Query         002613
Match_columns 900
No_of_seqs    346 out of 2137
Neff          6.2 
Searched_HMMs 13730
Date          Tue Mar 26 15:50:24 2013
Command       hhsearch -i /local_scratch/syshi/lefta3m/002613.a3m -d /local_scratch/syshi/scop70.hhm -v 0 -o /local_scratch/syshi/H1_1333-1336//hhsearch_scop/002613hhsearch_scop 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d2afwa1 c.56.5.8 (A:33-361) Gl 100.0 9.6E-35   7E-39  264.0  25.5  243   70-337    12-326 (329)
  2 d1tkja1 c.56.5.4 (A:1-277) Ami 100.0 5.7E-34 4.1E-38  258.4  25.6  222   82-339     2-277 (277)
  3 d1rtqa_ c.56.5.4 (A:) Aminopep 100.0 1.1E-34   8E-39  263.6  20.1  234   81-341    14-290 (291)
  4 d3bi1a3 c.56.5.5 (A:57-117,A:3 100.0   6E-34 4.4E-38  258.3  21.7  236   82-343     7-304 (304)
  5 d1de4c3 c.56.5.5 (C:122-189,C: 100.0 2.3E-33 1.7E-37  254.1  20.6  233   84-343    14-293 (294)
  6 d1vhoa2 c.56.5.4 (A:3-69,A:153  99.8 9.3E-18 6.8E-22  141.5  16.4  198   89-337     3-247 (248)
  7 d1yloa2 c.56.5.4 (A:1-66,A:148  99.8 1.9E-18 1.4E-22  146.5  12.9  195   90-339     3-254 (264)
  8 g1q7l.1 c.56.5.4 (A:,B:) Amino  99.8 1.7E-17 1.3E-21  139.6  16.7  225   86-345     3-278 (280)
  9 d1z2la1 c.56.5.4 (A:4-212,A:33  99.8 7.1E-18 5.2E-22  142.4  14.0  127   86-246     5-143 (293)
 10 d1cg2a1 c.56.5.4 (A:26-213,A:3  99.7 1.1E-16 7.8E-21  133.9  17.5  214   86-339    15-275 (276)
 11 d1vhea2 c.56.5.4 (A:3-72,A:163  99.7   2E-17 1.4E-21  139.2  12.7  200   87-340     3-261 (275)
 12 d2fvga2 c.56.5.4 (A:1-64,A:149  99.7 1.3E-16 9.4E-21  133.3  10.6  190   92-337     2-248 (255)
 13 d1r3na1 c.56.5.4 (A:18-247,A:3  99.7 3.9E-15 2.8E-19  122.7  16.1  130   81-245    10-159 (322)
 14 d2grea2 c.56.5.4 (A:3-73,A:187  99.6 7.9E-15 5.7E-19  120.4  14.2  190   86-335     3-228 (233)
 15 d1fnoa4 c.56.5.4 (A:1-207,A:32  99.6 1.8E-14 1.3E-18  117.9  15.8  206   87-339     2-293 (295)
 16 d1vgya1 c.56.5.4 (A:2-180,A:29  99.3 4.3E-11 3.1E-15   93.5  13.6  125   86-246     2-148 (262)
 17 d1lfwa1 c.56.5.4 (A:1-186,A:38  99.3 1.6E-10 1.2E-14   89.3  14.9  126   84-246    11-166 (272)
 18 d1ysja1 c.56.5.4 (A:4-177,A:29  98.3 1.5E-05 1.1E-09   53.5  14.2  123   88-246     6-142 (261)
 19 d1xmba1 c.56.5.4 (A:37-215,A:3  98.3 5.6E-05 4.1E-09   49.4  16.6  109  102-246    25-148 (273)
 20 d1y0ya2 c.56.5.4 (A:164-351,A:  98.1 2.8E-06 2.1E-10   58.8   5.3  126  195-339    15-187 (255)
 21 d1y7ea2 c.56.5.4 (A:4-100,A:23  93.3   0.012 8.6E-07   32.7   1.1  114  109-243    32-160 (322)

No 1  
>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.6e-35  Score=264.00  Aligned_cols=243  Identities=22%  Similarity=0.298  Sum_probs=171.9

Q ss_pred             CCCCCCCCCCC--CCCCCHHHHHH-HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCC
Q ss_conf             99998745359--99999999999-9999882699999998899999999999995110147840189996623578632
Q 002613           70 MPPPLTADQAG--KRGFSEFEAIK-HVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANR  146 (900)
Q Consensus        70 lP~~~~~~~~~--~~~fs~erA~~-~L~~Lt~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~v~vd~~~~~~g~~~  146 (900)
                      -|+.++.++..  +.+.+.++.++ +|+.+  ++||+.||++++++++||++++++++.    +.+++.+.|..+.    
T Consensus        12 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~--l~pR~~Gs~g~~~a~~~i~~~~~~~g~----~~~~~~~~f~~~~----   81 (329)
T d2afwa1          12 QPAILNSSALRQIAEGTSISEMWQNDLQPL--LIERYPGSPGSYAARQHIMQRIQRLQA----DWVLEIDTFLSQT----   81 (329)
T ss_dssp             CCCCCCHHHHHHHHHHCCHHHHHHHTTGGG--CSCCCTTSHHHHHHHHHHHHHHHTSSS----CCEEEEEEEEECC----
T ss_pred             CCCCCCHHHHHHHHHCCCHHHHHHHHHHHH--HCCCCCCCHHHHHHHHHHHHHHHHHCC----CCEEEEEEEEECC----
T ss_conf             888789999999875069899999854675--089798897999999999999998579----9727888888545----


Q ss_pred             CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCC-------CCCCCCHHHHHHHHHHHHHHHHC--
Q ss_conf             334544562011145246999982788785798879998304665699-------99889810799999999999852--
Q 002613          147 LVSGAFMGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAA-------EGAGDCSSCVAVMLELARAMSQW--  217 (900)
Q Consensus       147 ~~gg~~~~~~~~y~~~~NViv~i~g~~~~~~~~~~ILl~aH~DSv~~s-------pGA~DdgsGVA~lLE~aR~L~~~--  217 (900)
                               ...+.+..|||++++|+     ++++|+|+|||||++.+       |||+|||+|||+|||+||+|++.  
T Consensus        82 ---------~~~~~~~~Nvia~l~g~-----~~~~ili~aHyDs~~~~~~~~~~~pGA~DnaSGvA~lLElAR~l~~~~~  147 (329)
T d2afwa1          82 ---------PYGYRSFSNIISTLNPT-----AKRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARALDKKLL  147 (329)
T ss_dssp             ---------TTSSEEEEEEEEESSTT-----SSEEEEEEEECCCCCCCCBTTBCCCCTTTTHHHHHHHHHHHHHTHHHHH
T ss_pred             ---------CCCCCEEEEEEEEECCC-----CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             ---------56883468999996799-----9734999864046776655446889977761779999999999987565


Q ss_pred             ------CCCCCCCEEEEEECCCCCC--------CCCHHHHHHC---------------------------CCC-CH----
Q ss_conf             ------6999970899994699789--------8540899870---------------------------099-70----
Q 002613          218 ------AHGFKNAVIFLFNTGEEEG--------LNGAHSFVTQ---------------------------AGP-HP----  251 (900)
Q Consensus       218 ------~~~p~~~Iiflf~~aEE~g--------L~GS~~fi~~---------------------------~Gp-~~----  251 (900)
                            +.+|+++|+|+||+|||.|        +.||++|+++                           .|. ++    
T Consensus       148 ~~~~~~~~~p~~tI~fv~f~gEE~G~~~~~~~~l~GS~~~a~~~~~~~~~~~~~~~~~~~~i~~~inlD~ig~~~~~~~~  227 (329)
T d2afwa1         148 SLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPN  227 (329)
T ss_dssp             TTC------CCEEEEEEEESCCSCSSSCCSSSSCHHHHHHHHHHHTSBSSTTCSSCBTTTTEEEEEEECSCCSSSCCBCC
T ss_pred             HHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHCEEEEEEECCCCCCCCCEEE
T ss_conf             53320268998438999845631464566544443579999986641464223454320020266653145579884367


Q ss_pred             ------HHHH------HHHHHCCCCCCCHHHHHHHHCC--CCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf             ------4799------9887328997302346532169--9999984478742299808997542899989998899489
Q 002613          252 ------WAVE------NFAAAAKYPSGQVTAQDLFASG--AITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDL  317 (900)
Q Consensus       252 ------~li~------~y~~~a~~P~~~~l~~~~f~~g--~ips~TD~~~F~~~~gipgld~a~~~~~~~YHT~~Dt~~~  317 (900)
                            +..+      ...+..............+...  .....+||.+|.+ .|||+++++..+.+++|||+.||+|+
T Consensus       228 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SDH~pF~~-~GIP~~~~~~~~~~~~yHt~~Dt~d~  306 (329)
T d2afwa1         228 FFPNSARWFERLQAIEHELHELGLLKDHSLEGRYFQNYSYGGVIQDDHIPFLR-RGVPVLHLIPSPFPEVWHTMDDNEEN  306 (329)
T ss_dssp             CCGGGHHHHHHHHHHHHHHHHTTCSSSCCSTTCSBCSCCCCSCCCSTTHHHHT-TTCCEEEECCSSCCTTTTSTTCSSTT
T ss_pred             EECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH-CCCCEEEEECCCCCCCCCCCCCCHHH
T ss_conf             61564117677999999999863111566556655556679988782699997-89988999768897878997476035


Q ss_pred             CCHHHHHHHHHHHHHHHHHH
Q ss_conf             99879999999999999999
Q 002613          318 LKPGSLQHLGENMLAFLLQA  337 (900)
Q Consensus       318 i~~~slq~~g~~~l~lv~~l  337 (900)
                      |++++++++++.+.+++.+.
T Consensus       307 ld~~~l~~v~~~l~~~v~ey  326 (329)
T d2afwa1         307 LDESTIDNLNKILQVFVLEY  326 (329)
T ss_dssp             CCHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999998


No 2  
>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]}
Probab=100.00  E-value=5.7e-34  Score=258.44  Aligned_cols=222  Identities=18%  Similarity=0.244  Sum_probs=177.3

Q ss_pred             CCCCHHHHHHHHHHHHH-----CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf             99999999999999882-----6999999988999999999999951101478401899966235786323345445620
Q 002613           82 RGFSEFEAIKHVKALTE-----LGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRT  156 (900)
Q Consensus        82 ~~fs~erA~~~L~~Lt~-----igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~v~vd~~~~~~g~~~~~gg~~~~~~  156 (900)
                      ++++.+++++||.+|..     .|+|..||++++++++||.++++++|      .++++|.|....              
T Consensus         2 p~i~~~~~~~~l~~l~~~~~~~~g~R~~gs~~~~~a~~yi~~~l~~~G------~~~~~~~~~~~~--------------   61 (277)
T d1tkja1           2 PDIPLANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAG------YTTTLQQFTSGG--------------   61 (277)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHT------CEEEEEEEEETT--------------
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC------CEEEEEEEECCC--------------
T ss_conf             989999999999999975357898988989999999999999999879------948997400257--------------


Q ss_pred             CCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
Q ss_conf             11145246999982788785798879998304665699998898107999999999998526999970899994699789
Q 002613          157 LIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEG  236 (900)
Q Consensus       157 ~~y~~~~NViv~i~g~~~~~~~~~~ILl~aH~DSv~~spGA~DdgsGVA~lLE~aR~L~~~~~~p~~~Iiflf~~aEE~g  236 (900)
                         .+..|||++++|+    .+++.|+++|||||++.+|||.||++|||++||++|.|++.+.+|+++|+|+|+++||.|
T Consensus        62 ---~~~~Nvi~~~~g~----~~~~~i~~~aH~D~~~~~~Ga~D~~sgva~~le~ar~l~~~~~~~~~~i~~~~~~~EE~g  134 (277)
T d1tkja1          62 ---ATGYNLIANWPGG----DPNKVLMAGAHLDSVSSGAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELG  134 (277)
T ss_dssp             ---EEEEEEEEECSCS----EEEEEEEEEEECCCCTTSCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGT
T ss_pred             ---CCCCCEEEEECCC----CCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
T ss_conf             ---6554708998887----899779997341045454344798640289999999988516787753477633544332


Q ss_pred             CCCHHHHHHC-----------------CC-C---------CHHHHHHHHHH---CCCCCCCHHHHHHHHCCCCCCCCCHH
Q ss_conf             8540899870-----------------09-9---------70479998873---28997302346532169999998447
Q 002613          237 LNGAHSFVTQ-----------------AG-P---------HPWAVENFAAA---AKYPSGQVTAQDLFASGAITSATDFQ  286 (900)
Q Consensus       237 L~GS~~fi~~-----------------~G-p---------~~~li~~y~~~---a~~P~~~~l~~~~f~~g~ips~TD~~  286 (900)
                      +.||++|+++                 .| +         .+.+.+.+.+.   ...+..      ...  .....|||.
T Consensus       135 ~~Gs~~~~~~~~~~~~~~i~~~inlD~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~SDh~  206 (277)
T d1tkja1         135 LIGSKFYVNNLPSADRSKLAGYLNFDMIGSPNPGYFVYDDDPVIEKTFKNYFAGLNVPTE------IET--EGDGRSDHA  206 (277)
T ss_dssp             SHHHHHHHHHSCHHHHTTEEEEEEECCCCCSSCCCEECCSSHHHHHHHHHHHHHHTCCCE------ECC--SSTTCSTHH
T ss_pred             CCCCHHHHHHHHCCCHHHEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCC------CCC--CCCCCCCCH
T ss_conf             345299998732130223013535454547988637853886789999999985499851------035--788886505


Q ss_pred             HHHHCCCCCEEEEEECC-------------------CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf             87422998089975428-------------------999899988994899987999999999999999972
Q 002613          287 VYKEVAGLSGLDFAYTD-------------------KSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAAS  339 (900)
Q Consensus       287 ~F~~~~gipgld~a~~~-------------------~~~~YHT~~Dt~~~i~~~slq~~g~~~l~lv~~la~  339 (900)
                      +|.+ .|||.+.+....                   ...+|||+.||+++++++.+++.++.+..++..|||
T Consensus       207 ~F~~-~GIP~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~YHt~~Dt~d~l~~~~l~~~~~~v~~~v~~LAn  277 (277)
T d1tkja1         207 PFKN-VGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLSNINDTALDRNSDAAAHAIWTLSS  277 (277)
T ss_dssp             HHHH-TTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTTSCCHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHH-CCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHC
T ss_conf             5998-7987897005875453156665305645563778889974774458999999999999999999859


No 3  
>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]}
Probab=100.00  E-value=1.1e-34  Score=263.59  Aligned_cols=234  Identities=18%  Similarity=0.223  Sum_probs=177.0

Q ss_pred             CCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99999999999999988269999999889999999999999511014784018999662357863233454456201114
Q 002613           81 KRGFSEFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYS  160 (900)
Q Consensus        81 ~~~fs~erA~~~L~~Lt~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~v~vd~~~~~~g~~~~~gg~~~~~~~~y~  160 (900)
                      ..+++++|++++++.|+++++|.++|+++.++++||++++++++.++.   +..++.+...       +          .
T Consensus        14 ~~~v~~~~i~~~l~~L~sf~~R~~~s~~~~~a~~wi~~~~~~~g~~~~---~~~~~~~~~~-------~----------~   73 (291)
T d1rtqa_          14 LPQVDASQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSASLP---NASVKQVSHS-------G----------Y   73 (291)
T ss_dssp             GGGCCHHHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHTTST---TEEEEEEEET-------T----------E
T ss_pred             HHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC---CCEEEEECCC-------C----------C
T ss_conf             976299999999999738688787986689999999999999517468---9669996578-------8----------7


Q ss_pred             CCCEEEEEECCCCCCCCCCCEEEEEEECCCCCC--------CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
Q ss_conf             524699998278878579887999830466569--------999889810799999999999852699997089999469
Q 002613          161 DLNHIVLRIQPKYASEAAENAILVSSHIDTVFA--------AEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTG  232 (900)
Q Consensus       161 ~~~NViv~i~g~~~~~~~~~~ILl~aH~DSv~~--------spGA~DdgsGVA~lLE~aR~L~~~~~~p~~~Iiflf~~a  232 (900)
                      +..|||++++|+   ..+++.|+++|||||++.        +|||.||++|||++||++|.|++.+.+|+++|+|++|++
T Consensus        74 ~~~Nvi~~~~G~---~~~~~~ivv~aH~Ds~~~~~~~~~~~~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~i~f~~~~~  150 (291)
T d1rtqa_          74 NQKSVVMTITGS---EAPDEWIVIGGHLDSTIGSHTNEQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAA  150 (291)
T ss_dssp             EEEEEEEEECCS---SEEEEEEEEEEECCCCSSTTCCTTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESC
T ss_pred             CCCCEEEEECCC---CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC
T ss_conf             765379995688---89888899973047889877677778899756346599999999999985258767458850166


Q ss_pred             CCCCCCCHHHHHHC----------------CC---C-----------CHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf             97898540899870----------------09---9-----------704799988732899730234653216999999
Q 002613          233 EEEGLNGAHSFVTQ----------------AG---P-----------HPWAVENFAAAAKYPSGQVTAQDLFASGAITSA  282 (900)
Q Consensus       233 EE~gL~GS~~fi~~----------------~G---p-----------~~~li~~y~~~a~~P~~~~l~~~~f~~g~ips~  282 (900)
                      ||.||.||++|+++                .|   .           .+.+.+.+.+... .+...+... +. ......
T Consensus       151 EE~Gl~GS~~~~~~~~~~~~~i~~~inlDmvg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~-~~~~~~  227 (291)
T d1rtqa_         151 EEVGLRGSQDLANQYKSEGKNVVSALQLDMTNYKGSAQDVVFITDYTDSNFTQYLTQLMD-EYLPSLTYG-FD-TCGYAC  227 (291)
T ss_dssp             GGGTSHHHHHHHHHHHHTTCEEEEEEECSCCSCCCSSSSEEEECTTSCHHHHHHHHHHHH-HHCTTCCEE-EE-CCSSCC
T ss_pred             CHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHH-HHCCCCCCC-CC-CCCCCC
T ss_conf             114305708998732222001344434320366898752899778775668999999999-736556756-66-788888


Q ss_pred             CCHHHHHHCCCCCEEEEEE---CCCCCCCCCCCCCCCCCCHH--HHHHHHHHHHHHHHHHHCCC
Q ss_conf             8447874229980899754---28999899988994899987--99999999999999997299
Q 002613          283 TDFQVYKEVAGLSGLDFAY---TDKSAVYHTKNDKLDLLKPG--SLQHLGENMLAFLLQAASST  341 (900)
Q Consensus       283 TD~~~F~~~~gipgld~a~---~~~~~~YHT~~Dt~~~i~~~--slq~~g~~~l~lv~~la~s~  341 (900)
                      |||.+|.+ .|||++.+.-   .+..++|||..||+|++|+.  .+.+.++.+++++.+|++++
T Consensus       228 SDh~~F~~-~GiPav~~~~~~~~~~~~~yHT~~Dt~d~id~~~~~~~~~~~l~~a~~~ela~a~  290 (291)
T d1rtqa_         228 SDHASWHN-AGYPAAMPFESKFNDYNPRIHTTQDTLANSDPTGSHAKKFTQLGLAYAIEMGSAT  290 (291)
T ss_dssp             STHHHHHH-TTCCEECEESSCGGGSCTTTTSTTCCGGGSCTTCHHHHHHHHHHHHHHHHHHHCC
T ss_pred             CCCHHHHH-CCCCEEEEECCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             74265997-8987798435777778788999635526469708999999999999999997644


No 4  
>d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6e-34  Score=258.27  Aligned_cols=236  Identities=18%  Similarity=0.274  Sum_probs=179.4

Q ss_pred             CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             99999999999999882699999998899999999999995110147840189996623578632334544562011145
Q 002613           82 RGFSEFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSD  161 (900)
Q Consensus        82 ~~fs~erA~~~L~~Lt~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~v~vd~~~~~~g~~~~~gg~~~~~~~~y~~  161 (900)
                      +++++|+++++++.++++ ||..||+++.++++||++++++++.+.     .+...+..               ...+..
T Consensus         7 ~e~~~~~~~~~l~~~~~~-p~~~gs~~~~~~~~~i~~~~~~~g~~~-----~~~~~~~~---------------~~~~~~   65 (304)
T d3bi1a3           7 DELKAENIKKFLYNFTQI-PHLAGTEQNFQLAKQIQSQWKEFGLDS-----VELAHYDV---------------LLEVTR   65 (304)
T ss_dssp             HHCCHHHHHHHHHHHSSS-CCCTTSHHHHHHHHHHHHHHHHHTCSE-----EEEEEEEE---------------EEEEEE
T ss_pred             HHHCHHHHHHHHHHHCCC-CCCCCCHHHHHHHHHHHHHHHHHCCCC-----EEEEEEEC---------------CCCCCE
T ss_conf             774888899999975259-876899889999999999999837862-----01111001---------------247640


Q ss_pred             CCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH---CCCCCCCCEEEEEECCCCCCCC
Q ss_conf             2469999827887857988799983046656999988981079999999999985---2699997089999469978985
Q 002613          162 LNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQ---WAHGFKNAVIFLFNTGEEEGLN  238 (900)
Q Consensus       162 ~~NViv~i~g~~~~~~~~~~ILl~aH~DSv~~spGA~DdgsGVA~lLE~aR~L~~---~~~~p~~~Iiflf~~aEE~gL~  238 (900)
                      +.|||++|+|+   +.++++|+++||||||  ++||+||++|+|++||++|+|.+   .+.+|+|+|+|++|++||.|+.
T Consensus        66 ~~Nvi~~i~G~---~~~~~~ii~~aH~Ds~--~~Ga~D~~sG~a~lle~ar~l~~~~~~~~~p~~ti~f~~~~~EE~gl~  140 (304)
T d3bi1a3          66 IYNVIGTLRGA---VEPDRYVILGGHRDSW--VFGGIDPQSGAAVVHEIVRSFGTLKKEGWRPRRTILFASWDAEEFGLL  140 (304)
T ss_dssp             EEEEEEEECCS---SEEEEEEEEEEECCCS--SCCTTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESSGGGTSH
T ss_pred             EEEEEEEEECC---CCCCCEEEEEECCCCC--CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCC
T ss_conf             37899999788---8887379998144556--677787861157999999999998873578875189998577025662


Q ss_pred             CHHHHHHC-------------------CCC-------CHH---HHHHHHHHCCCCCCCHH----HHH------------H
Q ss_conf             40899870-------------------099-------704---79998873289973023----465------------3
Q 002613          239 GAHSFVTQ-------------------AGP-------HPW---AVENFAAAAKYPSGQVT----AQD------------L  273 (900)
Q Consensus       239 GS~~fi~~-------------------~Gp-------~~~---li~~y~~~a~~P~~~~l----~~~------------~  273 (900)
                      ||++|+++                   .|.       .+.   ++....+...+|.....    .+.            .
T Consensus       141 Gs~~~~~~~~~~~~~~~va~in~d~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~s~~~~~~~~~~~~~~~~~  220 (304)
T d3bi1a3         141 GSTEWAEENSRLLQERGVAYINADSSIEGNYTLRVDCTPLMYSLVHNLTKELKSPDEGFEGKSLYESWTKKSPSPEFSGM  220 (304)
T ss_dssp             HHHHHHHHHHHHHHHHEEEEEECSCSBSCSSEEEEEECGGGHHHHHHHHHTSBCCSTTCTTSBHHHHHHHHSBCSSSTTC
T ss_pred             CHHHHHHHCHHHHHHCEEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCC
T ss_conf             56999986834554270788842356668875224347768999999997468975443300388988763665333566


Q ss_pred             HHCCCCCCCCCHHHHHHCCCCCEEEEEECCCC--------CCCCCCCCCCCCCC----H--HHHHHHHHHHHHHHHHHHC
Q ss_conf             21699999984478742299808997542899--------98999889948999----8--7999999999999999972
Q 002613          274 FASGAITSATDFQVYKEVAGLSGLDFAYTDKS--------AVYHTKNDKLDLLK----P--GSLQHLGENMLAFLLQAAS  339 (900)
Q Consensus       274 f~~g~ips~TD~~~F~~~~gipgld~a~~~~~--------~~YHT~~Dt~~~i~----~--~slq~~g~~~l~lv~~la~  339 (900)
                      .+.+....++|+.+|.+..|||++++++..+.        ++|||++||+++++    |  ..++.+++.+..++.+||+
T Consensus       221 ~~~~~~~~~sD~~~f~~~~GIP~v~~~~~~~~~~~~~~~~p~YHT~~DT~d~v~~~~DP~f~~~~~~a~~~~~~~~~LA~  300 (304)
T d3bi1a3         221 PRISKLGSGNDFEVFFQRLGIASGRARYTKNWETNKFSGYPLYHSVYETYELVEKFYDPMFKYHLTVAQVRGGMVFELAN  300 (304)
T ss_dssp             BCCBCCCSSSTHHHHHHTTCCEEEEEEEECCSSSCCSCSCTTTTSTTCCHHHHHHHTCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf             53357888996288898559843654430476777776888889962669999753695369999999999999999808


Q ss_pred             CCCC
Q ss_conf             9999
Q 002613          340 STSL  343 (900)
Q Consensus       340 s~~l  343 (900)
                      ++.|
T Consensus       301 ~pvL  304 (304)
T d3bi1a3         301 SIVL  304 (304)
T ss_dssp             CSSC
T ss_pred             CCCC
T ss_conf             7519


No 5  
>d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.3e-33  Score=254.10  Aligned_cols=233  Identities=17%  Similarity=0.168  Sum_probs=176.7

Q ss_pred             CCHHHHHHHHHHHHH--CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             999999999999882--699999998899999999999995110147840189996623578632334544562011145
Q 002613           84 FSEFEAIKHVKALTE--LGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSD  161 (900)
Q Consensus        84 fs~erA~~~L~~Lt~--igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~v~vd~~~~~~g~~~~~gg~~~~~~~~y~~  161 (900)
                      ++..+...+++.|++  +.||..||.+++++++||.++++++|.      +...+..+.                ....+
T Consensus        14 i~~~~~~~~i~~l~~~~~~~R~~gs~~~~~~~~~i~~~~~~~g~------~~~~~~~~~----------------~~~~~   71 (294)
T d1de4c3          14 LDSTDFTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKL------SKVWRDQHF----------------VKEIK   71 (294)
T ss_dssp             HHTCCHHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHTTC------SEEEEEEEE----------------EEEEE
T ss_pred             CCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC------CCCCCCCCC----------------CCCCC
T ss_conf             39698999999973478789789998999999999999998399------734465632----------------05776


Q ss_pred             CCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH----CCCCCCCCEEEEEECCCCCCC
Q ss_conf             2469999827887857988799983046656999988981079999999999985----269999708999946997898
Q 002613          162 LNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQ----WAHGFKNAVIFLFNTGEEEGL  237 (900)
Q Consensus       162 ~~NViv~i~g~~~~~~~~~~ILl~aH~DSv~~spGA~DdgsGVA~lLE~aR~L~~----~~~~p~~~Iiflf~~aEE~gL  237 (900)
                      ..|||++|+|+   +.++++|+++|||||+  ++||+||++|||++||++|.|++    .+++|+|+|+|++|+|||.|+
T Consensus        72 ~~Nvig~i~G~---~~~~~~ivigaH~Ds~--~~GA~DnasG~a~llelar~l~~~~~~~g~~P~rtI~f~~~~~EE~Gl  146 (294)
T d1de4c3          72 ILNIFGVIKGF---VEPDHYVVVGAQRDAW--GPGAAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAGDFGS  146 (294)
T ss_dssp             EEEEEEEECCS---SEEEEEEEEEEECCCS--SCCTTTTHHHHHHHHHHHHHHHHHHHSSCCCCSEEEEEEEECCCTTTS
T ss_pred             CCEEEEEEECC---CCCCCEEEEEEECCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCC
T ss_conf             65389998688---8987459998211201--456668851199999999999740322279877538999956853335


Q ss_pred             CCHHHHHHC-------------------CCC-------CHHH---HHHHHHHCCCCCCCHHHH----HHHHCCCCCCCCC
Q ss_conf             540899870-------------------099-------7047---999887328997302346----5321699999984
Q 002613          238 NGAHSFVTQ-------------------AGP-------HPWA---VENFAAAAKYPSGQVTAQ----DLFASGAITSATD  284 (900)
Q Consensus       238 ~GS~~fi~~-------------------~Gp-------~~~l---i~~y~~~a~~P~~~~l~~----~~f~~g~ips~TD  284 (900)
                      .||++|+++                   .|.       .|.+   ++...+..++|.......    ...+....+.++|
T Consensus       147 ~GS~~~~~~~~~~l~~~~~a~iNlD~~~~g~~~~~~~~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~sD  226 (294)
T d1de4c3         147 VGATEWLEGYLSSLHLKAFTYINLDKAVLGTSNFKVSASPLLYTLIEKTMQNVKHPVTGQFLYQDSNWASKVEKLTLDNA  226 (294)
T ss_dssp             HHHHHHHHHSHHHHTTTEEEEEECTTCBSCSSEEEEEECGGGHHHHHHHHHHSBCTTTCSBSCCCTTGGGGCCCCCTTST
T ss_pred             CCHHHHHHHCHHHHCCCEEEEEECCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCC
T ss_conf             57899998473440006689983266767888773323766999999999863785446544512575333567788987


Q ss_pred             HHHHHHCCCCCEEEEEECCCC--CCCCCCCCCCCCCCH------HHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             478742299808997542899--989998899489998------79999999999999999729999
Q 002613          285 FQVYKEVAGLSGLDFAYTDKS--AVYHTKNDKLDLLKP------GSLQHLGENMLAFLLQAASSTSL  343 (900)
Q Consensus       285 ~~~F~~~~gipgld~a~~~~~--~~YHT~~Dt~~~i~~------~slq~~g~~~l~lv~~la~s~~l  343 (900)
                      +.+|.++.|||++++.+..+.  ++|||.+||+++++.      ...+.+++.+..++++||++++|
T Consensus       227 ~~pF~~~~GIP~i~~~~~~~~~~~~yHt~~DT~~~l~~~~~~~~~~~~a~A~v~~~l~~~LAn~~~l  293 (294)
T d1de4c3         227 AFPFLAYSGIPAVSFCFCEDTDYPYLGTTMDTYKELIERIPELNKVARAAAEVAGQFVIKLTHDVEL  293 (294)
T ss_dssp             HHHHHHTTCCCEEEEEEECSSCCTTTTSTTCSHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHSSSSC
T ss_pred             CHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             5667873897058733268889999998501489998735838899999999999999998374204


No 6  
>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.78  E-value=9.3e-18  Score=141.54  Aligned_cols=198  Identities=15%  Similarity=0.208  Sum_probs=138.8

Q ss_pred             HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf             99999998826999999988999999999999951101478401899966235786323345445620111452469999
Q 002613           89 AIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVLR  168 (900)
Q Consensus        89 A~~~L~~Lt~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~v~vd~~~~~~g~~~~~gg~~~~~~~~y~~~~NViv~  168 (900)
                      ..+.|++|.++ |.+.|.+  +++++||.+++++++      .++++                        ++..||+++
T Consensus         3 ~~~~l~~l~~~-~~~sg~E--~~v~~~i~~~l~~~~------~~~~~------------------------d~~gNvia~   49 (248)
T d1vhoa2           3 TGKLLMELSNL-DGPSGYE--TNVVSYIKSVIEPFV------DEAKT------------------------TRHGSLIGY   49 (248)
T ss_dssp             HHHHHHHHHHS-CCBTTCC--HHHHHHHHHHHGGGC------SEEEE------------------------CTTSCEEEE
T ss_pred             HHHHHHHHHCC-CCCCCCH--HHHHHHHHHHHHHCC------CEEEE------------------------ECCCCEEEE
T ss_conf             79999999669-9999878--999999999999719------97999------------------------158968999


Q ss_pred             ECCCCCCCCCCCEEEEEEECCCCCCCCC----------CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC
Q ss_conf             8278878579887999830466569999----------889810799999999999852699997089999469978985
Q 002613          169 IQPKYASEAAENAILVSSHIDTVFAAEG----------AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLN  238 (900)
Q Consensus       169 i~g~~~~~~~~~~ILl~aH~DSv~~spG----------A~DdgsGVA~lLE~aR~L~~~~~~p~~~Iiflf~~aEE~gL~  238 (900)
                      ++|+     .++.|+++||+|++...++          |.||++||+++||++|.+..  .+++++|.|+|+.+||.|+.
T Consensus        50 ~~g~-----~~~~i~l~aH~D~v~~~~~~~~~~~~~~~a~Dd~~G~a~~l~~~~~l~~--~~~~~~v~~~~~~~EE~G~~  122 (248)
T d1vhoa2          50 KKGK-----GIGKLAFFAHVDEIIDQTAFETNGKVVGKALDNRASCGVLVKVLEFLKR--YDHPWDVYVVFSVQEETGCL  122 (248)
T ss_dssp             ECCS-----SSCEEEEEEECCBCECCCCEEETTEEEETTHHHHHHHHHHHHHHHHHTT--CCCSSEEEEEEECTTSSSHH
T ss_pred             ECCC-----CCCEEEEECCCCCEECCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHH--CCCCCCEEEEEEECCCCCCC
T ss_conf             6277-----7732787301112103566324770411577640738999999999731--37777449998631557887


Q ss_pred             CHHHHHHCCC--------------------------C--------CHHHHHHHH---HHCCCCCCCHHHHHHHHCCCCCC
Q ss_conf             4089987009--------------------------9--------704799988---73289973023465321699999
Q 002613          239 GAHSFVTQAG--------------------------P--------HPWAVENFA---AAAKYPSGQVTAQDLFASGAITS  281 (900)
Q Consensus       239 GS~~fi~~~G--------------------------p--------~~~li~~y~---~~a~~P~~~~l~~~~f~~g~ips  281 (900)
                      ||+.+...-.                          +        ++.+.+.+.   +....|+..    +.+. +.-..
T Consensus       123 Ga~~~~~~~~~~~~~~~d~~~~~d~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~a~~~~i~~~~----~~~~-~~~g~  197 (248)
T d1vhoa2         123 GALTGAYEINPDAAIVMDVTFASEPPFSDHIELGKGPVIGLGPVVDRNLVQKIIEIAKKHNVSLQE----EAVG-GRSGT  197 (248)
T ss_dssp             HHHHTTCCCCCSEEEEEEEECCCCTTSCCCCCTTSCCEEECSTTSCHHHHHHHHHHHHHTTCCCEE----ESSC-CC---
T ss_pred             CCEEHHHCCCCCCCCEECEECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEE----EEEE-CCCCC
T ss_conf             611110013321000000011446788763124633587226658989999999999860776403----5640-68988


Q ss_pred             CCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             98447874229980899754289998999889948999879999999999999999
Q 002613          282 ATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQA  337 (900)
Q Consensus       282 ~TD~~~F~~~~gipgld~a~~~~~~~YHT~~Dt~~~i~~~slq~~g~~~l~lv~~l  337 (900)
                      ++|+..|.+ .|||.++++.-  ..++||+.|+.   +...+.++.+.+.+++.+|
T Consensus       198 d~d~~~~~~-~Gip~~~i~~p--~~y~Hs~~E~~---~~~D~~~~~~ll~~~i~~l  247 (248)
T d1vhoa2         198 ETDFVQLVR-NGVRTSLISIP--LKYMHTPVEMV---DPRDVEELARLLSLVAVEL  247 (248)
T ss_dssp             -CTTHHHHH-TTCEEEEEEEE--CBSTTSTTEEE---CHHHHHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHC-CCCCEEEECCC--CCCCCCCCEEE---EHHHHHHHHHHHHHHHHHC
T ss_conf             679999846-89978996757--35687832145---0999999999999999853


No 7  
>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]}
Probab=99.78  E-value=1.9e-18  Score=146.48  Aligned_cols=195  Identities=16%  Similarity=0.243  Sum_probs=139.0

Q ss_pred             HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf             99999988269999999889999999999999511014784018999662357863233454456201114524699998
Q 002613           90 IKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVLRI  169 (900)
Q Consensus        90 ~~~L~~Lt~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~v~vd~~~~~~g~~~~~gg~~~~~~~~y~~~~NViv~i  169 (900)
                      .+.|++|.++ |-+.|.  +.++++|+.+++++++      .+++.|                        +..||++++
T Consensus         3 ~~ll~~l~~~-~s~sg~--E~~~~~~~~~~l~~~~------~~v~~D------------------------~~gNi~~~~   49 (264)
T d1yloa2           3 LSLLKALSEA-DAIASS--EQEVRQILLEEAARLQ------KEVRFD------------------------GLGSVLIRL   49 (264)
T ss_dssp             HHHHHHHHHS-CCBTTB--CHHHHHHHHHHHHHTT------CCEEEC------------------------TTCCEEEEC
T ss_pred             HHHHHHHHCC-CCCCCC--HHHHHHHHHHHHHHCC------CEEEEC------------------------CCCCEEEEE
T ss_conf             8999999739-998958--8999999999999649------989993------------------------898589998


Q ss_pred             CCCCCCCCCCCEEEEEEECCCCCCCC-----------CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC
Q ss_conf             27887857988799983046656999-----------9889810799999999999852699997089999469978985
Q 002613          170 QPKYASEAAENAILVSSHIDTVFAAE-----------GAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLN  238 (900)
Q Consensus       170 ~g~~~~~~~~~~ILl~aH~DSv~~sp-----------GA~DdgsGVA~lLE~aR~L~~~~~~p~~~Iiflf~~aEE~gL~  238 (900)
                      .|.     +++.++++||+|++....           +|.||++||+++||++|.+.+  .++++++.|+|+.+||.|+.
T Consensus        50 ~~~-----~~~~v~~~~H~D~~~~~~~~~~~~~~i~g~a~D~~~gva~lle~~r~l~~--~~~~~~v~~~~~~~EE~G~~  122 (264)
T d1yloa2          50 NES-----TGPKVMICAHMDEVFDTTFQVLPHQRVMGKAFDDRLSCYLLVTLLRELHD--AELPAEVWLVASSSEEVGLR  122 (264)
T ss_dssp             CCC-----SSCEEEEEEECCCCECCCCEEETTTEEEETTHHHHHHHHHHHHHHHHHTT--CCCSSEEEEEEESCCTTSSH
T ss_pred             CCC-----CCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHC--CCCCCEEEEEEEECCCCCCC
T ss_conf             998-----87169996576754332320115643326654463019999999999854--78986199999854666777


Q ss_pred             CHHHHHHCC-------------CC---------------------------CHHHHHHHHHHCCCCCCCHHHHHH---HH
Q ss_conf             408998700-------------99---------------------------704799988732899730234653---21
Q 002613          239 GAHSFVTQA-------------GP---------------------------HPWAVENFAAAAKYPSGQVTAQDL---FA  275 (900)
Q Consensus       239 GS~~fi~~~-------------Gp---------------------------~~~li~~y~~~a~~P~~~~l~~~~---f~  275 (900)
                      ||+.+..+.             +.                           ++.+.+...+         .+++.   +|
T Consensus       123 Ga~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---------~a~~~~i~~q  193 (264)
T d1yloa2         123 GGQTATRAVSPDVAIVLDTACWAKNFDYGAANHRQIGNGPMLVLSDKSLIAPPKLTAWIET---------VAAEIGVPLQ  193 (264)
T ss_dssp             HHHHHHHHHCCSEEEEECCCCCSSTTCCSTTCCCCTTSCCEEEEECSSCBCCHHHHHHHHH---------HHHHHTCCCE
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH---------HHHHCCCCCE
T ss_conf             7522000122231100002224678888743323335663688605332148999999987---------6662178742


Q ss_pred             CCC---CCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf             699---9999844787422998089975428999899988994899987999999999999999972
Q 002613          276 SGA---ITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAAS  339 (900)
Q Consensus       276 ~g~---ips~TD~~~F~~~~gipgld~a~~~~~~~YHT~~Dt~~~i~~~slq~~g~~~l~lv~~la~  339 (900)
                      ...   -.+++|+..|.+ .|||.++++.  +..++||+.|+.+   ...++++.+.+.+++.++.+
T Consensus       194 ~~~~~~~g~d~d~~~~~~-~GIp~~~i~~--p~~y~Hs~~e~~~---~~D~~~~~~l~~~~i~~ld~  254 (264)
T d1yloa2         194 ADMFSNGGTDGGAVHLTG-TGVPTLVMGP--ATRHGHCAASIAD---CRDILQMEQLLSALIQRLTR  254 (264)
T ss_dssp             EEECSSCCCHHHHHHTST-TCCCEEEEEC--CCBSCSSSCEEEE---HHHHHHHHHHHHHHHHTCCH
T ss_pred             EEECCCCCCCCHHHHHHC-CCCCEEEECC--CCCCCCCHHHHCC---HHHHHHHHHHHHHHHHHCCH
T ss_conf             762378887731899836-8998899795--7456677023306---99999999999999997189


No 8  
>g1q7l.1 c.56.5.4 (A:,B:) Aminoacylase-1, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77  E-value=1.7e-17  Score=139.57  Aligned_cols=225  Identities=20%  Similarity=0.270  Sum_probs=157.0

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf             99999999998826999999988999999999999951101478401899966235786323345445620111452469
Q 002613           86 EFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHI  165 (900)
Q Consensus        86 ~erA~~~L~~Lt~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~v~vd~~~~~~g~~~~~gg~~~~~~~~y~~~~NV  165 (900)
                      +.++.+.|++|.+| |-...+.++.++.+||.++++++|      .+++.....                    ....|+
T Consensus         3 e~~~v~~l~ellrI-pSvsp~~~~~~~~~~l~~~l~~~G------~~~~~~~~~--------------------~g~~~v   55 (280)
T g1q7l.1           3 EHPSVTLFRQYLRI-RTVQPKPDYGAAVAFFEETARQLG------LGCQKVEVA--------------------PGYVVT   55 (280)
T ss_dssp             CCHHHHHHHHHHTS-CCBTTSCCHHHHHHHHHHHHHHHT------CEEEEEEEE--------------------TTEEEE
T ss_pred             CHHHHHHHHHHHCC-CCCCCCCCHHHHHHHHHHHHHHCC------CEEEEEECC--------------------CCCEEE
T ss_conf             06999999999588-999959489999999999999879------928999717--------------------997489


Q ss_pred             EEEECCCCCCCCCCCEEEEEEECCCCCC---------------------CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             9998278878579887999830466569---------------------9998898107999999999998526999970
Q 002613          166 VLRIQPKYASEAAENAILVSSHIDTVFA---------------------AEGAGDCSSCVAVMLELARAMSQWAHGFKNA  224 (900)
Q Consensus       166 iv~i~g~~~~~~~~~~ILl~aH~DSv~~---------------------spGA~DdgsGVA~lLE~aR~L~~~~~~p~~~  224 (900)
                      +++++|.   +...+.|++.+|+|+|+.                     +.||.||+.+++++++++|.|.+.+.+++++
T Consensus        56 ~~~~~g~---~~~~~~ill~~H~DvvP~~~~~W~~~Pf~~~~~~dg~iyGRGa~D~K~~~~~~l~a~~~l~~~~~~~~~~  132 (280)
T g1q7l.1          56 VLTWPGT---NPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRFPRT  132 (280)
T ss_dssp             EEEECCS---STTSCEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSC
T ss_pred             EEEEECC---CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             9997368---9888869999444532357642122333441112342125665555403789999999999808988873


Q ss_pred             EEEEEECCCCC-CCCCHHHHHHC-------------CC-CCH--H-HHHHHHHHC-----CCCCCC---HHHHHH---HH
Q ss_conf             89999469978-98540899870-------------09-970--4-799988732-----899730---234653---21
Q 002613          225 VIFLFNTGEEE-GLNGAHSFVTQ-------------AG-PHP--W-AVENFAAAA-----KYPSGQ---VTAQDL---FA  275 (900)
Q Consensus       225 Iiflf~~aEE~-gL~GS~~fi~~-------------~G-p~~--~-li~~y~~~a-----~~P~~~---~l~~~~---f~  275 (900)
                      |.|+|..+||. |..|++.++++             .| .+|  . .+ .+....     -.+.+.   ....+.   +.
T Consensus       133 i~~~~~~dEE~gg~~g~~~~~~~~~~~~~~~~~~ld~g~~~p~~~~~i-~~~~rG~~~~~v~~~g~~~~~~~~~~~~~~~  211 (280)
T g1q7l.1         133 IHMTFVPDEEVGGHQGMELFVQRPEFHALRAGFALDEGIANPTDAFTV-FYSERSPWWVRVNPWWAAFSRVCKDMNLTLE  211 (280)
T ss_dssp             EEEEEESCGGGTSTTTHHHHTTSHHHHTTCEEEEEECCCCCSSSSEEE-EECCSSCGGGCCCHHHHHHHHHHHHTTCCEE
T ss_pred             EEEEEECCCCCCCHHHHHHHHHCHHHCCCCEEEEEECCCCCCCCCCEE-EEECCEEEEEEEEECCCCHHHHHHHHHHCEE
T ss_conf             399996772117364699998477762898669997885689987508-9967748999999543342555542221044


Q ss_pred             CCCCCCCCCHHHHHHCCCCCEEEEEECCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             69999998447874229980899754289998-99988994899987999999999999999972999999
Q 002613          276 SGAITSATDFQVYKEVAGLSGLDFAYTDKSAV-YHTKNDKLDLLKPGSLQHLGENMLAFLLQAASSTSLPK  345 (900)
Q Consensus       276 ~g~ips~TD~~~F~~~~gipgld~a~~~~~~~-YHT~~Dt~~~i~~~slq~~g~~~l~lv~~la~s~~l~~  345 (900)
                      ..+.|++||++.++. .|+|++.|....+... .|   |.-++|....+.+-.+....+++.+++-+.||.
T Consensus       212 ~~i~p~~tD~~~~~~-~GiPa~~fsp~~~~~~~lh---d~~~~i~~~~fyd~v~~~~~~i~~la~~p~l~~  278 (280)
T g1q7l.1         212 PEIMPAAGDNRYIRA-VGVPALGFSPMNRTPVLLH---DHDERLHEAVFLRGVDIYTRLLPALASVPALPS  278 (280)
T ss_dssp             EEECCSCSHHHHHHH-TTCCEEEECCCCSCCCCTT---STTCEEEHHHHHHHHHHHHHHHHHHHTCCCCGG
T ss_pred             EEECCCCCCCCEECC-CCCCCCCCCHHHHCHHHHC---CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf             434268997523442-1665445785440422310---776767564200021879999999737999988


No 9  
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]}
Probab=99.77  E-value=7.1e-18  Score=142.38  Aligned_cols=127  Identities=16%  Similarity=0.092  Sum_probs=111.2

Q ss_pred             HHHHHHHHHHHHHCCC-------CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             9999999999882699-------999998899999999999995110147840189996623578632334544562011
Q 002613           86 EFEAIKHVKALTELGP-------HPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLI  158 (900)
Q Consensus        86 ~erA~~~L~~Lt~igp-------r~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~v~vd~~~~~~g~~~~~gg~~~~~~~~  158 (900)
                      .+|.++.|.+|++||.       |...|+++.++++|+.++++++|      .++++|                      
T Consensus         5 ~~~l~~~l~~l~~~g~~~~gGvtR~~~s~~~~~a~~~l~~~~~~~G------l~v~~D----------------------   56 (293)
T d1z2la1           5 RQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASG------LETRFD----------------------   56 (293)
T ss_dssp             HHHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTT------CEEEEC----------------------
T ss_pred             HHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCC------CEEEEE----------------------
T ss_conf             9999999999985189999972435289999999999999999859------979980----------------------


Q ss_pred             CCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC---
Q ss_conf             14524699998278878579887999830466569999889810799999999999852699997089999469978---
Q 002613          159 YSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEE---  235 (900)
Q Consensus       159 y~~~~NViv~i~g~~~~~~~~~~ILl~aH~DSv~~spGA~DdgsGVA~lLE~aR~L~~~~~~p~~~Iiflf~~aEE~---  235 (900)
                        .+.||+++++|+   +.+.+.|+++||+|||+.+ |+.|++.||++.||++|.+.+.+.+|+++|.++.|.+||.   
T Consensus        57 --~~GNvig~~~G~---~~~~~~v~iGSHlDtV~~g-G~~Dg~~Gv~a~le~~~~l~~~~~~~~~~i~vv~f~~EEg~rF  130 (293)
T d1z2la1          57 --EVGNLYGRLNGT---EYPQEVVLSGSHIDTVVNG-GNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRF  130 (293)
T ss_dssp             --TTSCEEEEECCS---SEEEEEEEEEEECCCCTTB-CSSTTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCSS
T ss_pred             --CCCCEEEEEECC---CCCCCEEEEEEECCCCCCC-CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC
T ss_conf             --688689999624---7877626862202658988-8878740279999998778760887899961122114645633


Q ss_pred             --CCCCHHHHHHC
Q ss_conf             --98540899870
Q 002613          236 --GLNGAHSFVTQ  246 (900)
Q Consensus       236 --gL~GS~~fi~~  246 (900)
                        +++||+++..+
T Consensus       131 g~~~~GS~~~~G~  143 (293)
T d1z2la1         131 PYVFWGSKNIFGL  143 (293)
T ss_dssp             SCSCHHHHHHTTC
T ss_pred             CCCCCCCHHHCCC
T ss_conf             7553420232277


No 10 
>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]}
Probab=99.75  E-value=1.1e-16  Score=133.91  Aligned_cols=214  Identities=17%  Similarity=0.206  Sum_probs=140.7

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCHHH-HHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf             999999999988269999999889-9999999999995110147840189996623578632334544562011145246
Q 002613           86 EFEAIKHVKALTELGPHPVGSDAL-DRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNH  164 (900)
Q Consensus        86 ~erA~~~L~~Lt~igpr~~GS~~~-~~a~~yL~~~l~~ig~~~~~~~~v~vd~~~~~~g~~~~~gg~~~~~~~~y~~~~N  164 (900)
                      .+++.+.|++|.+| |-+.+.++. .++.+|+.++++++|      .+++...  ..       +         .....|
T Consensus        15 ~~~~i~~L~~lv~i-~S~s~~~~~~~~~a~~l~~~l~~lG------~~~~~~~--~~-------~---------~~~~~n   69 (276)
T d1cg2a1          15 QPAVIKTLEKLVNI-ETGTGDAEGIAAAGNFLEAELKNLG------FTVTRSK--SA-------G---------LVVGDN   69 (276)
T ss_dssp             HHHHHHHHHHHHTS-CCBTTCHHHHHHHHHHHHHHHHHTT------CEEEEEE--CS-------T---------TCCSEE
T ss_pred             HHHHHHHHHHHHCC-CCCCCCHHHHHHHHHHHHHHHHHCC------CEEEEEE--CC-------C---------CCCCCE
T ss_conf             99999999999679-9989798999999999999999779------9599994--58-------9---------776787


Q ss_pred             EEEEECCCCCCCCCCCEEEEEEECCCCCC-----------------CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEE
Q ss_conf             99998278878579887999830466569-----------------9998898107999999999998526999970899
Q 002613          165 IVLRIQPKYASEAAENAILVSSHIDTVFA-----------------AEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIF  227 (900)
Q Consensus       165 Viv~i~g~~~~~~~~~~ILl~aH~DSv~~-----------------spGA~DdgsGVA~lLE~aR~L~~~~~~p~~~Iif  227 (900)
                      ++++++|+     .++.|++++|+|+|+.                 ++|+.||++|++++|+++|.+.+.+.+++++|.|
T Consensus        70 v~a~~~g~-----~~~~vll~~H~DtV~~~~~w~~~Pf~~~~~~l~G~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~  144 (276)
T d1cg2a1          70 IVGKIKGR-----GGKNLLLMSHMDTVYLKGILAKAPFRVEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITV  144 (276)
T ss_dssp             EEEEEECS-----SCCCEEEEEECCBSCCTTHHHHSCCEEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEE
T ss_pred             EEEEECCC-----CCCEEEEEECCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEE
T ss_conf             99998899-----9984999806242233554677862353680341231355554999999999999708777888799


Q ss_pred             EEECCCCCCCCCHHHHHHCCC----------C----C-----------HHHHHHHHHHCCCCCCCHHHHHHHH----CCC
Q ss_conf             994699789854089987009----------9----7-----------0479998873289973023465321----699
Q 002613          228 LFNTGEEEGLNGAHSFVTQAG----------P----H-----------PWAVENFAAAAKYPSGQVTAQDLFA----SGA  278 (900)
Q Consensus       228 lf~~aEE~gL~GS~~fi~~~G----------p----~-----------~~li~~y~~~a~~P~~~~l~~~~f~----~g~  278 (900)
                      +|+++||.|+.||+.++++.+          |    +           .+......+..      ....+.-.    ...
T Consensus       145 ~~~~~EE~g~~g~~~~~~~~~~~~d~~i~~Ept~~g~~~~~~g~~~~~~~~~~~~~~~~------a~~~~~~~~~~~~~~  218 (276)
T d1cg2a1         145 LFNTDEEKGSFGSRDLIQEEAKLADYVLSFEPTSAGDEKLSLGTFNAGEGGKKLVDKAV------AYYKEAGGTLGVEER  218 (276)
T ss_dssp             EEESCGGGTTTTTHHHHHHHHHHCSEEEECCCEETTSCEEESEEEECHHHHHHHHHHHH------HHHHHTTCCCEEESC
T ss_pred             EEECCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHH------HHHHHHCCCCCCCCC
T ss_conf             99746124652379999856526999999267888888548997246641002156665------545541442211247


Q ss_pred             CCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf             9999844787422998089975428999899988994899987999999999999999972
Q 002613          279 ITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAAS  339 (900)
Q Consensus       279 ips~TD~~~F~~~~gipgld~a~~~~~~~YHT~~Dt~~~i~~~slq~~g~~~l~lv~~la~  339 (900)
                      ..+.+|...+.. .++|.++ .+..+++.||++.+.  +++.+++......+..++.++++
T Consensus       219 ~~~g~~a~~~~~-~~~~~l~-~~g~~g~g~~~~~~e--~~~i~~v~p~l~l~~r~~~el~~  275 (276)
T d1cg2a1         219 TGGGTDAAYAAL-SGKPVIE-SLGLPGFGYHSDKAE--YVDISAIPRRLYMAARLIMDLGA  275 (276)
T ss_dssp             BSCCCTHHHHGG-GSCCEEC-CCSCEEECTTSSSCC--EEEGGGHHHHHHHHHHHHHHHHC
T ss_pred             CCCCHHHHHHHH-CCCCHHH-CCCCCCCCCCCCCCE--EEECCCCCCCHHHHHHHHHHHHC
T ss_conf             787301778986-3774433-056874464489671--88725566358999999998437


No 11 
>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]}
Probab=99.74  E-value=2e-17  Score=139.20  Aligned_cols=200  Identities=19%  Similarity=0.219  Sum_probs=142.5

Q ss_pred             HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf             99999999988269999999889999999999999511014784018999662357863233454456201114524699
Q 002613           87 FEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIV  166 (900)
Q Consensus        87 erA~~~L~~Lt~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~v~vd~~~~~~g~~~~~gg~~~~~~~~y~~~~NVi  166 (900)
                      +++.+.|++|.++ |.+.|.+  +++++||.+++++++      .++++|                        +..|++
T Consensus         3 ~~~~~~l~~l~~i-~s~sg~E--~~v~~~l~~~l~~~g------~~~~~D------------------------~~gN~i   49 (275)
T d1vhea2           3 DETLTMLKDLTDA-KGIPGNE--REVRQVMKSYIEPFA------DEVTTD------------------------RLGSLI   49 (275)
T ss_dssp             CHHHHHHHHHHHS-CCCTTCC--HHHHHHHHHHHGGGC------SEEEEC------------------------TTCCEE
T ss_pred             HHHHHHHHHHHCC-CCCCCCH--HHHHHHHHHHHHHCC------CEEEEE------------------------CCCCEE
T ss_conf             7999999999749-9989888--999999999999719------989991------------------------798689


Q ss_pred             EEECCCCCCCCCCCEEEEEEECCCCCC------------CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC
Q ss_conf             998278878579887999830466569------------99988981079999999999985269999708999946997
Q 002613          167 LRIQPKYASEAAENAILVSSHIDTVFA------------AEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEE  234 (900)
Q Consensus       167 v~i~g~~~~~~~~~~ILl~aH~DSv~~------------spGA~DdgsGVA~lLE~aR~L~~~~~~p~~~Iiflf~~aEE  234 (900)
                      ++++|+    .+.+.|+++||+|+|+.            ..|+.||++||+++||++|.+.+  .++.+++.|+|+.+||
T Consensus        50 ~~~~g~----~~~~~i~l~~H~D~v~~~~~~~~~~~~~~~~~~~Dd~~Gva~~l~~~~~l~~--~~~~~~v~~~~~~~EE  123 (275)
T d1vhea2          50 AKKTGA----ENGPKIMIAGHLDEVPHFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQN--TDHPNIVYGVGTVQEE  123 (275)
T ss_dssp             EEEESS----TTSCEEEEEEECCCCECCCCEECSSTTEEEETTHHHHHHHHHHHHHHHHHHT--SCCSSEEEEEEESCCT
T ss_pred             EEECCC----CCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHC--CCCCCEEEEEEECCCC
T ss_conf             996688----8887334622121235665336412111224766576378999999999860--8887608999741533


Q ss_pred             CCCCCHHHHHHCC-------------CC----------------------------CHHHHHHHHHH---CCCCCCCHHH
Q ss_conf             8985408998700-------------99----------------------------70479998873---2899730234
Q 002613          235 EGLNGAHSFVTQA-------------GP----------------------------HPWAVENFAAA---AKYPSGQVTA  270 (900)
Q Consensus       235 ~gL~GS~~fi~~~-------------Gp----------------------------~~~li~~y~~~---a~~P~~~~l~  270 (900)
                      .|+.|++.+..+.             +.                            +..+.+...+.   ...+      
T Consensus       124 ~G~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~i~~~a~~~~~~------  197 (275)
T d1vhea2         124 VGLRGAKTAAHTIQPDIAFGVDVGIAGDTPGISEKEAQSKMGKGPQIIVYDASMVSHKGLRDAVVATAEEAGIP------  197 (275)
T ss_dssp             TTSHHHHHHHHHHCCSEEEEEEEEECCCSTTCCTTTCCCCTTSCCEEEEEETTEECCHHHHHHHHHHHHHHTCC------
T ss_pred             CCCCCHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCC------
T ss_conf             57843434532002223210013455567876644464335774311322676657789999999888860863------


Q ss_pred             HHHHHCC-CCCCCCCHHHH--HHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             6532169-99999844787--4229980899754289998999889948999879999999999999999729
Q 002613          271 QDLFASG-AITSATDFQVY--KEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQAASS  340 (900)
Q Consensus       271 ~~~f~~g-~ips~TD~~~F--~~~~gipgld~a~~~~~~~YHT~~Dt~~~i~~~slq~~g~~~l~lv~~la~s  340 (900)
                         ++.. .....||...+  .. .|+|..+++.-  ..++||+.++.   +...+.++.+.+.+++.++...
T Consensus       198 ---~~~~~~~~~gtd~~~~~~~~-~Gi~~~~i~~~--~~~~Hs~~E~i---~~~D~~~~~~ll~~~i~~l~~~  261 (275)
T d1vhea2         198 ---YQFDAIAGGGTDSGAIHLTA-NGVPALSITIA--TRYIHTHAAML---HRDDYENAVKLITEVIKKLDRK  261 (275)
T ss_dssp             ---CEEEEETTCCCTHHHHTTST-TCCCEEEEEEE--EBSTTSSCEEE---EHHHHHHHHHHHHHHHHHCCHH
T ss_pred             ---EEEEECCCCCCHHHHHHHHC-CCCCEEEECCC--CCCCCCCCCEE---CHHHHHHHHHHHHHHHHHHCHH
T ss_conf             ---58972378887058999827-89888996866--45677854116---3999999999999999971899


No 12 
>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]}
Probab=99.68  E-value=1.3e-16  Score=133.31  Aligned_cols=190  Identities=16%  Similarity=0.220  Sum_probs=132.2

Q ss_pred             HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf             99998826999999988999999999999951101478401899966235786323345445620111452469999827
Q 002613           92 HVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVLRIQP  171 (900)
Q Consensus        92 ~L~~Lt~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~v~vd~~~~~~g~~~~~gg~~~~~~~~y~~~~NViv~i~g  171 (900)
                      +|++|.++ |.+.|.+  +++++|+.+++++++      .++++|                        +..||+++++|
T Consensus         2 ~l~~l~~i-~s~sg~E--~~v~~~~~~~l~~~g------~~v~~d------------------------~~gNii~~~~G   48 (255)
T d2fvga2           2 YLKELSMM-PGVSGDE--GKVRDFIKSKIEGLV------DNLYTD------------------------VLGNLIALKRG   48 (255)
T ss_dssp             CHHHHHHS-CCBTTCC--HHHHHHHHHHHGGGS------SEEEEC------------------------TTSCEEEEECC
T ss_pred             HHHHHHCC-CCCCCCH--HHHHHHHHHHHHHCC------CEEEEE------------------------CCCCEEEEECC
T ss_conf             68998459-9989998--999999999999729------969995------------------------79979999668


Q ss_pred             CCCCCCCCCEEEEEEECCCCCC----------CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHH
Q ss_conf             8878579887999830466569----------999889810799999999999852699997089999469978985408
Q 002613          172 KYASEAAENAILVSSHIDTVFA----------AEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAH  241 (900)
Q Consensus       172 ~~~~~~~~~~ILl~aH~DSv~~----------spGA~DdgsGVA~lLE~aR~L~~~~~~p~~~Iiflf~~aEE~gL~GS~  241 (900)
                      +    ++++.++++||+||++.          ..||.||++||+++||++|.+.    .++.++.|+|+++||.|+.|+.
T Consensus        49 ~----~~~~~i~l~aH~Dtv~~~~~~~~~~~~~~ga~Dd~~Gva~~l~~~~~~~----~~~~~i~~~~t~~EE~G~~g~~  120 (255)
T d2fvga2          49 R----DSSKKLLVSAHMDEVFVSDYIEKNGRAVGKAFDDRAGCSVLIDVLESGV----SPAYDTYFVFTVQEETGLRGSA  120 (255)
T ss_dssp             S----EEEEEEEEEEECCBCECCCCEEETTEEEESCHHHHHHHHHHHHHHHTCC----CCSEEEEEEEECCCC-----CH
T ss_pred             C----CCCCCEEEEECCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHC----CCCCCEEEEEEEECCCCCCCHH
T ss_conf             8----8898558972135444520003564345775634674999999998714----5665459999840355774232


Q ss_pred             HHHHCCC-----------------C------------------------CHHHHHHHHHH---CCCCCCCHHHHHHHHCC
Q ss_conf             9987009-----------------9------------------------70479998873---28997302346532169
Q 002613          242 SFVTQAG-----------------P------------------------HPWAVENFAAA---AKYPSGQVTAQDLFASG  277 (900)
Q Consensus       242 ~fi~~~G-----------------p------------------------~~~li~~y~~~---a~~P~~~~l~~~~f~~g  277 (900)
                      .+..+..                 .                        ++.+.+...+.   ...++         +..
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~i~~~a~~~g~~~---------~~~  191 (255)
T d2fvga2         121 VVVEQLKPTCAIVVETTTAGDNPELEERKWATHLGDGPAITFYHRGYVIPKEIFQTIVDTAKNNDIPF---------QMK  191 (255)
T ss_dssp             HHHHHHCCSEEEEEEEEEECSCSTTCCSSSSCCTTSCCEECSCCSSSCCCHHHHHHHHHHHHHTTCCC---------EEC
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCE---------EEE
T ss_conf             33345554344420134366656876443442103434300025877689999999999999719943---------698


Q ss_pred             CC---CCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             99---9998447874229980899754289998999889948999879999999999999999
Q 002613          278 AI---TSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLLQA  337 (900)
Q Consensus       278 ~i---ps~TD~~~F~~~~gipgld~a~~~~~~~YHT~~Dt~~~i~~~slq~~g~~~l~lv~~l  337 (900)
                      ..   .++++...+.. .|+|..+++.-  ..++||+.++.+   ...+.++.+.+-+++.+.
T Consensus       192 ~~~~~gtd~~~~~~~~-~Gi~t~~i~~p--~~~~Hs~~E~~~---~~D~e~~~~ll~~~v~e~  248 (255)
T d2fvga2         192 RRTAGGTDAGRYARTA-YGVPAGVISTP--ARYIHSPNSIID---LNDYENTKKLIKVLVEEG  248 (255)
T ss_dssp             CCC--------------CCSCEEEEEEE--EEESSTTCEEEE---HHHHHHHHHHHHHHHHHC
T ss_pred             ECCCCCCCHHHHHHHC-CCCCEEEECCC--CCCCCCCCEEEE---HHHHHHHHHHHHHHHHHC
T ss_conf             5068876559999847-99868997746--245757431650---999999999999999844


No 13 
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]}
Probab=99.66  E-value=3.9e-15  Score=122.68  Aligned_cols=130  Identities=16%  Similarity=0.138  Sum_probs=109.0

Q ss_pred             CCCCCHHHHHHHHHHH-HHCC--------------CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCC
Q ss_conf             9999999999999998-8269--------------999999889999999999999511014784018999662357863
Q 002613           81 KRGFSEFEAIKHVKAL-TELG--------------PHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGAN  145 (900)
Q Consensus        81 ~~~fs~erA~~~L~~L-t~ig--------------pr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~v~vd~~~~~~g~~  145 (900)
                      +-.++.+|.++.+.+. +.+|              .|...|+++.++++|+.++++++|      .++++|         
T Consensus        10 ~l~in~~RL~~~l~e~~~~~g~~~~~g~~~~~~G~tRla~S~~d~~ar~~l~~~~~~~G------l~v~~D---------   74 (322)
T d1r3na1          10 PLSIASGRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLG------CKVKVD---------   74 (322)
T ss_dssp             CCCCCTTHHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHHT------CEEEEB---------
T ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCC------CEEEEE---------
T ss_conf             88719899999999999863652334778899975324499999999999999999869------989980---------


Q ss_pred             CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCE
Q ss_conf             23345445620111452469999827887857988799983046656999988981079999999999985269999708
Q 002613          146 RLVSGAFMGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAV  225 (900)
Q Consensus       146 ~~~gg~~~~~~~~y~~~~NViv~i~g~~~~~~~~~~ILl~aH~DSv~~spGA~DdgsGVA~lLE~aR~L~~~~~~p~~~I  225 (900)
                                     .+.|++++++|+    .+.+.|+++||+|||+.+ |..|+..||++.||++|.+.+.+.+|+++|
T Consensus        75 ---------------~~GNv~g~~~G~----~~~~~v~~GSHlDTVp~G-G~~DG~lGV~a~Levl~~l~e~~~~~~~~i  134 (322)
T d1r3na1          75 ---------------KIGNMFAVYPGK----NGGKPTATGSHLDTQPEA-GKYDGILGVLAGLEVLRTFKDNNYVPNYDV  134 (322)
T ss_dssp             ---------------TTSCEEEEECCS----SCSSCEEEEECCCCCSSB-CSSTTHHHHHHHHHHHHHHHHTTCCCSSCE
T ss_pred             ---------------CCCCEEEEECCC----CCCCCEEECCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             ---------------787689993488----889845741754457767-875774005999999998741046788991


Q ss_pred             EEEEECCCCCC-----CCCHHHHHH
Q ss_conf             99994699789-----854089987
Q 002613          226 IFLFNTGEEEG-----LNGAHSFVT  245 (900)
Q Consensus       226 iflf~~aEE~g-----L~GS~~fi~  245 (900)
                      .++.|.+||.+     +.||+.+..
T Consensus       135 ~vv~f~~EEg~rFg~~~lGS~~~~G  159 (322)
T d1r3na1         135 CVVVWFNEEGARFARSCTGSSVWSH  159 (322)
T ss_dssp             EEEECSCSSCSSBSSTTHHHHHHTT
T ss_pred             EEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf             7787405534654643232310157


No 14 
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]}
Probab=99.62  E-value=7.9e-15  Score=120.45  Aligned_cols=190  Identities=16%  Similarity=0.261  Sum_probs=137.3

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf             99999999998826999999988999999999999951101478401899966235786323345445620111452469
Q 002613           86 EFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHI  165 (900)
Q Consensus        86 ~erA~~~L~~Lt~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~v~vd~~~~~~g~~~~~gg~~~~~~~~y~~~~NV  165 (900)
                      .++..+.+++|.++ |.+.|.  .+++++||.++++++|      .++++|                        +..|+
T Consensus         3 ~~e~le~lk~L~~i-ps~Sg~--e~~~~~~i~~~l~~~G------~~~~~d------------------------~~gni   49 (233)
T d2grea2           3 TKETMELIKELVSI-PSPSGN--TAKIINFIENYVSEWN------VETKRN------------------------NKGAL   49 (233)
T ss_dssp             HHHHHHHHHHHHTS-CCBTTC--CHHHHHHHHHHTTTSS------SEEEEC------------------------SSSCE
T ss_pred             HHHHHHHHHHHHCC-CCCCCC--HHHHHHHHHHHHHHCC------CEEEEE------------------------CCCCE
T ss_conf             79999999999849-999988--9999999999999859------859996------------------------68878


Q ss_pred             EEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHH
Q ss_conf             99982788785798879998304665699998898107999999999998526999970899994699789854089987
Q 002613          166 VLRIQPKYASEAAENAILVSSHIDTVFAAEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVT  245 (900)
Q Consensus       166 iv~i~g~~~~~~~~~~ILl~aH~DSv~~spGA~DdgsGVA~lLE~aR~L~~~~~~p~~~Iiflf~~aEE~gL~GS~~fi~  245 (900)
                      +++++|+    .+.+.+++.+|+|+        ||.+||+++||++|.+.+.+.+|+++|.|+|+..||.|+.|++.+..
T Consensus        50 ia~~~G~----~~~~~i~~~aH~Dt--------~dk~g~a~~l~~~~~l~~~~~~~~~~i~~~ft~~EE~G~~Ga~~~~~  117 (233)
T d2grea2          50 ILTVKGK----NDAQHRLLTAHVDT--------LDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNIPE  117 (233)
T ss_dssp             EEEECCS----EEEEEEEEEEECCB--------CTHHHHHHHHHHHHHHHHHTCCCSEEEEEEEESCC----CCCCCCCT
T ss_pred             EEEECCC----CCCCCEEEEECCCC--------CCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHCC
T ss_conf             9971688----86441798841575--------55586999999999999779998845999998074337606775223


Q ss_pred             C-----------CC-------------------C-CHHHHHHHHHH---CCCCCCCHHHHHHHHCCCC-CCCCCHHHHHH
Q ss_conf             0-----------09-------------------9-70479998873---2899730234653216999-99984478742
Q 002613          246 Q-----------AG-------------------P-HPWAVENFAAA---AKYPSGQVTAQDLFASGAI-TSATDFQVYKE  290 (900)
Q Consensus       246 ~-----------~G-------------------p-~~~li~~y~~~---a~~P~~~~l~~~~f~~g~i-ps~TD~~~F~~  290 (900)
                      +           .+                   + ++++.+...+.   ...|+         |.... ..+||...+..
T Consensus       118 ~~~~~iavD~~~~~d~~~~~~~g~~i~~~d~~~~~~~~l~~~l~~~A~~~~I~~---------Q~~v~~~ggTDa~~~~~  188 (233)
T d2grea2         118 ETVEYLAVDMGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELAKTNHIEY---------KVDIYPYYGSDASAAIR  188 (233)
T ss_dssp             TEEEEEEECCCCCSCC--CCTTSEEEEEEETTEECCHHHHHHHHHHHHHHTCCE---------EEEECSCC--------C
T ss_pred             CCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCC---------EEEECCCCCCHHHHHHH
T ss_conf             885107999665789878899872799742766569999999999999839985---------79624887865999998


Q ss_pred             C-CCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             2-99808997542899989998899489998799999999999999
Q 002613          291 V-AGLSGLDFAYTDKSAVYHTKNDKLDLLKPGSLQHLGENMLAFLL  335 (900)
Q Consensus       291 ~-~gipgld~a~~~~~~~YHT~~Dt~~~i~~~slq~~g~~~l~lv~  335 (900)
                      . .|+|...++.  +-.+.||    ++.++.+.+.++.+.+.++++
T Consensus       189 ~g~gi~~~~i~~--p~ry~Hs----~E~~~~~di~~~~~Ll~a~~~  228 (233)
T d2grea2         189 AGFDVKHALIGA--GIDSSHA----FERTHESSIAHTEALVYAYVM  228 (233)
T ss_dssp             CSSSCEEEEEEE--CCBSTTS----SEEEEHHHHHHHHHHHHHHHH
T ss_pred             HCCCCCEEEECC--CCCCCCC----CEECCHHHHHHHHHHHHHHHH
T ss_conf             389997899733--7466654----501219999999999999983


No 15 
>d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]}
Probab=99.62  E-value=1.8e-14  Score=117.89  Aligned_cols=206  Identities=16%  Similarity=0.131  Sum_probs=145.3

Q ss_pred             HHHHHHHHHHHHCCC-------CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf             999999999882699-------9999988999999999999951101478401899966235786323345445620111
Q 002613           87 FEAIKHVKALTELGP-------HPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIY  159 (900)
Q Consensus        87 erA~~~L~~Lt~igp-------r~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~v~vd~~~~~~g~~~~~gg~~~~~~~~y  159 (900)
                      ++..+.|.+|.+|..       +...++++.++++||.++++++|      +++...                       
T Consensus         2 ~~~l~~l~~lv~i~S~S~~~~~~~p~~~~e~~~a~~l~~~l~~lG------~~~~~i-----------------------   52 (295)
T d1fnoa4           2 DKLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMG------LVNITL-----------------------   52 (295)
T ss_dssp             CSHHHHHHHHHTSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHT------CEEEEE-----------------------
T ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC------CEEEEE-----------------------
T ss_conf             789999998741366078865779898789999999999998779------989998-----------------------


Q ss_pred             CCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCC-------------------------------------------
Q ss_conf             4524699998278878579887999830466569999-------------------------------------------
Q 002613          160 SDLNHIVLRIQPKYASEAAENAILVSSHIDTVFAAEG-------------------------------------------  196 (900)
Q Consensus       160 ~~~~NViv~i~g~~~~~~~~~~ILl~aH~DSv~~spG-------------------------------------------  196 (900)
                      .+..|+++.+.+..  ....+.+++.+|+|+++...|                                           
T Consensus        53 d~~g~~~~~~~~~~--~~~~~~v~~~~H~Dtv~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~  130 (295)
T d1fnoa4          53 SEKGTLMATLPANV--EGDIPAIGFISHVDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLIT  130 (295)
T ss_dssp             CTTCCEEEEECCSS--CSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEE
T ss_pred             CCCCCEEEEECCCC--CCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCCEECCCCCCCCCCCCCCCCEEEECCCEEE
T ss_conf             78994899842437--9988636788995776776755317644004678731036654424702157825786784897


Q ss_pred             -------CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHCC-------------C--------
Q ss_conf             -------889810799999999999852699997089999469978985408998700-------------9--------
Q 002613          197 -------AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQA-------------G--------  248 (900)
Q Consensus       197 -------A~DdgsGVA~lLE~aR~L~~~~~~p~~~Iiflf~~aEE~gL~GS~~fi~~~-------------G--------  248 (900)
                             +.||.+|+++++|++|.+.+.+ .+..+|.|.|+..||.++.|++...+.-             |        
T Consensus       131 ~~g~~~~~~D~k~G~aa~l~a~~~l~~~~-~~~~~v~~~~t~~EE~~~gg~~~~~~~~~~~~~i~~D~~~~~~~~~~~~~  209 (295)
T d1fnoa4         131 TDGKTLLGADDKAGVAEIMTALAVLKGNP-IPHGDIKVAFTPDEEVGKGAKHFDVEAFGAQWAYTVDGGGVGELEFENNM  209 (295)
T ss_dssp             CCSSSCCCHHHHHHHHHHHHHHHHHHSSS-CCCCCEEEEEESCGGGTCTTTTCCHHHHCCSEEEECCCCSTTBEECCBCC
T ss_pred             CCCEEEECCCCHHHHHHHHHHHHHHHHCC-CCCCCEECCCCCCEECCCCHHHCCHHHCCCCEEEEECCCCCCCCCEEEEC
T ss_conf             79635433565156999999999998658-88886422332423347423011686708758999667776642001002


Q ss_pred             -----CCHHHHHHHHHH---CCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCH
Q ss_conf             -----970479998873---289973023465321699999984478742299808997542899989998899489998
Q 002613          249 -----PHPWAVENFAAA---AKYPSGQVTAQDLFASGAITSATDFQVYKEVAGLSGLDFAYTDKSAVYHTKNDKLDLLKP  320 (900)
Q Consensus       249 -----p~~~li~~y~~~---a~~P~~~~l~~~~f~~g~ips~TD~~~F~~~~gipgld~a~~~~~~~YHT~~Dt~~~i~~  320 (900)
                           +++++.+...+.   ...|         ++....++.||...|.. .|||.+++.. . ..++||++   |+++.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~i~---------~~~~~~~g~sD~~~~~~-~Gip~~~lg~-~-~~~~Ht~~---E~v~i  274 (295)
T d1fnoa4         210 REKVVEHPHILDIAQQAMRDCHIT---------PEMKPIRGGTDGAQLSF-MGLPCPNLFT-G-GYNYHGKH---EFVTL  274 (295)
T ss_dssp             HHHHHTSTHHHHHHHHHHHHTTCC---------CBCCCBSSCCHHHHHTT-TTCCCCEECC-S-EESTTSTT---CEEEH
T ss_pred             CCCCCCCHHHHHHHHHHHHHCCCC---------CEEEECCCCCHHHHHHH-CCCCEEEECC-C-CCCCCCCC---CEEEH
T ss_conf             434567779999999999863998---------46740689998999985-6998889852-8-74377885---08889


Q ss_pred             HHHHHHHHHHHHHHHHHHC
Q ss_conf             7999999999999999972
Q 002613          321 GSLQHLGENMLAFLLQAAS  339 (900)
Q Consensus       321 ~slq~~g~~~l~lv~~la~  339 (900)
                      +.+++..+.+..+++..+.
T Consensus       275 ~dl~~~~~ll~~~i~~~a~  293 (295)
T d1fnoa4         275 EGMEKAVQVIVRIAELTAK  293 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH
T ss_conf             9999999999999999964


No 16 
>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]}
Probab=99.30  E-value=4.3e-11  Score=93.49  Aligned_cols=125  Identities=18%  Similarity=0.255  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf             99999999998826999999988999999999999951101478401899966235786323345445620111452469
Q 002613           86 EFEAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHI  165 (900)
Q Consensus        86 ~erA~~~L~~Lt~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~v~vd~~~~~~g~~~~~gg~~~~~~~~y~~~~NV  165 (900)
                      +++..+.+++|.++ |  .-|+.++.+.+||.++++++|      .+++..  ..                   .+..|+
T Consensus         2 ~~e~lell~~Lv~i-~--S~s~~e~~~a~~l~~~l~~~G------~~~~~~--~~-------------------~~~~nv   51 (262)
T d1vgya1           2 ETQSLELAKELISR-P--SVTPDDRDCQKLMAERLHKIG------FAAEEM--HF-------------------GNTKNI   51 (262)
T ss_dssp             CSHHHHHHHHHHTS-C--CBTTCCTTHHHHHHHHHHTTT------CEEEEC--CB-------------------TTBCEE
T ss_pred             CHHHHHHHHHHHCC-C--CCCCCHHHHHHHHHHHHHHCC------CEEEEE--EE-------------------CCCCEE
T ss_conf             17999999999589-9--979897999999999999779------938999--81-------------------992579


Q ss_pred             EEEECCCCCCCCCCCEEEEEEECCCCCC---------------------CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             9998278878579887999830466569---------------------9998898107999999999998526999970
Q 002613          166 VLRIQPKYASEAAENAILVSSHIDTVFA---------------------AEGAGDCSSCVAVMLELARAMSQWAHGFKNA  224 (900)
Q Consensus       166 iv~i~g~~~~~~~~~~ILl~aH~DSv~~---------------------spGA~DdgsGVA~lLE~aR~L~~~~~~p~~~  224 (900)
                      +++..+      ..+.+++++|+|+||.                     ++|+.|+..++|++|.+++.+.+.+..++.+
T Consensus        52 ~~~~~~------~~~~l~l~~H~DtVp~g~~~~w~~~p~~~~~~dg~iyGrGa~D~Kg~~a~~l~a~~~l~~~~~~~~~~  125 (262)
T d1vgya1          52 WLRRGT------KAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGS  125 (262)
T ss_dssp             EEEECS------SSSEEEEEEECCBCCCCCGGGSSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSE
T ss_pred             EEEECC------CCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCC
T ss_conf             988269------99859887624423678653433466662998174575044146634799999999999736467887


Q ss_pred             EEEEEECC-CCCCCCCHHHHHHC
Q ss_conf             89999469-97898540899870
Q 002613          225 VIFLFNTG-EEEGLNGAHSFVTQ  246 (900)
Q Consensus       225 Iiflf~~a-EE~gL~GS~~fi~~  246 (900)
                      +.|+|... ||.+..|++.+.+.
T Consensus       126 ~~l~~~~dEE~~~~~G~~~l~~~  148 (262)
T d1vgya1         126 IALLITSDEEGDALDGTTKVVDV  148 (262)
T ss_dssp             EEEEEESCSSSCCTTSHHHHHHH
T ss_pred             EEEEEEECCCCCCCCCHHHHHHH
T ss_conf             59999965734613487999767


No 17 
>d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]}
Probab=99.26  E-value=1.6e-10  Score=89.30  Aligned_cols=126  Identities=16%  Similarity=0.163  Sum_probs=97.8

Q ss_pred             CCHHHHHHHHHHHHHCCCCCCCC----------HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCC
Q ss_conf             99999999999988269999999----------88999999999999951101478401899966235786323345445
Q 002613           84 FSEFEAIKHVKALTELGPHPVGS----------DALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFM  153 (900)
Q Consensus        84 fs~erA~~~L~~Lt~igpr~~GS----------~~~~~a~~yL~~~l~~ig~~~~~~~~v~vd~~~~~~g~~~~~gg~~~  153 (900)
                      -..+++.+.|++|.+|.. ..+.          ++..++.+++.+.+++.|      .+++.                  
T Consensus        11 ~~~d~~l~~l~~lv~i~S-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g------~~~~~------------------   65 (272)
T d1lfwa1          11 AKKDAILKDLEELIAIDS-SEDLENATEEYPVGKGPVDAMTKFLSFAKRDG------FDTEN------------------   65 (272)
T ss_dssp             TTHHHHHHHHHHHHTSCC-BCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTT------CEEEE------------------
T ss_pred             HHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC------CEEEE------------------
T ss_conf             989999999999957899-09884443112135689999999999999769------70266------------------


Q ss_pred             CCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCC--------------------CCCCCCCHHHHHHHHHHHHH
Q ss_conf             6201114524699998278878579887999830466569--------------------99988981079999999999
Q 002613          154 GRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHIDTVFA--------------------AEGAGDCSSCVAVMLELARA  213 (900)
Q Consensus       154 ~~~~~y~~~~NViv~i~g~~~~~~~~~~ILl~aH~DSv~~--------------------spGA~DdgsGVA~lLE~aR~  213 (900)
                              ..|++++....    ..++.|++.+|+|+|+.                    ++|+.|++.++++++++++.
T Consensus        66 --------~~~~~~~~~~g----~~~~~i~l~~H~DvVp~~~~W~~dPf~~~i~~dg~l~GrG~~D~k~~~~~~~~a~~~  133 (272)
T d1lfwa1          66 --------FANYAGRVNFG----AGDKRLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLL  133 (272)
T ss_dssp             --------ETTTEEEEEEC----CCSSEEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHH
T ss_pred             --------ECCEEEEEECC----CCCCEEEEEECCCEEECCCCCEECCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHH
T ss_conf             --------67668998737----999879998122526406871032443422245404632412354439999999999


Q ss_pred             HHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHC
Q ss_conf             985269999708999946997898540899870
Q 002613          214 MSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQ  246 (900)
Q Consensus       214 L~~~~~~p~~~Iiflf~~aEE~gL~GS~~fi~~  246 (900)
                      +.+.+.+++++|+|+|+..||.|..|++.|+++
T Consensus       134 l~~~~~~~~~~i~~~~~~~EE~g~~g~~~~~~~  166 (272)
T d1lfwa1         134 LKEAGFKPKKKIDFVLGTNEETNWVGIDYYLKH  166 (272)
T ss_dssp             HHHHTCCCSSEEEEEEESCTTTTCHHHHHHHHH
T ss_pred             HHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHH
T ss_conf             998589989888999975623488559999971


No 18 
>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]}
Probab=98.35  E-value=1.5e-05  Score=53.55  Aligned_cols=123  Identities=19%  Similarity=0.214  Sum_probs=86.3

Q ss_pred             HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf             99999999882699999998899999999999995110147840189996623578632334544562011145246999
Q 002613           88 EAIKHVKALTELGPHPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVL  167 (900)
Q Consensus        88 rA~~~L~~Lt~igpr~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~v~vd~~~~~~g~~~~~gg~~~~~~~~y~~~~NViv  167 (900)
                      +..+.-++|-+   +|--+-.+.++.+||.++|+++|      .++..    .        .          ...+++++
T Consensus         6 ~li~~rr~lh~---~PEl~~~E~~T~~~i~~~L~~~G------~~v~~----~--------~----------~~~tgv~a   54 (261)
T d1ysja1           6 RLINMRRDLHE---HPELSFQEVETTKKIRRWLEEEQ------IEILD----V--------P----------QLKTGVIA   54 (261)
T ss_dssp             HHHHHHHHHHH---SCCCTTCCHHHHHHHHHHHHHTT------CEECC----C--------T----------TCSSCEEE
T ss_pred             HHHHHHHHHHH---CCCCCCHHHHHHHHHHHHHHHCC------CEEEE----E--------C----------CCCEEEEE
T ss_conf             99999999996---71768838999999999999879------92899----5--------5----------77549999


Q ss_pred             EECCCCCCCCCCCEEEEEEECCCCCCC-----------CC---CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
Q ss_conf             982788785798879998304665699-----------99---8898107999999999998526999970899994699
Q 002613          168 RIQPKYASEAAENAILVSSHIDTVFAA-----------EG---AGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGE  233 (900)
Q Consensus       168 ~i~g~~~~~~~~~~ILl~aH~DSv~~s-----------pG---A~DdgsGVA~lLE~aR~L~~~~~~p~~~Iiflf~~aE  233 (900)
                      .+.+.    .+.+.|.+.++||..+..           +|   |...-.-.+++|-+++.+++...+++.+|+|+|.-||
T Consensus        55 ~~~g~----~~gp~Ialrad~DALp~~e~~~~~~~s~~~G~~HaCGHd~h~a~~lgaA~~l~~~~~~~~G~v~lifqPaE  130 (261)
T d1ysja1          55 EIKGR----EDGPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQPAE  130 (261)
T ss_dssp             EEECS----SCCCEEEEEEECCCBSCCCCCCCTTCCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEESCT
T ss_pred             EECCC----CCCCEEEEEECCCCCCHHHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
T ss_conf             98798----76745899733120110120467633256980531475017789999999999841357976999614672


Q ss_pred             CCCCCCHHHHHHC
Q ss_conf             7898540899870
Q 002613          234 EEGLNGAHSFVTQ  246 (900)
Q Consensus       234 E~gL~GS~~fi~~  246 (900)
                      |.+ .|+..++++
T Consensus       131 E~~-~Ga~~mi~~  142 (261)
T d1ysja1         131 EIA-AGARKVLEA  142 (261)
T ss_dssp             TTT-CHHHHHHHT
T ss_pred             CCC-CCHHHHHHC
T ss_conf             124-115779876


No 19 
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=98.32  E-value=5.6e-05  Score=49.43  Aligned_cols=109  Identities=15%  Similarity=0.231  Sum_probs=81.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCE
Q ss_conf             99999889999999999999511014784018999662357863233454456201114524699998278878579887
Q 002613          102 HPVGSDALDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVLRIQPKYASEAAENA  181 (900)
Q Consensus       102 r~~GS~~~~~a~~yL~~~l~~ig~~~~~~~~v~vd~~~~~~g~~~~~gg~~~~~~~~y~~~~NViv~i~g~~~~~~~~~~  181 (900)
                      +|--+-.+.++.+||.++|+++|      .+++..                       ...+.+++.+.+.     +.+.
T Consensus        25 ~PEl~~~E~~T~~~i~~~L~~~g------~~~~~~-----------------------~~~tg~~a~~~~~-----~~~~   70 (273)
T d1xmba1          25 NPELGYEELETSKLIRSELELIG------IKYRYP-----------------------VAITGVIGYIGTG-----EPPF   70 (273)
T ss_dssp             SCCCTTCCHHHHHHHHHHHHHHT------CCEEEE-----------------------ETTTEEEEEEESS-----SSCE
T ss_pred             CCCCCCCHHHHHHHHHHHHHHCC------CEEEEC-----------------------CCCEEEEEEECCC-----CCEE
T ss_conf             72757808999999999999879------869966-----------------------8765999998888-----6417


Q ss_pred             EEEEEECCCCCCC-----------CCC----CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHC
Q ss_conf             9998304665699-----------998----8981079999999999985269999708999946997898540899870
Q 002613          182 ILVSSHIDTVFAA-----------EGA----GDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQ  246 (900)
Q Consensus       182 ILl~aH~DSv~~s-----------pGA----~DdgsGVA~lLE~aR~L~~~~~~p~~~Iiflf~~aEE~gL~GS~~fi~~  246 (900)
                      |.+-|++|..+..           +|.    +.| .-++++|-+++.|++...+++.+|+|+|..|||.+ .|+...+++
T Consensus        71 i~~rad~Dalp~~e~~~~~~~s~~~g~~HaCGHd-~h~a~~l~aa~~l~~~~~~~~g~v~~ifqPaEE~~-~Ga~~mi~~  148 (273)
T d1xmba1          71 VALRADMDALPIQEGVEWEHKSKIAGKMHACGHD-GHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGL-SGAKKMREE  148 (273)
T ss_dssp             EEEEEECCCBSCCCCCCSTTCCSSTTCBCCSSHH-HHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTTTT-CHHHHHHHT
T ss_pred             EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC-CCHHHHHHC
T ss_conf             8984252446542246764456788864566663-07789999999999855147972899973332345-541579874


No 20 
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=98.05  E-value=2.8e-06  Score=58.78  Aligned_cols=126  Identities=23%  Similarity=0.242  Sum_probs=81.0

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHC-------------C--------------
Q ss_conf             9988981079999999999985269999708999946997898540899870-------------0--------------
Q 002613          195 EGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSFVTQ-------------A--------------  247 (900)
Q Consensus       195 pGA~DdgsGVA~lLE~aR~L~~~~~~p~~~Iiflf~~aEE~gL~GS~~fi~~-------------~--------------  247 (900)
                      ..|-||.+||+++||++|.+++    ++.++.|+|+..||.|+.||+....+             +              
T Consensus        15 s~alDdr~g~~~lle~l~~lk~----~~~~l~~vft~qEEvG~rGA~~~a~~i~p~~~i~~d~~~a~D~~~~~~~~~~~~   90 (255)
T d1y0ya2          15 SIAFDDRIAVYTILEVAKQLKD----AKADVYFVATVQEEVGLRGARTSAFGIEPDYGFAIDVTIAADIPGTPEHKQVTH   90 (255)
T ss_dssp             ETTHHHHHHHHHHHHHHHHCCS----CSSEEEEEEESCCTTTSHHHHHHHHHHCCSEEEEEEEEECCCSTTCCGGGCCCC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHC----CCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCC
T ss_conf             1543448999999999998604----698389999744335777524555442022020035664367888761213655


Q ss_pred             ---CC-----------CHHHHHHHHH---HCCCCCCCHHHHHHHHCCC-CCCCCCHHH--HHHCCCCCEEEEEECCCCCC
Q ss_conf             ---99-----------7047999887---3289973023465321699-999984478--74229980899754289998
Q 002613          248 ---GP-----------HPWAVENFAA---AAKYPSGQVTAQDLFASGA-ITSATDFQV--YKEVAGLSGLDFAYTDKSAV  307 (900)
Q Consensus       248 ---Gp-----------~~~li~~y~~---~a~~P~~~~l~~~~f~~g~-ips~TD~~~--F~~~~gipgld~a~~~~~~~  307 (900)
                         ||           ++.+.+...+   ....|+         |... ..+.||-..  +.. .|+|.++++.-  -.+
T Consensus        91 lg~G~~I~~~d~~~~~~~~l~~~l~~~a~~~~ip~---------Q~~~~~~gGtd~~~i~~~~-~Gi~t~~igiP--~ry  158 (255)
T d1y0ya2          91 LGKGTAIKIMDRSVICHPTIVRWLEELAKKHEIPY---------QLEILLGGGTDAGAIHLTK-AGVPTGALSVP--ARY  158 (255)
T ss_dssp             TTSCEEEEEEETTEECCHHHHHHHHHHHHHTTCCE---------EEEECSSCCCTHHHHTTST-TCCCEEEEEEE--EBS
T ss_pred             CCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCE---------EEECCCCCCCCHHHHHHHC-CCCCEEEECCC--CCC
T ss_conf             67762488526885689999999999999829973---------9942668886089999847-99878996324--046


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf             99988994899987999999999999999972
Q 002613          308 YHTKNDKLDLLKPGSLQHLGENMLAFLLQAAS  339 (900)
Q Consensus       308 YHT~~Dt~~~i~~~slq~~g~~~l~lv~~la~  339 (900)
                      +||++++.   +...++++.+.+.++++.|-.
T Consensus       159 mHS~~E~~---~~~Di~~~~kLl~~~l~~l~e  187 (255)
T d1y0ya2         159 IHSNTEVV---DERDVDATVELMTKALENIHE  187 (255)
T ss_dssp             CSSSCEEE---EHHHHHHHHHHHHHHHHHGGG
T ss_pred             CCCHHHEE---EHHHHHHHHHHHHHHHHHHHH
T ss_conf             76655415---699999999999999987324


No 21 
>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]}
Probab=93.27  E-value=0.012  Score=32.66  Aligned_cols=114  Identities=18%  Similarity=0.150  Sum_probs=70.8

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEC
Q ss_conf             99999999999995110147840189996623578632334544562011145246999982788785798879998304
Q 002613          109 LDRALQYVFAAAQKIKETKHWEVDVEVDFFHAKSGANRLVSGAFMGRTLIYSDLNHIVLRIQPKYASEAAENAILVSSHI  188 (900)
Q Consensus       109 ~~~a~~yL~~~l~~ig~~~~~~~~v~vd~~~~~~g~~~~~gg~~~~~~~~y~~~~NViv~i~g~~~~~~~~~~ILl~aH~  188 (900)
                      .-.+++++.+.+++-|.+...+.    +.+..       .+++|     ...+...+++-..|+.  ...+..-+++||.
T Consensus        32 ~~hav~~~~~~L~~~GF~~l~e~----~~~~~-------g~k~y-----~~~~~~sliaf~iG~~--~~~~G~~iigaHt   93 (322)
T d1y7ea2          32 EREVTAYALDKAKKLGFINAEEK----KNLMP-------GDKIF-----YTCREKSVAFAIIGKN--PIEDGMNFIVSHT   93 (322)
T ss_dssp             HHHHHHHHHHHHHTTTCEESTTC----CCCCT-------TCEEE-----CBCSSSCBCCEECCSS--CGGGCCEECCCBC
T ss_pred             HHHHHHHHHHHHHHCCCEECCCC----CCCCC-------CCEEE-----EEECCCEEEEEEECCC--CCCCCEEEEEEEC
T ss_conf             89999999999998749677877----75668-------99699-----9907978999991897--7667869999725


Q ss_pred             CCCCC---------------CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHH
Q ss_conf             66569---------------99988981079999999999985269999708999946997898540899
Q 002613          189 DTVFA---------------AEGAGDCSSCVAVMLELARAMSQWAHGFKNAVIFLFNTGEEEGLNGAHSF  243 (900)
Q Consensus       189 DSv~~---------------spGA~DdgsGVA~lLE~aR~L~~~~~~p~~~Iiflf~~aEE~gL~GS~~f  243 (900)
                      ||...               +-+.-||-.||-+.||.+.   +....+....+++++|-||.|..|+++-
T Consensus        94 DSPr~~a~~~~~~G~d~efi~s~rlDd~~~~~~~l~Ali---~~~~~~~~~~v~~~~D~EEIGS~s~~GA  160 (322)
T d1y7ea2          94 DSPRVPAGTAKDVGFDKALIGAYGQDDKICVFTSLESIF---DLEETPNKTAICFLVDKEEIGSTGSTGL  160 (322)
T ss_dssp             CCCBEECSCCEEETTTTCEEEESSHHHHHHHHHHHHHHS---SSSCCCSSCEECCCBCSTTC--------
T ss_pred             CCCCHHHCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHH---HHHCCCCCEEEEEEECCCCCCCCCCCCC
T ss_conf             899603234210015642562468745888999999998---4340799659999963421477760135


Done!