGCCEEEECHHHHH
T ss_pred CCCEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC----CCCCCCCCCCCCCCHHCEEEEEECCEEE
T ss_conf 662298286842035776566222454223455665334654289678----7787777788898035579999742331
Q ss_pred C-CC-----CCCCHHHHHHH-HHHHHHHCCCCEEEEEEEEECCCC---------CCCCCCCCCCCCCCCCCC-----CHH
Q ss_conf 9-99-----87884537875-455889819653898012332798---------998875478765579999-----999
Q 002609 411 S-KP-----KISSFNEFTEK-VLPHVKEAGYNVIQLFGVVEHKDY---------FTVGYRVTNLYAVSSRYG-----TPD 469 (900)
Q Consensus 411 ~-~~-----~~Gtf~g~~ek-~L~yLk~LGvnaIqLmPI~e~~~~---------~~wGY~~~nyfavd~~yG-----t~e 469 (900)
. ++ ..|||+|++++ +|||||+||||+||||||++++.. ++|||++++||+|+++|| +.+
T Consensus 163 ~~~~~~~~~~~G~~~gi~~~~~l~yL~~LGvt~i~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~~~G~~p~~~~~ 242 (657)
T 2wsk_A 163 YLHPEIPVEIRGTYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHPAYACSPETALD 242 (657)
T ss_dssp TTCTTSCGGGTTSHHHHTSHHHHHHHHHHTCCEEEESCCEEECCCHHHHTTTCCCSSCCCEEEEEEECGGGCSSGGGHHH
T ss_pred CCCCCCCCCCCCCHHHHHCCCCHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHH
T ss_conf 24899874678699997463001899973988799878540676544333466565586744487888777689876799
Q ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCC-CCCC-CCCCCCCCCCCC-CCCCCCC-CCCCCCCHHHHHHHHHHHH
Q ss_conf 9999999995358479994024566565234454-6889-998553379888-6578777-3466899999999999999
Q 002609 470 DFKRLVDEAHGLGLLVFLDIVHSYSAADQMVGLS-QFDG-SNDCYFHTGKRG-FHKYWGT-RMFKYDDLDVLHFLLSNLN 545 (900)
Q Consensus 470 elK~LVd~aH~~GI~VILDvV~NH~s~~~~~~l~-~fdg-~~~~Yf~~~~~g-~~~~wg~-~~lny~~~eVr~flld~l~ 545 (900)
|||+||++||++||+||||||+||++.++.++.. .|.+ .+..||+.++.+ +++.|++ ++||+++|+|+++|+++++
T Consensus 243 d~~~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~ln~~~p~v~~~i~d~~~ 322 (657)
T 2wsk_A 243 EFRDAIKALHKAGIEVILDIVLNHSAELDLDGPLFSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLR 322 (657)
T ss_dssp HHHHHHHHHHHTTCEEEEEECCSCCTTCSTTSBCCSHHHHHHHHHBCBCTTSSBCCSSSSSCCBCTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99999999998799899998515523566667522126899865257789998237888677536799999999999999
Q ss_pred HHHHHCCCCEEEECCCCCCHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
Q ss_conf 99995380088863742000026776456787355630026512999999999999830999899991279999854556
Q 002609 546 WWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPT 625 (900)
Q Consensus 546 ~Wi~eygVDGFRfD~v~~m~y~~~g~~~~~g~~~~~~~~~~d~ea~~~l~~~n~~l~~~~P~~i~IaE~~s~~p~l~~~~ 625 (900)
||++||||||||||++++|... .++. +...+++.++. ....|++++|||.|...+...
T Consensus 323 ~W~~e~gvDGfR~D~~~~l~~~-~~~~----------------~~~~~~~~i~~--~~~~~~~~liaE~w~~~~~~~--- 380 (657)
T 2wsk_A 323 YWVETCHVDGFRFDLAAVMGRT-PEFR----------------QDAPLFTAIQN--CPVLSQVKLIAEPWDIAPGGY--- 380 (657)
T ss_dssp HHHHTTCCCEEEETTTHHHHBS-SSBC----------------TTCHHHHHHHH--CTTGGGSEEEECCBCSSTTCB---
T ss_pred HHHHHHCCCEEEEECCCCCCCC-CCCC----------------HHHHHHHHHHH--CCCCCCCEEEECCCCCCCCCC---
T ss_conf 9999709848999253424654-4531----------------14899999984--844689489973234788732---
Q ss_pred CCCCCCCC---CCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC-------CCCCCCEEECCCCCCCCCCCCCCHHHH
Q ss_conf 67998753---11450257999998704999875277899976218-------877663475234633565689741345
Q 002609 626 TQGGLGFD---YFLNLSASEMWLSFLENTPDHEWSMSKIVSTLVGN-------GQYSDKMIMYAENHNQSISGGRSFAEI 695 (900)
Q Consensus 626 ~~gg~GFD---~~~n~~~~d~~~~~lk~~~~~~~~~~~i~~~l~~n-------~~~~~~~v~Y~EnHDqa~~g~~tl~~~ 695 (900)
..+ +|+ ..||..+.+.+..++++.. ..+..+...+... .+.+..+++|++|||+.+ +.+.
T Consensus 381 ~~~--~f~~~~~~~n~~~~~~~~~~~~g~~---~~~~~~~~~l~~~~~~y~~~~~~~~~~~nf~~~HD~~~-----l~dl 450 (657)
T 2wsk_A 381 QVG--NFPPLFAEWNDHFRDAARRFWLHYD---LPLGAFAGRFAASSDVFKRNGRLPSAAINLVTAHDGFT-----LRDC 450 (657)
T ss_dssp CTT--CSCTTEEEEEHHHHHHHHHHHHTSC---SCHHHHHHHHBTTHHHHSSTTCCGGGEEECSCCSSSCC-----HHHH
T ss_pred CCC--CCCCCHHHHHHHHHHHHHHHHCCCC---CHHHHHHHHHHCCHHHHCCCCCCCCCEEEHHHCCCCCC-----HHHH
T ss_conf 036--7773189871899999999964698---60999999875655453357778230222534289876-----8999
Q ss_pred HC---------CCC------CCCCCCCH-------H-HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC
Q ss_conf 20---------456------67899923-------5-5543039999999999990799306413312469999878999
Q 002609 696 LF---------GEI------SEHSPDTN-------N-LLLRGCSLHKMIRLITFTIGGHAYLNFMGNEFGHPKRVEFPMP 752 (900)
Q Consensus 696 L~---------~~~------~~~~~~~~-------~-~i~r~~~l~kl~~ll~l~l~G~~Plif~G~EfG~~~~~d~p~~ 752 (900)
+. +.. .....++. . ......+..|++++++|+++| +||||||+|+|+++.... .
T Consensus 451 ~~~~~~~~~~~g~~~~~g~~~~~s~n~~~~g~~~~~~~~~~~~~~~r~~~a~ll~~~G-~P~iy~GdE~G~~~~g~~--~ 527 (657)
T 2wsk_A 451 VCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLLSQG-TPMLLAGDEHGHSQHGNN--N 527 (657)
T ss_dssp TTCSSCCCGGGSSTTCSSCSCCCCCCTTSSSSCCCHHHHHHHHHHHHHHHHHHHHSBS-EEEEETTTTTTCCCTTCS--C
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-CCEEEECHHHCCCCCCCC--C
T ss_conf 9877322344254456775444320146546777666788999999999999987154-877872112224568988--8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCE------EEEECCC------------CEEEEEEC
Q ss_conf 99876563345531000125731999999999999847322269942------7962499------------82999983
Q 002609 753 SNNFSFSLANRHWDLLANRLHSNLYSFDQELMKLDENAKVLLRGSPS------VHHVNDA------------KMVICYMR 814 (900)
Q Consensus 753 ~n~~s~~~~~~~W~l~~~~~~~~L~~f~k~Li~LRk~~~aL~~g~~~------~~~~~~~------------~~Viaf~R 814 (900)
.++....+++++|+.. ..++++|+|+||+||+++|+|+.+... +.+.+.. ..+++|.|
T Consensus 528 ~y~~d~~~~~~~W~~~----~~~l~~~~~~Li~lRk~~pal~~g~~~~~~~~~v~~~~~~g~~~~~~~w~~~~~~la~~r 603 (657)
T 2wsk_A 528 AYCQDNQLTWLDWSQA----SSGLTAFTAALIHLRKRIPALVENRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQILL 603 (657)
T ss_dssp CTTCCSTTTSCCGGGC----CHHHHHHHHHHHHHHTTCHHHHSCCCCCTTSSSEEEECTTSSBCCHHHHHHSCSEEEEEE
T ss_pred CCCCCCCCCCCCCCCC----CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 4236886674585512----089999999999998649000367533367775699847985244334567775699998
Q ss_pred -CCEEEEEECCCCCCCCCEEEECCCCCEEEE--EECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEE
Q ss_conf -859999969999965414972058970899--95289764477663235431000000101596503999976727999
Q 002609 815 -GPLVFIFNFHPTDSYEDYSVGVEEAGEYQI--ILNTDESKFGGQGLIKEHQYLQRTISKRVDGLRNCIEVPLPSRTAQV 891 (900)
Q Consensus 815 -~~llvV~Nf~~~~s~~~y~i~vp~~G~y~~--vl~td~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~i~LP~~sa~V 891 (900)
+.++|++|++.++ ..+.+| .|.|+. +++++... + . ...++|||+|++|
T Consensus 604 ~~~~lv~~N~s~~~----~~~~lp-~g~~~~~~l~~~~~~~------~--------------~----~~~~~l~~~s~~v 654 (657)
T 2wsk_A 604 SDRFLIAINATLEV----TEIVLP-AGEWHAIPPFAGEDNP------V--------------I----TAVWQGPAHGLCV 654 (657)
T ss_dssp TTTEEEEEECSSSC----EEEECC-SSCCEECTTSSCTTCC------C--------------C----CSEEEECTTEEEE
T ss_pred CCCEEEEECCCCCC----EEEECC-CCCEEEEEEECCCCCC------C--------------C----CCEEEECCCEEEE
T ss_conf 69799999589986----689748-9854998885389976------6--------------6----8638988878999
Q ss_pred EEE
Q ss_conf 987
Q 002609 892 YKL 894 (900)
Q Consensus 892 l~~ 894 (900)
|++
T Consensus 655 l~~ 657 (657)
T 2wsk_A 655 FQR 657 (657)
T ss_dssp EEC
T ss_pred EEC
T ss_conf 959
No 10
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=1.00 E-value=1 Score=628.76 Aligned_cols=573 Identities=15% Similarity=0.169 Sum_probs=388.4
Q ss_pred CCCCEEEECCC--EEEEEECCCCCCEEEEEECCCC-CCCCEEEEEEE-CCCCEEEEEECCCC------CCC-EEEEEEEC
Q ss_conf 99990894996--3999985779927999022899-99752331010-68408999918999------997-99999988
Q 002609 281 SNLPYDVIDNG--KDYDVFNVASDPRWQEKFRSKE-PPIPYWLETRK-GRKAWLKKYTPGIP------HGS-KYRVYFNT 349 (900)
Q Consensus 281 ~~lp~~~~~~g--~~f~l~sp~a~~V~l~l~~~~~-~~~~~~~~m~~-~~~vW~~~~~~~~~------~g~-~Y~~~i~~ 349 (900)
.+|+|++.++| ++|+||||+|++|+|++|+... ......++|.+ ++++| +++++++. +|. .|+|+|.+
T Consensus 5 ~~lGa~~~~~g~~~~F~vwap~A~~V~l~l~~~~~~~~~~~~~~m~~~~~gvW-~~~v~~~~~~~~~~~g~y~Y~y~v~g 83 (750)
T 1bf2_A 5 MSLGASYDAQQANITFRVYSSQATRIVLYLYSAGYGVQESATYTLSPAGSGVW-AVTVPVSSIKAAGITGAVYYGYRAWG 83 (750)
T ss_dssp TCCEEEECTTSSEEEEEEECSSCSEEEEEEESSSSSCCCSEEEECEECSTTEE-EEEEEHHHHHHTTCCSCCEEEEEEEB
T ss_pred CCCCCEEECCCCEEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCCCEE-EEEECCCCCCCCCCCCCEEEEEEEEE
T ss_conf 68972795898879999999999989999872688886515884534889989-99977744445568997799999976
Q ss_pred C----------------------CCC-----EEECCCCCCCCCCCCCCC----------------------CCEEEECCC
Q ss_conf 9----------------------998-----020378542124599999----------------------862675279
Q 002609 350 P----------------------DGP-----LERIPAWATYVQPDADGK----------------------EAFAIHWEP 380 (900)
Q Consensus 350 ~----------------------~g~-----~~~~dpya~~~~~~~~~~----------------------~~~~~~~~p 380 (900)
+ .|. ...+||||+.+....... ...+++++|
T Consensus 84 ~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~DPya~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~s~v~~~ 163 (750)
T 1bf2_A 84 PNWPYASNWGKGSQAGFVSDVDANGDRFNPNKLLLDPYAQEVSQDPLNPSNQNGNVFASGASYRTTDSGIYAPKGVVLVP 163 (750)
T ss_dssp TTBCCCTTCCTTCCTTCCCSSCTTCCCCCTTSCBCCTTCSCBSCCSSCSSCCCGGGGBCSTTTTTCCCTTTSCCEECCCC
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
T ss_conf 62565543344665431112234574237775456867604435777753444311134433345665223665499689
Q ss_pred CCCCCCCCCCCCCCCC-CCCEEEEEECCCCCC-CC-----CCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCC-----
Q ss_conf 9633243367899999-991599985075689-99-----87884537875455889819653898012332798-----
Q 002609 381 SPEFAYKWRNTRPKVP-KSLRIYECHVGISGS-KP-----KISSFNEFTEKVLPHVKEAGYNVIQLFGVVEHKDY----- 448 (900)
Q Consensus 381 ~~~~~~~w~~~~p~~p-~~~iIYE~Hvg~~~~-~~-----~~Gtf~g~~ek~L~yLk~LGvnaIqLmPI~e~~~~----- 448 (900)
.|+|++.+|..+ ++++|||+||+.|+. ++ ..|||++++++ |+|||+||||+||||||++++..
T Consensus 164 ----~~~W~d~~~~~~~~~~vIYe~hv~~f~~~~~~~~~~~~Gt~~gl~~~-l~yLk~LGvt~V~L~Pi~~~~~~~~~~~ 238 (750)
T 1bf2_A 164 ----STQSTGTKPTRAQKDDVIYEVHVRGFTEQDTSIPAQYRGTYYGAGLK-ASYLASLGVTAVEFLPVQETQNDANDVV 238 (750)
T ss_dssp ----CCCCCCCCCCCCGGGCCEEEECHHHHHTTCTTSCGGGTTSHHHHHHT-HHHHHHHTCCEEEESCCBCBSCTTTTSS
T ss_pred ----CCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCHHHHHHH-HHHHHHCCCCEEEECCCCCCCCCCCCCC
T ss_conf ----88877678889965467999984185276999875678599999987-8999876988799888645765443323
Q ss_pred -------CCCCCCCCCCCCCCCCCCC-------HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC--------CCCC
Q ss_conf -------9988754787655799999-------99999999999535847999402456656523445--------4688
Q 002609 449 -------FTVGYRVTNLYAVSSRYGT-------PDDFKRLVDEAHGLGLLVFLDIVHSYSAADQMVGL--------SQFD 506 (900)
Q Consensus 449 -------~~wGY~~~nyfavd~~yGt-------~eelK~LVd~aH~~GI~VILDvV~NH~s~~~~~~l--------~~fd 506 (900)
++|||++.+||+|+++||| ++|||+||++||++||+||||||+||++.++.++. ..|.
T Consensus 239 ~~~~g~~~~wGY~~~dy~~~~~~yGt~~~~~~~~~efk~lV~~~H~~Gi~VilDvV~NH~~~~~~~~~~d~~~~p~~~~~ 318 (750)
T 1bf2_A 239 PNSDANQNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGIKVYMDVVYNHTAEGGTWTSSDPTTATIYSWR 318 (750)
T ss_dssp TTCCTTCCCSCCCBSCSSCBCGGGCSCCSTTHHHHHHHHHHHHHHHTTCEEEEEECCSSCTTCSBSSSSCSSCBBCSSHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 23446666557573405663701168888751799999999999988998999985166557653334555568874434
Q ss_pred C-CCCCCCCCCC-CC-CCCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHCCCCCCCCCCCHHHHH
Q ss_conf 9-9985533798-88-6578777-34668999999999999999999538008886374200002677645678735563
Q 002609 507 G-SNDCYFHTGK-RG-FHKYWGT-RMFKYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYC 582 (900)
Q Consensus 507 g-~~~~Yf~~~~-~g-~~~~wg~-~~lny~~~eVr~flld~l~~Wi~eygVDGFRfD~v~~m~y~~~g~~~~~g~~~~~~ 582 (900)
+ .+..||+..+ .+ +.+.|++ ++||+++|+|+++|+++++||++||||||||||++++|... .+..+.+... .
T Consensus 319 ~~d~~~~y~~~~~~~~~~~~~g~~~~ln~~~p~V~~~i~d~l~~W~~e~gvDGfR~D~a~~l~~~--f~~~~~~~~~--~ 394 (750)
T 1bf2_A 319 GLDNATYYELTSGNQYFYDNTGIGANFNTYNTVAQNLIVDSLAYWANTMGVDGFRFDLASVLGNS--CLNGAYTASA--P 394 (750)
T ss_dssp HHHHHHHBCBCTTSSSBCCSSSSSCCBCTTSHHHHHHHHHHHHHHHHTSCCCEEEETTGGGGGBC--CSSSSCCTTS--T
T ss_pred CCCCCCCEEECCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECHHHCCCH--HHHCCCCCCC--C
T ss_conf 67897634787999724157786772055998999999999999999839768999664653700--1101122234--4
Q ss_pred HCCC---CHH----HHHHHHHHHHH-HHHCC--CCEEEEEECCCCCCCCCCCCCCCCCCCC---CCCCCHHHHHHHHHHC
Q ss_conf 0026---512----99999999999-98309--9989999127999985455667998753---1145025799999870
Q 002609 583 NQYV---DKD----ALLYLILANEI-LHALH--PNIITIAEDATYYPGLCEPTTQGGLGFD---YFLNLSASEMWLSFLE 649 (900)
Q Consensus 583 ~~~~---d~e----a~~~l~~~n~~-l~~~~--P~~i~IaE~~s~~p~l~~~~~~gg~GFD---~~~n~~~~d~~~~~lk 649 (900)
++.. +.. ...++..++.. +++.. |++++|||.|...+... . -.+|+ ..||..+.+.+..+++
T Consensus 395 ~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~~~liaE~w~~~~~~~---~--~~~F~~~~~~wn~~~rd~l~~f~~ 469 (750)
T 1bf2_A 395 NCPNGGYNFDAADSNVAINRILREFTVRPAAGGSGLDLFAEPWAIGGNSY---Q--LGGFPQGWSEWNGLFRDSLRQAQN 469 (750)
T ss_dssp TCTTCSCCBCTTCTTSHHHHHHHHSCBCCTTCCSSBEEEECCCCSSTTCC---C--TTCSCTTCEEECHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCEEEECCCCCCCCCH---H--HCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 44455433000230489999999684012215788169935455786601---3--316780078874899999999964
Q ss_pred CCCCCCCCHHHHHHHHHCC-------CCCCCCEEECCCCCCCCCCCCCCHHHHHC------------CC-----CCCCCC
Q ss_conf 4999875277899976218-------87766347523463356568974134520------------45-----667899
Q 002609 650 NTPDHEWSMSKIVSTLVGN-------GQYSDKMIMYAENHNQSISGGRSFAEILF------------GE-----ISEHSP 705 (900)
Q Consensus 650 ~~~~~~~~~~~i~~~l~~n-------~~~~~~~v~Y~EnHDqa~~g~~tl~~~L~------------~~-----~~~~~~ 705 (900)
+.......+..+...+.+. .+.+..+++|++|||+.+ +.+.+. +. ..+...
T Consensus 470 g~~~~~~~~~~l~~~l~~~~~~y~~~~~~p~~~vnfv~nHD~~~-----l~dl~s~~~~~n~~~~~~G~n~dG~~~n~s~ 544 (750)
T 1bf2_A 470 ELGSMTIYVTQDANDFSGSSNLFQSSGRSPWNSINFIDVHDGMT-----LKDVYSCNGANNSQAWPYGPSDGGTSTNYSW 544 (750)
T ss_dssp CBTTBCCCHHHHHHHHTTCHHHHGGGTCCGGGEEECSCCSSSCC-----HHHHTTCSSCCCCCCTTSCCCCCCCSCCCCC
T ss_pred CCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCEEEEEEECCCCCC-----HHHHHHHHCCCCHHHHHCCCCCCCCCCCCCC
T ss_conf 77778878999998754665453357888210788744689986-----8988765302111332126777876443331
Q ss_pred CCHH-----HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCHH
Q ss_conf 9235-----5543039999999999990799306413312469999878999998765----633455310001257319
Q 002609 706 DTNN-----LLLRGCSLHKMIRLITFTIGGHAYLNFMGNEFGHPKRVEFPMPSNNFSF----SLANRHWDLLANRLHSNL 776 (900)
Q Consensus 706 ~~~~-----~i~r~~~l~kl~~ll~l~l~G~~Plif~G~EfG~~~~~d~p~~~n~~s~----~~~~~~W~l~~~~~~~~L 776 (900)
++.. ......++.+++.+++|+++| +||||||+|+|+++.+ |+++| .+++++|++.. .++.+
T Consensus 545 n~g~~g~t~~~~~r~~~~r~a~a~ll~~~G-~P~i~~GdE~g~t~~G------~~n~y~~~~~i~~~dW~~~~--~~~~l 615 (750)
T 1bf2_A 545 DQGMSAGTGAAVDQRRAARTGMAFEMLSAG-TPLMQGGDEYLRTLQC------NNNAYNLDSSANWLTYSWTT--DQSNF 615 (750)
T ss_dssp CTTTTTTSCCHHHHHHHHHHHHHHHHHSSS-EEEEETTGGGTCCCTT------CSCCTTCCSTTTSCCCCCCH--HHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHCCC-CCEEEECHHHCCCCCC------CCCCCCCCCCCCCCCCCCCC--CCHHH
T ss_conf 344557740567899999999999997489-6013542623657788------88865588866535778664--43599
Q ss_pred HHHHHHHHHHHHHCCCCCCCCC----EEEEE-------------CCCCEEEEEECC--------CEEEEEECCCCCCCCC
Q ss_conf 9999999999984732226994----27962-------------499829999838--------5999996999996541
Q 002609 777 YSFDQELMKLDENAKVLLRGSP----SVHHV-------------NDAKMVICYMRG--------PLVFIFNFHPTDSYED 831 (900)
Q Consensus 777 ~~f~k~Li~LRk~~~aL~~g~~----~~~~~-------------~~~~~Viaf~R~--------~llvV~Nf~~~~s~~~ 831 (900)
++|+++||+||+++|+|+.+.. .+.+. +....+|+|.|. .++||+|++++. ..
T Consensus 616 ~~~~~~Li~lRk~~pal~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~la~~r~~~~~~~~~~~~vv~N~~~~~--~~ 693 (750)
T 1bf2_A 616 YTFAQRLIAFRKAHPALRPSSWYSGSQLTWYQPSGAVADSNYWNNTSNYAIAYAINGPSLGDSNSIYVAYNGWSSS--VT 693 (750)
T ss_dssp HHHHHHHHHHHHHCGGGSCSSCCCTTTEEEECTTSSBCCHHHHTCTTCCEEEEEECGGGGTCSSCEEEEEECSSSC--EE
T ss_pred HHHHHHHHHHHHHCHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCC--EE
T ss_conf 9999999999864911067753566757996588874674444589998899999798788887799998799987--79
Q ss_pred EEEECCCCC-EEEEEECCCC---CCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEEEEEC
Q ss_conf 497205897-0899952897---644776632354310000001015965039999767279999871
Q 002609 832 YSVGVEEAG-EYQIILNTDE---SKFGGQGLIKEHQYLQRTISKRVDGLRNCIEVPLPSRTAQVYKLS 895 (900)
Q Consensus 832 y~i~vp~~G-~y~~vl~td~---~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~i~LP~~sa~Vl~~~ 895 (900)
+.++.+..| .|+++++|+. .. + ....... ... ..+. .+.+.|||+|++||..+
T Consensus 694 ~~lp~~~~g~~w~~~~~t~~~~~~~--~-~~~~~~~-----~~~-~~~~--~~~~~v~~~s~~v~~~~ 750 (750)
T 1bf2_A 694 FTLPAPPSGTQWYRVTDTCDWNDGA--S-TFVAPGS-----ETL-IGGA--GTTYGQCGQSLLLLISK 750 (750)
T ss_dssp EECCCCSSSSCEEEEEECSGGGCST--T-SBCCTTC-----CEE-EEST--TCEEEECSSEEEEEEEC
T ss_pred EECCCCCCCCCEEEEECCCCCCCCC--C-CCCCCCC-----CCC-CCCC--CCEEEECCCEEEEEEEC
T ss_conf 9788988998089995488766787--6-4445454-----311-3797--42588789889999979
Done!