Query 002611
Match_columns 900
No_of_seqs 350 out of 2064
Neff 6.5
Searched_HMMs 29240
Date Tue Mar 26 16:50:06 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/002611.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1328-1332//hhsearch_pdb/002611hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ht6_A AMY1, alpha-amylase iso 1.0 1 1 576.6 36.4 391 509-900 2-405 (405)
2 4aef_A Neopullulanase (alpha-a 1.0 1 1 527.8 14.9 371 469-893 206-631 (645)
3 4aee_A Alpha amylase, catalyti 1.0 1 1 523.3 23.8 388 468-899 224-691 (696)
4 1wzl_A Alpha-amylase II; pullu 1.0 1 1 514.7 24.8 366 467-876 128-537 (585)
5 1ea9_C Cyclomaltodextrinase; h 1.0 1 1 514.3 28.9 367 468-877 129-538 (583)
6 1j0h_A Neopullulanase; beta-al 1.0 1 1 512.3 26.1 387 466-899 131-585 (588)
7 1gcy_A Glucan 1,4-alpha-maltot 1.0 1 1 512.3 32.1 374 507-899 15-418 (527)
8 3edf_A FSPCMD, cyclomaltodextr 1.0 1 1 510.0 29.5 397 469-899 106-595 (601)
9 2wc7_A Alpha amylase, catalyti 1.0 1 1 508.0 23.8 373 466-876 8-436 (488)
10 2z1k_A (NEO)pullulanase; hydro 1.0 1 1 501.8 25.0 370 468-876 5-425 (475)
No 1
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=1.00 E-value=1 Score=576.59 Aligned_cols=391 Identities=47% Similarity=0.956 Sum_probs=327.1
Q ss_pred EEEEECCCCCCCCC-CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHC
Q ss_conf 02330322348999-989998999998999769899996998789999999975588768-9999999999999999873
Q 002611 509 EILCQGFNWESHKS-GRWYMELKEKATELSSLGFSVIWLPPPTESVSPEGYMPRDLYNLS-SRYGNIDELKDVVNKFHDV 586 (900)
Q Consensus 509 ~i~~~~F~Wd~~~~-GG~l~Gi~~kLdYLk~LGvt~I~L~PIfes~s~hGYd~~Dy~~ID-p~lGt~edlk~LV~aaH~~ 586 (900)
++++|+|.||++++ ||+|+||+++|||||+||||+|||+||+++.++|||++.||++|| |+|||++||++||++||++
T Consensus 2 ~v~~~~F~~d~~~d~~G~~~gi~~~ldyl~~lGv~~i~l~Pi~~~~~~~gY~~~d~~~id~~~~Gt~~d~~~lv~~~h~~ 81 (405)
T 1ht6_A 2 QVLFQGFNWESWKQSGGWYNMMMGKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGK 81 (405)
T ss_dssp CCEEECCCTTGGGCTTCHHHHHHTTHHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHT
T ss_pred CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 62898577477898786899999989999975998899398866889999785322547975678999999999999987
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 989999704476335788889987668997-----7888987668998878-9998878998899977679996789999
Q 002611 587 GMKILGDVVLNHRCAHYQNQNGVWNIFGGR-----LNWDDRAVVADDPHFQ-GRGNKSSGDNFHAAPNIDHSQDFVRKDI 660 (900)
Q Consensus 587 GIkVILD~V~NHtg~~~~~~~g~~~~y~g~-----~~W~~~~v~~~~~~f~-~~g~~~~~~~~~~lpdLN~~np~Vre~i 660 (900)
||+||+|+|+||++.+++...+.|..|.+. .+|....+..+...|. +.+.+..++++.++|+||++||+||++|
T Consensus 82 Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~p~v~~~i 161 (405)
T 1ht6_A 82 GVQAIADIVINHRCADYKDSRGIYCIFEGGTSDGRLDWGPHMICRDDTKYSDGTANLDTGADFAAAPDIDHLNDRVQREL 161 (405)
T ss_dssp TCEEEEEECCSBCCCSEECTTSCEEECCCSSSSSTTCCCGGGBCTTCTTTCCSCSCCCSSCCCTTSCBBCTTCHHHHHHH
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99899997967526888787887113789886888788776361788776789886668887676770276999999999
Q ss_pred HHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCC-CCCCCCCCHHHHHHHHHHHHHCCCCC-
Q ss_conf 9999999987198737855545554202899999508956996012687765-56678770577899999986159984-
Q 002611 661 KEWLCWLRNEIGYDGWRLDFVRGFWGGYVKDYLEATEPYFAVGEYWDSLSYT-YGEMDHNQDAHRQRIIDWINAASGTA- 738 (900)
Q Consensus 661 ~~~l~~Wi~e~GVDGfRLD~A~~l~~~f~~~~~~~~~p~fliGEvw~~~~~l-~g~m~y~~~~~~~~i~~~~~~~~g~~- 738 (900)
+++++||++++||||||||+|++++.+||++++++++|.+++||+|+..++. .+.++|.+..+++.+..|+...++..
T Consensus 162 ~~~~~~w~~~~gvDGfR~D~~~~~~~~f~~~~~~~~~p~~~igE~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~g~~~~ 241 (405)
T 1ht6_A 162 KEWLLWLKSDLGFDAWRLDFARGYSPEMAKVYIDGTSPSLAVAEVWDNMATGGDGKPNYDQDAHRQNLVNWVDKVGGAAS 241 (405)
T ss_dssp HHHHHHHHHHHCCCEEEETTGGGSCHHHHHHHHHHHCCSCEEECCCCCCCBCTTSSBCSCCHHHHHHHHHHHHHHTGGGS
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf 99999997625998999835045889999999984189549998436886567543121110147899998753586433
Q ss_pred --CCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
Q ss_conf --334520467889953000143311101999998677887420313367878766677999379999999999479914
Q 002611 739 --GAFDVTTKGILHSALDRCEYWRLSDEKGKPPGVVGWWPSRAVTFIENHDTGSTQGHWRFPGGREMQGYAYILTHPGTP 816 (900)
Q Consensus 739 --s~fd~~l~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~P~~avnflesHDt~R~~s~~~~~~~~~klA~allltlPGvP 816 (900)
++|||++...+..++. +..+.+.+..+........+|.++++|++|||+.|+.+.+..+.++.++|++++||+||+|
T Consensus 242 ~~~vfdf~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~p~~~~~fl~nHD~~r~~~~~~~~~~~~~~a~a~llt~pG~P 320 (405)
T 1ht6_A 242 AGMVFDFTTKGILNAAVE-GELWRLIDPQGKAPGVMGWWPAKAVTFVDNHDTGSTQAMWPFPSDKVMQGYAYILTHPGIP 320 (405)
T ss_dssp SEEEECHHHHHHHHHHTT-TCGGGGSCTTSSCSSHHHHCGGGEEEESCCTTTSTTTCSSCCCGGGHHHHHHHHHHSSSEE
T ss_pred CCEEECHHHHHHHHHHHH-HHHHHHHHHHCCCCHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 220313166799999986-2588887653256104322805553046776776532344676779999999998389964
Q ss_pred EEECCCHHHH-HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCEEEEEEECCCCCCCCCCCCEEEEECCCCEE
Q ss_conf 6647871479-999999999999728434469935985169799999899899999479999999998829997289708
Q 002611 817 SVFYDHIFSH-YRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAIIDEKVAMKLGPGHYEPPSGSQNWSFVTEGRDYK 895 (900)
Q Consensus 817 ~IYyGdE~~W-l~~~ik~Li~lRk~~paL~~G~~~~l~~~~~v~a~~r~~~~lVvinn~~~~~~~~~~~~~l~~~g~~~~ 895 (900)
+||||+||+| ++++|++|++|||++++|+.|.++++..++++++|.|+++++|++|++........+.|++.+++..|.
T Consensus 321 ~iy~G~e~~W~~~~~~~~Li~lR~~~~al~~g~~~~~~~~~~v~af~R~~~~lv~~N~~~~~~~~~~~~~~~~~~~~~~~ 400 (405)
T 1ht6_A 321 CIFYDHFFNWGFKDQIAALVAIRKRNGITATSALKILMHEGDAYVAEIDGKVVVKIGSRYDVGAVIPAGFVTSAHGNDYA 400 (405)
T ss_dssp EEEHHHHHTSSCHHHHHHHHHHHHHTTCCTTCCEEEEEEETTEEEEEETTTEEEEESSCSCCGGGSCTTCEEEEEETTEE
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEECCEEEEEECCCCCCCCCCCCCCEEEECCCCEE
T ss_conf 68717875844999999999999868532367458983689879999899199998688765665887307983489678
Q ss_pred EEECC
Q ss_conf 98729
Q 002611 896 VWEAA 900 (900)
Q Consensus 896 vw~~~ 900 (900)
||++.
T Consensus 401 v~~~~ 405 (405)
T 1ht6_A 401 VWEKN 405 (405)
T ss_dssp EEEC-
T ss_pred EEECC
T ss_conf 87479
No 2
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=1.00 E-value=1 Score=527.84 Aligned_cols=371 Identities=20% Similarity=0.255 Sum_probs=269.8
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 14553013223456675211123689999999999988850233032234899998999899999899976989999699
Q 002611 469 AAEAYSIFRTTAPTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVIWLPP 548 (900)
Q Consensus 469 ~a~~yqif~~~~drF~~~~~~~~~~~~~~~r~~~g~~~~y~i~~~~F~Wd~~~~GG~l~Gi~~kLdYLk~LGvt~I~L~P 548 (900)
.+|+||||| +||+++...+ +.. .-...| +||||+||++||||||+||||+|||||
T Consensus 206 ~aViYqI~p---~~F~~~~~~~------------g~~----~~~~~~------~gGdl~Gi~~kLdYLk~LGvt~I~L~P 260 (645)
T 4aef_A 206 DRVFYQIMP---DKFARSRKIQ------------GIA----YPKDKY------WGGDLIGIKEKIDHLVNLGINAIYLTP 260 (645)
T ss_dssp GCCEEEECH---HHHCCCSSCC-------------------------------CCCCHHHHHHTHHHHHHHTCCEEEECC
T ss_pred CCEEEEEEC---CHHCCCCCCC------------CCC----CCCCCC------CCCCHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 887999952---0424899987------------536----776767------886999999836999876998899798
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC-----CCCCCCCCCCCCCCCCC
Q ss_conf 8789999999975588768999999999999999987398999970447633578888-----99876689977888987
Q 002611 549 PTESVSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQ-----NGVWNIFGGRLNWDDRA 623 (900)
Q Consensus 549 Ifes~s~hGYd~~Dy~~IDp~lGt~edlk~LV~aaH~~GIkVILD~V~NHtg~~~~~~-----~g~~~~y~g~~~W~~~~ 623 (900)
||+++++|||++.||++|||+|||++||++||++||++||+||||+|+||||.+|++. .+..++|.+++.|.+..
T Consensus 261 if~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~V~NHts~~h~wf~~~~~~~~~s~~~d~y~~~~~~ 340 (645)
T 4aef_A 261 IFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDGVFHHTSFFHPYFQDVVRKGENSSFKNFYRIIKFP 340 (645)
T ss_dssp CEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSHHHHHHHHHSTTCTTGGGBCBSSSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCEECCCC
T ss_conf 98798999958027775570029999999999986335888999951145666781055576528998755531724688
Q ss_pred CCCCC--------CCCCC--------CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCH
Q ss_conf 66899--------88789--------998878998899977679996789999999999998719873785554555420
Q 002611 624 VVADD--------PHFQG--------RGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGG 687 (900)
Q Consensus 624 v~~~~--------~~f~~--------~g~~~~~~~~~~lpdLN~~np~Vre~i~~~l~~Wi~e~GVDGfRLD~A~~l~~~ 687 (900)
..... ..+.. ...+..+.....+|+||++||+|+++|++++++|+ ++||||||+|++++++.+
T Consensus 341 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~pdLn~~np~V~~~~~~~~~~Wl-~~gvDGfR~D~a~~i~~~ 419 (645)
T 4aef_A 341 VVSKEFLQILHSKSSWEEKYKKIKSLGWNYESFFSVWIMPRLNHDNPKVREFIKNVILFWT-NKGVDGFRMDVAHGVPPE 419 (645)
T ss_dssp CSCTTHHHHHHHSCGGGTTHHHHHHHCCSBCEETTEEEEEBBCTTSHHHHHHHHHHHHHHH-HTTCCEEEETTGGGSCHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-HCCCCEEEECCCCCCCHH
T ss_conf 7654456556888654335565565563201234545676434369899999998877787-549877876331356256
Q ss_pred HHHHHHHHCCCC-EEEEECCCCCC-C----CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHH
Q ss_conf 289999950895-69960126877-6----55667877057789999998615998433452046788995300014331
Q 002611 688 YVKDYLEATEPY-FAVGEYWDSLS-Y----TYGEMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSALDRCEYWRL 761 (900)
Q Consensus 688 f~~~~~~~~~p~-fliGEvw~~~~-~----l~g~m~y~~~~~~~~i~~~~~~~~g~~s~fd~~l~~~l~~~l~~~~~~~l 761 (900)
||+.+.+++++. +++||+|++.. + ..+.|+|.. ...+..++...... ..+ +...+. .....
T Consensus 420 f~~~~~~~~~~~~~~~gE~~~~~~~~~~~~~~~~~n~~~---~~~~~~~~~~~~~~--~~~------~~~~~~--~~~~~ 486 (645)
T 4aef_A 420 VWKEVREALPKEKYLIGEVMDDARLWLFDKFHGVMNYRL---YDAILRFFGYEEIT--AEE------FLNELE--LLSSY 486 (645)
T ss_dssp HHHHHHHHSCTTCEEEECCCSCCGGGTTTTCSEEBCHHH---HHHHHHHTTSCCSC--HHH------HHHHHH--HHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCEECCHHH---HHHHHHHHHCCCCC--HHH------HHHHHH--HHHHH
T ss_conf 789877543013443221135312220233330003467---77788764115430--677------777888--77641
Q ss_pred HHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHH----------------
Q ss_conf 1101999998677887420313367878766677999379999999999479914664787147----------------
Q 002611 762 SDEKGKPPGVVGWWPSRAVTFIENHDTGSTQGHWRFPGGREMQGYAYILTHPGTPSVFYDHIFS---------------- 825 (900)
Q Consensus 762 ~~~~~~~~~~~~~~P~~avnflesHDt~R~~s~~~~~~~~~klA~allltlPGvP~IYyGdE~~---------------- 825 (900)
. ...+..+++|++|||++|+.+.++ +.++.++|++++||+||+||||||+|++
T Consensus 487 ~----------~~~~~~~~~fl~nHD~~R~~s~~g-d~~~~~~a~a~llt~pG~P~iyyGdE~G~~~~~~~~~~~~R~pm 555 (645)
T 4aef_A 487 Y----------GPAEYLMYNFLDNHDVERFLDIVG-DKRKYVCALVFLMTYKGIPSLFYGDEIGLRGINLQGMESSRAPM 555 (645)
T ss_dssp H----------GGGGGGCBCCSCCTTSCCHHHHHC-CHHHHHHHHHHHHHSSSBCEEETTGGGTCCCEEETTEEESCCCC
T ss_pred C----------CCCCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHCCCCCEEECCHHHCCCCCCCCCCCCCCCCC
T ss_conf 3----------531000133557788766343358-89999999999987489729987742087798978986565877
Q ss_pred -H--------HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEE---CCEEEEEEECCCCCCCCCCCCEEEEECCCC
Q ss_conf -9--------9999999999997284344699359851697999998---998999994799999999988299972897
Q 002611 826 -H--------YRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAII---DEKVAMKLGPGHYEPPSGSQNWSFVTEGRD 893 (900)
Q Consensus 826 -W--------l~~~ik~Li~lRk~~paL~~G~~~~l~~~~~v~a~~r---~~~~lVvinn~~~~~~~~~~~~~l~~~g~~ 893 (900)
| +++++|+|++|||++|+|+.|+++.+..+++++||.| +++++|++|+++... ..+++.++.+.
T Consensus 556 ~W~~~~~~~~l~~~~r~Li~lRk~~paL~~G~~~~~~~~~~v~af~R~~~~~~~lVv~N~s~~~~----~~~~v~lP~~~ 631 (645)
T 4aef_A 556 LWNEEEWDQRILEITKTLVKIRKNNKALLFGNFVPVKFKRKFMVYKREHMGERTIVAINYSNSRV----KELGITIPEYS 631 (645)
T ss_dssp CCCGGGSCHHHHHHHHHHHHHHHTCHHHHHCEEEEEEEETTEEEEEEEETTEEEEEEEECSSSCE----EETTEEECTTE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCEEEEEEEECCCEEEEEEECCCCCC----EEEEEECCCCC
T ss_conf 89976452899999999999983098986596699985997999999909988999999999973----79998448987
No 3
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=1.00 E-value=1 Score=523.27 Aligned_cols=388 Identities=15% Similarity=0.192 Sum_probs=286.4
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 11455301322345667521112368999999999998885023303223489999899989999989997698999969
Q 002611 468 LAAEAYSIFRTTAPTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVIWLP 547 (900)
Q Consensus 468 ~~a~~yqif~~~~drF~~~~~~~~~~~~~~~r~~~g~~~~y~i~~~~F~Wd~~~~GG~l~Gi~~kLdYLk~LGvt~I~L~ 547 (900)
..+++||||| +||+.....+.+. ....| +. ....+| +||||+||+++|||||+||||+|||+
T Consensus 224 ~~~viYqI~p---~rF~~~~~~n~~~---~~~~w-~~-----~~~~~~------~gGdl~Gi~~kLdyLk~LGvt~IwL~ 285 (696)
T 4aee_A 224 MGTVYYQIFI---DSFDNGDPNNDPP---NRIKK-TV-----PREYGY------YGGDLAGIMKHIDHLEDLGVETIYLT 285 (696)
T ss_dssp SSCCEEEECG---GGTCCCCGGGCCS---SCCCC-CS-----SCCSSC------CCCCHHHHHTTHHHHHHHTCCEEEEC
T ss_pred HCCEEEEEEH---HHHCCCCCCCCCC---CCCCC-CC-----CCCCCC------CCCCHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 4685999944---7854898777755---55555-67-----765566------77499999987689997699999989
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC-----CCCCCCCCCCCCCCCC
Q ss_conf 98789999999975588768999999999999999987398999970447633578888-----9987668997788898
Q 002611 548 PPTESVSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQ-----NGVWNIFGGRLNWDDR 622 (900)
Q Consensus 548 PIfes~s~hGYd~~Dy~~IDp~lGt~edlk~LV~aaH~~GIkVILD~V~NHtg~~~~~~-----~g~~~~y~g~~~W~~~ 622 (900)
|||+++++|||++.||++|||+|||++||++||++||++||+||||+|+||++.+|++. ++..++|.+++.|.+.
T Consensus 286 Pi~~s~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V~NHts~~~~~f~~~~~~~~~s~y~dwy~~~~~ 365 (696)
T 4aee_A 286 PIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDITMHHTNPCNELFVKALREGENSPYWEMFSFLSP 365 (696)
T ss_dssp CCEEESSSSCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECSSEECTTSHHHHHHHHHCTTSTTGGGBCBCSC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCC
T ss_conf 74268988995812224437456999999999999997799999942654357667889998752888988882573688
Q ss_pred CCCC---------CCCCC------------CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCC
Q ss_conf 7668---------99887------------89998878998899977679996789999999999998719873785554
Q 002611 623 AVVA---------DDPHF------------QGRGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFV 681 (900)
Q Consensus 623 ~v~~---------~~~~f------------~~~g~~~~~~~~~~lpdLN~~np~Vre~i~~~l~~Wi~e~GVDGfRLD~A 681 (900)
.... ....+ ...++|.++.++..+|+||++||+||++|++++++|+ ++||||||||+|
T Consensus 366 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~y~~~~~~~~~pdLN~~np~Vr~~i~~~~~~Wl-~~GvDGfRlDaa 444 (696)
T 4aee_A 366 PPKEIVELMLKYIDGEECRSRELYKLDYFRNNKPFYEAFFNIWLMAKFNHDNPRTVDYFIDITKFWI-DKGIDGFRIDVA 444 (696)
T ss_dssp CCHHHHHHHHHHHSSSSCCGGGGGGSHHHHHSCCSBCBGGGCTTCEEBCTTCHHHHHHHHHHHHHHH-TTTCCEEEETTG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHH-HCCCCEEEEECH
T ss_conf 8754222223346898644222333310158988555446878831115799999999999999998-679978998232
Q ss_pred CCCCCHHHHHHHHHC---CCC-EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHH
Q ss_conf 555420289999950---895-6996012687765566787705778999999861599843345204678899530001
Q 002611 682 RGFWGGYVKDYLEAT---EPY-FAVGEYWDSLSYTYGEMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSALDRCE 757 (900)
Q Consensus 682 ~~l~~~f~~~~~~~~---~p~-fliGEvw~~~~~l~g~m~y~~~~~~~~i~~~~~~~~g~~s~fd~~l~~~l~~~l~~~~ 757 (900)
++++.+||+++.+++ +|+ +++||+ +...|+.+ .+++++|+|.+...+...+..+.
T Consensus 445 ~~i~~~f~~~~~~~v~~~~p~~~~igE~-~~~~~l~~--------------------~~~d~~~n~~~~~~~~~~~~~~~ 503 (696)
T 4aee_A 445 MGIHYSWMKQYYEYIKNTYPDFLVLGEL-AENPRIYM--------------------DYFDSAMNYYLRKAILELLIYKR 503 (696)
T ss_dssp GGSCHHHHHHHHHHHHHHCTTCEEEECC-CSCGGGTT--------------------TTCSEEBCHHHHHHHHHHHTSCC
T ss_pred HHCCHHHHHHHHHHHHHHCCCCEEEECC-CCHHHHCC--------------------CCCCEEECCHHHHHHHHHHHCCC
T ss_conf 1089999999999998648981899454-62334407--------------------86335877078889999971489
Q ss_pred --HHHHHHHCCCCCCCCCCCCC----CCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHH------
Q ss_conf --43311101999998677887----420313367878766677999379999999999479914664787147------
Q 002611 758 --YWRLSDEKGKPPGVVGWWPS----RAVTFIENHDTGSTQGHWRFPGGREMQGYAYILTHPGTPSVFYDHIFS------ 825 (900)
Q Consensus 758 --~~~l~~~~~~~~~~~~~~P~----~avnflesHDt~R~~s~~~~~~~~~klA~allltlPGvP~IYyGdE~~------ 825 (900)
...+...+. .....+|. .++||++|||++|+.+.++.+. ++++|++++|++||+||||||+|++
T Consensus 504 ~~~~~~~~~l~---~~~~~~~~~~~~~~~nfl~nHD~~R~~s~~~~~~-~~kla~a~llt~pG~P~IYyGdE~G~~~~~d 579 (696)
T 4aee_A 504 IDLNEFISRIN---NVYAYIPHYKALSLYNMLGSHDVPRIKSMVQNNK-LLKLMYVLIFALPGSPVIYYGDEIGLEGGRD 579 (696)
T ss_dssp SCHHHHHHHHH---HHHTTSCHHHHHHCEECSCCTTSCCHHHHHCCHH-HHHHHHHHHHHSSSEEEEETTGGGTCCCCST
T ss_pred CCHHHHHHHHH---HHHHHCCHHHHHHEEEECCCCCCCEEHHHCCCCH-HHHHHHHHHHHCCCCEEEEECCCCCCCCCCC
T ss_conf 88999999999---9998653123211067307999873222419739-9999999998589960898131105358999
Q ss_pred --------H--------HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEE---CCEEEEEEECCCCCCC-------
Q ss_conf --------9--------9999999999997284344699359851697999998---9989999947999999-------
Q 002611 826 --------H--------YRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAII---DEKVAMKLGPGHYEPP------- 879 (900)
Q Consensus 826 --------W--------l~~~ik~Li~lRk~~paL~~G~~~~l~~~~~v~a~~r---~~~~lVvinn~~~~~~------- 879 (900)
| ++++|++|++|||++++|+.|.++++..++++++|.| ++.++|++|.+.....
T Consensus 580 p~~R~~~~W~~~~~~~~l~~~~k~Li~lRk~~~al~~g~~~~~~~~~~v~af~R~~~~~~~lVv~N~s~~~~~v~l~~~~ 659 (696)
T 4aee_A 580 PDNRRPMIWDRGNWDLELYEHIKKLIRIYKSCRSMRHGYFLVENLGSNLLFIKRWINNEEIIFLLNVSSKDISVDLKKLG 659 (696)
T ss_dssp TTTCCCCCCCGGGSCHHHHHHHHHHHHHHHHCHHHHSCEEEEEECSTTEEEEEEEETTEEEEEEEECSSSCEECCCC---
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCCCEEEEECCCCEEEEEEECCCCEEEEEEECCCCCEEEECCCCC
T ss_conf 65447858887777569999999999997439776078479995599799999990999899999899998899734788
Q ss_pred -------C-----CCCCEEEEECCCCEEEEEC
Q ss_conf -------9-----9988299972897089872
Q 002611 880 -------S-----GSQNWSFVTEGRDYKVWEA 899 (900)
Q Consensus 880 -------~-----~~~~~~l~~~g~~~~vw~~ 899 (900)
+ ..+..++.++++++.||+.
T Consensus 660 ~~~~dllsg~~~~~~g~~~l~L~p~~~~il~~ 691 (696)
T 4aee_A 660 KYSFDIYNEKNIDQHVENNVLLRGYGFLILGS 691 (696)
T ss_dssp -CCEETTTCCC--------CEECTTCEEEEES
T ss_pred CEEEECCCCCEECCCCEEEEEECCCEEEEEEE
T ss_conf 73799666946523880799989998999995
No 4
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=1.00 E-value=1 Score=514.70 Aligned_cols=366 Identities=19% Similarity=0.273 Sum_probs=267.6
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 21145530132234566752111236899999999999888502330322348999989998999998999769899996
Q 002611 467 KLAAEAYSIFRTTAPTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVIWL 546 (900)
Q Consensus 467 ~~~a~~yqif~~~~drF~~~~~~~~~~~~~~~r~~~g~~~~y~i~~~~F~Wd~~~~GG~l~Gi~~kLdYLk~LGvt~I~L 546 (900)
...+++||||| +||........+. ....|.... ......| .||+|+||+++|||||+||||+|||
T Consensus 128 ~~~~viYqi~~---~~F~~~~~~~~~~---~~~~w~~~~---~~~~~~f------~~G~~~gi~~~LdyLk~LGvt~I~L 192 (585)
T 1wzl_A 128 AKEAVIYQIFP---ERFANGDPSNDPP---GTEQWAKDA---RPRHDSF------YGGDLKGVIDRLPYLEELGVTALYF 192 (585)
T ss_dssp GGGCCEEEECG---GGTCCCCGGGCCT---TCCCCCTTC---CCCTTCC------CCCCHHHHHHTHHHHHHHTCCEEEE
T ss_pred HCCCEEEEECC---HHHCCCCCCCCCC---CCCCCCCCC---CCCCCCC------CCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 11546999814---1325899665655---556667667---8764545------7879899998758998769988997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC-----CCCCCCCCCCCCCCC
Q ss_conf 998789999999975588768999999999999999987398999970447633578888-----998766899778889
Q 002611 547 PPPTESVSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQ-----NGVWNIFGGRLNWDD 621 (900)
Q Consensus 547 ~PIfes~s~hGYd~~Dy~~IDp~lGt~edlk~LV~aaH~~GIkVILD~V~NHtg~~~~~~-----~g~~~~y~g~~~W~~ 621 (900)
+|||+++++|||++.||++|||+|||++||++||++||++||+||||+|+||++.++.+. +|..++|.+++.|..
T Consensus 193 ~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~~~~g~~s~y~~~y~~~~ 272 (585)
T 1wzl_A 193 TPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGDQFFAFRDVLQKGEQSRYKDWFFIED 272 (585)
T ss_dssp CCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCTTSHHHHHHHHHGGGCTTGGGBCBSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEECC
T ss_conf 88666888899286553652724699999999999999879999999767767776587999874599987667468568
Q ss_pred CCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHH---CC
Q ss_conf 87668998878999887899-889997767999678999999999999871987378555455542028999995---08
Q 002611 622 RAVVADDPHFQGRGNKSSGD-NFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGGYVKDYLEA---TE 697 (900)
Q Consensus 622 ~~v~~~~~~f~~~g~~~~~~-~~~~lpdLN~~np~Vre~i~~~l~~Wi~e~GVDGfRLD~A~~l~~~f~~~~~~~---~~ 697 (900)
.... . ....++..++ +...+|+||++||+||++|++++++|+ ++||||||||+|++++.+||+++.++ .+
T Consensus 273 ~~~~-~----~~~~~y~~~~~~~~~~pdln~~~~~vr~~l~~~~~~Wl-~~gvDGfR~D~a~~~~~~f~~~~~~~v~~~~ 346 (585)
T 1wzl_A 273 FPVS-K----TSRTNYETFAVQVPAMPKLRTENPEVKEYLFDVARFWM-EQGIDGWRLDVANEVDHAFWREFRRLVKSLN 346 (585)
T ss_dssp SSCC-C----SSCCSBCBSSSSCTTCBBBCTTSHHHHHHHHHHHHHHH-HTTCCEEEETTGGGSCHHHHHHHHHHHHHHC
T ss_pred CCCC-C----CCCCCEEECCCCCCCCCEECCCCHHHHHHHHHHHHHHH-HCCCEEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 8888-8----98988137146999878417699899999999999998-5798099983534479999999999999778
Q ss_pred CC-EEEEECCCCC-CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHH--HHHHHHHCCCCCCCCC
Q ss_conf 95-6996012687-765566787705778999999861599843345204678899530001--4331110199999867
Q 002611 698 PY-FAVGEYWDSL-SYTYGEMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSALDRCE--YWRLSDEKGKPPGVVG 773 (900)
Q Consensus 698 p~-fliGEvw~~~-~~l~g~m~y~~~~~~~~i~~~~~~~~g~~s~fd~~l~~~l~~~l~~~~--~~~l~~~~~~~~~~~~ 773 (900)
|+ +++||+|++. .|+.+ .++++.+++.++..+...+.... ...+...+. ....
T Consensus 347 p~~~~igE~~~~~~~~~~~--------------------~~~d~~~n~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~ 403 (585)
T 1wzl_A 347 PDALIVGEIWHDASGWLMG--------------------DQFDSVMNYLFRESVIRFFATGEIHAERFDAELT---RARM 403 (585)
T ss_dssp TTCEEEECCSSCCGGGCSS--------------------SSCSEEBCHHHHHHHHHHHTSCCSCHHHHHHHHH---HHHT
T ss_pred CCEEEEEEECCCHHHHHCC--------------------CCCCEEECHHHHHHHHHHHCCCCCCHHHHHHHHH---HHHH
T ss_conf 9979999862764787648--------------------9847898888999999986379999999999999---9998
Q ss_pred CCC----CCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHH--------------H--------H
Q ss_conf 788----7420313367878766677999379999999999479914664787147--------------9--------9
Q 002611 774 WWP----SRAVTFIENHDTGSTQGHWRFPGGREMQGYAYILTHPGTPSVFYDHIFS--------------H--------Y 827 (900)
Q Consensus 774 ~~P----~~avnflesHDt~R~~s~~~~~~~~~klA~allltlPGvP~IYyGdE~~--------------W--------l 827 (900)
.|| ..+++|++|||++|+.+.++.+.+++++|++++|++||+|+||||+|++ | +
T Consensus 404 ~y~~~~~~~~~~~~~nHD~~r~~~~~~~~~~~~~~a~~~~~~~pG~P~iy~G~E~g~~~~~d~~~r~~~~W~~~~~~~~l 483 (585)
T 1wzl_A 404 LYPEQAAQGLWNLLDSHDTERFLTSCGGNEAKFRLAVLFQMTYLGTPLIYYGDEIGMAGATDPDCLRPMIWEEKEQNRGL 483 (585)
T ss_dssp TSCHHHHTTCEEESCCTTSCCHHHHTTTCHHHHHHHHHHHHHSSSEEEEETTGGGTCCCCSTTGGGCCCCCCGGGSCHHH
T ss_pred HCCHHHHCCCEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 64523420125722788714567761895999999999998589971899400138579999110368899877774899
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEEEC--CCEEEEEE---CCEEEEEEECCCC
Q ss_conf 9999999999972843446993598516--97999998---9989999947999
Q 002611 828 RQEIEALLSVRKRNKIHCRSRVEIVKAE--RDVYAAII---DEKVAMKLGPGHY 876 (900)
Q Consensus 828 ~~~ik~Li~lRk~~paL~~G~~~~l~~~--~~v~a~~r---~~~~lVvinn~~~ 876 (900)
+++|++|++|||++++|+.|.++++..+ +++++|.| ++.++|++|.+..
T Consensus 484 ~~~~~~Li~lRk~~~al~~g~~~~~~~~~~~~v~af~R~~~~~~~lvv~N~~~~ 537 (585)
T 1wzl_A 484 FEFYKELIRLRHRLASLTRGNVRSWHADKQANLYAFVRTVQDQHVGVVLNNRGE 537 (585)
T ss_dssp HHHHHHHHHHHHHCHHHHHCEEEEEEEETTTTEEEEEEEETTEEEEEEEECSSS
T ss_pred HHHHHHHHHHHHHCHHHCCCCEEEEEECCCCCEEEEEEECCCCEEEEEEECCCC
T ss_conf 999999999983298870872899975799989999998399989999989999
No 5
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=1.00 E-value=1 Score=514.34 Aligned_cols=367 Identities=17% Similarity=0.249 Sum_probs=272.5
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 11455301322345667521112368999999999998885023303223489999899989999989997698999969
Q 002611 468 LAAEAYSIFRTTAPTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVIWLP 547 (900)
Q Consensus 468 ~~a~~yqif~~~~drF~~~~~~~~~~~~~~~r~~~g~~~~y~i~~~~F~Wd~~~~GG~l~Gi~~kLdYLk~LGvt~I~L~ 547 (900)
..+++||||| +||.....-..+. ....| +.. ......| .||+|+||+++|||||+||||+|||+
T Consensus 129 ~~~viYqi~~---~~F~~~~~~~~~~---~~~~w-~~~---~~~~~~~------~~Gd~~gi~~~LdyLk~LGvt~I~L~ 192 (583)
T 1ea9_C 129 KDAIFYQIFP---ERFANGDTRNDPE---GTLPW-GSA---DPTPSCF------FGGDLQGVIDHLDHLSKLGVNAVYFT 192 (583)
T ss_dssp HHCCCCEECS---TTSCCCCSCSCSS---CCSCC-CSS---SCCCSSC------CCCCHHHHHHTHHHHHHHTCSEEEEC
T ss_pred CCCEEEEECH---HHHCCCCCCCCCC---CCCCC-CCC---CCCCCCC------CCCCHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 3665999862---7756899766765---55655-677---8865666------78699999984589987599889979
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC-----CCCCCCCCCCCCCCCCC
Q ss_conf 9878999999997558876899999999999999998739899997044763357888-----89987668997788898
Q 002611 548 PPTESVSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQN-----QNGVWNIFGGRLNWDDR 622 (900)
Q Consensus 548 PIfes~s~hGYd~~Dy~~IDp~lGt~edlk~LV~aaH~~GIkVILD~V~NHtg~~~~~-----~~g~~~~y~g~~~W~~~ 622 (900)
|||+++++|||++.||++|||+|||++||++||++||++||+||||+|+||++.++.+ .+|..++|.+++.|...
T Consensus 193 Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~~~~g~~s~y~~~y~~~~~ 272 (583)
T 1ea9_C 193 PLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPFVDVLKNGEKSKYKDWFHIRSL 272 (583)
T ss_dssp CCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCCSBCCTTTHHHHHHHTTTTTCTTTTSSCBCSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCC
T ss_conf 87668888996865524347124999999999999998899999997466677766879998745889976672574688
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHH---CCCC
Q ss_conf 7668998878999887899889997767999678999999999999871987378555455542028999995---0895
Q 002611 623 AVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGGYVKDYLEA---TEPY 699 (900)
Q Consensus 623 ~v~~~~~~f~~~g~~~~~~~~~~lpdLN~~np~Vre~i~~~l~~Wi~e~GVDGfRLD~A~~l~~~f~~~~~~~---~~p~ 699 (900)
+.. .. ...+++.++++...+|+||++||+||++|++++++|++++||||||||+|++++.+||+++.++ .+|.
T Consensus 273 ~~~-~~---~~~~~y~~~~~~~~~pdln~~~p~Vr~~l~~~~~~W~~~~gvDGfR~D~~~~~~~~f~~~~~~~v~~~~p~ 348 (583)
T 1ea9_C 273 PLE-VV---DGIPTYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRETGIDGWRLDVANEVSHQFWREFRRVVKQANPD 348 (583)
T ss_dssp SCC-CT---TSCCSBCBSSSCTTSBBCCTTSHHHHHHHHHHHHHHHHHHCCSEEEETTCTTSCHHHHHHHHHHHHHHCTT
T ss_pred CCC-CC---CCCCCCEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 887-88---88877301588788562033999999999999999988639609995651338999999999999866879
Q ss_pred -EEEEECCCCC-CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHH--HHHHHHHCCCCCCCCCCC
Q ss_conf -6996012687-765566787705778999999861599843345204678899530001--433111019999986778
Q 002611 700 -FAVGEYWDSL-SYTYGEMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSALDRCE--YWRLSDEKGKPPGVVGWW 775 (900)
Q Consensus 700 -fliGEvw~~~-~~l~g~m~y~~~~~~~~i~~~~~~~~g~~s~fd~~l~~~l~~~l~~~~--~~~l~~~~~~~~~~~~~~ 775 (900)
+++||+|++. .|+. ..++++.+++.++..+...+.+.. ...+...+.. ....+
T Consensus 349 ~~~igE~~~~~~~~~~--------------------~~~~d~~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~ 405 (583)
T 1ea9_C 349 AYILGEVWHESSIWLE--------------------GDQFDAVMNYPFTNAVLDFFIHQIADAEKFSFMLGK---QLAGY 405 (583)
T ss_dssp CEEEECCCSCCTTTTT--------------------TTSCSEEBCHHHHHHHHHHTTSCCSCHHHHHHHHHH---TTTTS
T ss_pred EEEEEEECCCHHHHHC--------------------CCCCCEEECHHHHHHHHHHHCCCCCCHHHHHHHHHH---HHHHC
T ss_conf 5999987387388866--------------------898588877799999999972799899999999999---99875
Q ss_pred C----CCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHH--------------H--------HHH
Q ss_conf 8----7420313367878766677999379999999999479914664787147--------------9--------999
Q 002611 776 P----SRAVTFIENHDTGSTQGHWRFPGGREMQGYAYILTHPGTPSVFYDHIFS--------------H--------YRQ 829 (900)
Q Consensus 776 P----~~avnflesHDt~R~~s~~~~~~~~~klA~allltlPGvP~IYyGdE~~--------------W--------l~~ 829 (900)
| ..+++|++|||++|+.+.++.+.+++++|++++|++||+|+||||+|++ | +++
T Consensus 406 ~~~~~~~~~~~~~nHD~~r~~~~~~~~~~~~~la~~~~~~~pG~P~iy~G~E~g~~~~~d~~~r~~~~W~~~~~~~~~~~ 485 (583)
T 1ea9_C 406 PRQASEVMFNLLDSHDTARLLTQADGDKRKMKLAVLFQFTYFGTPCIYYGDEVGLDGGHDPGCRKCMEWDETKHDKDLFA 485 (583)
T ss_dssp CHHHHHTCEECSCCTTSCCHHHHHCSCHHHHHHHHHHHTTSSSEECCCSSCSSCCCCCSHHHHTCCCCCCTTSCCHHHHH
T ss_pred CHHHHHHHEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHCCCCCCCCCCCCHHHHH
T ss_conf 40444332152478884156666298099999999999728997178823002866899801037858887777289999
Q ss_pred HHHHHHHHHHHCCCCCCCCEEEEEEC--CCEEEEEE---CCEEEEEEECCCCC
Q ss_conf 99999999972843446993598516--97999998---99899999479999
Q 002611 830 EIEALLSVRKRNKIHCRSRVEIVKAE--RDVYAAII---DEKVAMKLGPGHYE 877 (900)
Q Consensus 830 ~ik~Li~lRk~~paL~~G~~~~l~~~--~~v~a~~r---~~~~lVvinn~~~~ 877 (900)
+|++|++|||++++|+.|.++++..+ +++++|.| ++.++|++|.+...
T Consensus 486 ~~~~Li~lRk~~~al~~g~~~~~~~~~~~~v~af~R~~~~~~~lvv~N~~~~~ 538 (583)
T 1ea9_C 486 FYQTVIRLRQAHAALRTGTFKFLTAEKNSRQIAYLREDDQDTILVVMNNDKAG 538 (583)
T ss_dssp HHHHHHHHHHHCSHHHHCCCCCSBCCSSCCEEEEEEECSSCEEEEEEECSSSC
T ss_pred HHHHHHHHHHHCHHHCCCCEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCC
T ss_conf 99999999654867516866999627999899999985999899999899998
No 6
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=1.00 E-value=1 Score=512.30 Aligned_cols=387 Identities=17% Similarity=0.290 Sum_probs=279.8
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEE
Q ss_conf 72114553013223456675211123689999999999988850233032234899998999899999899976989999
Q 002611 466 EKLAAEAYSIFRTTAPTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVIW 545 (900)
Q Consensus 466 ~~~~a~~yqif~~~~drF~~~~~~~~~~~~~~~r~~~g~~~~y~i~~~~F~Wd~~~~GG~l~Gi~~kLdYLk~LGvt~I~ 545 (900)
+...+++||||| +||+.......|. ....| +.. ......| .||+|+||+++|||||+||||+||
T Consensus 131 W~~~~viYqi~~---~~F~~~~~~~~~~---~~~~w-~~~---~~~~~~~------~~G~~~gi~~~LdyLk~LGvt~I~ 194 (588)
T 1j0h_A 131 WVKDTVWYQIFP---ERFANGNPSISPE---GSRPW-GSE---DPTPTSF------FGGDLQGIIDHLDYLVDLGITGIY 194 (588)
T ss_dssp GGGGCCEEEECG---GGTCCSCGGGSCT---TCCCT-TSS---CCCSSCC------CCCCHHHHHHTHHHHHHHTCCEEE
T ss_pred CCCCCEEEEECC---HHHCCCCCCCCCC---CCCCC-CCC---CCCCCCC------CCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf 213667999812---2436999776755---55556-777---8765535------787999999988999876999899
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC-----CCCCCCCCCCCCCC
Q ss_conf 6998789999999975588768999999999999999987398999970447633578888-----99876689977888
Q 002611 546 LPPPTESVSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQ-----NGVWNIFGGRLNWD 620 (900)
Q Consensus 546 L~PIfes~s~hGYd~~Dy~~IDp~lGt~edlk~LV~aaH~~GIkVILD~V~NHtg~~~~~~-----~g~~~~y~g~~~W~ 620 (900)
|+|||+++++|||++.||++|||+|||++||++||++||++||+||||+|+||++.++++. +|..++|.+++.|.
T Consensus 195 L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~~~~g~~s~y~dwy~~~ 274 (588)
T 1j0h_A 195 LTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEFAPFQDVWKNGESSKYKDWFHIH 274 (588)
T ss_dssp ECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCHHHHHHHHHGGGCTTGGGBCBS
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 79864589999928666575584679999999999999988999999987676756523577897548999754554335
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHH---CC
Q ss_conf 987668998878999887899889997767999678999999999999871987378555455542028999995---08
Q 002611 621 DRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGGYVKDYLEA---TE 697 (900)
Q Consensus 621 ~~~v~~~~~~f~~~g~~~~~~~~~~lpdLN~~np~Vre~i~~~l~~Wi~e~GVDGfRLD~A~~l~~~f~~~~~~~---~~ 697 (900)
..... . ...++|.++.+...+|+||++||+||++|++++++|++++||||||||+|++++.+||+++.++ .+
T Consensus 275 ~~~~~-~----~~~~~y~~~~~~~~~pdLn~~np~Vr~~l~~~~~~Wl~~~giDGfR~D~a~~~~~~f~~~~~~~v~~~~ 349 (588)
T 1j0h_A 275 EFPLQ-T----EPRPNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIREFDIDGWRLDVANEIDHEFWREFRQEVKALK 349 (588)
T ss_dssp SSSCC-C----SSSCSBCBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHHHCCCEEEETTGGGSCHHHHHHHHHHHHHHC
T ss_pred CCCCC-C----CCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 68877-7----999886774698886500349989999999999999986598689995355479999999999778758
Q ss_pred CC-EEEEECCCCC-CCCCC-----CCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCC
Q ss_conf 95-6996012687-76556-----67877057789999998615998433452046788995300014331110199999
Q 002611 698 PY-FAVGEYWDSL-SYTYG-----EMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSALDRCEYWRLSDEKGKPPG 770 (900)
Q Consensus 698 p~-fliGEvw~~~-~~l~g-----~m~y~~~~~~~~i~~~~~~~~g~~s~fd~~l~~~l~~~l~~~~~~~l~~~~~~~~~ 770 (900)
|+ +++||+|++. .|+.+ .|||. ++..+.+++...... .. .+...+.. .
T Consensus 350 p~~~~igE~~~~~~~~~~g~~~d~~~n~~---~~~~~~~~~~~~~~~--~~------~~~~~l~~--------~------ 404 (588)
T 1j0h_A 350 PDVYILGEIWHDAMPWLRGDQFDAVMNYP---FTDGVLRFFAKEEIS--AR------QFANQMMH--------V------ 404 (588)
T ss_dssp TTCEEEECCSSCCGGGCSSSSCSEEBCHH---HHHHHHHHHTSCCSC--HH------HHHHHHHH--------H------
T ss_pred CCEEEEEEECCCHHHHHCCCCCCEEECHH---HHHHHHHHHHCCCCC--HH------HHHHHHHH--------H------
T ss_conf 98599997557515565389757797738---899999998359999--99------99999999--------9------
Q ss_pred CCCCCC----CCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHH--------------H------
Q ss_conf 867788----7420313367878766677999379999999999479914664787147--------------9------
Q 002611 771 VVGWWP----SRAVTFIENHDTGSTQGHWRFPGGREMQGYAYILTHPGTPSVFYDHIFS--------------H------ 826 (900)
Q Consensus 771 ~~~~~P----~~avnflesHDt~R~~s~~~~~~~~~klA~allltlPGvP~IYyGdE~~--------------W------ 826 (900)
...|| ..+++|++|||++|+.+.++.+.+++++|++++|++||+||||||+|++ |
T Consensus 405 -~~~y~~~~~~~~~~~~~nHD~~r~~~~~~~~~~~~~~a~~~~~~~pG~P~iy~G~E~g~~~~~dp~~r~~~~W~~~~~~ 483 (588)
T 1j0h_A 405 -LHSYPNNVNEAAFNLLGSHDTSRILTVCGGDIRKVKLLFLFQLTFTGSPCIYYGDEIGMTGGNDPECRKCMVWDPMQQN 483 (588)
T ss_dssp -HHTSCHHHHHTCBCBSCCTTSCCHHHHTTTCHHHHHHHHHHHHHSSSCCEEETTGGGTCCCCSTTGGGCCCCCCTTTSC
T ss_pred -HHHCCCCHHHHHEEECCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf -9864632110322623789974044551983999999999998489974899401358668999654188389987771
Q ss_pred --HHHHHHHHHHHHHHCCCCCCCCEEEEEE--CCCEEEEEE---CCEEEEEEECCCCCCC----CC--------------
Q ss_conf --9999999999997284344699359851--697999998---9989999947999999----99--------------
Q 002611 827 --YRQEIEALLSVRKRNKIHCRSRVEIVKA--ERDVYAAII---DEKVAMKLGPGHYEPP----SG-------------- 881 (900)
Q Consensus 827 --l~~~ik~Li~lRk~~paL~~G~~~~l~~--~~~v~a~~r---~~~~lVvinn~~~~~~----~~-------------- 881 (900)
++++|++|++|||++++|+.|.++++.. ++++++|.| ++.++|++|.+..... ..
T Consensus 484 ~~l~~~~~~Li~lRk~~~al~~g~~~~~~~~~~~~v~a~~R~~~~~~~lvv~N~~~~~~~~~l~~~~~~~~~~~ll~~~~ 563 (588)
T 1j0h_A 484 KELHQHVKQLIALRKQYRSLRRGEISFLHADDEMNYLIYKKTDGDETVLVIINRSDQKADIPIPLDARGTWLVNLLTGER 563 (588)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHCEEEEECCSCTTTEEEEEEECSSCEEEEEEECSSSCEEEECCCCCSSEEEEETTTCCE
T ss_pred HHHHHHHHHHHHHHHHCHHHCCCCEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCCEEEECCCCCCCCEEEEECCCCE
T ss_conf 89999999999998349887177589999779998999999879998999998999988996676566760588025860
Q ss_pred ----CCCEEEEECCCCEEEEEC
Q ss_conf ----988299972897089872
Q 002611 882 ----SQNWSFVTEGRDYKVWEA 899 (900)
Q Consensus 882 ----~~~~~l~~~g~~~~vw~~ 899 (900)
.+...+.++++++.|++.
T Consensus 564 ~~~~~~~~~~~l~p~~~~v~~~ 585 (588)
T 1j0h_A 564 FAAEAETLCTSLPPYGFVLYAI 585 (588)
T ss_dssp EECCSSSCEEEECTTCEEEEEE
T ss_pred EECCCCEEEEEECCCEEEEEEE
T ss_conf 4303883679989998999999
No 7
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=1.00 E-value=1 Score=512.26 Aligned_cols=374 Identities=29% Similarity=0.491 Sum_probs=291.0
Q ss_pred CCEEEEECCCCCCCC-CCCCH-HHHHHHHHHHHHCCCCEEEECCCC----------CCCCCCCCCCCCCCCCC--CCCCC
Q ss_conf 850233032234899-99899-989999989997698999969987----------89999999975588768--99999
Q 002611 507 GFEILCQGFNWESHK-SGRWY-MELKEKATELSSLGFSVIWLPPPT----------ESVSPEGYMPRDLYNLS--SRYGN 572 (900)
Q Consensus 507 ~y~i~~~~F~Wd~~~-~GG~l-~Gi~~kLdYLk~LGvt~I~L~PIf----------es~s~hGYd~~Dy~~ID--p~lGt 572 (900)
...+++|.|.|+++. .|||| +||+++|||||+||||+|||+||+ ++.++|||+ |++|| |+|||
T Consensus 15 ~~~vi~q~F~w~~~~~~gGd~~~gi~~~LdyLk~LGvt~IwL~Pi~e~~~~~~~~~~~~~~~GY~---~~~id~~p~~Gt 91 (527)
T 1gcy_A 15 GDEIILQGFHWNVVREAPNDWYNILRQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYF---WHDFNKNGRYGS 91 (527)
T ss_dssp GCCCEEECCCTTHHHHSTTTHHHHHHHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTT---CSSSCSCSSSCC
T ss_pred CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCC
T ss_conf 98689998776887565885999999989999864987899497604665446677788888855---210798778989
Q ss_pred HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCC
Q ss_conf 999999999998739899997044763357888899876-68997788898766899887899988789988-9997767
Q 002611 573 IDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQNGVWN-IFGGRLNWDDRAVVADDPHFQGRGNKSSGDNF-HAAPNID 650 (900)
Q Consensus 573 ~edlk~LV~aaH~~GIkVILD~V~NHtg~~~~~~~g~~~-~y~g~~~W~~~~v~~~~~~f~~~g~~~~~~~~-~~lpdLN 650 (900)
++|||+||++||++||+||||+|+||++.+++. +.|. ++ .+|+..........|. ++++.++.+ .++||||
T Consensus 92 ~~dfk~Lv~~aH~~GI~VilD~V~NHt~~~~~~--~~~~~~~---~~~y~~~~~~~~~~~~--~~~~~~~~f~~~~~dLn 164 (527)
T 1gcy_A 92 DAQLRQAASALGGAGVKVLYDVVPNHMNRGYPD--KEINLPA---GQGFWRNDCADPGNYP--NDCDDGDRFIGGDADLN 164 (527)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCTTCSS--CSCCCCS---SSSCBGGGSCCCSSSC--BTTBSSCCSTTSTTBBC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCC--CCCCCCC---CCHHCCCCCCCCCCCC--CCCCCCCCCCCCCCCCC
T ss_conf 999999999999879989999802675788888--6005778---6010233568898736--67556766326677515
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCC-CCEEEEECCCCCCCCCCCCCCCCHH-HHHHHH
Q ss_conf 99967899999999999987198737855545554202899999508-9569960126877655667877057-789999
Q 002611 651 HSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGGYVKDYLEATE-PYFAVGEYWDSLSYTYGEMDHNQDA-HRQRII 728 (900)
Q Consensus 651 ~~np~Vre~i~~~l~~Wi~e~GVDGfRLD~A~~l~~~f~~~~~~~~~-p~fliGEvw~~~~~l~g~m~y~~~~-~~~~i~ 728 (900)
++||+||++|+++++||++++||||||||++++++.+|+++++++++ |.+++||+|....-. ....|.+.. ..+.+.
T Consensus 165 ~~np~Vr~~i~~~~~~w~~~~gvDGfRlDa~~~i~~~f~~~~~~~~~~p~~~vgE~~~~~~~~-~~~~y~~~~~~~~~~~ 243 (527)
T 1gcy_A 165 TGHPQVYGMFRDEFTNLRSQYGAGGFRFDFVRGYAPERVNSWMTDSADNSFCVGELWKGPSEY-PNWDWRNTASWQQIIK 243 (527)
T ss_dssp TTSHHHHHHHHHHHHHHHHHSCEEEEEESCGGGSCHHHHHHHHHHHCTTSEEEECCCCCGGGS-CTTSGGGGSCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCC-CCCCCCCCCCHHHHHH
T ss_conf 498799999999999999866998699821114889999999997368966999864799865-5432223440566788
Q ss_pred HHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC------CHHHH
Q ss_conf 998615998433452046788995300014331110199999867788742031336787876667799------93799
Q 002611 729 DWINAASGTAGAFDVTTKGILHSALDRCEYWRLSDEKGKPPGVVGWWPSRAVTFIENHDTGSTQGHWRF------PGGRE 802 (900)
Q Consensus 729 ~~~~~~~g~~s~fd~~l~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~P~~avnflesHDt~R~~s~~~~------~~~~~ 802 (900)
.|.... ..+.|||.+...+...+. ..+++ .... .....+|.++++|++|||+.|+.+.++. ..+++
T Consensus 244 ~~~~~~--~~~~fdf~~~~~l~~~~~--~~~~l-~~~~---~~~~~~~~~~~~f~~nHD~~r~~~~~~g~~~~~~~~~~~ 315 (527)
T 1gcy_A 244 DWSDRA--KCPVFDFALKERMQNGSI--ADWKH-GLNG---NPDPRWREVAVTFVDNHDTGYSPGQNGGQHHWALQDGLI 315 (527)
T ss_dssp HHHHHH--TSCEECHHHHHHHHHSCG--GGGGG-SGGG---CSSHHHHTTEEECSCCTTTSBCSSGGGBCCSSCCCGGGH
T ss_pred HHHHCC--CCCEECHHHHHHHHHHHH--HHHHH-HHCC---CCCCCCHHHCEEEEECCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 776425--772544477899999998--75333-2048---846557636537876798998666567643566772689
Q ss_pred HHHHHHHHHCCCEEEEECCCHHHH-HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEE--CCEEEEEEECCCCCCC
Q ss_conf 999999994799146647871479-9999999999997284344699359851697999998--9989999947999999
Q 002611 803 MQGYAYILTHPGTPSVFYDHIFSH-YRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAII--DEKVAMKLGPGHYEPP 879 (900)
Q Consensus 803 klA~allltlPGvP~IYyGdE~~W-l~~~ik~Li~lRk~~paL~~G~~~~l~~~~~v~a~~r--~~~~lVvinn~~~~~~ 879 (900)
++|++++|++||+|+||||+||+| ++++|++|++|||++++|+.|.++++..++++|++.| +++++|++|++...+.
T Consensus 316 ~~a~a~~lt~~G~P~iy~G~E~~W~l~~~~~~Li~lRk~~~al~~g~~~~~~~~~~v~a~~r~~~~~~lv~~N~~~~~~~ 395 (527)
T 1gcy_A 316 RQAYAYILTSPGTPVVYWDHMYDWGYGDFIRQLIQVRRAAGVRADSAISFHSGYSGLVATVSGSQQTLVVALNSDLGNPG 395 (527)
T ss_dssp HHHHHHHHHSSSEEEEEHHHHHTSSCHHHHHHHHHHHHHHTCCTTCEEEECTTSSSEEEEEECSSCEEEEEESCCCCCGG
T ss_pred HHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCHHHCCCCEEEEECCCCEEEEEECCCCEEEEEECCCCCCCE
T ss_conf 99999996799866165253237708999999999998582104772589964798899995689869999877788862
Q ss_pred -CCCCCEEEEECC--CCEEEEEC
Q ss_conf -999882999728--97089872
Q 002611 880 -SGSQNWSFVTEG--RDYKVWEA 899 (900)
Q Consensus 880 -~~~~~~~l~~~g--~~~~vw~~ 899 (900)
...+.|++.+++ ..+.+|..
T Consensus 396 ~v~~g~~~~~~~~~~~~~~~w~~ 418 (527)
T 1gcy_A 396 QVASGSFSEAVNASNGQVRVWRS 418 (527)
T ss_dssp GTCCSCCEEEEEETTTTEEEEEC
T ss_pred EECCCCEEEEEECCCCCEEEEEC
T ss_conf 63288458998468995799972
No 8
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=1.00 E-value=1 Score=509.96 Aligned_cols=397 Identities=17% Similarity=0.226 Sum_probs=288.1
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 14553013223456675211123689999999999988850233032234899998999899999899976989999699
Q 002611 469 AAEAYSIFRTTAPTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVIWLPP 548 (900)
Q Consensus 469 ~a~~yqif~~~~drF~~~~~~~~~~~~~~~r~~~g~~~~y~i~~~~F~Wd~~~~GG~l~Gi~~kLdYLk~LGvt~I~L~P 548 (900)
.+++||||| |||+....-+.+.. ... .. . .......| +||||+||+++|||||+||||+|||+|
T Consensus 106 ~~viY~i~~---drF~~gd~~nd~~~---~~~-~~--~-~~~~~~~~------~gGdl~gi~~~Ldyl~~LGv~aI~l~P 169 (601)
T 3edf_A 106 GDAIYQIMP---DRFANGDPSNDNVA---GMR-EQ--A-DRRHGGGR------HGGDIRGTIDHLDYIAGLGFTQLWPTP 169 (601)
T ss_dssp TCCEEEECH---HHHCCSCGGGSSCT---TCS-CC--C-CTTSTTSC------CCCCHHHHHHTHHHHHHTTCCEEEESC
T ss_pred CCEEEEEEH---HHHCCCCCCCCCCC---CCC-CC--C-CCCCCCCC------CCCCHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 575999945---87568998757676---755-66--6-76665654------574899999978999876999899896
Q ss_pred CCCCC----CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87899----99999975588768999999999999999987398999970447633578888998766899778889876
Q 002611 549 PTESV----SPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQNGVWNIFGGRLNWDDRAV 624 (900)
Q Consensus 549 Ifes~----s~hGYd~~Dy~~IDp~lGt~edlk~LV~aaH~~GIkVILD~V~NHtg~~~~~~~g~~~~y~g~~~W~~~~v 624 (900)
|+++. ++|||++.||++|||+|||++||++||++||++||+||||+|+||++.+|++.... ++.+++.|.+...
T Consensus 170 i~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~--p~~dw~~~~~~~~ 247 (601)
T 3edf_A 170 LVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVVLSHIGKHHWWMKDL--PTPDWINYGGKFV 247 (601)
T ss_dssp CEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSGGGGSC--SSTTSBGGGGSCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHC--CCCCCEEECCCCC
T ss_conf 52478988887885820005445447999999999999997699899997776667752466507--7667455079888
Q ss_pred CCCCC---CCCCCCC------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHH
Q ss_conf 68998---8789998------87899889997767999678999999999999871987378555455542028999995
Q 002611 625 VADDP---HFQGRGN------KSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGGYVKDYLEA 695 (900)
Q Consensus 625 ~~~~~---~f~~~g~------~~~~~~~~~lpdLN~~np~Vre~i~~~l~~Wi~e~GVDGfRLD~A~~l~~~f~~~~~~~ 695 (900)
..... .+..... +..+|+...+||||++||+||++|+++++||++++||||||||++++++.+||+++.++
T Consensus 248 ~~~~~~~~~~d~~~~~~~~~~~~~~wf~~~lpdLN~~np~V~~~l~~~~~~Wi~~~GVDGfRlD~~~~~~~~f~~~~~~~ 327 (601)
T 3edf_A 248 PTQHHRVAVQDPYAAQADSENFTKGWFVEGMPDLNQTNPLVANYLIQNNIWWIEYAGLSGLRIDTYGYSDGAFLTEYTRR 327 (601)
T ss_dssp BCCCCGGGGGCTTCCHHHHHHHHHSBSSTTSCBBCTTSHHHHHHHHHHHHHHHHHHTCSEEEESSGGGSCHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH
T ss_conf 87665554458987612365443553546666113399799999999999998625977899606455788999999999
Q ss_pred C---CCC-EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH-------CCCCCCCCCCHHHHHHHHHHHCH----HHHH
Q ss_conf 0---895-6996012687765566787705778999999861-------59984334520467889953000----1433
Q 002611 696 T---EPY-FAVGEYWDSLSYTYGEMDHNQDAHRQRIIDWINA-------ASGTAGAFDVTTKGILHSALDRC----EYWR 760 (900)
Q Consensus 696 ~---~p~-fliGEvw~~~~~l~g~m~y~~~~~~~~i~~~~~~-------~~g~~s~fd~~l~~~l~~~l~~~----~~~~ 760 (900)
+ +|+ +++||+|.... ..+..|..+ ..++.++|+|++...+..++.+. ....
T Consensus 328 v~~~~p~~~~vgE~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~~v~nf~~~~~l~~~~~~~~~~~~~~~ 393 (601)
T 3edf_A 328 LMAEYPRLNMVGQEWSTRV--------------PVVARWQRGKANFDGYTSHLPSLMDFPLVDAMRNALSKTGEENGLNE 393 (601)
T ss_dssp HHHHCTTCEEEECCCCSCH--------------HHHHTTSTTCCCTTCCCCCCCEEBCHHHHHHHHHHHHCTTSSSTTHH
T ss_pred HHHHCCCEEEEEEECCCCH--------------HHHHHHHCCCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 9875898279840037866--------------77766624642233324568747770899999999835634567999
Q ss_pred HHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHH---------------
Q ss_conf 11101999998677887420313367878766677999379999999999479914664787147---------------
Q 002611 761 LSDEKGKPPGVVGWWPSRAVTFIENHDTGSTQGHWRFPGGREMQGYAYILTHPGTPSVFYDHIFS--------------- 825 (900)
Q Consensus 761 l~~~~~~~~~~~~~~P~~avnflesHDt~R~~s~~~~~~~~~klA~allltlPGvP~IYyGdE~~--------------- 825 (900)
+...+.. ......|...++|++|||++|+.+.++.+..++++|++++||+||+|+||||+|++
T Consensus 394 l~~~~~~--~~~~~~~~~~~~fl~NHD~~R~~s~~~~~~~~~k~a~alllt~pG~P~IYyG~E~G~~~~~~~~~d~~~R~ 471 (601)
T 3edf_A 394 VYETLSL--DYLYPEPQNLVLFGGNHDMARMFSAAGEDFDRWRMNLVFLMTMPRIPQFYSGDEILMTSTVKGRDDASYRR 471 (601)
T ss_dssp HHHHHGG--GGGSSCGGGSEEESCCTTSCCHHHHTTTCHHHHHHHHHHHHHSSSEEEEETTGGGTCCCCCSSCCGGGGCC
T ss_pred HHHHHHH--HCCCCCCCCEEEEECCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEHCCCCCCCCCCCCCHHHHH
T ss_conf 9998765--22467833047751267888730202888999999999998659975998001116568887789842552
Q ss_pred -----H-------------------HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEE---CCEEEEEEECCCCCC
Q ss_conf -----9-------------------9999999999997284344699359851697999998---998999994799999
Q 002611 826 -----H-------------------YRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAII---DEKVAMKLGPGHYEP 878 (900)
Q Consensus 826 -----W-------------------l~~~ik~Li~lRk~~paL~~G~~~~l~~~~~v~a~~r---~~~~lVvinn~~~~~ 878 (900)
| ++.+|++|++|||++++|+.|.+..+..++++++|.| ++.++|++|++....
T Consensus 472 ~~p~~W~~~~~~~F~~~~~~~~~~~l~~~~~~Li~lRk~~~al~~G~~~~~~~~~~v~af~R~~~~~~vlVv~N~s~~~~ 551 (601)
T 3edf_A 472 DFPGGWAGDKANAFSGAGLTSQQRAAQDLVRKLANWRKNQPVIHNGRLMHFGPEENTWVYFRYNKDKRIMVAMNNNDKPM 551 (601)
T ss_dssp CCTTSSTTCSSBTTTTBTCCHHHHHHHHHHHHHHHHHHTCHHHHHSEEEECCCBTTEEEEEEECSSEEEEEEEECSSSCE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEECCCCEEEEEEECCCCCE
T ss_conf 47667675434676732356245899999999999986383434785699973698999999839988999998989978
Q ss_pred C--------------------CCC---CCEEEEECCCCEEEEEC
Q ss_conf 9--------------------999---88299972897089872
Q 002611 879 P--------------------SGS---QNWSFVTEGRDYKVWEA 899 (900)
Q Consensus 879 ~--------------------~~~---~~~~l~~~g~~~~vw~~ 899 (900)
. ++. .+-++.++++++.||+.
T Consensus 552 ~~~l~~~~~~l~~~~~~~dllsg~~~~~~~~l~L~p~~~~Vl~~ 595 (601)
T 3edf_A 552 TLPTARFQEMLKGAPSGVDFLSGKTVGLGRELRLAPKSVVVIEL 595 (601)
T ss_dssp EEEGGGGHHHHTTCCEEEETTTCCEEECSSEEEECTTCEEEEEE
T ss_pred EEECCCCHHHCCCCCCEEECCCCCEEEECCEEEECCCEEEEEEE
T ss_conf 99776312101578704883569678604279989998999999
No 9
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=1.00 E-value=1 Score=508.04 Aligned_cols=373 Identities=18% Similarity=0.271 Sum_probs=269.1
Q ss_pred HHHHHHHHHCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 7211455301322345667-521112368999999999998885023303223489999899989999989997698999
Q 002611 466 EKLAAEAYSIFRTTAPTFF-EEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVI 544 (900)
Q Consensus 466 ~~~~a~~yqif~~~~drF~-~~~~~~~~~~~~~~r~~~g~~~~y~i~~~~F~Wd~~~~GG~l~Gi~~kLdYLk~LGvt~I 544 (900)
|-..+++||||| +||. .....+.+..+.....|. ......+| ++|||+||+++|||||+||||+|
T Consensus 8 W~~~~viYqi~~---~~F~~~gd~~~d~~~~~~~~~w~-----~~~~~~~~------~~Gdl~gi~~~LdyL~~LGv~~I 73 (488)
T 2wc7_A 8 WVKHAVFYQIFP---DRFARSKQPRKRLLQEARWEDWD-----SMPTLQGY------KGGDLWGIMEDLDYIQNLGINAI 73 (488)
T ss_dssp HHHTCCEEEECG---GGTCCCSSCCCCSCTTCCGGGGG-----GCHHHHC-------CCCCHHHHHHTHHHHHHHTCCEE
T ss_pred CCCCCEEEEECC---CCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCC------CCCCHHHHHHHHHHHHHCCCCEE
T ss_conf 123655999863---41057999667766554445556-----78765766------78699999984599997599989
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCC-----CCCCCCCCCCCC
Q ss_conf 969987899999999755887689999999999999999873989999704476335788889-----987668997788
Q 002611 545 WLPPPTESVSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQN-----GVWNIFGGRLNW 619 (900)
Q Consensus 545 ~L~PIfes~s~hGYd~~Dy~~IDp~lGt~edlk~LV~aaH~~GIkVILD~V~NHtg~~~~~~~-----g~~~~y~g~~~W 619 (900)
||+|||++.++|||++.||++|||+|||++||++||++||++||+||||+|+||++.+|+++. +..++|.+++.|
T Consensus 74 ~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~s~~~~~f~~~~~~~~~s~y~~~y~~ 153 (488)
T 2wc7_A 74 YFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDGVFNHSSRGFFFFHDVLENGPHSPWVNWFKI 153 (488)
T ss_dssp EESCCEEECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSBCCSSSHHHHHHHHHGGGCTTGGGBCB
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEE
T ss_conf 98987778888997876756557124999999999999998899899996778677767879999854899987774562
Q ss_pred CCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCH-HHHHHHHH-
Q ss_conf 89876689988789--998878998899977679996789999999999998719873785554555420-28999995-
Q 002611 620 DDRAVVADDPHFQG--RGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGG-YVKDYLEA- 695 (900)
Q Consensus 620 ~~~~v~~~~~~f~~--~g~~~~~~~~~~lpdLN~~np~Vre~i~~~l~~Wi~e~GVDGfRLD~A~~l~~~-f~~~~~~~- 695 (900)
...... .+.+ ..++..|++...+|+||++||+||++|++++++|+ ++||||||||++++++.+ ||+++.++
T Consensus 154 ~~~~~~----~~~~~~~~~~~~~~~~~~~pdln~~np~vr~~i~~~~~~Wl-~~gvDGfR~D~~~~i~~~~~~~~~~~~~ 228 (488)
T 2wc7_A 154 EGWPLS----PYNGEFPANYVGWAGNRALPEFNHDNPEVREYIMEIAEYWL-KFGIDGWRLDVPFEIKTPGFWQEFRDRT 228 (488)
T ss_dssp CSSSCC----SSCTTSCCCBCBGGGCTTSBBBCTTSHHHHHHHHHHHHHHH-HHTCCEEEESSGGGCCCTTHHHHHHHHH
T ss_pred CCCCCC----CCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHH-HCCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 588877----77777788765658988767015599999999999999999-7799999980525468689999999999
Q ss_pred --CCCC-EEEEECCCCC-CCCC-----CCCCCCCHHHHHHHHHHHHHCCC---CCCCCCC------HHHHHHHHHHHCHH
Q ss_conf --0895-6996012687-7655-----66787705778999999861599---8433452------04678899530001
Q 002611 696 --TEPY-FAVGEYWDSL-SYTY-----GEMDHNQDAHRQRIIDWINAASG---TAGAFDV------TTKGILHSALDRCE 757 (900)
Q Consensus 696 --~~p~-fliGEvw~~~-~~l~-----g~m~y~~~~~~~~i~~~~~~~~g---~~s~fd~------~l~~~l~~~l~~~~ 757 (900)
.+|. +++||+|.+. .|+. +.++|. ++..+.+++..... +.....+ .. ..+...+.
T Consensus 229 ~~~~p~~~~vgE~~~~~~~~~~~~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--- 301 (488)
T 2wc7_A 229 KAINPEAYIVGEVWGDSRQWLDGTQFDGVMNYL---FAGPTIAFAAGDRVVLEQVQSRDYQPYPPLFA-AEYATKIQ--- 301 (488)
T ss_dssp HHHCTTCEEEECCCSCCGGGCSSSSCSEEEEHH---HHHHHHHHHTGGGCCGGGCCTTTCCCCSCCCH-HHHHHHHH---
T ss_pred HHHCCCEEEEEEECCCCHHHHCCCCCCCEECCH---HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH-HHHHHHHH---
T ss_conf 854898189998557717764477758240715---89999999825764321124444445567899-99999999---
Q ss_pred HHHHHHHCCCCCCCCCCCC----CCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHH--------
Q ss_conf 4331110199999867788----7420313367878766677999379999999999479914664787147--------
Q 002611 758 YWRLSDEKGKPPGVVGWWP----SRAVTFIENHDTGSTQGHWRFPGGREMQGYAYILTHPGTPSVFYDHIFS-------- 825 (900)
Q Consensus 758 ~~~l~~~~~~~~~~~~~~P----~~avnflesHDt~R~~s~~~~~~~~~klA~allltlPGvP~IYyGdE~~-------- 825 (900)
.. ...+| ..+++|++|||++|+.+.++.+.+++++|++++||+||+|+||||+|++
T Consensus 302 -----~~-------~~~~~~~~~~~~~~f~~nHD~~R~~~~~~~~~~~~~~a~~~ll~~pG~P~iy~G~E~g~~~~~d~~ 369 (488)
T 2wc7_A 302 -----EV-------LQLYPWEIQLTQLNLLASHDTARLMTIAGGDIASVELSTLLLLTFPGAPSIYYGDEVGLPGGIDPD 369 (488)
T ss_dssp -----HH-------HTSSCHHHHTTCEECSCCTTSCCHHHHTTTCHHHHHHHHHHHHTSSSEEEEETTGGGTCCCCCC--
T ss_pred -----HH-------HHHCCCHHHCCEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCH
T ss_conf -----99-------986551210100675355445568776378599999999999828998579873035757999912
Q ss_pred ----------H---HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEE---CCEEEEEEECCCC
Q ss_conf ----------9---9999999999997284344699359851697999998---9989999947999
Q 002611 826 ----------H---YRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAII---DEKVAMKLGPGHY 876 (900)
Q Consensus 826 ----------W---l~~~ik~Li~lRk~~paL~~G~~~~l~~~~~v~a~~r---~~~~lVvinn~~~ 876 (900)
| ++++|++|++|||++++|+.|.++.+..++++++|.| +++++|++|.+..
T Consensus 370 ~r~~~~~~~~~~~~~~~~~~~Li~lRk~~~~l~~g~~~~~~~~~~v~a~~R~~~~~~~~v~~N~~~~ 436 (488)
T 2wc7_A 370 SRRGFPLEANWNQEIFNTHRQLITIRQTYPALRTGDYQVLYAQGQLYLFARTLGTEELIIAINAGTS 436 (488)
T ss_dssp --CCCTTC-CCCHHHHHHHHHHHHHHHHCTHHHHSEEEEEEEETTEEEEEEEETTEEEEEEEECSSS
T ss_pred HHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEEEECCCCEEEEEEECCCC
T ss_conf 3337788443688999999999999723920247876999418979999998799889999989898
No 10
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=1.00 E-value=1 Score=501.77 Aligned_cols=370 Identities=19% Similarity=0.257 Sum_probs=268.7
Q ss_pred HHHHHHHCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 1145530132234566-752111236899999999999888502330322348999989998999998999769899996
Q 002611 468 LAAEAYSIFRTTAPTF-FEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVIWL 546 (900)
Q Consensus 468 ~~a~~yqif~~~~drF-~~~~~~~~~~~~~~~r~~~g~~~~y~i~~~~F~Wd~~~~GG~l~Gi~~kLdYLk~LGvt~I~L 546 (900)
..+++||||| +|| .....-+.+... ..+.|.. ......| ++|||+||+++|||||+||||+|||
T Consensus 5 ~~~viYqi~~---~~F~~~gd~~~~~~g~-~~~~~~~-----~~~~~~~------~~G~~~gi~~~LdyL~~LGv~~I~l 69 (475)
T 2z1k_A 5 EGAFFYQIFP---DRFFRAGPPGRPAPAG-PFEPWEA-----PPTLRGF------KGGTLWGVAEKLPYLLDLGVEAIYL 69 (475)
T ss_dssp SSCCEEEECG---GGSCCCSCCCSSCCCS-CCCCTTS-----CCCSSCC------CCCCHHHHHHTHHHHHHHTCCEEEE
T ss_pred CCCEEEEECC---CEECCCCCCCCCCCCC-CCCCCCC-----CCCCCCC------CCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 3765999813---7126798965677766-6565567-----8875655------7879999999768999729988997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC-----CCCCCCCCCCCCCCC
Q ss_conf 998789999999975588768999999999999999987398999970447633578888-----998766899778889
Q 002611 547 PPPTESVSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQ-----NGVWNIFGGRLNWDD 621 (900)
Q Consensus 547 ~PIfes~s~hGYd~~Dy~~IDp~lGt~edlk~LV~aaH~~GIkVILD~V~NHtg~~~~~~-----~g~~~~y~g~~~W~~ 621 (900)
+||+++.++|||++.||++|||+|||++|||+||++||++||+||||+|+||++.++++. +|..++|.+++.|..
T Consensus 70 ~Pi~~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~~~~~~~f~~~~~~g~~s~y~~~y~~~~ 149 (475)
T 2z1k_A 70 NPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDGVFNHTGRGFFAFQHLMENGEQSPYRDWYHVKG 149 (475)
T ss_dssp CCCEEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSHHHHHHHHHGGGCTTGGGBCBCS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCEEECCC
T ss_conf 98767888888587776744735699999999999999889989999714624477788999975489997765136178
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCH-HHHHHHHH---CC
Q ss_conf 876689988789998878998899977679996789999999999998719873785554555420-28999995---08
Q 002611 622 RAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGG-YVKDYLEA---TE 697 (900)
Q Consensus 622 ~~v~~~~~~f~~~g~~~~~~~~~~lpdLN~~np~Vre~i~~~l~~Wi~e~GVDGfRLD~A~~l~~~-f~~~~~~~---~~ 697 (900)
.... .+.+.+++..+++...+|+||++||+||++|++++++|+ ++||||||||++++++.+ ||+++.++ .+
T Consensus 150 ~~~~----~~~~~~~y~~~~~~~~~pdln~~np~v~~~i~~~~~~w~-~~gvDGfR~D~~~~~~~~~~~~~~~~~~~~~~ 224 (475)
T 2z1k_A 150 FPLK----AYTAHPNYEAWWGNPELPKLKVETPAVREYLLAVAEHWI-RFGVDGWRLDVPNEIPDPTFWREFRQRVKGAN 224 (475)
T ss_dssp SSCC----TTSSSCSBCBGGGCTTSBBBCTTSHHHHHHHHHHHHHHH-HHTCCEEEESSGGGCCCHHHHHHHHHHHHHHC
T ss_pred CCCC----CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-HCCCCEEEECCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 8876----778887733257989868204599999999999999999-77997995064144797999999999876228
Q ss_pred CC-EEEEECCCCC-CCCCC-----CCCCCCHHHHHHHHHHHHHCCCC---CCCCCCH-----HHHHHHHHHHCHHHHHHH
Q ss_conf 95-6996012687-76556-----67877057789999998615998---4334520-----467889953000143311
Q 002611 698 PY-FAVGEYWDSL-SYTYG-----EMDHNQDAHRQRIIDWINAASGT---AGAFDVT-----TKGILHSALDRCEYWRLS 762 (900)
Q Consensus 698 p~-fliGEvw~~~-~~l~g-----~m~y~~~~~~~~i~~~~~~~~g~---~s~fd~~-----l~~~l~~~l~~~~~~~l~ 762 (900)
|. +++||+|.+. .++.+ .++|. ++..+.+++...... .....+. ....+...+ .
T Consensus 225 p~~~~igE~~~~~~~~~~~~~~d~~~n~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--------~ 293 (475)
T 2z1k_A 225 PEAYIVGEIWEEADFWLQGDMFDAVMNYP---LARAVLGFVGGEALDRDLAAQTGLGRIEPLQALAFSHRL--------E 293 (475)
T ss_dssp TTCEEEECCSSCCSGGGSSSSCSEEBCHH---HHHHHHHHHHGGGSCHHHHTTSTTCSCCCCCHHHHHHHH--------H
T ss_pred CCCEEEEEECCCCCCCCCCCCCCEEECHH---HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH--------H
T ss_conf 98279998557863114578767254736---899999997078643222233333555678999999999--------9
Q ss_pred HHCCCCCCCCCCC----CCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHH-------------
Q ss_conf 1019999986778----87420313367878766677999379999999999479914664787147-------------
Q 002611 763 DEKGKPPGVVGWW----PSRAVTFIENHDTGSTQGHWRFPGGREMQGYAYILTHPGTPSVFYDHIFS------------- 825 (900)
Q Consensus 763 ~~~~~~~~~~~~~----P~~avnflesHDt~R~~s~~~~~~~~~klA~allltlPGvP~IYyGdE~~------------- 825 (900)
.. ...+ +..+++|++|||++|+.+.++.+.++.++|++++|++||+|+||||+|++
T Consensus 294 ~~-------~~~~~~~~~~~~~~f~~nHD~~R~~~~~~~~~~~~~~a~a~ll~~pG~P~iy~G~E~g~~~~~d~~~r~~~ 366 (475)
T 2z1k_A 294 DL-------FGRYRPEVVRAQMNLLTSHDTPRLLSLMRGSVERARLALALLFLLPGNPTVYYGEEVGMAGGKDPENRGGM 366 (475)
T ss_dssp HH-------TTSSCHHHHTTCEECSCCTTSCCHHHHTTTCHHHHHHHHHHHTTSSSEEEEETTGGGTCCCCSTTTTCCCC
T ss_pred HH-------HHHCCCHHHHHHEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHCCCC
T ss_conf 99-------98654122121056236886556777618839999999999981899877984124586799982213698
Q ss_pred -H--------HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEECCEEEEEEECCCC
Q ss_conf -9--------99999999999972843446993598516979999989989999947999
Q 002611 826 -H--------YRQEIEALLSVRKRNKIHCRSRVEIVKAERDVYAAIIDEKVAMKLGPGHY 876 (900)
Q Consensus 826 -W--------l~~~ik~Li~lRk~~paL~~G~~~~l~~~~~v~a~~r~~~~lVvinn~~~ 876 (900)
| ++++|++|+++||++++|+.|.+..+..++++++|.| +.++|++|.+..
T Consensus 367 ~W~~~~~~~~l~~~~~~Li~lRk~~~~l~~g~~~~~~~~~~v~a~~R-~~~lv~~N~~~~ 425 (475)
T 2z1k_A 367 VWEEARWQKDLRETVKRLARLRKEHPALRTAPYLRIYAQDGHLAFAR-GPYLAVVNASPH 425 (475)
T ss_dssp CCCGGGSCHHHHHHHHHHHHHHHHCTHHHHSCCEEEEEETTEEEEEE-TTEEEEEECSSS
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCEEEEECCCCEEEEEE-CEEEEEEECCCC
T ss_conf 98866662799999999999984597555785699950798999997-729999999998
Done!